Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0008303

Physical Location & Seq

Genomic Coordinates Reverse (-)

13599093 .. 13606148

Gene Structure 7056 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007106

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2613 bp

ATGCATTTCGCAAAGCTCGATGATTCTCCTATGTTCCGCAAGCAGATACAGGGCATGGAGGACAGTGCCGAGTCATTGAGGGAGAGAAGTTTAAAGTTTTACAAAGGATGTCGAAAATACACTGAAGGTCTTGGGGAAGCTTATGATGGGGACATTGCTTTTGCTAGTGCCCTAGAAACATTTGGTGGGGGGCATAATGATCCAATTAGTGTCGCTTTTGGAGGCCCTGTTATGACCAAATTTACTATCGCATTAAGAGAAATTGGGACATACAAGGAAGTTCTTCGTTCCCAGGTTGAGCATATGCTAAATGACAGATTGTTACAATTTGTGAATTTTGATTTACATGAGGTCAAGGAAGCGCGAAAACGTTTTGACAAGGCTAGCCTTCTTTATGACCAGGCTCGCGAAAAATTTCTCTCACTGAGAAAAGGTACAAGGAATGATGTAGCCACCATGGTAGAGGAGGAGCTTCATAATGCAAGGTCTACATTTGAGCAAGCTCGTTTTAGTCTTGTGACTGCTCTTTCTACTGTTGAAGCAAAAAAGAGGTTTGAGTTTCTGGAAGCGGTCAGTGGGACAATGGATGCCCATCTTCGTTACTTCAAACAGGGTTATGAGTTGTTGCATCAAATGGAACCCTATATTAATCAGGTCTTGACTTATGCTCAACAGTCAAGAGAAAGATCCAACTATGAACAGGCAGCTCTTAATGAAAGGATGCAAGATTACAAAAGACAGGTCGATAGAGAGAGTAGGTGGTCGTCCAATGGTTCTAATGGGTCTCCTAATGGAGATGGGATACAAGCTATTGGCAGAAGTTCACATAAAATGATAGAGGCTGTTATGCAATCTGCTGCAAAGGGAAAGGTTCAAACCATTAGGCAAGGTTATCTCTCAAAGAGGTCCTCAAACTTGAGGGGTGACTGGAAAAGAAGATTTTTTGTTCTTGATAGCCGAGGAATGCTCTATTACTATCGGAAACAAATCAGCAAATCATCTGGCTCTGGTAGTCAACTTTCTGGTCAGAGGAATAGTTCTGAGCTTGGTTCTGGACTGTTGAGTCGCTGGCTTTCTTCTCATTATCATGGTGGAGTGCATGATGAGAAATCTGTTGCTCATCACACAGTGAATCTGCTTACATCAACAATCAAAGTTGATGCTGACCAGTCGGACCTAAGATTTTGTTTCAGGATCATTTCACCAACAAAGAACTATACTTTGCAGGCAGAGAGTGCACTTGATCAAATGGATTGGATTGAAAAGATAACGGGGGTTATTGCTTCATTACTTAGCTCTCAGGCTCCTGAGAGGTTTCTGCCTGCTAGTCCCATGGGAAGCCATCGTCGTTCTGCCAGTGAGAGTAGTTCGTTTGAGAGTTCTGATTTTGATCACACTGCAGTTGAAGAACTTGCATCGGACAGGAGCCTGAATAACGCTGACCACCGCCAATTAAGAAGTTCGCAACAGCAACGGTCTTCTTTAAGAAGTGAGAAGACAATTGACACTCTACGACGAGTATGTGGGAATGATAAATGTGCTGATTGTGGTGCCCCTGAGCCAGATTGGGCATCATTAAATCTTGGCGTTCTTGTTTGCATCGAATGTTCTGGTGTTCATCGTAATCTTGGTGTTCATATCTCAAAGGTAAGGTCTCTAACACTGGATGTCAAAGTATGGGAGCCTTCTGTCATTAATTTGTTTCAGTCATTGGGTAATGCCTTTGCAAACTCTGTCTGGGAGGAACTTTTGCAATCAAGAAGTGCTTTTCAGCTTGATCTTATAGCCACAGGGTCACACAAATCTGATAAAACACAGCTAGTTTTTATCAGCAAACCCAATCAGTCTGATTCAATATCGGTAAAGGAGAAATTCATTCATGCAAAGTATGCAGACAAGCTTTTTGTAAGGAGGCCAAAGGATGGACAGTATACTCATTTAGTGGCACAACAGATTTGGGAGGGTGTTCGTGCTAATGACAAGAAAGCTGTGTATCGTCACATTGTGAATTCTGAACCAGACGTGAATGCGGTGTATGAGCAAGCCTCGTGTGGCTCTTCCTTAACCCTTGCAAAAGTAATGCTGATGCAAGAGCAGACTAGCCATGACCAAAGCTCTAGCTGCTTAGCTGGGGATTCATTGGAGAGGTCTTCTGGTAGCTCTTCAAACTTGAGTGGTACAAGTGAAGTCCAGGCTATGGAGGATCTCGACGGGTGCACCCTTCTTCACCTTGCTTGTGAAACTGCAGACATTGGTATGCTTGAACTGCTCCTACAATATGGAGCAAATGTAAATGCGACTGATTCAAGAGGTCAAACACCACTCGACCGATGTATTCTCAAGGGCAGAAACACATTTGCAAAATTGCTCCTTACAAGGGGAGCGGATCCACGAGCACTAAATGGGGAAGGTAAAACCCCTCTTGAGCTGGCAGTTGAGTCGAACTTTGATGATGGGGAGTTCATAAACTTGAGAGCTGGTTCTCCTTTGTATGAAGTCAGTGTTTTATGGGTTTCGAGAGTGGTAGGATGGCATGCCTGCCCTATGGGCCATGAGGGCATAGTTGAAAATGGTTATCAAGGGTTGGAACTTAAGATGGCTCAGGTGGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0005096 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005798 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0007275 GO:0007389 GO:0008047 GO:0008150 GO:0008289 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009888 GO:0009965 GO:0010016 GO:0010033 GO:0010051 GO:0010087 GO:0012505 GO:0016020 GO:0016192 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030234 GO:0030695 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0035091 GO:0042221 GO:0043085 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050790 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0097708 GO:0098657 GO:0098772 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 Ank_5 ArfGap BAR_3 PH Pkinase

Protein Analysis

871

Amino Acids

97.19

Weight (kDa)

6.83

Isoelectric Point (pI)

53.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAR_3	PF16746	6 - 235	1.5e-39	BAR domain of APPL family
BAR	PF03114	27 - 216	2.8e-12	BAR domain
PH	PF00169	294 - 427	9.6e-12	PH domain
ArfGap	PF01412	499 - 637	4.5e-32	Putative GTPase activating protein for Arf
Ank_2	PF12796	734 - 798	3.5e-10	Ankyrin repeats (3 copies)
Ank_5	PF13857	735 - 777	1.1e-07	Ankyrin repeats (many copies)
Ank	PF00023	737 - 768	4.7e-07	Ankyrin repeat
Ank_4	PF13637	742 - 791	5.3e-07	Ankyrin repeats (many copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0008303)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13300
fragaria_vesca	FvH4_4g22770 FvH4_4g22770
malus_domestica	MD13G1129800.v1.1 MD16G1130100.v1.1
prunus_persica	Prupe.1G216500_v2.0.a1
pyrus_communis	pycom13g11290 pycom16g11080
rosa_chinensis	RchiOBHm_Chr4g0428991
rosa_laevigata	RLG00000007106
rosa_multiflora	Rmu_sc0008629.1_g000014
rosa_roxburghii	Rroxscaffold_5G00370650
rosa_rugosa	Rorug04G0231400 Rorug04G0231500 Rorug04G0231600 Rorug04G0231700 Rorug04G0231800
rosa_samantha	Rh4AG287900 Rh4BG293900 Rh4CG309500 Rh4DG290900
rosa_wichuraiana	Rw0G014080 Rw4G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1062
AccB1I	GGYRCC	1 cut(s)	1550
AccB7I	CCANNNNNTGG	2 cut(s)	1922, 2197
AccBSI	CCGCTC	1 cut(s)	2384
AccI	GTMKAC	2 cut(s)	488, 1931
AccII	CGCG	2 cut(s)	364, 408
AciI	CCGC	5 cut(s)	37, 569, 1447, 2030, 2384
AclI	AACGTT	1 cut(s)	370
AclWI	GGATC	6 cut(s)	194, 681, 1202, 2211, 2381, 2394
AcsI	RAATTY	5 cut(s)	239, 334, 413, 1871, 2008
AcuI	CTGAAG	1 cut(s)	144
AdeI	CACNNNGTG	2 cut(s)	1129, 2005
AfaI	GTAC	2 cut(s)	436, 2179
AfiI	CCNNNNNNNGG	3 cut(s)	1922, 2197, 2377
AflII	CTTAAG	1 cut(s)	2591
AjiI	CACGTC	1 cut(s)	2023
AjnI	CCWGG	3 cut(s)	291, 399, 2190
Alw21I	GWGCWC	3 cut(s)	1240, 2219, 2398
Alw26I	GTCTC	2 cut(s)	789, 1659
Alw44I	GTGCAC	2 cut(s)	1236, 2215
AlwI	GGATC	6 cut(s)	194, 681, 1202, 2211, 2381, 2394
AoxI	GGCC	3 cut(s)	223, 1913, 2548
ApaLI	GTGCAC	2 cut(s)	1236, 2215
ApeKI	GCWGC	3 cut(s)	704, 857, 2121
ApoI	RAATTY	5 cut(s)	239, 334, 413, 1871, 2008
ArsI	GACNNNNNNTTYG	8 cut(s)	143, 175, 726, 758, 1637, 1669, 1886, 1918
AseI	ATTAAT	2 cut(s)	648, 1695
Asp700I	GAANNNNTTC	2 cut(s)	282, 414
AspLEI	GCGC	1 cut(s)	364
AspS9I	GGNCC	4 cut(s)	224, 906, 1174, 2548
AsuHPI	GGTGA	3 cut(s)	935, 1194, 2219
AsuNHI	GCTAGC	1 cut(s)	383
AvaII	GGWCC	2 cut(s)	906, 1174
BaeGI	GKGCMC	4 cut(s)	172, 1240, 1555, 2219
BamHI	GGATCC	1 cut(s)	2386
BanI	GGYRCC	1 cut(s)	1550
BauI	CACGAG	2 cut(s)	2047, 2391
BbsI	GAAGAC	3 cut(s)	1470, 1502, 2142
Bbv12I	GWGCWC	3 cut(s)	1240, 2219, 2398
BbvI	GCAGC	3 cut(s)	716, 844, 2108
BccI	CCATC	8 cut(s)	140, 600, 791, 1350, 1916, 2447, 2523, 2590
BcgI	CGANNNNNNTGC	2 cut(s)	2421, 2455
BciT130I	CCWGG	3 cut(s)	293, 401, 2192
BciVI	GTATCC	1 cut(s)	795
BclI	TGATCA	2 cut(s)	1243, 1390
BcoDI	GTCTC	2 cut(s)	789, 1659
BfaI	CTAG	7 cut(s)	165, 173, 384, 1326, 1820, 2100, 2118
BfmI	CTRYAG	2 cut(s)	1398, 2244
BfrI	CTTAAG	1 cut(s)	2591
BfuI	GTATCC	1 cut(s)	795
BglI	GCCNNNNNGGC	2 cut(s)	2547, 2556
BisI	GCNGC	3 cut(s)	705, 858, 2122
BlpI	GCTNAGC	1 cut(s)	2125
BlsI	GCNGC	3 cut(s)	706, 859, 2123
Bme1390I	CCNGG	3 cut(s)	293, 401, 2192
Bme18I	GGWCC	2 cut(s)	906, 1174
BmgBI	CACGTC	1 cut(s)	2023
BmgT120I	GGNCC	4 cut(s)	224, 906, 1174, 2548
BmiI	GGNNCC	6 cut(s)	639, 1305, 1427, 1552, 1683, 2388
BmrFI	CCNGG	3 cut(s)	293, 401, 2192
BmsI	GCATC	8 cut(s)	577, 637, 711, 1150, 1424, 1580, 1608, 2076
BmtI	GCTAGC	1 cut(s)	387
BpiI	GAAGAC	3 cut(s)	1470, 1502, 2142
BplI	GAGNNNNNCTC	4 cut(s)	951, 983, 2030, 2062
Bpu10I	CCTNAGC	2 cut(s)	1557, 2601
Bpu1102I	GCTNAGC	1 cut(s)	2125
BpuEI	CTTGAG	5 cut(s)	937, 2191, 2324, 2444, 2491
BsaBI	GATNNNNATC	2 cut(s)	591, 1389
BsaI	GGTCTC	2 cut(s)	789, 1659
BsaJI	CCNNGG	4 cut(s)	291, 456, 958, 1332
BsaXI	ACNNNNNCTCC	4 cut(s)	213, 243, 2274, 2304
Bsc4I	CCNNNNNNNGG	3 cut(s)	1922, 2197, 2377
Bse1I	ACTGG	4 cut(s)	932, 1168, 1356, 1668
Bse3DI	GCAATG	1 cut(s)	153
Bse8I	GATNNNNATC	2 cut(s)	591, 1389
BseBI	CCWGG	3 cut(s)	293, 401, 2192
BseDI	CCNNGG	4 cut(s)	291, 456, 958, 1332
BseGI	GGATG	6 cut(s)	113, 592, 726, 1672, 1927, 2534
BseJI	GATNNNNATC	2 cut(s)	591, 1389
BseLI	CCNNNNNNNGG	3 cut(s)	1922, 2197, 2377
BseMI	GCAATG	1 cut(s)	153
BseMII	CTCAG	5 cut(s)	416, 1032, 1299, 1313, 1548
BseNI	ACTGG	4 cut(s)	932, 1168, 1356, 1668
BseRI	GAGGAG	2 cut(s)	479, 482
BseSI	GKGCMC	4 cut(s)	172, 1240, 1555, 2219
BseXI	GCAGC	3 cut(s)	716, 844, 2108
BseYI	CCCAGC	1 cut(s)	2129
Bsh1236I	CGCG	2 cut(s)	364, 408
Bsh1285I	CGRYCG	1 cut(s)	2329
BshFI	GGCC	3 cut(s)	225, 1915, 2550
BshNI	GGYRCC	1 cut(s)	1550
BsiEI	CGRYCG	1 cut(s)	2329
BsiHKAI	GWGCWC	3 cut(s)	1240, 2219, 2398
BslFI	GGGAC	4 cut(s)	164, 280, 592, 1314
BslI	CCNNNNNNNGG	3 cut(s)	1922, 2197, 2377
BsmAI	GTCTC	2 cut(s)	789, 1659
BsmFI	GGGAC	4 cut(s)	164, 280, 592, 1314
BsmI	GAATGC	2 cut(s)	969, 2032
BsnI	GGCC	3 cut(s)	225, 1915, 2550
Bso31I	GGTCTC	2 cut(s)	789, 1659
Bsp1286I	GDGCHC	5 cut(s)	172, 1240, 1555, 2219, 2398
Bsp143I	GATC	8 cut(s)	199, 686, 1194, 1243, 1390, 1777, 2203, 2386
Bsp1720I	GCTNAGC	1 cut(s)	2125
Bsp19I	CCATGG	2 cut(s)	456, 1332
Bsp68I	TCGCGA	1 cut(s)	408
BspACI	CCGC	5 cut(s)	37, 569, 1447, 2030, 2384
BspANI	GGCC	3 cut(s)	225, 1915, 2550
BspCNI	CTCAG	5 cut(s)	417, 1033, 1300, 1312, 1549
BspFNI	CGCG	2 cut(s)	364, 408
BspLI	GGNNCC	6 cut(s)	639, 1305, 1427, 1552, 1683, 2388
BspMAI	CTGCAG	2 cut(s)	1402, 2248
BspOI	GCTAGC	1 cut(s)	387
BspPI	GGATC	6 cut(s)	194, 681, 1202, 2211, 2381, 2394
BspQI	GCTCTTC	2 cut(s)	2062, 2167
BspT107I	GGYRCC	1 cut(s)	1550
BspTI	CTTAAG	1 cut(s)	2591
BspTNI	GGTCTC	2 cut(s)	789, 1659
BsrBI	CCGCTC	1 cut(s)	2384
BsrDI	GCAATG	1 cut(s)	153
BsrI	ACTGG	4 cut(s)	932, 1168, 1356, 1668
BssECI	CCNNGG	4 cut(s)	291, 456, 958, 1332
BssMI	GATC	8 cut(s)	199, 686, 1194, 1243, 1390, 1777, 2203, 2386
BssNAI	GTATAC	1 cut(s)	1932
BssSI	CACGAG	2 cut(s)	2047, 2391
BssT1I	CCWWGG	2 cut(s)	456, 1332
Bst1107I	GTATAC	1 cut(s)	1932
Bst2BI	CACGAG	2 cut(s)	2047, 2391
Bst2UI	CCWGG	3 cut(s)	293, 401, 2192
Bst4CI	ACNGT	7 cut(s)	65, 535, 675, 1059, 1129, 1476, 1929
Bst6I	CTCTTC	2 cut(s)	2062, 2167
BstAFI	CTTAAG	1 cut(s)	2591
BstAPI	GCANNNNNTGC	2 cut(s)	1235, 1889
BstDEI	CTNAG	9 cut(s)	425, 1041, 1178, 1292, 1299, 1308, 1557, 2125, 2601
BstDSI	CCRYGG	2 cut(s)	456, 1332
BstF5I	GGATG	6 cut(s)	113, 592, 726, 1672, 1927, 2534
BstFNI	CGCG	2 cut(s)	364, 408
BstHHI	GCGC	1 cut(s)	364
BstKTI	GATC	8 cut(s)	202, 689, 1197, 1246, 1393, 1780, 2206, 2389
BstMAI	GTCTC	2 cut(s)	789, 1659
BstMBI	GATC	8 cut(s)	199, 686, 1194, 1243, 1390, 1777, 2203, 2386
BstMCI	CGRYCG	1 cut(s)	2329
BstMWI	GCNNNNNNNGC	6 cut(s)	1235, 1889, 2121, 2266, 2547, 2556
BstNI	CCWGG	3 cut(s)	293, 401, 2192
BstNSI	RCATGY	1 cut(s)	2537
BstSCI	CCNGG	3 cut(s)	291, 399, 2190
BstSFI	CTRYAG	2 cut(s)	1398, 2244
BstSLI	GKGCMC	4 cut(s)	172, 1240, 1555, 2219
BstUI	CGCG	2 cut(s)	364, 408
BstV1I	GCAGC	3 cut(s)	716, 844, 2108
BstV2I	GAAGAC	3 cut(s)	1470, 1502, 2142
BstX2I	RGATCY	3 cut(s)	686, 2203, 2386
BstYI	RGATCY	3 cut(s)	686, 2203, 2386
BstZ17I	GTATAC	1 cut(s)	1932
BsuI	GTATCC	1 cut(s)	795
BsuRI	GGCC	3 cut(s)	225, 1915, 2550
BtgI	CCRYGG	2 cut(s)	456, 1332
BtrI	CACGTC	1 cut(s)	2023
BtsCI	GGATG	6 cut(s)	113, 592, 726, 1672, 1927, 2534
BtsI	GCAGTG	1 cut(s)	1395
BtsIMutI	CAGTG	9 cut(s)	70, 120, 422, 580, 1134, 1363, 1395, 1661, 2506
BtuMI	TCGCGA	1 cut(s)	408
CfoI	GCGC	1 cut(s)	364
Cfr13I	GGNCC	4 cut(s)	224, 906, 1174, 2548
Csp6I	GTAC	2 cut(s)	435, 2178
CviQI	GTAC	2 cut(s)	435, 2178
DdeI	CTNAG	9 cut(s)	425, 1041, 1178, 1292, 1299, 1308, 1557, 2125, 2601
DpnI	GATC	8 cut(s)	201, 688, 1196, 1245, 1392, 1779, 2205, 2388
DpnII	GATC	8 cut(s)	199, 686, 1194, 1243, 1390, 1777, 2203, 2386
DraI	TTTAAA	1 cut(s)	93
DraIII	CACNNNGTG	2 cut(s)	1129, 2005
DrdI	GACNNNNNNGTC	1 cut(s)	1062
DseDI	GACNNNNNNGTC	1 cut(s)	1062
Eam1104I	CTCTTC	2 cut(s)	2062, 2167
EarI	CTCTTC	2 cut(s)	2062, 2167
Eco130I	CCWWGG	2 cut(s)	456, 1332
Eco31I	GGTCTC	2 cut(s)	789, 1659
Eco47I	GGWCC	2 cut(s)	906, 1174
Eco57I	CTGAAG	1 cut(s)	144
EcoO109I	RGGNCCY	2 cut(s)	224, 906
EcoRI	GAATTC	1 cut(s)	2008
EcoRII	CCWGG	3 cut(s)	291, 399, 2190
EcoT14I	CCWWGG	2 cut(s)	456, 1332
EcoT22I	ATGCAT	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	456, 1332
FalI	AAGNNNNNCTT	2 cut(s)	1750, 1782
FaqI	GGGAC	4 cut(s)	164, 280, 592, 1314
FauNDI	CATATG	1 cut(s)	303
FbaI	TGATCA	2 cut(s)	1243, 1390
FblI	GTMKAC	2 cut(s)	488, 1931
Fnu4HI	GCNGC	3 cut(s)	705, 858, 2122
FokI	GGATG	6 cut(s)	120, 599, 733, 1679, 1934, 2541
Fsp4HI	GCNGC	3 cut(s)	705, 858, 2122
FspBI	CTAG	7 cut(s)	165, 173, 384, 1326, 1820, 2100, 2118
GlaI	GCGC	1 cut(s)	363
GluI	GCNGC	3 cut(s)	705, 858, 2122
GsaI	CCCAGC	1 cut(s)	2133
HaeIII	GGCC	3 cut(s)	225, 1915, 2550
HhaI	GCGC	1 cut(s)	364
Hin6I	GCGC	1 cut(s)	362
HinP1I	GCGC	1 cut(s)	362
HincII	GTYRAC	1 cut(s)	1016
HindII	GTYRAC	1 cut(s)	1016
HindIII	AAGCTT	2 cut(s)	138, 1898
HinfI	GANTC	8 cut(s)	23, 71, 1063, 1132, 1850, 2135, 2303, 2438
HphI	GGTGA	3 cut(s)	935, 1194, 2219
Hpy166II	GTNNAC	6 cut(s)	489, 824, 1016, 1238, 1932, 2217
Hpy8I	GTNNAC	6 cut(s)	489, 824, 1016, 1238, 1932, 2217
Hpy99I	CGWCG	3 cut(s)	1350, 1518, 2213
HpyAV	CCTTC	5 cut(s)	119, 398, 1695, 2231, 2402
HpyCH4III	ACNGT	7 cut(s)	65, 535, 675, 1059, 1129, 1476, 1929
HpyCH4IV	ACGT	2 cut(s)	370, 2022
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1235, 1889, 2121, 2266, 2547, 2556
HpyF3I	CTNAG	9 cut(s)	425, 1041, 1178, 1292, 1299, 1308, 1557, 2125, 2601
HpySE526I	ACGT	2 cut(s)	370, 2022
HspAI	GCGC	1 cut(s)	362
Ksp22I	TGATCA	2 cut(s)	1243, 1390
Kzo9I	GATC	8 cut(s)	199, 686, 1194, 1243, 1390, 1777, 2203, 2386
LguI	GCTCTTC	2 cut(s)	2062, 2167
LmnI	GCTCC	8 cut(s)	469, 1309, 1425, 1681, 2274, 2282, 2373, 2381
Lsp1109I	GCAGC	3 cut(s)	716, 844, 2108
LweI	GCATC	8 cut(s)	577, 637, 711, 1150, 1424, 1580, 1608, 2076
MaeI	CTAG	7 cut(s)	165, 173, 384, 1326, 1820, 2100, 2118
MaeII	ACGT	2 cut(s)	370, 2022
MaeIII	GTNAC	6 cut(s)	321, 517, 599, 923, 1794, 1997
MalI	GATC	8 cut(s)	201, 688, 1196, 1245, 1392, 1779, 2205, 2388
MbiI	CCGCTC	1 cut(s)	2384
MboI	GATC	8 cut(s)	199, 686, 1194, 1243, 1390, 1777, 2203, 2386
MfeI	CAATTG	1 cut(s)	1500
MflI	RGATCY	3 cut(s)	686, 2203, 2386
MhlI	GDGCHC	5 cut(s)	172, 1240, 1555, 2219, 2398
MlyI	GAGTC	3 cut(s)	80, 1072, 2447
MmeI	TCCRAC	3 cut(s)	714, 1152, 2565
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	2 cut(s)	282, 414
MslI	CAYNNNNRTG	2 cut(s)	1086, 2255
MspCI	CTTAAG	1 cut(s)	2591
MspR9I	CCNGG	3 cut(s)	293, 401, 2192
MunI	CAATTG	1 cut(s)	1500
Mva1269I	GAATGC	2 cut(s)	969, 2032
MvaI	CCWGG	3 cut(s)	293, 401, 2192
MvnI	CGCG	2 cut(s)	364, 408
MwoI	GCNNNNNNNGC	6 cut(s)	1235, 1889, 2121, 2266, 2547, 2556
NcoI	CCATGG	2 cut(s)	456, 1332
NdeI	CATATG	1 cut(s)	303
NdeII	GATC	8 cut(s)	199, 686, 1194, 1243, 1390, 1777, 2203, 2386
NheI	GCTAGC	1 cut(s)	383
NlaIV	GGNNCC	6 cut(s)	639, 1305, 1427, 1552, 1683, 2388
NmeAIII	GCCGAG	2 cut(s)	94, 983
NmuCI	GTSAC	4 cut(s)	517, 923, 1794, 1997
NruI	TCGCGA	1 cut(s)	408
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	2537
PaeI	GCATGC	1 cut(s)	2537
PciSI	GCTCTTC	2 cut(s)	2062, 2167
PcsI	WCGNNNNNNNCGW	1 cut(s)	15
PctI	GAATGC	2 cut(s)	969, 2032
PdmI	GAANNNNTTC	2 cut(s)	282, 414
PfeI	GAWTC	5 cut(s)	23, 1132, 1850, 2135, 2303
PflMI	CCANNNNNTGG	2 cut(s)	1922, 2197
PkrI	GCNGC	3 cut(s)	706, 859, 2123
PleI	GAGTC	3 cut(s)	79, 1071, 2446
PpsI	GAGTC	3 cut(s)	79, 1071, 2446
PpuMI	RGGWCCY	1 cut(s)	906
PshBI	ATTAAT	2 cut(s)	648, 1695
Psp1406I	AACGTT	1 cut(s)	370
Psp5II	RGGWCCY	1 cut(s)	906
Psp6I	CCWGG	3 cut(s)	291, 399, 2190
PspFI	CCCAGC	1 cut(s)	2129
PspGI	CCWGG	3 cut(s)	291, 399, 2190
PspN4I	GGNNCC	6 cut(s)	639, 1305, 1427, 1552, 1683, 2388
PspPI	GGNCC	4 cut(s)	224, 906, 1174, 2548
PspPPI	RGGWCCY	1 cut(s)	906
PsrI	GAACNNNNNNTAC	2 cut(s)	2256, 2288
PstI	CTGCAG	2 cut(s)	1402, 2248
PsuI	RGATCY	3 cut(s)	686, 2203, 2386
RruI	TCGCGA	1 cut(s)	408
RsaI	GTAC	2 cut(s)	436, 2179
RsaNI	GTAC	2 cut(s)	435, 2178
RseI	CAYNNNNRTG	2 cut(s)	1086, 2255
SapI	GCTCTTC	2 cut(s)	2062, 2167
SatI	GCNGC	3 cut(s)	705, 858, 2122
Sau3AI	GATC	8 cut(s)	199, 686, 1194, 1243, 1390, 1777, 2203, 2386
Sau96I	GGNCC	4 cut(s)	224, 906, 1174, 2548
SchI	GAGTC	3 cut(s)	80, 1072, 2447
ScrFI	CCNGG	3 cut(s)	293, 401, 2192
SduI	GDGCHC	5 cut(s)	172, 1240, 1555, 2219, 2398
SfaNI	GCATC	8 cut(s)	577, 637, 711, 1150, 1424, 1580, 1608, 2076
SfcI	CTRYAG	2 cut(s)	1398, 2244
SinI	GGWCC	2 cut(s)	906, 1174
SmiMI	CAYNNNNRTG	2 cut(s)	1086, 2255
SmlI	CTYRAG	6 cut(s)	916, 2170, 2339, 2423, 2470, 2591
SmoI	CTYRAG	6 cut(s)	916, 2170, 2339, 2423, 2470, 2591
SphI	GCATGC	1 cut(s)	2537
SsiI	CCGC	5 cut(s)	37, 569, 1447, 2030, 2384
SspMI	CTAG	7 cut(s)	165, 173, 384, 1326, 1820, 2100, 2118
StyD4I	CCNGG	3 cut(s)	291, 399, 2190
StyI	CCWWGG	2 cut(s)	456, 1332
TaaI	ACNGT	7 cut(s)	65, 535, 675, 1059, 1129, 1476, 1929
TaiI	ACGT	2 cut(s)	373, 2025
TaqI	TCGA	8 cut(s)	18, 112, 744, 1602, 2208, 2325, 2441, 2516
TaqII	GACCGA	1 cut(s)	2343
TfiI	GAWTC	5 cut(s)	23, 1132, 1850, 2135, 2303
TscAI	CASTG	9 cut(s)	70, 127, 429, 580, 1134, 1363, 1402, 1668, 2506
TseFI	GTSAC	4 cut(s)	517, 923, 1794, 1997
TseI	GCWGC	3 cut(s)	704, 857, 2121
Tsp45I	GTSAC	4 cut(s)	517, 923, 1794, 1997
TspRI	CASTG	9 cut(s)	70, 127, 429, 580, 1134, 1363, 1402, 1668, 2506
Van91I	CCANNNNNTGG	2 cut(s)	1922, 2197
Vha464I	CTTAAG	1 cut(s)	2591
VneI	GTGCAC	2 cut(s)	1236, 2215
VpaK11BI	GGWCC	2 cut(s)	906, 1174
VspI	ATTAAT	2 cut(s)	648, 1695
XapI	RAATTY	5 cut(s)	239, 334, 413, 1871, 2008
XceI	RCATGY	1 cut(s)	2537
XmiI	GTMKAC	2 cut(s)	488, 1931
XmnI	GAANNNNTTC	2 cut(s)	282, 414
XspI	CTAG	7 cut(s)	165, 173, 384, 1326, 1820, 2100, 2118
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.