BAR domain of APPL family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13300 |
| fragaria_vesca | FvH4_4g22770 FvH4_4g22770 |
| malus_domestica | MD13G1129800.v1.1 MD16G1130100.v1.1 |
| prunus_persica | Prupe.1G216500_v2.0.a1 |
| pyrus_communis | pycom13g11290 pycom16g11080 |
| rosa_chinensis | RchiOBHm_Chr4g0428991 |
| rosa_laevigata | RLG00000007106 |
| rosa_multiflora | Rmu_sc0008629.1_g000014 |
| rosa_roxburghii | Rroxscaffold_5G00370650 |
| rosa_rugosa | Rorug04G0231400 Rorug04G0231500 Rorug04G0231600 Rorug04G0231700 Rorug04G0231800 |
| rosa_samantha | Rh4AG287900 Rh4BG293900 Rh4CG309500 Rh4DG290900 |
| rosa_wichuraiana | Rw0G014080 Rw4G024950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 690 |
| AarI | CACCTGC | 1 cut(s) | 1129 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 251 |
| Acc16I | TGCGCA | 1 cut(s) | 1224 |
| Acc36I | ACCTGC | 1 cut(s) | 1129 |
| AccB1I | GGYRCC | 1 cut(s) | 1066 |
| AccIII | TCCGGA | 1 cut(s) | 845 |
| AciI | CCGC | 5 cut(s) | 19, 216, 247, 282, 1061 |
| AclWI | GGATC | 3 cut(s) | 292, 406, 1121 |
| AcsI | RAATTY | 1 cut(s) | 623 |
| AcuI | CTGAAG | 2 cut(s) | 102, 1232 |
| AdeI | CACNNNGTG | 1 cut(s) | 542 |
| AfaI | GTAC | 3 cut(s) | 220, 1048, 1106 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 347, 456 |
| AflIII | ACRYGT | 1 cut(s) | 365 |
| AgsI | TTSAA | 4 cut(s) | 616, 853, 1027, 1324 |
| AjiI | CACGTC | 1 cut(s) | 1153 |
| AjnI | CCWGG | 3 cut(s) | 346, 538, 1146 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 305, 337, 482, 514 |
| AluBI | AGCT | 3 cut(s) | 44, 612, 1284 |
| AluI | AGCT | 3 cut(s) | 44, 612, 1284 |
| Alw21I | GWGCWC | 1 cut(s) | 396 |
| Alw26I | GTCTC | 5 cut(s) | 190, 259, 339, 726, 926 |
| AlwI | GGATC | 3 cut(s) | 292, 406, 1121 |
| Ama87I | CYCGRG | 2 cut(s) | 1050, 1189 |
| Aor13HI | TCCGGA | 1 cut(s) | 845 |
| AoxI | GGCC | 3 cut(s) | 108, 559, 1057 |
| ApeKI | GCWGC | 3 cut(s) | 351, 507, 906 |
| ApoI | RAATTY | 1 cut(s) | 623 |
| AspLEI | GCGC | 4 cut(s) | 146, 292, 1225, 1316 |
| AspS9I | GGNCC | 5 cut(s) | 109, 244, 309, 683, 1058 |
| AsuC2I | CCSGG | 1 cut(s) | 702 |
| AsuHPI | GGTGA | 1 cut(s) | 1153 |
| AvaI | CYCGRG | 2 cut(s) | 1050, 1189 |
| AvaII | GGWCC | 3 cut(s) | 244, 309, 683 |
| BanI | GGYRCC | 1 cut(s) | 1066 |
| BanII | GRGCYC | 1 cut(s) | 585 |
| Bbv12I | GWGCWC | 1 cut(s) | 396 |
| BbvI | GCAGC | 3 cut(s) | 338, 519, 918 |
| BccI | CCATC | 3 cut(s) | 449, 875, 1126 |
| BceAI | ACGGC | 1 cut(s) | 614 |
| BciT130I | CCWGG | 3 cut(s) | 348, 540, 1148 |
| BciVI | GTATCC | 1 cut(s) | 136 |
| BcnI | CCSGG | 1 cut(s) | 702 |
| BcoDI | GTCTC | 5 cut(s) | 190, 259, 339, 726, 926 |
| BfaI | CTAG | 5 cut(s) | 41, 185, 342, 1200, 1269 |
| BfuAI | ACCTGC | 1 cut(s) | 1129 |
| BfuI | GTATCC | 1 cut(s) | 136 |
| BisI | GCNGC | 3 cut(s) | 352, 508, 907 |
| BlsI | GCNGC | 3 cut(s) | 353, 509, 908 |
| BmcAI | AGTACT | 1 cut(s) | 1048 |
| Bme1390I | CCNGG | 4 cut(s) | 348, 540, 702, 1148 |
| Bme18I | GGWCC | 3 cut(s) | 244, 309, 683 |
| BmeT110I | CYCGRG | 2 cut(s) | 1050, 1189 |
| BmgBI | CACGTC | 1 cut(s) | 1153 |
| BmgT120I | GGNCC | 5 cut(s) | 109, 244, 309, 683, 1058 |
| BmiI | GGNNCC | 2 cut(s) | 584, 1068 |
| BmrFI | CCNGG | 4 cut(s) | 348, 540, 702, 1148 |
| BmrI | ACTGGG | 1 cut(s) | 771 |
| BmsI | GCATC | 2 cut(s) | 174, 1234 |
| BmuI | ACTGGG | 1 cut(s) | 771 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 776, 808 |
| BpmI | CTGGAG | 2 cut(s) | 1002, 1129 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1162 |
| BpuEI | CTTGAG | 1 cut(s) | 631 |
| BpuMI | CCSGG | 1 cut(s) | 702 |
| BsaI | GGTCTC | 1 cut(s) | 926 |
| BsaJI | CCNNGG | 2 cut(s) | 105, 562 |
| BsaWI | WCCGGW | 2 cut(s) | 121, 845 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 347, 456 |
| Bse118I | RCCGGY | 1 cut(s) | 1063 |
| Bse1I | ACTGG | 2 cut(s) | 766, 1112 |
| Bse3DI | GCAATG | 1 cut(s) | 299 |
| BseAI | TCCGGA | 1 cut(s) | 845 |
| BseBI | CCWGG | 3 cut(s) | 348, 540, 1148 |
| BseDI | CCNNGG | 2 cut(s) | 105, 562 |
| BseGI | GGATG | 2 cut(s) | 11, 72 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 347, 456 |
| BseMI | GCAATG | 1 cut(s) | 299 |
| BseMII | CTCAG | 1 cut(s) | 807 |
| BseNI | ACTGG | 2 cut(s) | 766, 1112 |
| BseRI | GAGGAG | 3 cut(s) | 171, 634, 1276 |
| BseXI | GCAGC | 3 cut(s) | 338, 519, 918 |
| BseYI | CCCAGC | 1 cut(s) | 1273 |
| BsgI | GTGCAG | 1 cut(s) | 1157 |
| BshFI | GGCC | 3 cut(s) | 110, 561, 1059 |
| BshNI | GGYRCC | 1 cut(s) | 1066 |
| BsiHKAI | GWGCWC | 1 cut(s) | 396 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1050, 1189 |
| BsiSI | CCGG | 5 cut(s) | 122, 141, 702, 846, 1064 |
| BslFI | GGGAC | 2 cut(s) | 173, 692 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 347, 456 |
| BsmAI | GTCTC | 5 cut(s) | 190, 259, 339, 726, 926 |
| BsmFI | GGGAC | 2 cut(s) | 173, 692 |
| BsnI | GGCC | 3 cut(s) | 110, 561, 1059 |
| Bso31I | GGTCTC | 1 cut(s) | 926 |
| BsoBI | CYCGRG | 2 cut(s) | 1050, 1189 |
| Bsp1286I | GDGCHC | 2 cut(s) | 396, 585 |
| Bsp13I | TCCGGA | 1 cut(s) | 845 |
| BspACI | CCGC | 5 cut(s) | 19, 216, 247, 282, 1061 |
| BspANI | GGCC | 3 cut(s) | 110, 561, 1059 |
| BspCNI | CTCAG | 1 cut(s) | 806 |
| BspEI | TCCGGA | 1 cut(s) | 845 |
| BspLI | GGNNCC | 2 cut(s) | 584, 1068 |
| BspMI | ACCTGC | 1 cut(s) | 1129 |
| BspPI | GGATC | 3 cut(s) | 292, 406, 1121 |
| BspT107I | GGYRCC | 1 cut(s) | 1066 |
| BspTNI | GGTCTC | 1 cut(s) | 926 |
| BsrDI | GCAATG | 1 cut(s) | 299 |
| BsrFI | RCCGGY | 1 cut(s) | 1063 |
| BsrI | ACTGG | 2 cut(s) | 766, 1112 |
| BssAI | RCCGGY | 1 cut(s) | 1063 |
| BssECI | CCNNGG | 2 cut(s) | 105, 562 |
| BssT1I | CCWWGG | 2 cut(s) | 105, 562 |
| Bst2UI | CCWGG | 3 cut(s) | 348, 540, 1148 |
| Bst4CI | ACNGT | 5 cut(s) | 498, 662, 683, 925, 1181 |
| BstC8I | GCNNGC | 4 cut(s) | 559, 638, 785, 1061 |
| BstDEI | CTNAG | 4 cut(s) | 717, 793, 1162, 1341 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 345 |
| BstF5I | GGATG | 2 cut(s) | 11, 72 |
| BstHHI | GCGC | 4 cut(s) | 146, 292, 1225, 1316 |
| BstMAI | GTCTC | 5 cut(s) | 190, 259, 339, 726, 926 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 246 |
| BstNI | CCWGG | 3 cut(s) | 348, 540, 1148 |
| BstNSI | RCATGY | 1 cut(s) | 369 |
| BstSCI | CCNGG | 4 cut(s) | 346, 538, 700, 1146 |
| BstV1I | GCAGC | 3 cut(s) | 338, 519, 918 |
| BstX2I | RGATCY | 1 cut(s) | 1113 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1081 |
| BstYI | RGATCY | 1 cut(s) | 1113 |
| BsuI | GTATCC | 1 cut(s) | 136 |
| BsuRI | GGCC | 3 cut(s) | 110, 561, 1059 |
| BtrI | CACGTC | 1 cut(s) | 1153 |
| BtsCI | GGATG | 2 cut(s) | 11, 72 |
| BveI | ACCTGC | 1 cut(s) | 1129 |
| Cac8I | GCNNGC | 4 cut(s) | 559, 638, 785, 1061 |
| CfoI | GCGC | 4 cut(s) | 146, 292, 1225, 1316 |
| Cfr10I | RCCGGY | 1 cut(s) | 1063 |
| Cfr13I | GGNCC | 5 cut(s) | 109, 244, 309, 683, 1058 |
| CseI | GACGC | 1 cut(s) | 898 |
| CsiI | ACCWGGT | 1 cut(s) | 538 |
| Csp6I | GTAC | 3 cut(s) | 219, 1047, 1105 |
| CviAII | CATG | 4 cut(s) | 58, 366, 376, 928 |
| CviQI | GTAC | 3 cut(s) | 219, 1047, 1105 |
| DdeI | CTNAG | 4 cut(s) | 717, 793, 1162, 1341 |
| DraIII | CACNNNGTG | 1 cut(s) | 542 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 251 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 251 |
| EciI | GGCGGA | 1 cut(s) | 8 |
| Eco130I | CCWWGG | 2 cut(s) | 105, 562 |
| Eco24I | GRGCYC | 1 cut(s) | 585 |
| Eco31I | GGTCTC | 1 cut(s) | 926 |
| Eco47I | GGWCC | 3 cut(s) | 244, 309, 683 |
| Eco57I | CTGAAG | 2 cut(s) | 102, 1232 |
| Eco88I | CYCGRG | 2 cut(s) | 1050, 1189 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 345 |
| EcoO109I | RGGNCCY | 1 cut(s) | 109 |
| EcoRII | CCWGG | 3 cut(s) | 346, 538, 1146 |
| EcoT14I | CCWWGG | 2 cut(s) | 105, 562 |
| EcoT38I | GRGCYC | 1 cut(s) | 585 |
| ErhI | CCWWGG | 2 cut(s) | 105, 562 |
| FaeI | CATG | 4 cut(s) | 61, 369, 379, 931 |
| FaiI | YATR | 9 cut(s) | 59, 252, 367, 377, 658, 690, 774, 888, 929 |
| FaqI | GGGAC | 2 cut(s) | 173, 692 |
| FatI | CATG | 4 cut(s) | 57, 365, 375, 927 |
| FauI | CCCGC | 1 cut(s) | 1068 |
| Fnu4HI | GCNGC | 3 cut(s) | 352, 508, 907 |
| FokI | GGATG | 1 cut(s) | 59 |
| FriOI | GRGCYC | 1 cut(s) | 585 |
| Fsp4HI | GCNGC | 3 cut(s) | 352, 508, 907 |
| FspAI | RTGCGCAY | 1 cut(s) | 1224 |
| FspBI | CTAG | 5 cut(s) | 41, 185, 342, 1200, 1269 |
| FspI | TGCGCA | 1 cut(s) | 1224 |
| GlaI | GCGC | 4 cut(s) | 145, 291, 1224, 1315 |
| GluI | GCNGC | 3 cut(s) | 352, 508, 907 |
| GsaI | CCCAGC | 1 cut(s) | 1277 |
| GsuI | CTGGAG | 2 cut(s) | 1002, 1129 |
| HaeIII | GGCC | 3 cut(s) | 110, 561, 1059 |
| HapII | CCGG | 5 cut(s) | 122, 141, 702, 846, 1064 |
| HgaI | GACGC | 1 cut(s) | 898 |
| HhaI | GCGC | 4 cut(s) | 146, 292, 1225, 1316 |
| Hin1II | CATG | 4 cut(s) | 61, 369, 379, 931 |
| Hin6I | GCGC | 4 cut(s) | 144, 290, 1223, 1314 |
| HinP1I | GCGC | 4 cut(s) | 144, 290, 1223, 1314 |
| HincII | GTYRAC | 1 cut(s) | 748 |
| HindII | GTYRAC | 1 cut(s) | 748 |
| HinfI | GANTC | 2 cut(s) | 849, 1278 |
| HpaII | CCGG | 5 cut(s) | 122, 141, 702, 846, 1064 |
| HphI | GGTGA | 1 cut(s) | 1153 |
| Hpy166II | GTNNAC | 2 cut(s) | 748, 1105 |
| Hpy188I | TCNGA | 5 cut(s) | 82, 398, 796, 1016, 1301 |
| Hpy188III | TCNNGA | 7 cut(s) | 402, 428, 523, 648, 823, 846, 981 |
| Hpy8I | GTNNAC | 2 cut(s) | 748, 1105 |
| HpyAV | CCTTC | 5 cut(s) | 25, 128, 597, 773, 798 |
| HpyCH4III | ACNGT | 5 cut(s) | 498, 662, 683, 925, 1181 |
| HpyCH4IV | ACGT | 3 cut(s) | 810, 815, 1152 |
| HpyCH4V | TGCA | 4 cut(s) | 507, 536, 1090, 1138 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 246 |
| HpyF3I | CTNAG | 4 cut(s) | 717, 793, 1162, 1341 |
| HpySE526I | ACGT | 3 cut(s) | 810, 815, 1152 |
| Hsp92II | CATG | 4 cut(s) | 61, 369, 379, 931 |
| HspAI | GCGC | 4 cut(s) | 144, 290, 1223, 1314 |
| Kpn2I | TCCGGA | 1 cut(s) | 845 |
| LmnI | GCTCC | 2 cut(s) | 588, 1289 |
| Lsp1109I | GCAGC | 3 cut(s) | 338, 519, 918 |
| LweI | GCATC | 2 cut(s) | 174, 1234 |
| MabI | ACCWGGT | 1 cut(s) | 538 |
| MaeI | CTAG | 5 cut(s) | 41, 185, 342, 1200, 1269 |
| MaeII | ACGT | 3 cut(s) | 810, 815, 1152 |
| MaeIII | GTNAC | 5 cut(s) | 407, 754, 811, 994, 1193 |
| MboII | GAAGA | 6 cut(s) | 663, 664, 788, 1235, 1238, 1257 |
| MflI | RGATCY | 1 cut(s) | 1113 |
| MhlI | GDGCHC | 2 cut(s) | 396, 585 |
| MluCI | AATT | 5 cut(s) | 576, 593, 623, 769, 1230 |
| MmeI | TCCRAC | 1 cut(s) | 1324 |
| MroI | TCCGGA | 1 cut(s) | 845 |
| MseI | TTAA | 1 cut(s) | 383 |
| MslI | CAYNNNNRTG | 1 cut(s) | 926 |
| MspI | CCGG | 5 cut(s) | 122, 141, 702, 846, 1064 |
| MspR9I | CCNGG | 4 cut(s) | 348, 540, 702, 1148 |
| MvaI | CCWGG | 3 cut(s) | 348, 540, 1148 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 246 |
| NciI | CCSGG | 1 cut(s) | 702 |
| NlaIII | CATG | 4 cut(s) | 61, 369, 379, 931 |
| NlaIV | GGNNCC | 2 cut(s) | 584, 1068 |
| NmeAIII | GCCGAG | 1 cut(s) | 192 |
| NmuCI | GTSAC | 1 cut(s) | 994 |
| NsbI | TGCGCA | 1 cut(s) | 1224 |
| NspI | RCATGY | 1 cut(s) | 369 |
| PaqCI | CACCTGC | 1 cut(s) | 1129 |
| PciI | ACATGT | 1 cut(s) | 365 |
| PfeI | GAWTC | 2 cut(s) | 849, 1278 |
| PkrI | GCNGC | 3 cut(s) | 353, 509, 908 |
| PscI | ACATGT | 1 cut(s) | 365 |
| PsiI | TTATAA | 1 cut(s) | 690 |
| Psp6I | CCWGG | 3 cut(s) | 346, 538, 1146 |
| PspFI | CCCAGC | 1 cut(s) | 1273 |
| PspGI | CCWGG | 3 cut(s) | 346, 538, 1146 |
| PspN4I | GGNNCC | 2 cut(s) | 584, 1068 |
| PspPI | GGNCC | 5 cut(s) | 109, 244, 309, 683, 1058 |
| PsuI | RGATCY | 1 cut(s) | 1113 |
| RsaI | GTAC | 3 cut(s) | 220, 1048, 1106 |
| RsaNI | GTAC | 3 cut(s) | 219, 1047, 1105 |
| RseI | CAYNNNNRTG | 1 cut(s) | 926 |
| SaqAI | TTAA | 1 cut(s) | 383 |
| SatI | GCNGC | 3 cut(s) | 352, 508, 907 |
| Sau96I | GGNCC | 5 cut(s) | 109, 244, 309, 683, 1058 |
| ScaI | AGTACT | 1 cut(s) | 1048 |
| ScrFI | CCNGG | 4 cut(s) | 348, 540, 702, 1148 |
| SduI | GDGCHC | 2 cut(s) | 396, 585 |
| SexAI | ACCWGGT | 1 cut(s) | 538 |
| SfaNI | GCATC | 2 cut(s) | 174, 1234 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1063 |
| SinI | GGWCC | 3 cut(s) | 244, 309, 683 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 926 |
| SmlI | CTYRAG | 1 cut(s) | 646 |
| SmoI | CTYRAG | 1 cut(s) | 646 |
| Sse9I | AATT | 5 cut(s) | 576, 593, 623, 769, 1230 |
| SsiI | CCGC | 5 cut(s) | 19, 216, 247, 282, 1061 |
| SspI | AATATT | 2 cut(s) | 800, 1210 |
| SspMI | CTAG | 5 cut(s) | 41, 185, 342, 1200, 1269 |
| StyD4I | CCNGG | 4 cut(s) | 346, 538, 700, 1146 |
| StyI | CCWWGG | 2 cut(s) | 105, 562 |
| TaaI | ACNGT | 5 cut(s) | 498, 662, 683, 925, 1181 |
| TaiI | ACGT | 3 cut(s) | 813, 818, 1155 |
| TaqI | TCGA | 5 cut(s) | 207, 324, 414, 938, 1130 |
| TaqII | GACCGA | 1 cut(s) | 413 |
| TasI | AATT | 5 cut(s) | 576, 593, 623, 769, 1230 |
| TatI | WGTACW | 2 cut(s) | 1046, 1104 |
| TfiI | GAWTC | 2 cut(s) | 849, 1278 |
| Tru1I | TTAA | 1 cut(s) | 383 |
| Tru9I | TTAA | 1 cut(s) | 383 |
| TseFI | GTSAC | 1 cut(s) | 994 |
| TseI | GCWGC | 3 cut(s) | 351, 507, 906 |
| Tsp45I | GTSAC | 1 cut(s) | 994 |
| TspDTI | ATGAA | 3 cut(s) | 84, 789, 793 |
| TspGWI | ACGGA | 1 cut(s) | 846 |
| VpaK11BI | GGWCC | 3 cut(s) | 244, 309, 683 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 345 |
| XapI | RAATTY | 1 cut(s) | 623 |
| XceI | RCATGY | 1 cut(s) | 369 |
| XspI | CTAG | 5 cut(s) | 41, 185, 342, 1200, 1269 |
| ZrmI | AGTACT | 1 cut(s) | 1048 |