Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008629.1

Orthogroup ID

OG0008303

Physical Location & Seq

Genomic Coordinates Forward (+)

53076 .. 61230

Gene Structure 8155 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008629.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2946 bp

atggagggaaatttaatccgcggggcccacctccatgaagtgcttagagtgtgcgtgccagaacgtcccactcccacgctccccactccgcagcccacgcgcgtggagcgcaaccggcgtccctccacggtccgattcccacgacggagtaaagaaatgaagaaaccgtactcacgggccccactccacgagtcagcaagcgtctccgatgtcacctccatgaagtgcttagagtgtgcgtgccagaacgtcccactcccacgctccccactccgcagcccacgcgcgtggagcgcaaccggcgtctctccactatccgattcccacgacggaggttttgaagccggaataagttttggtttgggacaagtttggggctgtgttggtatgaatggggtgaagttgatgcagctggagttgtctggggataaatcaagctcttcaaaaatgcatttcgcaaagctcgatgattctcctatgttccgcaagcagatacagggcatggaggacagtgccgagtcattgagggagagaagtctaaagttttacaaaggatgtcgaaaatacactgaaggtcttggggaagcttatgatggggacattgcttttgctagtgccctagaaacatttggtggggggcataatgatccaattagtgtcgcttttggaggccctgttatgaccaaatttactatcgcattaagagaaattgggacatacaaggaagttcttcgttcccaggttgagcatatgctaaatgacagattgttacaatttgtgaattttgatttgcatgaggtcaaggaagcacgaaaacgttttgacaaggctagccttctttatgaccaggctcgcgaaaaatttctctcactgagaaaaggaacaaggaatgatgtagccaccatggtagaggaggagcttcataatgcaaggtctacatttgagcaagctcgttttagtcttgtgactgctctttctactgttgaagcaaaaaagaggtttgagtttctggaagcggtcagtgggacaatggatgcccatcttcgttacttcaaacagggttacgagttgttgcatcaaatggaaccctatattaatcaggtcttgacttatgctcaacagtcaagagaaagatccaactatgaacaggcagctcttaatgaaaggatgcaagattacaaaagacaggtcgatagagagagtaggtggtcgtccaatggttctaatgggtctcctaatggagatgggatacaagctattggtagaagttcacataaaatgatagaggctgttatgcaatctgctgcaaagggaaaggttcaaaccattaggcaaggttatctctcaaagaggtcctcaaacttgaggggtgactggaaaagaagattttttgttcttgatagccgaggaatgctctattactatcggaaacaaatcagcaaatcatcatctggctctggtagtcaactttctggtcagaggaatagttctgagcttggttctggactgttgagtcgctggctttcttctcattatcatggtggagtgcatgatgagaaatctgttgctcatcacacagtgaatctgcttacatcgacaatcaaagttgacgctgaccagtcggacctaagattttgtttcaggatcatttcaccaacaaagaactatactttgcaggcagagagtgcacttgatcaaatggattggattgaaaagataacgggggttattgcttcattacttagctctcaggctcctgagaggtttctgcctgctagtcccatgggaagccatcgtcgttctgccagtgagagtagttcgtttgagagttctgattttgatcacactgcagttgaagaacttgcttcggacaggagcggcctgaataatgctgaccaccgccaattaagaagttcgcaacagcaacggtcttctttaagaagtgagaagacaattgacactctacgacgagtatgtgggaatgataaatgtgctgattgtggtgcccctgagccagattgggcatcattaaatcttggcgttcttgtttgcatcgaatgttctggtgttcatcgtaatcttggtgttcatatctcaaaggtaaggtctctgacactggatgtcaaagtatgggagccttctgtcattaatttgtttcagtcattgggtaatgcctttgcaaactctgtctgggaggaacttttgcaatcaagaagtgcttttcagcttgatcttatagccacagggtcacataaatctgataaaacacagctagtttttatcagcaaacccaatcagactgattcaatatcggtaaaggagaagttcattcatgcaaagtacgcagacaagctttttgtaaggaggccaaaggatggacagtatactcatttagtggcacaacagatttgggagggtgttcgtgctaatgacaagaaagctgtgtatcgtcacattgttaattctgaaccagacgtgaatgcggtgtatgagcaagcctcgtgtggctcttccttaacccttgcaaaagtaatgctgatgcaagagcagactagccatgaccaaagctctagctgcttagctggggattcattggagaggtcttctggtagctcttcaaacttgagtggtacaagtgaagtccaggctatggaggatctcgacgggtgcacccttcttcaccttgcttgtgaaactgcagacattggtatgcttgaactgctcctacaatatggagcaaatgtaaatgcgactgattcaagaggtcaaacaccactcgaccgatgtattctcaagggcagaaacacatttgcaaaattgcttcttacaaggggagcggatccaagaacactaaatggggaaggtaaaacccccattgagctggcagttgagtcgaactttgatgatggcgaggtcctttctatattatcagactcccgtggataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0005096 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005798 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0007275 GO:0007389 GO:0008047 GO:0008150 GO:0008289 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009888 GO:0009965 GO:0010016 GO:0010033 GO:0010051 GO:0010087 GO:0012505 GO:0016020 GO:0016192 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030234 GO:0030695 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0035091 GO:0042221 GO:0043085 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050790 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0097708 GO:0098657 GO:0098772 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 Ank_5 ArfGap BAR_3 PH Pkinase

Protein Analysis

981

Amino Acids

109.14

Weight (kDa)

8.39

Isoelectric Point (pI)

55.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008303)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13300
fragaria_vesca	FvH4_4g22770 FvH4_4g22770
malus_domestica	MD13G1129800.v1.1 MD16G1130100.v1.1
prunus_persica	Prupe.1G216500_v2.0.a1
pyrus_communis	pycom13g11290 pycom16g11080
rosa_chinensis	RchiOBHm_Chr4g0428991
rosa_laevigata	RLG00000007106
rosa_multiflora	Rmu_sc0008629.1_g000014
rosa_roxburghii	Rroxscaffold_5G00370650
rosa_rugosa	Rorug04G0231400 Rorug04G0231500 Rorug04G0231600 Rorug04G0231700 Rorug04G0231800
rosa_samantha	Rh4AG287900 Rh4BG293900 Rh4CG309500 Rh4DG290900
rosa_wichuraiana	Rw0G014080 Rw4G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1512
AccB1I	GGYRCC	1 cut(s)	2003
AccB7I	CCANNNNNTGG	2 cut(s)	2375, 2650
AccBSI	CCGCTC	2 cut(s)	1878, 2837
AccI	GTMKAC	2 cut(s)	935, 2384
AccII	CGCG	6 cut(s)	21, 100, 102, 285, 287, 855
AclI	AACGTT	1 cut(s)	817
AclWI	GGATC	6 cut(s)	641, 1128, 1652, 2664, 2834, 2847
AcsI	RAATTY	4 cut(s)	10, 686, 781, 860
AcuI	CTGAAG	1 cut(s)	591
AcyI	GRCGYC	2 cut(s)	118, 303
AdeI	CACNNNGTG	1 cut(s)	1579
AfaI	GTAC	3 cut(s)	170, 2342, 2632
AfiI	CCNNNNNNNGG	2 cut(s)	2375, 2650
AjiI	CACGTC	1 cut(s)	2476
AjnI	CCWGG	3 cut(s)	738, 846, 2643
AleI	CACNNNNGTG	2 cut(s)	101, 286
Alw21I	GWGCWC	2 cut(s)	1690, 2672
Alw26I	GTCTC	4 cut(s)	208, 310, 1236, 2112
Alw44I	GTGCAC	2 cut(s)	1686, 2668
AlwI	GGATC	6 cut(s)	641, 1128, 1652, 2664, 2834, 2847
AoxI	GGCC	5 cut(s)	24, 177, 670, 1879, 2366
ApaI	GGGCCC	2 cut(s)	28, 181
ApaLI	GTGCAC	2 cut(s)	1686, 2668
ApeKI	GCWGC	6 cut(s)	91, 276, 409, 1151, 1304, 2574
ApoI	RAATTY	4 cut(s)	10, 686, 781, 860
AseI	ATTAAT	2 cut(s)	1095, 2148
Asp700I	GAANNNNTTC	2 cut(s)	729, 861
AspLEI	GCGC	4 cut(s)	102, 111, 287, 296
AspS9I	GGNCC	9 cut(s)	24, 25, 130, 177, 178, 671, 1353, 1624, 2914
AsuHPI	GGTGA	5 cut(s)	205, 409, 1382, 1644, 2672
AsuNHI	GCTAGC	1 cut(s)	830
AvaII	GGWCC	4 cut(s)	130, 1353, 1624, 2914
BaeGI	GKGCMC	6 cut(s)	28, 181, 619, 1690, 2008, 2672
BamHI	GGATCC	1 cut(s)	2839
BanI	GGYRCC	1 cut(s)	2003
BanII	GRGCYC	2 cut(s)	28, 181
BarI	GAAGNNNNNNTAC	2 cut(s)	152, 184
BauI	CACGAG	2 cut(s)	188, 2500
BbsI	GAAGAC	3 cut(s)	1923, 1955, 2595
Bbv12I	GWGCWC	2 cut(s)	1690, 2672
BbvI	GCAGC	6 cut(s)	103, 288, 421, 1163, 1291, 2561
BccI	CCATC	6 cut(s)	587, 1047, 1238, 1800, 2369, 2900
BcgI	CGANNNNNNTGC	2 cut(s)	2874, 2908
BciT130I	CCWGG	3 cut(s)	740, 848, 2645
BciVI	GTATCC	1 cut(s)	1242
BclI	TGATCA	2 cut(s)	1693, 1840
BcoDI	GTCTC	4 cut(s)	208, 310, 1236, 2112
BfaI	CTAG	7 cut(s)	612, 620, 831, 1776, 2273, 2553, 2571
BfmI	CTRYAG	2 cut(s)	1848, 2697
BfuI	GTATCC	1 cut(s)	1242
BisI	GCNGC	7 cut(s)	92, 277, 410, 1152, 1305, 1879, 2575
BlpI	GCTNAGC	1 cut(s)	2578
BlsI	GCNGC	7 cut(s)	93, 278, 411, 1153, 1306, 1880, 2576
Bme1390I	CCNGG	3 cut(s)	740, 848, 2645
Bme18I	GGWCC	4 cut(s)	130, 1353, 1624, 2914
BmgBI	CACGTC	1 cut(s)	2476
BmgT120I	GGNCC	9 cut(s)	24, 25, 130, 177, 178, 671, 1353, 1624, 2914
BmiI	GGNNCC	9 cut(s)	25, 26, 179, 180, 1086, 1755, 2005, 2136, 2841
BmrFI	CCNGG	3 cut(s)	740, 848, 2645
BmsI	GCATC	7 cut(s)	396, 1024, 1084, 1158, 2033, 2061, 2529
BmtI	GCTAGC	1 cut(s)	834
BpiI	GAAGAC	3 cut(s)	1923, 1955, 2595
BplI	GAGNNNNNCTC	4 cut(s)	1398, 1430, 2483, 2515
BpmI	CTGGAG	1 cut(s)	434
Bpu10I	CCTNAGC	1 cut(s)	2010
Bpu1102I	GCTNAGC	1 cut(s)	2578
BpuEI	CTTGAG	3 cut(s)	1384, 2644, 2777
BsaBI	GATNNNNATC	2 cut(s)	1038, 1839
BsaHI	GRCGYC	2 cut(s)	118, 303
BsaI	GGTCTC	2 cut(s)	1236, 2112
BsaJI	CCNNGG	7 cut(s)	19, 126, 738, 903, 1405, 1782, 2938
BsaXI	ACNNNNNCTCC	4 cut(s)	660, 690, 2727, 2757
Bsc4I	CCNNNNNNNGG	2 cut(s)	2375, 2650
Bse118I	RCCGGY	2 cut(s)	114, 299
Bse1I	ACTGG	4 cut(s)	1379, 1618, 1806, 2121
Bse3DI	GCAATG	1 cut(s)	600
Bse8I	GATNNNNATC	2 cut(s)	1038, 1839
BseBI	CCWGG	3 cut(s)	740, 848, 2645
BseDI	CCNNGG	7 cut(s)	19, 126, 738, 903, 1405, 1782, 2938
BseGI	GGATG	5 cut(s)	560, 1039, 1173, 2125, 2380
BseJI	GATNNNNATC	2 cut(s)	1038, 1839
BseLI	CCNNNNNNNGG	2 cut(s)	2375, 2650
BseMI	GCAATG	1 cut(s)	600
BseMII	CTCAG	5 cut(s)	863, 1482, 1749, 1763, 2001
BseNI	ACTGG	4 cut(s)	1379, 1618, 1806, 2121
BseRI	GAGGAG	2 cut(s)	926, 929
BseSI	GKGCMC	6 cut(s)	28, 181, 619, 1690, 2008, 2672
BseXI	GCAGC	6 cut(s)	103, 288, 421, 1163, 1291, 2561
BseYI	CCCAGC	1 cut(s)	2582
Bsh1236I	CGCG	6 cut(s)	21, 100, 102, 285, 287, 855
Bsh1285I	CGRYCG	1 cut(s)	2782
BshFI	GGCC	5 cut(s)	26, 179, 672, 1881, 2368
BshNI	GGYRCC	1 cut(s)	2003
BsiEI	CGRYCG	1 cut(s)	2782
BsiHKAI	GWGCWC	2 cut(s)	1690, 2672
BsiSI	CCGG	3 cut(s)	115, 300, 345
BslFI	GGGAC	8 cut(s)	51, 105, 236, 378, 611, 727, 1039, 1764
BslI	CCNNNNNNNGG	2 cut(s)	2375, 2650
BsmAI	GTCTC	4 cut(s)	208, 310, 1236, 2112
BsmBI	CGTCTC	2 cut(s)	208, 310
BsmFI	GGGAC	8 cut(s)	51, 105, 236, 378, 611, 727, 1039, 1764
BsmI	GAATGC	2 cut(s)	1416, 2485
BsnI	GGCC	5 cut(s)	26, 179, 672, 1881, 2368
Bso31I	GGTCTC	2 cut(s)	1236, 2112
Bsp120I	GGGCCC	2 cut(s)	24, 177
Bsp1286I	GDGCHC	6 cut(s)	28, 181, 619, 1690, 2008, 2672
Bsp143I	GATC	8 cut(s)	646, 1133, 1644, 1693, 1840, 2230, 2656, 2839
Bsp1720I	GCTNAGC	1 cut(s)	2578
Bsp19I	CCATGG	2 cut(s)	903, 1782
Bsp68I	TCGCGA	1 cut(s)	855
BspANI	GGCC	5 cut(s)	26, 179, 672, 1881, 2368
BspCNI	CTCAG	5 cut(s)	864, 1483, 1750, 1762, 2002
BspFNI	CGCG	6 cut(s)	21, 100, 102, 285, 287, 855
BspLI	GGNNCC	9 cut(s)	25, 26, 179, 180, 1086, 1755, 2005, 2136, 2841
BspMAI	CTGCAG	2 cut(s)	1852, 2701
BspOI	GCTAGC	1 cut(s)	834
BspPI	GGATC	6 cut(s)	641, 1128, 1652, 2664, 2834, 2847
BspQI	GCTCTTC	3 cut(s)	445, 2515, 2620
BspT107I	GGYRCC	1 cut(s)	2003
BspTNI	GGTCTC	2 cut(s)	1236, 2112
BsrBI	CCGCTC	2 cut(s)	1878, 2837
BsrDI	GCAATG	1 cut(s)	600
BsrFI	RCCGGY	2 cut(s)	114, 299
BsrI	ACTGG	4 cut(s)	1379, 1618, 1806, 2121
BssAI	RCCGGY	2 cut(s)	114, 299
BssECI	CCNNGG	7 cut(s)	19, 126, 738, 903, 1405, 1782, 2938
BssMI	GATC	8 cut(s)	646, 1133, 1644, 1693, 1840, 2230, 2656, 2839
BssNAI	GTATAC	1 cut(s)	2385
BssNI	GRCGYC	2 cut(s)	118, 303
BssSI	CACGAG	2 cut(s)	188, 2500
BssT1I	CCWWGG	2 cut(s)	903, 1782
Bst1107I	GTATAC	1 cut(s)	2385
Bst2BI	CACGAG	2 cut(s)	188, 2500
Bst2UI	CCWGG	3 cut(s)	740, 848, 2645
Bst4CI	ACNGT	9 cut(s)	130, 168, 512, 982, 1122, 1509, 1579, 1929, 2382
Bst6I	CTCTTC	3 cut(s)	445, 2515, 2620
BstACI	GRCGYC	2 cut(s)	118, 303
BstAPI	GCANNNNNTGC	1 cut(s)	1685
BstDSI	CCRYGG	5 cut(s)	19, 126, 903, 1782, 2938
BstF5I	GGATG	5 cut(s)	560, 1039, 1173, 2125, 2380
BstFNI	CGCG	6 cut(s)	21, 100, 102, 285, 287, 855
BstHHI	GCGC	4 cut(s)	102, 111, 287, 296
BstKTI	GATC	8 cut(s)	649, 1136, 1647, 1696, 1843, 2233, 2659, 2842
BstMAI	GTCTC	4 cut(s)	208, 310, 1236, 2112
BstMBI	GATC	8 cut(s)	646, 1133, 1644, 1693, 1840, 2230, 2656, 2839
BstMCI	CGRYCG	1 cut(s)	2782
BstNI	CCWGG	3 cut(s)	740, 848, 2645
BstSCI	CCNGG	3 cut(s)	738, 846, 2643
BstSFI	CTRYAG	2 cut(s)	1848, 2697
BstSLI	GKGCMC	6 cut(s)	28, 181, 619, 1690, 2008, 2672
BstUI	CGCG	6 cut(s)	21, 100, 102, 285, 287, 855
BstV1I	GCAGC	6 cut(s)	103, 288, 421, 1163, 1291, 2561
BstV2I	GAAGAC	3 cut(s)	1923, 1955, 2595
BstX2I	RGATCY	3 cut(s)	1133, 2656, 2839
BstXI	CCANNNNNNTGG	3 cut(s)	103, 288, 2881
BstYI	RGATCY	3 cut(s)	1133, 2656, 2839
BstZ17I	GTATAC	1 cut(s)	2385
BsuI	GTATCC	1 cut(s)	1242
BsuRI	GGCC	5 cut(s)	26, 179, 672, 1881, 2368
BtgI	CCRYGG	5 cut(s)	19, 126, 903, 1782, 2938
BtrI	CACGTC	1 cut(s)	2476
BtsCI	GGATG	5 cut(s)	560, 1039, 1173, 2125, 2380
BtsI	GCAGTG	1 cut(s)	1845
BtsIMutI	CAGTG	8 cut(s)	517, 567, 869, 1027, 1584, 1813, 1845, 2114
BtuMI	TCGCGA	1 cut(s)	855
CfoI	GCGC	4 cut(s)	102, 111, 287, 296
Cfr10I	RCCGGY	2 cut(s)	114, 299
Cfr13I	GGNCC	9 cut(s)	24, 25, 130, 177, 178, 671, 1353, 1624, 2914
Cfr42I	CCGCGG	1 cut(s)	22
CpoI	CGGWCCG	1 cut(s)	130
CseI	GACGC	4 cut(s)	107, 190, 292, 1619
Csp6I	GTAC	3 cut(s)	169, 2341, 2631
CspI	CGGWCCG	1 cut(s)	130
CviQI	GTAC	3 cut(s)	169, 2341, 2631
DpnI	GATC	8 cut(s)	648, 1135, 1646, 1695, 1842, 2232, 2658, 2841
DpnII	GATC	8 cut(s)	646, 1133, 1644, 1693, 1840, 2230, 2656, 2839
DraIII	CACNNNGTG	1 cut(s)	1579
DrdI	GACNNNNNNGTC	1 cut(s)	1512
DseDI	GACNNNNNNGTC	1 cut(s)	1512
Eam1104I	CTCTTC	3 cut(s)	445, 2515, 2620
EarI	CTCTTC	3 cut(s)	445, 2515, 2620
Eco130I	CCWWGG	2 cut(s)	903, 1782
Eco24I	GRGCYC	2 cut(s)	28, 181
Eco31I	GGTCTC	2 cut(s)	1236, 2112
Eco47I	GGWCC	4 cut(s)	130, 1353, 1624, 2914
Eco57I	CTGAAG	1 cut(s)	591
EcoO109I	RGGNCCY	5 cut(s)	24, 178, 671, 1353, 2914
EcoRII	CCWGG	3 cut(s)	738, 846, 2643
EcoT14I	CCWWGG	2 cut(s)	903, 1782
EcoT22I	ATGCAT	1 cut(s)	453
EcoT38I	GRGCYC	2 cut(s)	28, 181
ErhI	CCWWGG	2 cut(s)	903, 1782
Esp3I	CGTCTC	2 cut(s)	208, 310
FalI	AAGNNNNNCTT	2 cut(s)	2203, 2235
FaqI	GGGAC	8 cut(s)	51, 105, 236, 378, 611, 727, 1039, 1764
FauI	CCCGC	1 cut(s)	14
FauNDI	CATATG	1 cut(s)	750
FbaI	TGATCA	2 cut(s)	1693, 1840
FblI	GTMKAC	2 cut(s)	935, 2384
Fnu4HI	GCNGC	7 cut(s)	92, 277, 410, 1152, 1305, 1879, 2575
FokI	GGATG	5 cut(s)	567, 1046, 1180, 2132, 2387
FriOI	GRGCYC	2 cut(s)	28, 181
Fsp4HI	GCNGC	7 cut(s)	92, 277, 410, 1152, 1305, 1879, 2575
FspBI	CTAG	7 cut(s)	612, 620, 831, 1776, 2273, 2553, 2571
GlaI	GCGC	4 cut(s)	101, 110, 286, 295
GluI	GCNGC	7 cut(s)	92, 277, 410, 1152, 1305, 1879, 2575
GsaI	CCCAGC	1 cut(s)	2586
GsuI	CTGGAG	1 cut(s)	434
HaeIII	GGCC	5 cut(s)	26, 179, 672, 1881, 2368
HapII	CCGG	3 cut(s)	115, 300, 345
HgaI	GACGC	4 cut(s)	107, 190, 292, 1619
HhaI	GCGC	4 cut(s)	102, 111, 287, 296
Hin1I	GRCGYC	2 cut(s)	118, 303
Hin6I	GCGC	4 cut(s)	100, 109, 285, 294
HinP1I	GCGC	4 cut(s)	100, 109, 285, 294
HincII	GTYRAC	2 cut(s)	1466, 1609
HindII	GTYRAC	2 cut(s)	1466, 1609
HindIII	AAGCTT	2 cut(s)	585, 2351
HpaII	CCGG	3 cut(s)	115, 300, 345
HphI	GGTGA	5 cut(s)	205, 409, 1382, 1644, 2672
Hpy166II	GTNNAC	7 cut(s)	936, 1271, 1466, 1609, 1688, 2385, 2670
Hpy8I	GTNNAC	7 cut(s)	936, 1271, 1466, 1609, 1688, 2385, 2670
Hpy99I	CGWCG	5 cut(s)	147, 332, 1800, 1971, 2666
HpyAV	CCTTC	5 cut(s)	566, 845, 2148, 2684, 2855
HpyCH4III	ACNGT	9 cut(s)	130, 168, 512, 982, 1122, 1509, 1579, 1929, 2382
HpyCH4IV	ACGT	4 cut(s)	64, 249, 817, 2475
HpySE526I	ACGT	4 cut(s)	64, 249, 817, 2475
Hsp92I	GRCGYC	2 cut(s)	118, 303
HspAI	GCGC	4 cut(s)	100, 109, 285, 294
Ksp22I	TGATCA	2 cut(s)	1693, 1840
KspI	CCGCGG	1 cut(s)	22
Kzo9I	GATC	8 cut(s)	646, 1133, 1644, 1693, 1840, 2230, 2656, 2839
LguI	GCTCTTC	3 cut(s)	445, 2515, 2620
Lsp1109I	GCAGC	6 cut(s)	103, 288, 421, 1163, 1291, 2561
LweI	GCATC	7 cut(s)	396, 1024, 1084, 1158, 2033, 2061, 2529
MaeI	CTAG	7 cut(s)	612, 620, 831, 1776, 2273, 2553, 2571
MaeII	ACGT	4 cut(s)	64, 249, 817, 2475
MaeIII	GTNAC	8 cut(s)	211, 768, 964, 1046, 1061, 1370, 2247, 2450
MalI	GATC	8 cut(s)	648, 1135, 1646, 1695, 1842, 2232, 2658, 2841
MbiI	CCGCTC	2 cut(s)	1878, 2837
MboI	GATC	8 cut(s)	646, 1133, 1644, 1693, 1840, 2230, 2656, 2839
MfeI	CAATTG	1 cut(s)	1953
MflI	RGATCY	3 cut(s)	1133, 2656, 2839
MhlI	GDGCHC	6 cut(s)	28, 181, 619, 1690, 2008, 2672
MlyI	GAGTC	5 cut(s)	200, 527, 1522, 2900, 2927
MmeI	TCCRAC	2 cut(s)	1161, 1602
Mph1103I	ATGCAT	1 cut(s)	453
MroXI	GAANNNNTTC	2 cut(s)	729, 861
MslI	CAYNNNNRTG	6 cut(s)	33, 101, 218, 286, 1536, 2708
MspA1I	CMGCKG	2 cut(s)	21, 412
MspI	CCGG	3 cut(s)	115, 300, 345
MspR9I	CCNGG	3 cut(s)	740, 848, 2645
MunI	CAATTG	1 cut(s)	1953
Mva1269I	GAATGC	2 cut(s)	1416, 2485
MvaI	CCWGG	3 cut(s)	740, 848, 2645
MvnI	CGCG	6 cut(s)	21, 100, 102, 285, 287, 855
NcoI	CCATGG	2 cut(s)	903, 1782
NdeI	CATATG	1 cut(s)	750
NdeII	GATC	8 cut(s)	646, 1133, 1644, 1693, 1840, 2230, 2656, 2839
NheI	GCTAGC	1 cut(s)	830
NlaIV	GGNNCC	9 cut(s)	25, 26, 179, 180, 1086, 1755, 2005, 2136, 2841
NmeAIII	GCCGAG	2 cut(s)	541, 1430
NmuCI	GTSAC	5 cut(s)	211, 964, 1370, 2247, 2450
NruI	TCGCGA	1 cut(s)	855
NsiI	ATGCAT	1 cut(s)	453
OliI	CACNNNNGTG	2 cut(s)	101, 286
PciSI	GCTCTTC	3 cut(s)	445, 2515, 2620
PcsI	WCGNNNNNNNCGW	1 cut(s)	462
PctI	GAATGC	2 cut(s)	1416, 2485
PdmI	GAANNNNTTC	2 cut(s)	729, 861
PfeI	GAWTC	7 cut(s)	135, 320, 470, 1582, 2303, 2588, 2756
PflMI	CCANNNNNTGG	2 cut(s)	2375, 2650
PkrI	GCNGC	7 cut(s)	93, 278, 411, 1153, 1306, 1880, 2576
PleI	GAGTC	5 cut(s)	199, 526, 1521, 2899, 2927
PpsI	GAGTC	5 cut(s)	199, 526, 1521, 2899, 2927
PpuMI	RGGWCCY	2 cut(s)	1353, 2914
PshBI	ATTAAT	2 cut(s)	1095, 2148
Psp1406I	AACGTT	1 cut(s)	817
Psp5II	RGGWCCY	2 cut(s)	1353, 2914
Psp6I	CCWGG	3 cut(s)	738, 846, 2643
PspFI	CCCAGC	1 cut(s)	2582
PspGI	CCWGG	3 cut(s)	738, 846, 2643
PspN4I	GGNNCC	9 cut(s)	25, 26, 179, 180, 1086, 1755, 2005, 2136, 2841
PspOMI	GGGCCC	2 cut(s)	24, 177
PspPI	GGNCC	9 cut(s)	24, 25, 130, 177, 178, 671, 1353, 1624, 2914
PspPPI	RGGWCCY	2 cut(s)	1353, 2914
PsrI	GAACNNNNNNTAC	2 cut(s)	2709, 2741
PstI	CTGCAG	2 cut(s)	1852, 2701
PsuI	RGATCY	3 cut(s)	1133, 2656, 2839
PvuII	CAGCTG	1 cut(s)	412
RruI	TCGCGA	1 cut(s)	855
RsaI	GTAC	3 cut(s)	170, 2342, 2632
RsaNI	GTAC	3 cut(s)	169, 2341, 2631
RseI	CAYNNNNRTG	6 cut(s)	33, 101, 218, 286, 1536, 2708
Rsr2I	CGGWCCG	1 cut(s)	130
RsrII	CGGWCCG	1 cut(s)	130
SacII	CCGCGG	1 cut(s)	22
SapI	GCTCTTC	3 cut(s)	445, 2515, 2620
SatI	GCNGC	7 cut(s)	92, 277, 410, 1152, 1305, 1879, 2575
Sau3AI	GATC	8 cut(s)	646, 1133, 1644, 1693, 1840, 2230, 2656, 2839
Sau96I	GGNCC	9 cut(s)	24, 25, 130, 177, 178, 671, 1353, 1624, 2914
SchI	GAGTC	5 cut(s)	200, 527, 1522, 2900, 2927
ScrFI	CCNGG	3 cut(s)	740, 848, 2645
SduI	GDGCHC	6 cut(s)	28, 181, 619, 1690, 2008, 2672
SfaNI	GCATC	7 cut(s)	396, 1024, 1084, 1158, 2033, 2061, 2529
SfcI	CTRYAG	2 cut(s)	1848, 2697
Sfr303I	CCGCGG	1 cut(s)	22
SgrBI	CCGCGG	1 cut(s)	22
SinI	GGWCC	4 cut(s)	130, 1353, 1624, 2914
SmiMI	CAYNNNNRTG	6 cut(s)	33, 101, 218, 286, 1536, 2708
SmlI	CTYRAG	3 cut(s)	1363, 2623, 2792
SmoI	CTYRAG	3 cut(s)	1363, 2623, 2792
SspMI	CTAG	7 cut(s)	612, 620, 831, 1776, 2273, 2553, 2571
StyD4I	CCNGG	3 cut(s)	738, 846, 2643
StyI	CCWWGG	2 cut(s)	903, 1782
TaaI	ACNGT	9 cut(s)	130, 168, 512, 982, 1122, 1509, 1579, 1929, 2382
TaiI	ACGT	4 cut(s)	67, 252, 820, 2478
TaqI	TCGA	8 cut(s)	465, 559, 1191, 1595, 2055, 2661, 2778, 2894
TaqII	GACCGA	1 cut(s)	2796
TauI	GCSGC	1 cut(s)	1881
TfiI	GAWTC	7 cut(s)	135, 320, 470, 1582, 2303, 2588, 2756
TscAI	CASTG	8 cut(s)	517, 574, 876, 1027, 1584, 1813, 1852, 2121
TseFI	GTSAC	5 cut(s)	211, 964, 1370, 2247, 2450
TseI	GCWGC	6 cut(s)	91, 276, 409, 1151, 1304, 2574
Tsp45I	GTSAC	5 cut(s)	211, 964, 1370, 2247, 2450
TspGWI	ACGGA	2 cut(s)	160, 345
TspRI	CASTG	8 cut(s)	517, 574, 876, 1027, 1584, 1813, 1852, 2121
Van91I	CCANNNNNTGG	2 cut(s)	2375, 2650
VneI	GTGCAC	2 cut(s)	1686, 2668
VpaK11BI	GGWCC	4 cut(s)	130, 1353, 1624, 2914
VspI	ATTAAT	2 cut(s)	1095, 2148
XapI	RAATTY	4 cut(s)	10, 686, 781, 860
XmiI	GTMKAC	2 cut(s)	935, 2384
XmnI	GAANNNNTTC	2 cut(s)	729, 861
XspI	CTAG	7 cut(s)	612, 620, 831, 1776, 2273, 2553, 2571
Zsp2I	ATGCAT	1 cut(s)	453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.