Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008303

Physical Location & Seq

Genomic Coordinates Forward (+)

53910015 .. 53917952

Gene Structure 7938 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39783

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGCATTTCGCAAAGCTCGATGATTCTCCTATGTTCCGCAAGCAGATACAGGGCATGGAGGACAGTGCCGAGTCATTGAGGGAGAGAAGTTTAAAGTTTTACAAAGGATGTCGAAAATACACTGAAGGTCTTGGGGAAGCTTATGATGGGGACATTGCTTTTGCTAGTGCCCTAGAAACATTTGGTGGGGGGCATAATGATCCAATTAGTGTCGCTTTTGGAGGCCCTGTTATGACCAAATTTACTATCGCATTAAGAGAAATTGGGACATACAAGGAAGTTCTTCGCTCCCAGGTTGAGCATATGCTAAATGACAGATTGTTACAATTTGTGAATTTTGATTTGCATGAGGTCAAGGAAGCGCGAAAACGTTTTGACAAGGCTAGCCTTCTTTATGACCAGGCTCGCGAAAAATTTCTCTCACTGAGAAAAGGAACAAGGAATGATGTAGCCACCATGGTAGAGGAGGAGCTTCATAATGCAAGGTCTACATTTGAGCAAGCTCGTTTTAGTCTTGTGACTGCTCTTTCTACTGTTGAAGCAAAAAAGAGGTTTGAGTTTCTGGAAGCGGTCAGTGGGACAATGGATGCCCATCTTCGTTACTTCAAACAGGGTTACGAGTTGTTGCATCAAATGGAACCCTATATTAATCAGGTCTTGACTTATGCTCAACAGTCAAGAGAAAGATCCAACTATGAACAGGCAGCTCTTAATGAAAGGATGCAAGATTACAAAAGACAGGTCGATAGAGAGAGTAGGTGGTCGTCCAATGGTTCTAATGGGTCTCCTAATGGAGATGGGATACAAGCTATTGGTAGAAGTTCACATAAAATGATAGAGGCTGTTATGCAATCTGCTGCAAAGGGAAAGGTTCAAACCATCAGGCAAGGTTATCTCTCAAAGAGGTCCTCAAACTTGAGGGGTGACTGGAAAAGAAGATTTTTTGTTCTTGATAGCCGAGGAATGCTCTATTACTATCGGAAACAAATCAGCAAATCATCATCTGGCTCTGGTAGTCAACTTTCTGGTCAGAGGAATAGTTCTGAGCTTGGTTCTGGACTGTTGAGTCGCTGGCTTTCTTCTCATTATCATGGTGGAGTGCATGATGAGAAATCTGTTGCTCATCACACAGTGAATCTGCTTACATCAACAATCAAAGTTGACGCTGACCAGTCGGACCTAAGATTTTGTTTCAGGATCATTTCACCAACAAAGAACTATACTTTGCAGGCAGAGAGTGCACTTGATCAAATGGATTGGATTGAAAAGATAACGGGGGTTATTGCTTCATTACTTAGTTCTCAGGCTCCTGAGAGGTTTCTGCCTGCTAGTCCCATGGGAAGCCATCGTCGTTCTGCCAGTGAGAGTAGTTCGTTTGAGAGTTCTGATTTTGATCACACTGCAGTTGAAGAACTTGCATCGGACAGGAGCGGCCTGAATAATGCTGACCACCGCCAATTAAGAAGTTCGCAACAGCAACGGTCTTCTTTAAGAAGTGAGAAGACAATTGACACTCTACGACGAGTATGTGGGAATGATAAATGTGCTGATTGTGGTGCCCCTGAGCCAGATTGGGCATCATTAAATCTTGGCGTTCTTGTTTGCATCGAATGTTCTGGTGTTCATCGTAACCTTGGTGTTCATATCTCAAAGGTAAGGTCTCTGACACTGGATGTCAAAGTATGGGAGCCTTCTGTCATTAATTTGTTTCAGTCATTGGGTAATGCCTTTGCAAACTCTGTCTGGGAGGAACTTTTGCAATCAAGAAGTGCTTTTCAGCTTGATCTTATAGCCACAGGGTCACATAAATCTGATAAAACACAGCTAGTTTTTATCAGCAAACCCAATCAGACTGATTCAATATCGGTAAAGGAGAAATTCATTCATGCAAAGTACGCAGACAAGCTTTTTGTAAGGAGGCCAAAGGATGGACAATATACTCATTTAGTGGCACAACAGATTTGGGAGGGTGTTCGTGCTAATGACAAGAAAGCTGTGTATCGTCACATTGTTAATTCTGAACCAGACGTGAATGCGGTGTATGAGCAAGCCTCGTGTGGCTCTTCCTTAACCCTTGCAAAAGTAATGCTGATGCAAGAGCAGACTAGCCATGACCAAAGCTCTAGCTGCTTAGCTGGGGATTCATTGGAGAGGTCTTCTGGTAGCTCTTCAAACTTGAGTGGTACAAGTGAAGTCCAGGCTATGGAGGATCTCGACGGGTGCACCCTTCTTCACCTTGCTTGTGAAACTGCAGACATTGGTATGCTTGAACTGCTCCTACAATATGGAGCAAATGTAAATGCGACTGATTCAAGAGGTCAAACACCACTCGACCGATGTATTCTCAAGGGCAGAAACACATTTGCAAAATTGCTTCTTACAAGGGGAGCGGATCCAAGAGCACTAAATGGGGAAGGTAAAACCCCCCTTGAGCTGGCAGTTGAGTCGAACTTTGATGATGGCGAGGTCCTTTCTATATTATCAGACTCCCGTGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0005096 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005798 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0007275 GO:0007389 GO:0008047 GO:0008150 GO:0008289 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009888 GO:0009965 GO:0010016 GO:0010033 GO:0010051 GO:0010087 GO:0012505 GO:0016020 GO:0016192 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030234 GO:0030695 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0035091 GO:0042221 GO:0043085 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050790 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0097708 GO:0098657 GO:0098772 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 Ank_5 ArfGap BAR_3 PH Pkinase

Protein Analysis

832

Amino Acids

92.85

Weight (kDa)

6.94

Isoelectric Point (pI)

54.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAR_3	PF16746	6 - 235	1.4e-39	BAR domain of APPL family
BAR	PF03114	27 - 216	2.6e-12	BAR domain
PH	PF00169	294 - 428	1.3e-11	PH domain
ArfGap	PF01412	501 - 639	5e-32	Putative GTPase activating protein for Arf
Ank_2	PF12796	736 - 800	3.3e-10	Ankyrin repeats (3 copies)
Ank_5	PF13857	737 - 779	1.1e-07	Ankyrin repeats (many copies)
Ank	PF00023	739 - 770	4.5e-07	Ankyrin repeat
Ank_4	PF13637	744 - 793	5e-07	Ankyrin repeats (many copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0008303)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13300
fragaria_vesca	FvH4_4g22770 FvH4_4g22770
malus_domestica	MD13G1129800.v1.1 MD16G1130100.v1.1
prunus_persica	Prupe.1G216500_v2.0.a1
pyrus_communis	pycom13g11290 pycom16g11080
rosa_chinensis	RchiOBHm_Chr4g0428991
rosa_laevigata	RLG00000007106
rosa_multiflora	Rmu_sc0008629.1_g000014
rosa_roxburghii	Rroxscaffold_5G00370650
rosa_rugosa	Rorug04G0231400 Rorug04G0231500 Rorug04G0231600 Rorug04G0231700 Rorug04G0231800
rosa_samantha	Rh4AG287900 Rh4BG293900 Rh4CG309500 Rh4DG290900
rosa_wichuraiana	Rw0G014080 Rw4G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1065
AccB1I	GGYRCC	1 cut(s)	1556
AccB7I	CCANNNNNTGG	2 cut(s)	1928, 2203
AccBSI	CCGCTC	2 cut(s)	1431, 2390
AccI	GTMKAC	1 cut(s)	488
AccII	CGCG	2 cut(s)	364, 408
AciI	CCGC	6 cut(s)	37, 569, 1431, 1453, 2036, 2390
AclI	AACGTT	1 cut(s)	370
AclWI	GGATC	6 cut(s)	194, 681, 1205, 2217, 2387, 2400
AcsI	RAATTY	4 cut(s)	239, 334, 413, 1877
AcuI	CTGAAG	1 cut(s)	144
AdeI	CACNNNGTG	1 cut(s)	1132
AfaI	GTAC	2 cut(s)	1895, 2185
AfiI	CCNNNNNNNGG	3 cut(s)	1928, 2203, 2434
AgsI	TTSAA	9 cut(s)	539, 607, 875, 1265, 1409, 1860, 2172, 2270, 2313
AjiI	CACGTC	1 cut(s)	2029
AjnI	CCWGG	3 cut(s)	291, 399, 2196
Alw21I	GWGCWC	3 cut(s)	1243, 2225, 2404
Alw26I	GTCTC	2 cut(s)	789, 1665
Alw44I	GTGCAC	2 cut(s)	1239, 2221
AlwI	GGATC	6 cut(s)	194, 681, 1205, 2217, 2387, 2400
AoxI	GGCC	3 cut(s)	223, 1432, 1919
ApaLI	GTGCAC	2 cut(s)	1239, 2221
ApeKI	GCWGC	3 cut(s)	704, 857, 2127
ApoI	RAATTY	4 cut(s)	239, 334, 413, 1877
ArsI	GACNNNNNNTTYG	8 cut(s)	143, 175, 726, 758, 1643, 1675, 1892, 1924
AseI	ATTAAT	2 cut(s)	648, 1701
Asp700I	GAANNNNTTC	2 cut(s)	282, 414
AspLEI	GCGC	1 cut(s)	364
AspS9I	GGNCC	4 cut(s)	224, 906, 1177, 2467
AsuHPI	GGTGA	3 cut(s)	935, 1197, 2225
AsuNHI	GCTAGC	1 cut(s)	383
AvaII	GGWCC	3 cut(s)	906, 1177, 2467
BaeGI	GKGCMC	4 cut(s)	172, 1243, 1561, 2225
BamHI	GGATCC	1 cut(s)	2392
BanI	GGYRCC	1 cut(s)	1556
BauI	CACGAG	1 cut(s)	2053
BbsI	GAAGAC	3 cut(s)	1476, 1508, 2148
Bbv12I	GWGCWC	3 cut(s)	1243, 2225, 2404
BbvI	GCAGC	3 cut(s)	716, 844, 2114
BccI	CCATC	7 cut(s)	140, 600, 791, 887, 1353, 1922, 2453
BcgI	CGANNNNNNTGC	2 cut(s)	2427, 2461
BciT130I	CCWGG	3 cut(s)	293, 401, 2198
BciVI	GTATCC	1 cut(s)	795
BclI	TGATCA	2 cut(s)	1246, 1393
BcoDI	GTCTC	2 cut(s)	789, 1665
BfaI	CTAG	7 cut(s)	165, 173, 384, 1329, 1826, 2106, 2124
BfmI	CTRYAG	2 cut(s)	1401, 2250
BfuI	GTATCC	1 cut(s)	795
BisI	GCNGC	4 cut(s)	705, 858, 1432, 2128
BlpI	GCTNAGC	1 cut(s)	2131
BlsI	GCNGC	4 cut(s)	706, 859, 1433, 2129
Bme1390I	CCNGG	3 cut(s)	293, 401, 2198
Bme18I	GGWCC	3 cut(s)	906, 1177, 2467
BmgBI	CACGTC	1 cut(s)	2029
BmgT120I	GGNCC	4 cut(s)	224, 906, 1177, 2467
BmiI	GGNNCC	5 cut(s)	639, 1308, 1558, 1689, 2394
BmrFI	CCNGG	3 cut(s)	293, 401, 2198
BmsI	GCATC	7 cut(s)	577, 637, 711, 1427, 1586, 1614, 2082
BmtI	GCTAGC	1 cut(s)	387
BpiI	GAAGAC	3 cut(s)	1476, 1508, 2148
BplI	GAGNNNNNCTC	4 cut(s)	951, 983, 2036, 2068
Bpu10I	CCTNAGC	1 cut(s)	1563
Bpu1102I	GCTNAGC	1 cut(s)	2131
BpuEI	CTTGAG	4 cut(s)	937, 2197, 2330, 2450
BsaBI	GATNNNNATC	2 cut(s)	591, 1392
BsaI	GGTCTC	2 cut(s)	789, 1665
BsaJI	CCNNGG	6 cut(s)	291, 456, 958, 1335, 1633, 2491
BsaXI	ACNNNNNCTCC	4 cut(s)	213, 243, 2280, 2310
Bsc4I	CCNNNNNNNGG	3 cut(s)	1928, 2203, 2434
Bse1I	ACTGG	4 cut(s)	932, 1171, 1359, 1674
Bse3DI	GCAATG	1 cut(s)	153
Bse8I	GATNNNNATC	2 cut(s)	591, 1392
BseBI	CCWGG	3 cut(s)	293, 401, 2198
BseDI	CCNNGG	6 cut(s)	291, 456, 958, 1335, 1633, 2491
BseGI	GGATG	5 cut(s)	113, 592, 726, 1678, 1933
BseJI	GATNNNNATC	2 cut(s)	591, 1392
BseLI	CCNNNNNNNGG	3 cut(s)	1928, 2203, 2434
BseMI	GCAATG	1 cut(s)	153
BseMII	CTCAG	5 cut(s)	416, 1035, 1302, 1316, 1554
BseNI	ACTGG	4 cut(s)	932, 1171, 1359, 1674
BseRI	GAGGAG	2 cut(s)	479, 482
BseSI	GKGCMC	4 cut(s)	172, 1243, 1561, 2225
BseXI	GCAGC	3 cut(s)	716, 844, 2114
BseYI	CCCAGC	1 cut(s)	2135
Bsh1236I	CGCG	2 cut(s)	364, 408
Bsh1285I	CGRYCG	1 cut(s)	2335
BshFI	GGCC	3 cut(s)	225, 1434, 1921
BshNI	GGYRCC	1 cut(s)	1556
BsiEI	CGRYCG	1 cut(s)	2335
BsiHKAI	GWGCWC	3 cut(s)	1243, 2225, 2404
BslFI	GGGAC	4 cut(s)	164, 280, 592, 1317
BslI	CCNNNNNNNGG	3 cut(s)	1928, 2203, 2434
BsmAI	GTCTC	2 cut(s)	789, 1665
BsmFI	GGGAC	4 cut(s)	164, 280, 592, 1317
BsmI	GAATGC	2 cut(s)	969, 2038
BsnI	GGCC	3 cut(s)	225, 1434, 1921
Bso31I	GGTCTC	2 cut(s)	789, 1665
Bsp1286I	GDGCHC	5 cut(s)	172, 1243, 1561, 2225, 2404
Bsp143I	GATC	8 cut(s)	199, 686, 1197, 1246, 1393, 1783, 2209, 2392
Bsp1720I	GCTNAGC	1 cut(s)	2131
Bsp19I	CCATGG	2 cut(s)	456, 1335
Bsp68I	TCGCGA	1 cut(s)	408
BspACI	CCGC	6 cut(s)	37, 569, 1431, 1453, 2036, 2390
BspANI	GGCC	3 cut(s)	225, 1434, 1921
BspCNI	CTCAG	5 cut(s)	417, 1036, 1303, 1315, 1555
BspFNI	CGCG	2 cut(s)	364, 408
BspLI	GGNNCC	5 cut(s)	639, 1308, 1558, 1689, 2394
BspMAI	CTGCAG	2 cut(s)	1405, 2254
BspOI	GCTAGC	1 cut(s)	387
BspPI	GGATC	6 cut(s)	194, 681, 1205, 2217, 2387, 2400
BspQI	GCTCTTC	2 cut(s)	2068, 2173
BspT107I	GGYRCC	1 cut(s)	1556
BspTNI	GGTCTC	2 cut(s)	789, 1665
BsrBI	CCGCTC	2 cut(s)	1431, 2390
BsrDI	GCAATG	1 cut(s)	153
BsrI	ACTGG	4 cut(s)	932, 1171, 1359, 1674
BssECI	CCNNGG	6 cut(s)	291, 456, 958, 1335, 1633, 2491
BssMI	GATC	8 cut(s)	199, 686, 1197, 1246, 1393, 1783, 2209, 2392
BssSI	CACGAG	1 cut(s)	2053
BssT1I	CCWWGG	3 cut(s)	456, 1335, 1633
Bst2BI	CACGAG	1 cut(s)	2053
Bst2UI	CCWGG	3 cut(s)	293, 401, 2198
Bst4CI	ACNGT	6 cut(s)	65, 535, 675, 1062, 1132, 1482
Bst6I	CTCTTC	2 cut(s)	2068, 2173
BstAPI	GCANNNNNTGC	1 cut(s)	1238
BstC8I	GCNNGC	9 cut(s)	41, 385, 406, 501, 1073, 1230, 1326, 2049, 2436
BstDEI	CTNAG	8 cut(s)	425, 1044, 1181, 1295, 1302, 1311, 1563, 2131
BstDSI	CCRYGG	3 cut(s)	456, 1335, 2491
BstF5I	GGATG	5 cut(s)	113, 592, 726, 1678, 1933
BstFNI	CGCG	2 cut(s)	364, 408
BstHHI	GCGC	1 cut(s)	364
BstKTI	GATC	8 cut(s)	202, 689, 1200, 1249, 1396, 1786, 2212, 2395
BstMAI	GTCTC	2 cut(s)	789, 1665
BstMBI	GATC	8 cut(s)	199, 686, 1197, 1246, 1393, 1783, 2209, 2392
BstMCI	CGRYCG	1 cut(s)	2335
BstMWI	GCNNNNNNNGC	4 cut(s)	1238, 1895, 2127, 2272
BstNI	CCWGG	3 cut(s)	293, 401, 2198
BstSCI	CCNGG	3 cut(s)	291, 399, 2196
BstSFI	CTRYAG	2 cut(s)	1401, 2250
BstSLI	GKGCMC	4 cut(s)	172, 1243, 1561, 2225
BstUI	CGCG	2 cut(s)	364, 408
BstV1I	GCAGC	3 cut(s)	716, 844, 2114
BstV2I	GAAGAC	3 cut(s)	1476, 1508, 2148
BstX2I	RGATCY	3 cut(s)	686, 2209, 2392
BstYI	RGATCY	3 cut(s)	686, 2209, 2392
BsuI	GTATCC	1 cut(s)	795
BsuRI	GGCC	3 cut(s)	225, 1434, 1921
BtgI	CCRYGG	3 cut(s)	456, 1335, 2491
BtrI	CACGTC	1 cut(s)	2029
BtsCI	GGATG	5 cut(s)	113, 592, 726, 1678, 1933
BtsI	GCAGTG	1 cut(s)	1398
BtsIMutI	CAGTG	8 cut(s)	70, 120, 422, 580, 1137, 1366, 1398, 1667
BtuMI	TCGCGA	1 cut(s)	408
Cac8I	GCNNGC	9 cut(s)	41, 385, 406, 501, 1073, 1230, 1326, 2049, 2436
CfoI	GCGC	1 cut(s)	364
Cfr13I	GGNCC	4 cut(s)	224, 906, 1177, 2467
CseI	GACGC	1 cut(s)	1172
Csp6I	GTAC	2 cut(s)	1894, 2184
CviAII	CATG	8 cut(s)	55, 347, 457, 1091, 1103, 1336, 1886, 2111
CviQI	GTAC	2 cut(s)	1894, 2184
DdeI	CTNAG	8 cut(s)	425, 1044, 1181, 1295, 1302, 1311, 1563, 2131
DpnI	GATC	8 cut(s)	201, 688, 1199, 1248, 1395, 1785, 2211, 2394
DpnII	GATC	8 cut(s)	199, 686, 1197, 1246, 1393, 1783, 2209, 2392
DraI	TTTAAA	1 cut(s)	93
DraIII	CACNNNGTG	1 cut(s)	1132
DrdI	GACNNNNNNGTC	1 cut(s)	1065
DseDI	GACNNNNNNGTC	1 cut(s)	1065
Eam1104I	CTCTTC	2 cut(s)	2068, 2173
EarI	CTCTTC	2 cut(s)	2068, 2173
Eco130I	CCWWGG	3 cut(s)	456, 1335, 1633
Eco31I	GGTCTC	2 cut(s)	789, 1665
Eco47I	GGWCC	3 cut(s)	906, 1177, 2467
Eco57I	CTGAAG	1 cut(s)	144
EcoO109I	RGGNCCY	3 cut(s)	224, 906, 2467
EcoRII	CCWGG	3 cut(s)	291, 399, 2196
EcoT14I	CCWWGG	3 cut(s)	456, 1335, 1633
EcoT22I	ATGCAT	1 cut(s)	6
ErhI	CCWWGG	3 cut(s)	456, 1335, 1633
FaeI	CATG	8 cut(s)	58, 350, 460, 1094, 1106, 1339, 1889, 2114
FalI	AAGNNNNNCTT	2 cut(s)	1756, 1788
FaqI	GGGAC	4 cut(s)	164, 280, 592, 1317
FatI	CATG	8 cut(s)	54, 346, 456, 1090, 1102, 1335, 1885, 2110
FauNDI	CATATG	1 cut(s)	303
FbaI	TGATCA	2 cut(s)	1246, 1393
FblI	GTMKAC	1 cut(s)	488
Fnu4HI	GCNGC	4 cut(s)	705, 858, 1432, 2128
FokI	GGATG	5 cut(s)	120, 599, 733, 1685, 1940
Fsp4HI	GCNGC	4 cut(s)	705, 858, 1432, 2128
FspBI	CTAG	7 cut(s)	165, 173, 384, 1329, 1826, 2106, 2124
GlaI	GCGC	1 cut(s)	363
GluI	GCNGC	4 cut(s)	705, 858, 1432, 2128
GsaI	CCCAGC	1 cut(s)	2139
HaeIII	GGCC	3 cut(s)	225, 1434, 1921
HgaI	GACGC	1 cut(s)	1172
HhaI	GCGC	1 cut(s)	364
Hin1II	CATG	8 cut(s)	58, 350, 460, 1094, 1106, 1339, 1889, 2114
Hin6I	GCGC	1 cut(s)	362
HinP1I	GCGC	1 cut(s)	362
HincII	GTYRAC	2 cut(s)	1019, 1162
HindII	GTYRAC	2 cut(s)	1019, 1162
HindIII	AAGCTT	2 cut(s)	138, 1904
HinfI	GANTC	9 cut(s)	23, 71, 1066, 1135, 1856, 2141, 2309, 2444, 2486
HphI	GGTGA	3 cut(s)	935, 1197, 2225
Hpy166II	GTNNAC	6 cut(s)	489, 824, 1019, 1162, 1241, 2223
Hpy8I	GTNNAC	6 cut(s)	489, 824, 1019, 1162, 1241, 2223
Hpy99I	CGWCG	3 cut(s)	1353, 1524, 2219
HpyAV	CCTTC	5 cut(s)	119, 398, 1701, 2237, 2408
HpyCH4III	ACNGT	6 cut(s)	65, 535, 675, 1062, 1132, 1482
HpyCH4IV	ACGT	2 cut(s)	370, 2028
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1238, 1895, 2127, 2272
HpyF3I	CTNAG	8 cut(s)	425, 1044, 1181, 1295, 1302, 1311, 1563, 2131
HpySE526I	ACGT	2 cut(s)	370, 2028
Hsp92II	CATG	8 cut(s)	58, 350, 460, 1094, 1106, 1339, 1889, 2114
HspAI	GCGC	1 cut(s)	362
Ksp22I	TGATCA	2 cut(s)	1246, 1393
Kzo9I	GATC	8 cut(s)	199, 686, 1197, 1246, 1393, 1783, 2209, 2392
LguI	GCTCTTC	2 cut(s)	2068, 2173
LmnI	GCTCC	8 cut(s)	293, 469, 1312, 1428, 1687, 2280, 2288, 2387
Lsp1109I	GCAGC	3 cut(s)	716, 844, 2114
LweI	GCATC	7 cut(s)	577, 637, 711, 1427, 1586, 1614, 2082
MaeI	CTAG	7 cut(s)	165, 173, 384, 1329, 1826, 2106, 2124
MaeII	ACGT	2 cut(s)	370, 2028
MaeIII	GTNAC	8 cut(s)	321, 517, 599, 614, 923, 1628, 1800, 2003
MalI	GATC	8 cut(s)	201, 688, 1199, 1248, 1395, 1785, 2211, 2394
MbiI	CCGCTC	2 cut(s)	1431, 2390
MboI	GATC	8 cut(s)	199, 686, 1197, 1246, 1393, 1783, 2209, 2392
MfeI	CAATTG	1 cut(s)	1506
MflI	RGATCY	3 cut(s)	686, 2209, 2392
MhlI	GDGCHC	5 cut(s)	172, 1243, 1561, 2225, 2404
MlyI	GAGTC	4 cut(s)	80, 1075, 2453, 2480
MmeI	TCCRAC	2 cut(s)	714, 1155
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	2 cut(s)	282, 414
MslI	CAYNNNNRTG	2 cut(s)	1089, 2261
MspR9I	CCNGG	3 cut(s)	293, 401, 2198
MunI	CAATTG	1 cut(s)	1506
Mva1269I	GAATGC	2 cut(s)	969, 2038
MvaI	CCWGG	3 cut(s)	293, 401, 2198
MvnI	CGCG	2 cut(s)	364, 408
MwoI	GCNNNNNNNGC	4 cut(s)	1238, 1895, 2127, 2272
NcoI	CCATGG	2 cut(s)	456, 1335
NdeI	CATATG	1 cut(s)	303
NdeII	GATC	8 cut(s)	199, 686, 1197, 1246, 1393, 1783, 2209, 2392
NheI	GCTAGC	1 cut(s)	383
NlaIII	CATG	8 cut(s)	58, 350, 460, 1094, 1106, 1339, 1889, 2114
NlaIV	GGNNCC	5 cut(s)	639, 1308, 1558, 1689, 2394
NmeAIII	GCCGAG	2 cut(s)	94, 983
NmuCI	GTSAC	4 cut(s)	517, 923, 1800, 2003
NruI	TCGCGA	1 cut(s)	408
NsiI	ATGCAT	1 cut(s)	6
PciSI	GCTCTTC	2 cut(s)	2068, 2173
PcsI	WCGNNNNNNNCGW	1 cut(s)	15
PctI	GAATGC	2 cut(s)	969, 2038
PdmI	GAANNNNTTC	2 cut(s)	282, 414
PfeI	GAWTC	5 cut(s)	23, 1135, 1856, 2141, 2309
PflMI	CCANNNNNTGG	2 cut(s)	1928, 2203
PkrI	GCNGC	4 cut(s)	706, 859, 1433, 2129
PleI	GAGTC	4 cut(s)	79, 1074, 2452, 2480
PpsI	GAGTC	4 cut(s)	79, 1074, 2452, 2480
PpuMI	RGGWCCY	2 cut(s)	906, 2467
PshBI	ATTAAT	2 cut(s)	648, 1701
Psp1406I	AACGTT	1 cut(s)	370
Psp5II	RGGWCCY	2 cut(s)	906, 2467
Psp6I	CCWGG	3 cut(s)	291, 399, 2196
PspFI	CCCAGC	1 cut(s)	2135
PspGI	CCWGG	3 cut(s)	291, 399, 2196
PspN4I	GGNNCC	5 cut(s)	639, 1308, 1558, 1689, 2394
PspPI	GGNCC	4 cut(s)	224, 906, 1177, 2467
PspPPI	RGGWCCY	2 cut(s)	906, 2467
PsrI	GAACNNNNNNTAC	2 cut(s)	2262, 2294
PstI	CTGCAG	2 cut(s)	1405, 2254
PsuI	RGATCY	3 cut(s)	686, 2209, 2392
RruI	TCGCGA	1 cut(s)	408
RsaI	GTAC	2 cut(s)	1895, 2185
RsaNI	GTAC	2 cut(s)	1894, 2184
RseI	CAYNNNNRTG	2 cut(s)	1089, 2261
SapI	GCTCTTC	2 cut(s)	2068, 2173
SatI	GCNGC	4 cut(s)	705, 858, 1432, 2128
Sau3AI	GATC	8 cut(s)	199, 686, 1197, 1246, 1393, 1783, 2209, 2392
Sau96I	GGNCC	4 cut(s)	224, 906, 1177, 2467
SchI	GAGTC	4 cut(s)	80, 1075, 2453, 2480
ScrFI	CCNGG	3 cut(s)	293, 401, 2198
SduI	GDGCHC	5 cut(s)	172, 1243, 1561, 2225, 2404
SfaNI	GCATC	7 cut(s)	577, 637, 711, 1427, 1586, 1614, 2082
SfcI	CTRYAG	2 cut(s)	1401, 2250
SinI	GGWCC	3 cut(s)	906, 1177, 2467
SmiMI	CAYNNNNRTG	2 cut(s)	1089, 2261
SmlI	CTYRAG	4 cut(s)	916, 2176, 2345, 2429
SmoI	CTYRAG	4 cut(s)	916, 2176, 2345, 2429
SsiI	CCGC	6 cut(s)	37, 569, 1431, 1453, 2036, 2390
SspMI	CTAG	7 cut(s)	165, 173, 384, 1329, 1826, 2106, 2124
StyD4I	CCNGG	3 cut(s)	291, 399, 2196
StyI	CCWWGG	3 cut(s)	456, 1335, 1633
TaaI	ACNGT	6 cut(s)	65, 535, 675, 1062, 1132, 1482
TaiI	ACGT	2 cut(s)	373, 2031
TaqI	TCGA	7 cut(s)	18, 112, 744, 1608, 2214, 2331, 2447
TaqII	GACCGA	1 cut(s)	2349
TauI	GCSGC	1 cut(s)	1434
TfiI	GAWTC	5 cut(s)	23, 1135, 1856, 2141, 2309
TscAI	CASTG	8 cut(s)	70, 127, 429, 580, 1137, 1366, 1405, 1674
TseFI	GTSAC	4 cut(s)	517, 923, 1800, 2003
TseI	GCWGC	3 cut(s)	704, 857, 2127
Tsp45I	GTSAC	4 cut(s)	517, 923, 1800, 2003
TspDTI	ATGAA	9 cut(s)	464, 711, 729, 1278, 1613, 1631, 1870, 1874, 2133
TspRI	CASTG	8 cut(s)	70, 127, 429, 580, 1137, 1366, 1405, 1674
Van91I	CCANNNNNTGG	2 cut(s)	1928, 2203
VneI	GTGCAC	2 cut(s)	1239, 2221
VpaK11BI	GGWCC	3 cut(s)	906, 1177, 2467
VspI	ATTAAT	2 cut(s)	648, 1701
XapI	RAATTY	4 cut(s)	239, 334, 413, 1877
XmiI	GTMKAC	1 cut(s)	488
XmnI	GAANNNNTTC	2 cut(s)	282, 414
XspI	CTAG	7 cut(s)	165, 173, 384, 1329, 1826, 2106, 2124
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.