AT5G14130

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0003993
Physical Location & Seq
Reverse (-)
4558704 .. 4560315
1612 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G14130.2

Sequence Viewer

Length: 993 bp
ATGGATATTCGTAGTGATGATGCAAAAAAACCTATGATGATGTGGTTCTTAGGGATGCTGTTGTTTTCCATGGTGGCCGAGTCAAATGCTCAACTGTCAGAGAATTACTACGCCTCGACATGTCCTAGCGTAGAGCTCATCGTTAAGCAGGCGGTTACTACAAAATTCAAACAAACTGTCACAACGGCTCCTGCAACGTTGCGGATGTTCTTTCACGACTGCTTCGTCGAGGGATGTGATGCGTCTGTGTTTATAGCATCTGAGAATGAAGACGCAGAGAAAGACGCAGATGACAATAAATCTCTCGCCGGAGACGGATTTGACACCGTGATTAAAGCTAAAACCGCTGTAGAATCTCAATGTCCCGGAGTTGTGTCATGTGCCGATATACTAGCTCTCGCCGCTAGAGACGTCGTCGTGCTCGTTGGAGGGCCAGAGTTTAAGGTGGAGCTAGGGAGACGAGACGGGCTCGTGTCGAAAGCGTCTAGAGTGACCGGCAAGTTACCTGAACCAGGGCTTGACGTGAGAGGTCTAGTCCAGATCTTCGCTAGTAACGGGCTTTCATTGACCGACATGATCGCTCTTTCAGGCGCACATACAATTGGATCCTCTCACTGCAACCGTTTCGCCAACCGTCTCCACAATTTCTCGACGTTCATGCCAGTGGACCCTACGATGGACCCGGTCTACGCTCAGCAGCTGATACAAGCCTGCTCTGACCCCAACCCAGATGCTGTAGTAGACATTGACCTAACGTCCAGAGATACCTTCGACAATAGCTACTACCAGAACCTCGTGGCTCGGAAAGGACTTTTCACCTCCGATCAAGCTCTGTTTAACGATCTCTCGTCTCAGGCTACGGTGGTCAGGTTTGCTAACAACGCTGAAGAATTCTACAGCGCTTTTAGCTCTGCTATGAGGAATCTTGGCCGCGTTGGGGTTAAGGTTGGGAATCAAGGCGAGATTCGAAGGGACTGCTCTGCTTTTAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
peroxidase

Protein Analysis

330

Amino Acids

35.86

Weight (kDa)

4.88

Isoelectric Point (pI)

32.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 89 - 335 3e-83 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 224
AatII GACGTC 1 cut(s) 414
AccI GTMKAC 2 cut(s) 687, 741
AccII CGCG 1 cut(s) 933
AciI CCGC 5 cut(s) 152, 202, 345, 402, 931
AclI AACGTT 1 cut(s) 197
AclWI GGATC 2 cut(s) 600, 613
AcoI YGGCCR 2 cut(s) 75, 928
AcsI RAATTY 2 cut(s) 164, 890
AcuI CTGAAG 1 cut(s) 906
AcyI GRCGYC 1 cut(s) 411
AfeI AGCGCT 1 cut(s) 901
AfiI CCNNNNNNNGG 3 cut(s) 512, 676, 937
AflIII ACRYGT 1 cut(s) 119
AgsI TTSAA 1 cut(s) 169
AhdI GACNNNNNGTC 1 cut(s) 754
AjiI CACGTC 1 cut(s) 523
AjnI CCWGG 1 cut(s) 511
AluBI AGCT 8 cut(s) 136, 338, 395, 451, 700, 780, 830, 909
AluI AGCT 8 cut(s) 136, 338, 395, 451, 700, 780, 830, 909
Alw21I GWGCWC 2 cut(s) 138, 423
Alw26I GTCTC 6 cut(s) 306, 402, 451, 456, 641, 855
AlwI GGATC 2 cut(s) 600, 613
AlwNI CAGNNNCTG 2 cut(s) 700, 734
Aor51HI AGCGCT 1 cut(s) 901
AoxI GGCC 3 cut(s) 75, 431, 928
ApeKI GCWGC 1 cut(s) 697
ApoI RAATTY 2 cut(s) 164, 890
ArsI GACNNNNNNTTYG 2 cut(s) 162, 194
AspLEI GCGC 2 cut(s) 593, 902
AspS9I GGNCC 3 cut(s) 431, 667, 679
AsuC2I CCSGG 2 cut(s) 366, 683
AsuHPI GGTGA 1 cut(s) 808
AsuII TTCGAA 1 cut(s) 967
AvaII GGWCC 2 cut(s) 667, 679
BamHI GGATCC 1 cut(s) 605
BanII GRGCYC 2 cut(s) 138, 471
BauI CACGAG 2 cut(s) 470, 794
BbsI GAAGAC 1 cut(s) 276
Bbv12I GWGCWC 2 cut(s) 138, 423
BbvI GCAGC 1 cut(s) 709
BccI CCATC 1 cut(s) 670
BceAI ACGGC 1 cut(s) 201
BcgI CGANNNNNNTGC 8 cut(s) 68, 102, 607, 640, 641, 674, 957, 991
BciT130I CCWGG 1 cut(s) 513
BcnI CCSGG 2 cut(s) 366, 683
BcoDI GTCTC 6 cut(s) 306, 402, 451, 456, 641, 855
BfaI CTAG 8 cut(s) 126, 392, 405, 452, 486, 533, 549, 991
BfmI CTRYAG 3 cut(s) 348, 735, 895
BfoI RGCGCY 1 cut(s) 903
BglII AGATCT 1 cut(s) 540
BisI GCNGC 3 cut(s) 402, 698, 931
BlpI GCTNAGC 1 cut(s) 693
BlsI GCNGC 3 cut(s) 403, 699, 932
Bme1390I CCNGG 3 cut(s) 366, 513, 683
Bme18I GGWCC 2 cut(s) 667, 679
BmeRI GACNNNNNGTC 1 cut(s) 754
BmgBI CACGTC 1 cut(s) 523
BmgT120I GGNCC 3 cut(s) 431, 667, 679
BmiI GGNNCC 4 cut(s) 189, 607, 669, 681
BmrFI CCNGG 3 cut(s) 366, 513, 683
BmsI GCATC 5 cut(s) 10, 45, 229, 266, 721
BpiI GAAGAC 1 cut(s) 276
BplI GAGNNNNNCTC 2 cut(s) 453, 485
Bpu1102I GCTNAGC 1 cut(s) 693
Bpu14I TTCGAA 1 cut(s) 967
BpuMI CCSGG 2 cut(s) 366, 683
BsaHI GRCGYC 1 cut(s) 411
BsaJI CCNNGG 2 cut(s) 69, 512
BsaXI ACNNNNNCTCC 2 cut(s) 172, 202
Bsc4I CCNNNNNNNGG 3 cut(s) 512, 676, 937
Bse118I RCCGGY 1 cut(s) 494
Bse1I ACTGG 1 cut(s) 662
BseBI CCWGG 1 cut(s) 513
BseDI CCNNGG 2 cut(s) 69, 512
BseGI GGATG 3 cut(s) 60, 210, 239
BseLI CCNNNNNNNGG 3 cut(s) 512, 676, 937
BseMII CTCAG 3 cut(s) 252, 707, 866
BseNI ACTGG 1 cut(s) 662
BseXI GCAGC 1 cut(s) 709
Bsh1236I CGCG 1 cut(s) 933
BshFI GGCC 3 cut(s) 77, 433, 930
BsiHKAI GWGCWC 2 cut(s) 138, 423
BsiSI CCGG 4 cut(s) 309, 366, 495, 683
BslFI GGGAC 2 cut(s) 348, 986
BslI CCNNNNNNNGG 3 cut(s) 512, 676, 937
BsmAI GTCTC 6 cut(s) 306, 402, 451, 456, 641, 855
BsmBI CGTCTC 6 cut(s) 306, 402, 451, 456, 641, 855
BsmFI GGGAC 2 cut(s) 348, 986
BsnI GGCC 3 cut(s) 77, 433, 930
Bsp119I TTCGAA 1 cut(s) 967
Bsp1286I GDGCHC 3 cut(s) 138, 423, 471
Bsp143I GATC 5 cut(s) 540, 576, 605, 823, 841
Bsp1720I GCTNAGC 1 cut(s) 693
Bsp19I CCATGG 1 cut(s) 69
BspACI CCGC 5 cut(s) 152, 202, 345, 402, 931
BspANI GGCC 3 cut(s) 77, 433, 930
BspCNI CTCAG 3 cut(s) 253, 706, 865
BspFNI CGCG 1 cut(s) 933
BspLI GGNNCC 4 cut(s) 189, 607, 669, 681
BspPI GGATC 2 cut(s) 600, 613
BspT104I TTCGAA 1 cut(s) 967
BsrFI RCCGGY 1 cut(s) 494
BsrI ACTGG 1 cut(s) 662
BssAI RCCGGY 1 cut(s) 494
BssECI CCNNGG 2 cut(s) 69, 512
BssMI GATC 5 cut(s) 540, 576, 605, 823, 841
BssNI GRCGYC 1 cut(s) 411
BssSI CACGAG 2 cut(s) 470, 794
BssT1I CCWWGG 1 cut(s) 69
Bst2BI CACGAG 2 cut(s) 470, 794
Bst2UI CCWGG 1 cut(s) 513
Bst4CI ACNGT 6 cut(s) 96, 178, 328, 623, 635, 862
BstACI GRCGYC 1 cut(s) 411
BstBI TTCGAA 1 cut(s) 967
BstC8I GCNNGC 2 cut(s) 150, 712
BstDEI CTNAG 4 cut(s) 49, 261, 693, 852
BstDSI CCRYGG 1 cut(s) 69
BstENI CCTNNNNNAGG 1 cut(s) 510
BstF5I GGATG 3 cut(s) 60, 210, 239
BstFNI CGCG 1 cut(s) 933
BstH2I RGCGCY 1 cut(s) 903
BstHHI GCGC 2 cut(s) 593, 902
BstKTI GATC 5 cut(s) 543, 579, 608, 826, 844
BstMAI GTCTC 6 cut(s) 306, 402, 451, 456, 641, 855
BstMBI GATC 5 cut(s) 540, 576, 605, 823, 841
BstMWI GCNNNNNNNGC 4 cut(s) 344, 401, 881, 906
BstNI CCWGG 1 cut(s) 513
BstNSI RCATGY 1 cut(s) 123
BstSCI CCNGG 3 cut(s) 364, 511, 681
BstSFI CTRYAG 3 cut(s) 348, 735, 895
BstUI CGCG 1 cut(s) 933
BstV1I GCAGC 1 cut(s) 709
BstV2I GAAGAC 1 cut(s) 276
BstX2I RGATCY 2 cut(s) 540, 605
BstYI RGATCY 2 cut(s) 540, 605
BsuRI GGCC 3 cut(s) 77, 433, 930
BtgI CCRYGG 1 cut(s) 69
BtrI CACGTC 1 cut(s) 523
BtsCI GGATG 3 cut(s) 60, 210, 239
BtsI GCAGTG 1 cut(s) 613
BtsIMutI CAGTG 2 cut(s) 613, 669
Cac8I GCNNGC 2 cut(s) 150, 712
CaiI CAGNNNCTG 2 cut(s) 700, 734
CfoI GCGC 2 cut(s) 593, 902
Cfr10I RCCGGY 1 cut(s) 494
Cfr13I GGNCC 3 cut(s) 431, 667, 679
CseI GACGC 4 cut(s) 231, 281, 293, 471
CviAII CATG 5 cut(s) 70, 120, 378, 574, 658
DdeI CTNAG 4 cut(s) 49, 261, 693, 852
DpnI GATC 5 cut(s) 542, 578, 607, 825, 843
DpnII GATC 5 cut(s) 540, 576, 605, 823, 841
DrdI GACNNNNNNGTC 1 cut(s) 224
DriI GACNNNNNGTC 1 cut(s) 754
DseDI GACNNNNNNGTC 1 cut(s) 224
EaeI YGGCCR 2 cut(s) 75, 928
Eam1105I GACNNNNNGTC 1 cut(s) 754
Ecl136II GAGCTC 1 cut(s) 136
Eco130I CCWWGG 1 cut(s) 69
Eco24I GRGCYC 2 cut(s) 138, 471
Eco47I GGWCC 2 cut(s) 667, 679
Eco47III AGCGCT 1 cut(s) 901
Eco53kI GAGCTC 1 cut(s) 136
Eco57I CTGAAG 1 cut(s) 906
EcoICRI GAGCTC 1 cut(s) 136
EcoNI CCTNNNNNAGG 1 cut(s) 510
EcoRI GAATTC 1 cut(s) 890
EcoRII CCWGG 1 cut(s) 511
EcoT14I CCWWGG 1 cut(s) 69
EcoT38I GRGCYC 2 cut(s) 138, 471
ErhI CCWWGG 1 cut(s) 69
Esp3I CGTCTC 6 cut(s) 306, 402, 451, 456, 641, 855
FaeI CATG 5 cut(s) 73, 123, 381, 577, 661
FaqI GGGAC 2 cut(s) 348, 986
FatI CATG 5 cut(s) 69, 119, 377, 573, 657
FblI GTMKAC 2 cut(s) 687, 741
Fnu4HI GCNGC 3 cut(s) 402, 698, 931
FokI GGATG 3 cut(s) 67, 217, 246
FriOI GRGCYC 2 cut(s) 138, 471
Fsp4HI GCNGC 3 cut(s) 402, 698, 931
FspBI CTAG 8 cut(s) 126, 392, 405, 452, 486, 533, 549, 991
GlaI GCGC 2 cut(s) 592, 901
GluI GCNGC 3 cut(s) 402, 698, 931
HaeII RGCGCY 1 cut(s) 903
HaeIII GGCC 3 cut(s) 77, 433, 930
HapII CCGG 4 cut(s) 309, 366, 495, 683
HgaI GACGC 4 cut(s) 231, 281, 293, 471
HhaI GCGC 2 cut(s) 593, 902
Hin1I GRCGYC 1 cut(s) 411
Hin1II CATG 5 cut(s) 73, 123, 381, 577, 661
Hin6I GCGC 2 cut(s) 591, 900
HinP1I GCGC 2 cut(s) 591, 900
HinfI GANTC 5 cut(s) 80, 353, 922, 952, 964
HpaII CCGG 4 cut(s) 309, 366, 495, 683
HphI GGTGA 1 cut(s) 808
Hpy166II GTNNAC 3 cut(s) 667, 688, 742
Hpy188I TCNGA 5 cut(s) 100, 262, 718, 804, 823
Hpy188III TCNNGA 5 cut(s) 215, 486, 538, 649, 759
Hpy8I GTNNAC 3 cut(s) 667, 688, 742
Hpy99I CGWCG 4 cut(s) 230, 416, 419, 655
HpyAV CCTTC 2 cut(s) 778, 963
HpyCH4III ACNGT 6 cut(s) 96, 178, 328, 623, 635, 862
HpyCH4IV ACGT 5 cut(s) 197, 411, 522, 653, 755
HpyCH4V TGCA 3 cut(s) 23, 194, 618
HpyF10VI GCNNNNNNNGC 4 cut(s) 344, 401, 881, 906
HpyF3I CTNAG 4 cut(s) 49, 261, 693, 852
HpySE526I ACGT 5 cut(s) 197, 411, 522, 653, 755
Hsp92I GRCGYC 1 cut(s) 411
Hsp92II CATG 5 cut(s) 73, 123, 381, 577, 661
HspAI GCGC 2 cut(s) 591, 900
Kzo9I GATC 5 cut(s) 540, 576, 605, 823, 841
LmnI GCTCC 2 cut(s) 193, 448
Lsp1109I GCAGC 1 cut(s) 709
LweI GCATC 5 cut(s) 10, 45, 229, 266, 721
MaeI CTAG 8 cut(s) 126, 392, 405, 452, 486, 533, 549, 991
MaeII ACGT 5 cut(s) 197, 411, 522, 653, 755
MaeIII GTNAC 5 cut(s) 154, 178, 490, 501, 551
MalI GATC 5 cut(s) 542, 578, 607, 825, 843
MboI GATC 5 cut(s) 540, 576, 605, 823, 841
MboII GAAGA 3 cut(s) 281, 535, 899
MfeI CAATTG 1 cut(s) 600
MflI RGATCY 2 cut(s) 540, 605
MhlI GDGCHC 3 cut(s) 138, 423, 471
MluCI AATT 5 cut(s) 103, 164, 600, 643, 890
MlyI GAGTC 1 cut(s) 89
MmeI TCCRAC 1 cut(s) 406
MnlI CCTC 8 cut(s) 124, 223, 422, 521, 619, 803, 829, 912
MseI TTAA 6 cut(s) 144, 333, 441, 837, 942, 987
MslI CAYNNNNRTG 1 cut(s) 662
MspA1I CMGCKG 2 cut(s) 347, 700
MspI CCGG 4 cut(s) 309, 366, 495, 683
MspR9I CCNGG 3 cut(s) 366, 513, 683
MunI CAATTG 1 cut(s) 600
MvaI CCWGG 1 cut(s) 513
MvnI CGCG 1 cut(s) 933
MwoI GCNNNNNNNGC 4 cut(s) 344, 401, 881, 906
NciI CCSGG 2 cut(s) 366, 683
NcoI CCATGG 1 cut(s) 69
NdeII GATC 5 cut(s) 540, 576, 605, 823, 841
NlaIII CATG 5 cut(s) 73, 123, 381, 577, 661
NlaIV GGNNCC 4 cut(s) 189, 607, 669, 681
NmeAIII GCCGAG 1 cut(s) 103
NmuCI GTSAC 2 cut(s) 178, 490
NspI RCATGY 1 cut(s) 123
NspV TTCGAA 1 cut(s) 967
PciI ACATGT 1 cut(s) 119
PcsI WCGNNNNNNNCGW 2 cut(s) 222, 420
PfeI GAWTC 4 cut(s) 353, 922, 952, 964
PflFI GACNNNGTC 2 cut(s) 413, 683
PfoI TCCNGGA 1 cut(s) 364
PkrI GCNGC 3 cut(s) 403, 699, 932
PleI GAGTC 1 cut(s) 88
PpsI GAGTC 1 cut(s) 88
PscI ACATGT 1 cut(s) 119
Psp124BI GAGCTC 1 cut(s) 138
Psp1406I AACGTT 1 cut(s) 197
Psp6I CCWGG 1 cut(s) 511
PspGI CCWGG 1 cut(s) 511
PspN4I GGNNCC 4 cut(s) 189, 607, 669, 681
PspPI GGNCC 3 cut(s) 431, 667, 679
PstNI CAGNNNCTG 2 cut(s) 700, 734
PsuI RGATCY 2 cut(s) 540, 605
PsyI GACNNNGTC 2 cut(s) 413, 683
PvuII CAGCTG 1 cut(s) 700
RseI CAYNNNNRTG 1 cut(s) 662
SacI GAGCTC 1 cut(s) 138
SaqAI TTAA 6 cut(s) 144, 333, 441, 837, 942, 987
SatI GCNGC 3 cut(s) 402, 698, 931
Sau3AI GATC 5 cut(s) 540, 576, 605, 823, 841
Sau96I GGNCC 3 cut(s) 431, 667, 679
SchI GAGTC 1 cut(s) 89
ScrFI CCNGG 3 cut(s) 366, 513, 683
SduI GDGCHC 3 cut(s) 138, 423, 471
SfaNI GCATC 5 cut(s) 10, 45, 229, 266, 721
SfcI CTRYAG 3 cut(s) 348, 735, 895
SfuI TTCGAA 1 cut(s) 967
SinI GGWCC 2 cut(s) 667, 679
SmiMI CAYNNNNRTG 1 cut(s) 662
Sse9I AATT 5 cut(s) 103, 164, 600, 643, 890
SsiI CCGC 5 cut(s) 152, 202, 345, 402, 931
SspMI CTAG 8 cut(s) 126, 392, 405, 452, 486, 533, 549, 991
SstI GAGCTC 1 cut(s) 138
StyD4I CCNGG 3 cut(s) 364, 511, 681
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 6 cut(s) 96, 178, 328, 623, 635, 862
TaiI ACGT 5 cut(s) 200, 414, 525, 656, 758
TaqI TCGA 6 cut(s) 116, 228, 476, 650, 771, 967
TaqII GACCGA 1 cut(s) 584
TasI AATT 5 cut(s) 103, 164, 600, 643, 890
TauI GCSGC 2 cut(s) 404, 933
TfiI GAWTC 4 cut(s) 353, 922, 952, 964
Tru1I TTAA 6 cut(s) 144, 333, 441, 837, 942, 987
Tru9I TTAA 6 cut(s) 144, 333, 441, 837, 942, 987
TscAI CASTG 2 cut(s) 620, 669
TseFI GTSAC 2 cut(s) 178, 490
TseI GCWGC 1 cut(s) 697
Tsp45I GTSAC 2 cut(s) 178, 490
TspDTI ATGAA 3 cut(s) 282, 552, 646
TspGWI ACGGA 1 cut(s) 330
TspRI CASTG 2 cut(s) 620, 669
Tth111I GACNNNGTC 2 cut(s) 413, 683
VpaK11BI GGWCC 2 cut(s) 667, 679
XagI CCTNNNNNAGG 1 cut(s) 510
XapI RAATTY 2 cut(s) 164, 890
XbaI TCTAGA 1 cut(s) 485
XceI RCATGY 1 cut(s) 123
XmiI GTMKAC 2 cut(s) 687, 741
XspI CTAG 8 cut(s) 126, 392, 405, 452, 486, 533, 549, 991
ZraI GACGTC 1 cut(s) 412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.