Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0008303

Physical Location & Seq

Genomic Coordinates Forward (+)

60205999 .. 60214053

Gene Structure 8055 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG287900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2574 bp

ATGGACGGAGGAAGATATTCGTTATGTACACATACGAGTCACTGTGTTCATGACATAGTTTCTAGTTTTGAACTGTACAGGAATTATGCAGTCCTTGATTGCTTTTTTGGTTGTTCTCATAAGCAGATACAGGGCATGGAGGACAGTGCCGAGTCATTGAGGGAGAGAAGTTTAAGGTTTTACAAAGGATGTCGAAAATACACTGAAGGTCTTGGGGAAGCTTATGATGGGGACATTGCTTTTGCTAGTGCCCTAGAAACATTTGGTGGGGGGCATAATGATCCAATTAGTGTTGCTTTTGGAGGCCCTGTTATGACCAAATTTACTATCGCATTAAGAGAAATTGGGACATACAAGGAAGTTCTTCGTTCCCAGGTTGAGCATATGCTAAATGACAGATTGTTACAATTTGTGAATTTTGATTTGCATGAGGTCAAGGAAGCGCGAAAACGGTTTGACAAGGCTAGCCTTCTTTATGACCAGGCTCGCGAAAAATTTCTCTCACTGAGAAAAGGAACAAGGAATGATGTAGCCACCATGGTAGAGGAGGAGCTTCATAATGCAAGGTCTACATTTGAGCAAGCTCGTTTTAGTCTTGTGACTGCTCTTTCTACTGTTGAAGCAAAAAAGAGGTTTGAGTTTCTGGAAGCGGTCAGTGGGACAATGGATGCCCATCTTCGTTACTTCAAACAGGGTTATGAGTTGTTGCATCAAATGGAACCCTATATTAATCAGGTCTTGACTTATGCTCAACAGTCAAGAGAAAGATCCAACTATGAACAGGCAGCTCTTAATGAAAGGATGCAAGATTACAAAAGACAGGTCGATAGAGAGAGTAGGTGGTCGTCCAATGATTCTAATGGGTCTCCTAATGGAGATGGGATACAAGCTATTGGTAGAAGTTCACATAAAATGATCGAGGCTGTTATGCAATCTGCTGCAAAGGGAAAGGTTCAAACCATTAGGCAAGGTTATCTCTCAAAGAGGTCCTCAAACTTGAGGGGTGACTGGAAAAGAAGATTTTTTGTACTTGATAGCCGAGGAATGCTCTATTACTATCGGAAACAAATCAGCAAATCATCTGGCTCTGGTAGTCAACTTTCTGGTCAGAGGAATAGTTCTGAGCTTGGTTCTGGACTGTTGAGTCGCTGGCTTTCTTCTCATTATCATGGTGGAGTGCATGATGAGAAATCTGTTGCTCATCACACAGTGAATCTGCTTACATCAACAATCAAAGTTGACGCTGACCAGTCGGACCTAAGATTTTGTTTCAGGATCATTTCACCAACAAAGAACTATACTTTGCAGGCAGAGAGCGCACTTGATCAAATGGATTGGATTGAAAAGATAACGGGGGTTATTGCTTCATTACTTAGCTCTCAGGCTCCTGAGAGGTTTCTGCCTGCTAGTCCCATGGGAAGCCATCGTCGTTCTGCCAGTGAGAGTAGTTCGTTTGAGAGTTCTGATTTTGATCACACTGCAGTTGAAGAACTTGCATCGGACAGAAGCCTGAATAATGCTGACCACCGCCAATTAAGAAGTTCGCAACAGCAACGGTCTTCTTTAAGAAGTGAGAAGACAATTGACACTCTACGACGAGTATGTGGGAATGATAAATGTGCTGATTGTGGTGCCCCTGAGCCAGATTGGGCATCATTAAATCTTGGCGTTCTTGTTTGCATCGAATGTTCTGGTGTTCATCGTAATCTTGGTGTTCATATCTCAAAGGTAAGGTCTCTGACACTGGATGTCAAAGTATGGGAGCCTTCTGTCATTAATTTGTTTCAGTCATTGGGTAATGCCTTTGCAAACTCTGTCTGGGAGGAACTTTTGCAATCAAGAAGTGCTTTTCAGCTTGATCTTATAGCCACAGGGTCACATAAATCTGATAAAACACAGCTAGTTTTTATCAGCAAACCCAATCAGACTGATTCAATATCGGTAAAGGAGAAATTCATTCATGCAAAGTACGCAGACAAGCTTTTTGTAAGGAGGCCAAAGGATGGACAGTATACTCATTTAGTGGCACAACAGATTTGGGAGGGTGTTCGTGCTAATGACAAGAAAGCTGTGTATCGTCACATTGTTAATTCTGAACCAGACGTGAATGCGGTGTATGAGCAAGCCTCGTGTGGCTCTTCCTTAACCCTTGCAAAAGTAATGCTGATGCAAGAGCAGACTAGCCATGACCAAAGCTCTAGCTGCTTAGCTGGGGATTCATTGGAGAGGTCTTCTGGTAGTTCTTCAAACTTGAGTGGTACAAGTGAAGTCCAGGCTATGGAGGATCTCGACGGGTGCACCCTTCTTCACCTTGCTTGTGAAACTGCAGACATTGGTATGCTTGAACTGCTCCTACAATATGGAGCAAATGTAAATGCGACTGATTCAAGAGGTCAAACACCACTCGACCGATGTATTCTCAAGGGCAGAAACACATTTGCAAAATTGCTTCTTACAAGGGGAGCGGATCCACGAGCACTAAATGGGGAAGGTAAAACCCCCCTTGAGCTGGCAGTTGAGTCGAACTTTGATGATGGCGAGGTCCTTTCTATATTATCAGACTCCCGTGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0005096 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005798 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0007275 GO:0007389 GO:0008047 GO:0008150 GO:0008289 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009888 GO:0009965 GO:0010016 GO:0010033 GO:0010051 GO:0010087 GO:0012505 GO:0016020 GO:0016192 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030234 GO:0030695 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0035091 GO:0042221 GO:0043085 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050790 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0097708 GO:0098657 GO:0098772 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 Ank_5 ArfGap BAR_3 PH Pkinase

Protein Analysis

857

Amino Acids

95.77

Weight (kDa)

6.63

Isoelectric Point (pI)

53.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAR_3	PF16746	41 - 262	2.8e-33	BAR domain of APPL family
BAR	PF03114	80 - 243	3.1e-12	BAR domain
PH	PF00169	321 - 454	9.4e-12	PH domain
ArfGap	PF01412	526 - 664	5.3e-32	Putative GTPase activating protein for Arf
Ank_2	PF12796	761 - 825	3.5e-10	Ankyrin repeats (3 copies)
Ank_5	PF13857	762 - 804	1.1e-07	Ankyrin repeats (many copies)
Ank	PF00023	764 - 795	4.6e-07	Ankyrin repeat
Ank_4	PF13637	769 - 818	5.2e-07	Ankyrin repeats (many copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0008303)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13300
fragaria_vesca	FvH4_4g22770 FvH4_4g22770
malus_domestica	MD13G1129800.v1.1 MD16G1130100.v1.1
prunus_persica	Prupe.1G216500_v2.0.a1
pyrus_communis	pycom13g11290 pycom16g11080
rosa_chinensis	RchiOBHm_Chr4g0428991
rosa_laevigata	RLG00000007106
rosa_multiflora	Rmu_sc0008629.1_g000014
rosa_roxburghii	Rroxscaffold_5G00370650
rosa_rugosa	Rorug04G0231400 Rorug04G0231500 Rorug04G0231600 Rorug04G0231700 Rorug04G0231800
rosa_samantha	Rh4AG287900 Rh4BG293900 Rh4CG309500 Rh4DG290900
rosa_wichuraiana	Rw0G014080 Rw4G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1143
AccB1I	GGYRCC	1 cut(s)	1631
AccB7I	CCANNNNNTGG	2 cut(s)	2003, 2278
AccBSI	CCGCTC	1 cut(s)	2465
AccI	GTMKAC	2 cut(s)	569, 2012
AccII	CGCG	2 cut(s)	445, 489
AciI	CCGC	4 cut(s)	650, 1528, 2111, 2465
AclWI	GGATC	6 cut(s)	275, 762, 1283, 2292, 2462, 2475
AcsI	RAATTY	4 cut(s)	320, 415, 494, 1952
AcuI	CTGAAG	1 cut(s)	225
AdeI	CACNNNGTG	1 cut(s)	1210
AfaI	GTAC	5 cut(s)	28, 77, 1029, 1970, 2260
AfiI	CCNNNNNNNGG	3 cut(s)	2003, 2278, 2509
AjiI	CACGTC	1 cut(s)	2104
AjnI	CCWGG	3 cut(s)	372, 480, 2271
Alw21I	GWGCWC	2 cut(s)	2300, 2479
Alw26I	GTCTC	2 cut(s)	870, 1740
Alw44I	GTGCAC	1 cut(s)	2296
AlwI	GGATC	6 cut(s)	275, 762, 1283, 2292, 2462, 2475
AoxI	GGCC	2 cut(s)	304, 1994
ApaLI	GTGCAC	1 cut(s)	2296
ApeKI	GCWGC	3 cut(s)	785, 938, 2202
ApoI	RAATTY	4 cut(s)	320, 415, 494, 1952
ArsI	GACNNNNNNTTYG	8 cut(s)	224, 256, 807, 839, 1718, 1750, 1967, 1999
AseI	ATTAAT	2 cut(s)	729, 1776
Asp700I	GAANNNNTTC	3 cut(s)	16, 363, 495
AspLEI	GCGC	2 cut(s)	445, 1319
AspS9I	GGNCC	4 cut(s)	305, 987, 1255, 2542
AsuHPI	GGTGA	3 cut(s)	1016, 1275, 2300
AsuNHI	GCTAGC	1 cut(s)	464
AvaII	GGWCC	3 cut(s)	987, 1255, 2542
BaeGI	GKGCMC	3 cut(s)	253, 1636, 2300
BamHI	GGATCC	1 cut(s)	2467
BanI	GGYRCC	1 cut(s)	1631
BauI	CACGAG	2 cut(s)	2128, 2472
BbsI	GAAGAC	3 cut(s)	1551, 1583, 2223
Bbv12I	GWGCWC	2 cut(s)	2300, 2479
BbvI	GCAGC	3 cut(s)	797, 925, 2189
BccI	CCATC	6 cut(s)	221, 681, 872, 1431, 1997, 2528
BcgI	CGANNNNNNTGC	2 cut(s)	2502, 2536
BciT130I	CCWGG	3 cut(s)	374, 482, 2273
BciVI	GTATCC	1 cut(s)	876
BclI	TGATCA	2 cut(s)	1324, 1471
BcoDI	GTCTC	2 cut(s)	870, 1740
BfaI	CTAG	8 cut(s)	63, 246, 254, 465, 1407, 1901, 2181, 2199
BfmI	CTRYAG	2 cut(s)	1479, 2325
BfuI	GTATCC	1 cut(s)	876
BisI	GCNGC	3 cut(s)	786, 939, 2203
BlpI	GCTNAGC	1 cut(s)	2206
BlsI	GCNGC	3 cut(s)	787, 940, 2204
Bme1390I	CCNGG	3 cut(s)	374, 482, 2273
Bme18I	GGWCC	3 cut(s)	987, 1255, 2542
BmgBI	CACGTC	1 cut(s)	2104
BmgT120I	GGNCC	4 cut(s)	305, 987, 1255, 2542
BmiI	GGNNCC	5 cut(s)	720, 1386, 1633, 1764, 2469
BmrFI	CCNGG	3 cut(s)	374, 482, 2273
BmsI	GCATC	7 cut(s)	658, 718, 792, 1505, 1661, 1689, 2157
BmtI	GCTAGC	1 cut(s)	468
BpiI	GAAGAC	3 cut(s)	1551, 1583, 2223
BplI	GAGNNNNNCTC	4 cut(s)	1032, 1064, 2111, 2143
Bpu10I	CCTNAGC	1 cut(s)	1638
Bpu1102I	GCTNAGC	1 cut(s)	2206
BpuEI	CTTGAG	4 cut(s)	1018, 2272, 2405, 2525
BsaBI	GATNNNNATC	2 cut(s)	672, 1470
BsaI	GGTCTC	2 cut(s)	870, 1740
BsaJI	CCNNGG	5 cut(s)	372, 537, 1039, 1413, 2566
BsaXI	ACNNNNNCTCC	4 cut(s)	294, 324, 2355, 2385
Bsc4I	CCNNNNNNNGG	3 cut(s)	2003, 2278, 2509
Bse1I	ACTGG	4 cut(s)	1013, 1249, 1437, 1749
Bse3DI	GCAATG	1 cut(s)	234
Bse8I	GATNNNNATC	2 cut(s)	672, 1470
BseBI	CCWGG	3 cut(s)	374, 482, 2273
BseDI	CCNNGG	5 cut(s)	372, 537, 1039, 1413, 2566
BseGI	GGATG	5 cut(s)	194, 673, 807, 1753, 2008
BseJI	GATNNNNATC	2 cut(s)	672, 1470
BseLI	CCNNNNNNNGG	3 cut(s)	2003, 2278, 2509
BseMI	GCAATG	1 cut(s)	234
BseMII	CTCAG	5 cut(s)	497, 1113, 1380, 1394, 1629
BseNI	ACTGG	4 cut(s)	1013, 1249, 1437, 1749
BseRI	GAGGAG	2 cut(s)	560, 563
BseSI	GKGCMC	3 cut(s)	253, 1636, 2300
BseXI	GCAGC	3 cut(s)	797, 925, 2189
BseYI	CCCAGC	1 cut(s)	2210
Bsh1236I	CGCG	2 cut(s)	445, 489
Bsh1285I	CGRYCG	1 cut(s)	2410
BshFI	GGCC	2 cut(s)	306, 1996
BshNI	GGYRCC	1 cut(s)	1631
BsiEI	CGRYCG	1 cut(s)	2410
BsiHKAI	GWGCWC	2 cut(s)	2300, 2479
BslFI	GGGAC	4 cut(s)	245, 361, 673, 1395
BslI	CCNNNNNNNGG	3 cut(s)	2003, 2278, 2509
BsmAI	GTCTC	2 cut(s)	870, 1740
BsmFI	GGGAC	4 cut(s)	245, 361, 673, 1395
BsmI	GAATGC	2 cut(s)	1050, 2113
BsnI	GGCC	2 cut(s)	306, 1996
Bso31I	GGTCTC	2 cut(s)	870, 1740
Bsp1286I	GDGCHC	4 cut(s)	253, 1636, 2300, 2479
Bsp1407I	TGTACA	2 cut(s)	26, 75
Bsp143I	GATC	9 cut(s)	280, 767, 915, 1275, 1324, 1471, 1858, 2284, 2467
Bsp1720I	GCTNAGC	1 cut(s)	2206
Bsp19I	CCATGG	2 cut(s)	537, 1413
Bsp68I	TCGCGA	1 cut(s)	489
BspACI	CCGC	4 cut(s)	650, 1528, 2111, 2465
BspANI	GGCC	2 cut(s)	306, 1996
BspCNI	CTCAG	5 cut(s)	498, 1114, 1381, 1393, 1630
BspFNI	CGCG	2 cut(s)	445, 489
BspHI	TCATGA	1 cut(s)	49
BspLI	GGNNCC	5 cut(s)	720, 1386, 1633, 1764, 2469
BspMAI	CTGCAG	2 cut(s)	1483, 2329
BspOI	GCTAGC	1 cut(s)	468
BspPI	GGATC	6 cut(s)	275, 762, 1283, 2292, 2462, 2475
BspQI	GCTCTTC	1 cut(s)	2143
BspT107I	GGYRCC	1 cut(s)	1631
BspTNI	GGTCTC	2 cut(s)	870, 1740
BsrBI	CCGCTC	1 cut(s)	2465
BsrDI	GCAATG	1 cut(s)	234
BsrGI	TGTACA	2 cut(s)	26, 75
BsrI	ACTGG	4 cut(s)	1013, 1249, 1437, 1749
BssECI	CCNNGG	5 cut(s)	372, 537, 1039, 1413, 2566
BssMI	GATC	9 cut(s)	280, 767, 915, 1275, 1324, 1471, 1858, 2284, 2467
BssNAI	GTATAC	1 cut(s)	2013
BssSI	CACGAG	2 cut(s)	2128, 2472
BssT1I	CCWWGG	2 cut(s)	537, 1413
Bst1107I	GTATAC	1 cut(s)	2013
Bst2BI	CACGAG	2 cut(s)	2128, 2472
Bst2UI	CCWGG	3 cut(s)	374, 482, 2273
Bst6I	CTCTTC	1 cut(s)	2143
BstAUI	TGTACA	2 cut(s)	26, 75
BstC8I	GCNNGC	8 cut(s)	466, 487, 582, 1151, 1308, 1404, 2124, 2511
BstDEI	CTNAG	8 cut(s)	506, 1122, 1259, 1373, 1380, 1389, 1638, 2206
BstDSI	CCRYGG	3 cut(s)	537, 1413, 2566
BstF5I	GGATG	5 cut(s)	194, 673, 807, 1753, 2008
BstFNI	CGCG	2 cut(s)	445, 489
BstHHI	GCGC	2 cut(s)	445, 1319
BstKTI	GATC	9 cut(s)	283, 770, 918, 1278, 1327, 1474, 1861, 2287, 2470
BstMAI	GTCTC	2 cut(s)	870, 1740
BstMBI	GATC	9 cut(s)	280, 767, 915, 1275, 1324, 1471, 1858, 2284, 2467
BstMCI	CGRYCG	1 cut(s)	2410
BstMWI	GCNNNNNNNGC	4 cut(s)	1316, 1970, 2202, 2347
BstNI	CCWGG	3 cut(s)	374, 482, 2273
BstSCI	CCNGG	3 cut(s)	372, 480, 2271
BstSFI	CTRYAG	2 cut(s)	1479, 2325
BstSLI	GKGCMC	3 cut(s)	253, 1636, 2300
BstUI	CGCG	2 cut(s)	445, 489
BstV1I	GCAGC	3 cut(s)	797, 925, 2189
BstV2I	GAAGAC	3 cut(s)	1551, 1583, 2223
BstX2I	RGATCY	3 cut(s)	767, 2284, 2467
BstYI	RGATCY	3 cut(s)	767, 2284, 2467
BstZ17I	GTATAC	1 cut(s)	2013
BsuI	GTATCC	1 cut(s)	876
BsuRI	GGCC	2 cut(s)	306, 1996
BtgI	CCRYGG	3 cut(s)	537, 1413, 2566
BtrI	CACGTC	1 cut(s)	2104
BtsCI	GGATG	5 cut(s)	194, 673, 807, 1753, 2008
BtsI	GCAGTG	1 cut(s)	1476
BtsIMutI	CAGTG	9 cut(s)	40, 151, 201, 503, 661, 1215, 1444, 1476, 1742
BtuMI	TCGCGA	1 cut(s)	489
Cac8I	GCNNGC	8 cut(s)	466, 487, 582, 1151, 1308, 1404, 2124, 2511
CciI	TCATGA	1 cut(s)	49
CfoI	GCGC	2 cut(s)	445, 1319
Cfr13I	GGNCC	4 cut(s)	305, 987, 1255, 2542
CseI	GACGC	1 cut(s)	1250
Csp6I	GTAC	5 cut(s)	27, 76, 1028, 1969, 2259
CviAII	CATG	9 cut(s)	50, 136, 428, 538, 1169, 1181, 1414, 1961, 2186
CviQI	GTAC	5 cut(s)	27, 76, 1028, 1969, 2259
DdeI	CTNAG	8 cut(s)	506, 1122, 1259, 1373, 1380, 1389, 1638, 2206
DpnI	GATC	9 cut(s)	282, 769, 917, 1277, 1326, 1473, 1860, 2286, 2469
DpnII	GATC	9 cut(s)	280, 767, 915, 1275, 1324, 1471, 1858, 2284, 2467
DraIII	CACNNNGTG	1 cut(s)	1210
DrdI	GACNNNNNNGTC	1 cut(s)	1143
DseDI	GACNNNNNNGTC	1 cut(s)	1143
Eam1104I	CTCTTC	1 cut(s)	2143
EarI	CTCTTC	1 cut(s)	2143
Eco130I	CCWWGG	2 cut(s)	537, 1413
Eco31I	GGTCTC	2 cut(s)	870, 1740
Eco47I	GGWCC	3 cut(s)	987, 1255, 2542
Eco57I	CTGAAG	1 cut(s)	225
EcoO109I	RGGNCCY	3 cut(s)	305, 987, 2542
EcoRII	CCWGG	3 cut(s)	372, 480, 2271
EcoT14I	CCWWGG	2 cut(s)	537, 1413
ErhI	CCWWGG	2 cut(s)	537, 1413
FaeI	CATG	9 cut(s)	53, 139, 431, 541, 1172, 1184, 1417, 1964, 2189
FalI	AAGNNNNNCTT	2 cut(s)	1831, 1863
FaqI	GGGAC	4 cut(s)	245, 361, 673, 1395
FatI	CATG	9 cut(s)	49, 135, 427, 537, 1168, 1180, 1413, 1960, 2185
FauNDI	CATATG	1 cut(s)	384
FbaI	TGATCA	2 cut(s)	1324, 1471
FblI	GTMKAC	2 cut(s)	569, 2012
Fnu4HI	GCNGC	3 cut(s)	786, 939, 2203
FokI	GGATG	5 cut(s)	201, 680, 814, 1760, 2015
Fsp4HI	GCNGC	3 cut(s)	786, 939, 2203
FspBI	CTAG	8 cut(s)	63, 246, 254, 465, 1407, 1901, 2181, 2199
GlaI	GCGC	2 cut(s)	444, 1318
GluI	GCNGC	3 cut(s)	786, 939, 2203
GsaI	CCCAGC	1 cut(s)	2214
HaeIII	GGCC	2 cut(s)	306, 1996
HgaI	GACGC	1 cut(s)	1250
HhaI	GCGC	2 cut(s)	445, 1319
Hin1II	CATG	9 cut(s)	53, 139, 431, 541, 1172, 1184, 1417, 1964, 2189
Hin6I	GCGC	2 cut(s)	443, 1317
HinP1I	GCGC	2 cut(s)	443, 1317
HincII	GTYRAC	2 cut(s)	1097, 1240
HindII	GTYRAC	2 cut(s)	1097, 1240
HindIII	AAGCTT	2 cut(s)	219, 1979
HphI	GGTGA	3 cut(s)	1016, 1275, 2300
Hpy166II	GTNNAC	7 cut(s)	29, 570, 905, 1097, 1240, 2013, 2298
Hpy8I	GTNNAC	7 cut(s)	29, 570, 905, 1097, 1240, 2013, 2298
Hpy99I	CGWCG	3 cut(s)	1431, 1599, 2294
HpyAV	CCTTC	5 cut(s)	200, 479, 1776, 2312, 2483
HpyCH4IV	ACGT	1 cut(s)	2103
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1316, 1970, 2202, 2347
HpyF3I	CTNAG	8 cut(s)	506, 1122, 1259, 1373, 1380, 1389, 1638, 2206
HpySE526I	ACGT	1 cut(s)	2103
Hsp92II	CATG	9 cut(s)	53, 139, 431, 541, 1172, 1184, 1417, 1964, 2189
HspAI	GCGC	2 cut(s)	443, 1317
Ksp22I	TGATCA	2 cut(s)	1324, 1471
Kzo9I	GATC	9 cut(s)	280, 767, 915, 1275, 1324, 1471, 1858, 2284, 2467
LguI	GCTCTTC	1 cut(s)	2143
LmnI	GCTCC	6 cut(s)	550, 1390, 1762, 2355, 2363, 2462
Lsp1109I	GCAGC	3 cut(s)	797, 925, 2189
LweI	GCATC	7 cut(s)	658, 718, 792, 1505, 1661, 1689, 2157
MaeI	CTAG	8 cut(s)	63, 246, 254, 465, 1407, 1901, 2181, 2199
MaeII	ACGT	1 cut(s)	2103
MaeIII	GTNAC	7 cut(s)	38, 402, 598, 680, 1004, 1875, 2078
MalI	GATC	9 cut(s)	282, 769, 917, 1277, 1326, 1473, 1860, 2286, 2469
MbiI	CCGCTC	1 cut(s)	2465
MboI	GATC	9 cut(s)	280, 767, 915, 1275, 1324, 1471, 1858, 2284, 2467
MfeI	CAATTG	1 cut(s)	1581
MflI	RGATCY	3 cut(s)	767, 2284, 2467
MhlI	GDGCHC	4 cut(s)	253, 1636, 2300, 2479
MlyI	GAGTC	5 cut(s)	46, 161, 1153, 2528, 2555
MmeI	TCCRAC	2 cut(s)	795, 1233
MroXI	GAANNNNTTC	3 cut(s)	16, 363, 495
MslI	CAYNNNNRTG	2 cut(s)	1167, 2336
MspR9I	CCNGG	3 cut(s)	374, 482, 2273
MunI	CAATTG	1 cut(s)	1581
Mva1269I	GAATGC	2 cut(s)	1050, 2113
MvaI	CCWGG	3 cut(s)	374, 482, 2273
MvnI	CGCG	2 cut(s)	445, 489
MwoI	GCNNNNNNNGC	4 cut(s)	1316, 1970, 2202, 2347
NcoI	CCATGG	2 cut(s)	537, 1413
NdeI	CATATG	1 cut(s)	384
NdeII	GATC	9 cut(s)	280, 767, 915, 1275, 1324, 1471, 1858, 2284, 2467
NheI	GCTAGC	1 cut(s)	464
NlaIII	CATG	9 cut(s)	53, 139, 431, 541, 1172, 1184, 1417, 1964, 2189
NlaIV	GGNNCC	5 cut(s)	720, 1386, 1633, 1764, 2469
NmeAIII	GCCGAG	2 cut(s)	175, 1064
NmuCI	GTSAC	5 cut(s)	38, 598, 1004, 1875, 2078
NruI	TCGCGA	1 cut(s)	489
PagI	TCATGA	1 cut(s)	49
PciSI	GCTCTTC	1 cut(s)	2143
PctI	GAATGC	2 cut(s)	1050, 2113
PdmI	GAANNNNTTC	3 cut(s)	16, 363, 495
PfeI	GAWTC	5 cut(s)	854, 1213, 1931, 2216, 2384
PflMI	CCANNNNNTGG	2 cut(s)	2003, 2278
PkrI	GCNGC	3 cut(s)	787, 940, 2204
PleI	GAGTC	5 cut(s)	45, 160, 1152, 2527, 2555
PpsI	GAGTC	5 cut(s)	45, 160, 1152, 2527, 2555
PpuMI	RGGWCCY	2 cut(s)	987, 2542
PshBI	ATTAAT	2 cut(s)	729, 1776
Psp5II	RGGWCCY	2 cut(s)	987, 2542
Psp6I	CCWGG	3 cut(s)	372, 480, 2271
PspFI	CCCAGC	1 cut(s)	2210
PspGI	CCWGG	3 cut(s)	372, 480, 2271
PspN4I	GGNNCC	5 cut(s)	720, 1386, 1633, 1764, 2469
PspPI	GGNCC	4 cut(s)	305, 987, 1255, 2542
PspPPI	RGGWCCY	2 cut(s)	987, 2542
PsrI	GAACNNNNNNTAC	2 cut(s)	2337, 2369
PstI	CTGCAG	2 cut(s)	1483, 2329
PsuI	RGATCY	3 cut(s)	767, 2284, 2467
RruI	TCGCGA	1 cut(s)	489
RsaI	GTAC	5 cut(s)	28, 77, 1029, 1970, 2260
RsaNI	GTAC	5 cut(s)	27, 76, 1028, 1969, 2259
RseI	CAYNNNNRTG	2 cut(s)	1167, 2336
SapI	GCTCTTC	1 cut(s)	2143
SatI	GCNGC	3 cut(s)	786, 939, 2203
Sau3AI	GATC	9 cut(s)	280, 767, 915, 1275, 1324, 1471, 1858, 2284, 2467
Sau96I	GGNCC	4 cut(s)	305, 987, 1255, 2542
SchI	GAGTC	5 cut(s)	46, 161, 1153, 2528, 2555
ScrFI	CCNGG	3 cut(s)	374, 482, 2273
SduI	GDGCHC	4 cut(s)	253, 1636, 2300, 2479
SfaNI	GCATC	7 cut(s)	658, 718, 792, 1505, 1661, 1689, 2157
SfcI	CTRYAG	2 cut(s)	1479, 2325
SinI	GGWCC	3 cut(s)	987, 1255, 2542
SmiMI	CAYNNNNRTG	2 cut(s)	1167, 2336
SmlI	CTYRAG	4 cut(s)	997, 2251, 2420, 2504
SmoI	CTYRAG	4 cut(s)	997, 2251, 2420, 2504
SsiI	CCGC	4 cut(s)	650, 1528, 2111, 2465
SspMI	CTAG	8 cut(s)	63, 246, 254, 465, 1407, 1901, 2181, 2199
StyD4I	CCNGG	3 cut(s)	372, 480, 2271
StyI	CCWWGG	2 cut(s)	537, 1413
TaiI	ACGT	1 cut(s)	2106
TaqI	TCGA	7 cut(s)	193, 825, 918, 1683, 2289, 2406, 2522
TaqII	GACCGA	1 cut(s)	2424
TatI	WGTACW	3 cut(s)	26, 75, 1027
TfiI	GAWTC	5 cut(s)	854, 1213, 1931, 2216, 2384
TscAI	CASTG	9 cut(s)	47, 151, 208, 510, 661, 1215, 1444, 1483, 1749
TseFI	GTSAC	5 cut(s)	38, 598, 1004, 1875, 2078
TseI	GCWGC	3 cut(s)	785, 938, 2202
Tsp45I	GTSAC	5 cut(s)	38, 598, 1004, 1875, 2078
TspGWI	ACGGA	1 cut(s)	21
TspRI	CASTG	9 cut(s)	47, 151, 208, 510, 661, 1215, 1444, 1483, 1749
Van91I	CCANNNNNTGG	2 cut(s)	2003, 2278
VneI	GTGCAC	1 cut(s)	2296
VpaK11BI	GGWCC	3 cut(s)	987, 1255, 2542
VspI	ATTAAT	2 cut(s)	729, 1776
XapI	RAATTY	4 cut(s)	320, 415, 494, 1952
XmiI	GTMKAC	2 cut(s)	569, 2012
XmnI	GAANNNNTTC	3 cut(s)	16, 363, 495
XspI	CTAG	8 cut(s)	63, 246, 254, 465, 1407, 1901, 2181, 2199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.