Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003739

Physical Location & Seq

Genomic Coordinates Reverse (-)

5114761 .. 5121841

Gene Structure 7081 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G15700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3036 bp

ATGTCCAGTGCTCAAACCCCACTGTTCTTGGCAAATCAGACTAAGGTATTCGATCACTTGATTCCATTGCATAAACCCTTTATTTCTTCTCCAAACCCAGTTTCCCAATCCTTCCCCATGTGGAGAAACATTGCTAAACAAGCAATTTCGAGGTCAGCTGCTAGATTAAACGTCAGTTCCCAAACTCGTGGCCTTCTTGTGTCTTCTCCGGAGTCTATTTTCTCGAAAAATTTGAGCTTTCGGTTTCCGGTCTTGGGATCACCATGTCACGGAAAGGGTTTTCGTTGTTTAAGTGGGATCACGAGGCGAGAGGAGTTTTCCAAGAGCGAGAGGTGCCTTAGTGGGACTTTGGCTAGAGGGTACACGAGTGTAGCCGAAGAGGAGGTCTTATCAACAGATGTTGAGGAAGAGCCTGAGGTAGATGAATTGTTGAAGGAGATGAAGAAAGAGAAGAAGAGAGAAAGTCATCGTTCGTGGCGGATGAAGAAGCAAGACCAATTTGGAATGGGTCGTACCAAGTTCCAGAATTTATGGAGAAGACAAGTTAAGATCGAGACTGAAGAATGGGAAAGAGCTGCTGCAGAGTACATGGAGCTTTTGACAGATATGTGTGAGCAAAAGCTTGCGCCTAATCTGCCTTATGTGAAGTCTTTATTTCTGGGTTGGTTCGAACCATTAAGAGATGCAATTGCTAAAGACCAGGAGTTGTATAGATTAGGGAAGAGCAAAGCAACTTATGCACATTACCTTGATCAGTTGCCTGCCGACAAGATATCTGTTATTACAATGCACAAGTTGATGGGGCATTTGATGACTGGTGGTGATAACGGTTGTGTTAAGGTTGTTCATGCTGCGTGTACAGTAGGCGATGCCATTGAACAAGAGATAAGAATATGCACATTCTTGGATAAGAAGAAAAAAGGGGATGACAATGAGGAGAGTGGGGGAGTTGAAAATGAAACTTCTATGAAGGAACAAGATAAGTTAAGAAAAAAGGTCAATGAGTTGATAAAGAAACAGAAGTTGTCAGCAGTTAGAAAGATCTTGCAGTCACATGACTATACGAAACCATGGATCGCAGATGTTAGGGCTAAGGTTGGAAGTCGTCTAATAGAGTTACTCGTAAGAACAGCTTATATACAGTCTCCAGCTGATCAGCAGGATAATGATCTGCCTGATGTCCGACCTGCATTTGTGCATACCTTCAAGGTAGCGAAAGGAAGCATGAATTCTGGGAGAAAATATGGTGTAATCGAGTGTGACCCTTTGGTCCGCAAAGGCTTGGAAAAAAGTGGGAGATATGCAGTGATGCCATACATGCCAATGCTGGTTCCTCCTCTCAAATGGTCGGGATATGACAAAGGTGCTTACTTGTTCTTGACGTCTTATATAATGAAAACTCATGGAGCCAAGCAACAAAGAGAGGCACTTAAGAGCGCACCTAAAGGACAACTACAACCAGTCTTTGAGGCCCTGGATACGCTTGGAAGTACTAAATGGAGAGTAAATAAGCGAGTCTTAACGGTTGTAGATAGGATATGGAGCAGTGGCGGATGTGTTGCTGATATGGTGGATCGGAGTGATGTTCCTTTACCAGAAAAGCCGGATACTGAAGATGAGGGCATTCTTAAGAAATGGAAGTGGGAAGTCAAATCTGCTAAAAAGGTGAACAGCGAGAGACATTCTCAGCGATGTGACACAGAACTCAAGCTTTCGGTAGCACGGAAAATGAAAGATGAGGAAGCTTTTTACTATCCCCACAATATGGACTTCCGGGGTCGTGCATATCCCATGCCCCCACACTTAAATCATCTTGGCTCTGATTTGTGTCGGGGTGTTTTGGAGTTTGCTGAGGGAAGGCCTATGGGAATTTCAGGCTTACGCTGGCTGAAGATACACTTAGCAAACTTGTATGCTGGTGGTGTAGATAAGTTATCACTTGATGGACGGCTAGCTTTCACTGAAAATCACTTGGATGACATATTTGATTCGGCAGACAGACCACTTGAAGGAAGCAGATGGTGGCTGCAGGCTGAAGACCCATTTCAGTGCTTGGCTGTCTGCATAAGTCTGACTGAAGCTCTGAGAAGCCCATCCCCAGAGACAGTTCTGTCACATATTCCTATACATCAGGATGGTTCCTGCAATGGTTTACAGCATTATGCCGCTCTTGGGAGAGACACATTAGGAGCAGAAGCTGTTAATCTAGTTGCAGGTGAGAAGCCGGCAGATGTTTATTCAGGAATAGCTACCAGGGTTCTTGATATTATGCGCCGAGATGCAGACAGAGATCCTGAAGTTTTTCCAGAGGCATTGCGTGCAAGAAAATTACTTAACCAGGTGGATCGTAAGCTTGTAAAGCAGACGGTTATGACATCAGTCTATGGTGTCACCTACATTGGCGCTCGGGATCAAATAAAGAGAAGGTTGAAGGAACGAAGTGATTTTGGTGATGAAAAAGAAGTTTTTGGGGCTGCTTGCTATGCAGCAAAGGTAACATTAGCTGCTATAGATGAGATGTTTCAAGCTGCACGCGCCATCATGCGTTGGTTTGGTGAATGTGCGAAGATTATTGCTTCAGAAAATGAAACAGTTCGATGGACAACCCCATTGGGTCTTCCTGTTGTACAACCTTACCACCAAATGGGAACAAAACTCGTAAAGACATCCCTCCAGACCCTATCGCTTCAGCATGAAACTGATCAGGTCATTGTGAGGCGACAAAGGACAGCTTTTCCTCCAAATTTTATTCACTCCCTGGATGGGTCTCATATGATGATGACTGCGGTTGCCTGTAAAAGAGCAGGCGTGTGTTTTGCAGGAGTTCATGACTCTTTTTGGACGCATGCGTGTGATGTGGATAAACTAAACATAATACTACGGGAAAAGTTTGTTGAGCTGTATTCACAACCGATACTAGAGAATTTGCTGGAGAGCTTTGAGCAATCGTTTCCTCATTTAGACTTTCCTCCTCTGCCAGAACGAGGAGATTTGGATTTAAAAGTGGTGTTAGATTCACCTTATTTCTTCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0000959 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006351 GO:0006390 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0030880 GO:0032774 GO:0032991 GO:0034062 GO:0034245 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0061695 GO:0071704 GO:0090304 GO:0097659 GO:0097747 GO:0098798 GO:0140053 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNA_pol RPOL_N

Protein Analysis

1011

Amino Acids

114.52

Weight (kDa)

8.69

Isoelectric Point (pI)

52.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPOL_N	PF14700	180 - 497	2.6e-82	DNA-directed RNA polymerase N-terminal
RNA_pol	PF00940	620 - 985	3e-157	DNA-dependent RNA polymerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003739)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15700 AT5G15700
fragaria_vesca	FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120
malus_domestica	MD09G1076800.v1.1 MD15G1148800.v1.1 MD17G1067300.v1.1
prunus_persica	Prupe.3G247300_v2.0.a1 Prupe.3G247300_v2.0.a1 Prupe.3G247300_v2.0.a1 Prupe.3G247300_v2.0.a1
pyrus_communis	pycom09g00400 pycom17g06760
rosa_chinensis	RchiOBHm_Chr2g0164571
rosa_laevigata	RLG00000021466
rosa_multiflora	Rmu_co8270321.1_g000001 Rmu_sc0020353.1_g000005 Rmu_ssc0000076.1_g000002
rosa_roxburghii	Rroxscaffold_2G00086480
rosa_rugosa	Rorug02G0509000 Rorug02G0509100 Rorug02G0509100 Rorug02G0509200.1
rosa_samantha	Rh2AG576800 Rh2BG587900 Rh2CG558700 Rh2DG598500
rosa_wichuraiana	Rw2G047890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2204
AasI	GACNNNNNNGTC	2 cut(s)	1268, 2110
AatII	GACGTC	1 cut(s)	1385
Acc36I	ACCTGC	2 cut(s)	1195, 2204
AccB1I	GGYRCC	1 cut(s)	333
AccB7I	CCANNNNNTGG	2 cut(s)	1765, 2644
AccBSI	CCGCTC	1 cut(s)	2168
AccII	CGCG	1 cut(s)	2535
AccIII	TCCGGA	1 cut(s)	208
AciI	CCGC	5 cut(s)	478, 1273, 1551, 2166, 2786
AclWI	GGATC	7 cut(s)	265, 305, 1082, 1581, 2285, 2352, 2418
AcsI	RAATTY	6 cut(s)	229, 526, 1228, 1869, 2743, 2923
AcuI	CTGAAG	8 cut(s)	579, 1632, 1910, 2055, 2097, 2316, 2562, 2672
AcyI	GRCGYC	1 cut(s)	1382
AfaI	GTAC	6 cut(s)	362, 514, 587, 859, 1492, 2628
AfiI	CCNNNNNNNGG	8 cut(s)	254, 269, 1765, 2009, 2172, 2644, 2763, 2984
AflII	CTTAAG	2 cut(s)	1430, 1628
AgsI	TTSAA	8 cut(s)	433, 878, 953, 1207, 2009, 2431, 2525, 3031
AjnI	CCWGG	5 cut(s)	699, 1473, 2252, 2337, 2757
AjuI	GAANNNNNNNTTGG	2 cut(s)	85, 117
Alw21I	GWGCWC	1 cut(s)	13
Alw26I	GTCTC	6 cut(s)	548, 1149, 1672, 2096, 2172, 2772
AlwI	GGATC	7 cut(s)	265, 305, 1082, 1581, 2285, 2352, 2418
AlwNI	CAGNNNCTG	1 cut(s)	2198
Ama87I	CYCGRG	1 cut(s)	2406
Aor13HI	TCCGGA	1 cut(s)	208
AoxI	GGCC	3 cut(s)	190, 1470, 1859
ApeKI	GCWGC	9 cut(s)	158, 575, 578, 851, 2026, 2474, 2486, 2504, 2528
ApoI	RAATTY	6 cut(s)	229, 526, 1228, 1869, 2743, 2923
ArsI	GACNNNNNNTTYG	2 cut(s)	369, 401
Asp700I	GAANNNNTTC	2 cut(s)	2301, 2592
AspLEI	GCGC	5 cut(s)	628, 1439, 2274, 2405, 2537
AspS9I	GGNCC	2 cut(s)	1270, 1471
AsuC2I	CCSGG	1 cut(s)	1775
AsuHPI	GGTGA	8 cut(s)	252, 833, 1678, 2228, 2383, 2462, 2567, 3009
AsuII	TTCGAA	1 cut(s)	669
AsuNHI	GCTAGC	1 cut(s)	1951
AvaI	CYCGRG	1 cut(s)	2406
AvaII	GGWCC	1 cut(s)	1270
AxyI	CCTNAGG	1 cut(s)	414
BaeI	ACNNNNGTAYC	2 cut(s)	352, 385
BanI	GGYRCC	1 cut(s)	333
BauI	CACGAG	3 cut(s)	186, 301, 364
BbsI	GAAGAC	4 cut(s)	195, 544, 2043, 2609
Bbv12I	GWGCWC	1 cut(s)	13
BbvCI	CCTCAGC	1 cut(s)	1851
BbvI	GCAGC	9 cut(s)	145, 562, 565, 838, 2013, 2461, 2491, 2498, 2515
BccI	CCATC	8 cut(s)	793, 1937, 2013, 2101, 2129, 2546, 2592, 2756
BceAI	ACGGC	1 cut(s)	1964
BciT130I	CCWGG	5 cut(s)	701, 1475, 2254, 2339, 2759
BciVI	GTATCC	2 cut(s)	1471, 1600
BclI	TGATCA	3 cut(s)	751, 1153, 2701
BcnI	CCSGG	1 cut(s)	1775
BcoDI	GTCTC	6 cut(s)	548, 1149, 1672, 2096, 2172, 2772
BfaI	CTAG	5 cut(s)	162, 354, 1952, 2207, 2918
BfmI	CTRYAG	3 cut(s)	579, 2027, 2508
BfoI	RGCGCY	1 cut(s)	2406
BfrI	CTTAAG	2 cut(s)	1430, 1628
BfuAI	ACCTGC	2 cut(s)	1195, 2204
BfuI	GTATCC	2 cut(s)	1471, 1600
BglII	AGATCT	1 cut(s)	1041
BmcAI	AGTACT	1 cut(s)	1492
Bme1390I	CCNGG	6 cut(s)	701, 1475, 1775, 2254, 2339, 2759
Bme18I	GGWCC	1 cut(s)	1270
BmeT110I	CYCGRG	1 cut(s)	2406
BmgT120I	GGNCC	2 cut(s)	1270, 1471
BmiI	GGNNCC	4 cut(s)	335, 1332, 1408, 2140
BmrFI	CCNGG	6 cut(s)	701, 1475, 1775, 2254, 2339, 2759
BmrI	ACTGGG	1 cut(s)	92
BmsI	GCATC	4 cut(s)	673, 859, 1299, 2269
BmtI	GCTAGC	1 cut(s)	1955
BmuI	ACTGGG	1 cut(s)	92
BoxI	GACNNNNGTC	1 cut(s)	2378
BpiI	GAAGAC	4 cut(s)	195, 544, 2043, 2609
BplI	GAGNNNNNCTC	2 cut(s)	1669, 1701
BpmI	CTGGAG	3 cut(s)	1131, 2657, 2951
Bpu10I	CCTNAGC	2 cut(s)	1092, 1851
Bpu14I	TTCGAA	1 cut(s)	669
BpuEI	CTTGAG	1 cut(s)	1691
BpuMI	CCSGG	1 cut(s)	1775
BsaBI	GATNNNNATC	1 cut(s)	1167
BsaHI	GRCGYC	1 cut(s)	1382
BsaI	GGTCTC	1 cut(s)	2772
BsaJI	CCNNGG	5 cut(s)	1070, 1473, 1774, 2253, 2757
BsaWI	WCCGGW	2 cut(s)	208, 247
Bsc4I	CCNNNNNNNGG	8 cut(s)	254, 269, 1765, 2009, 2172, 2644, 2763, 2984
Bse118I	RCCGGY	1 cut(s)	2224
Bse1I	ACTGG	4 cut(s)	6, 98, 820, 1460
Bse21I	CCTNAGG	1 cut(s)	414
Bse3DI	GCAATG	4 cut(s)	65, 129, 2152, 2312
Bse8I	GATNNNNATC	1 cut(s)	1167
BseAI	TCCGGA	1 cut(s)	208
BseBI	CCWGG	5 cut(s)	701, 1475, 2254, 2339, 2759
BseDI	CCNNGG	5 cut(s)	1070, 1473, 1774, 2253, 2757
BseGI	GGATG	8 cut(s)	486, 931, 1559, 1981, 2093, 2140, 2666, 2767
BseJI	GATNNNNATC	1 cut(s)	1167
BseLI	CCNNNNNNNGG	8 cut(s)	254, 269, 1765, 2009, 2172, 2644, 2763, 2984
BseMI	GCAATG	4 cut(s)	65, 129, 2152, 2312
BseMII	CTCAG	4 cut(s)	405, 1700, 1842, 2075
BseNI	ACTGG	4 cut(s)	6, 98, 820, 1460
BseRI	GAGGAG	6 cut(s)	326, 395, 950, 1326, 2961, 3000
BseXI	GCAGC	9 cut(s)	145, 562, 565, 838, 2013, 2461, 2491, 2498, 2515
BsgI	GTGCAG	1 cut(s)	2514
Bsh1236I	CGCG	1 cut(s)	2535
BshFI	GGCC	3 cut(s)	192, 1472, 1861
BshNI	GGYRCC	1 cut(s)	333
BsiHKAI	GWGCWC	1 cut(s)	13
BsiHKCI	CYCGRG	1 cut(s)	2406
BsiSI	CCGG	5 cut(s)	209, 248, 1604, 1774, 2225
BslFI	GGGAC	1 cut(s)	358
BslI	CCNNNNNNNGG	8 cut(s)	254, 269, 1765, 2009, 2172, 2644, 2763, 2984
BsmAI	GTCTC	6 cut(s)	548, 1149, 1672, 2096, 2172, 2772
BsmFI	GGGAC	1 cut(s)	358
BsmI	GAATGC	1 cut(s)	1623
BsnI	GGCC	3 cut(s)	192, 1472, 1861
Bso31I	GGTCTC	1 cut(s)	2772
BsoBI	CYCGRG	1 cut(s)	2406
Bsp119I	TTCGAA	1 cut(s)	669
Bsp1286I	GDGCHC	1 cut(s)	13
Bsp13I	TCCGGA	1 cut(s)	208
Bsp1407I	TGTACA	2 cut(s)	857, 2626
Bsp19I	CCATGG	1 cut(s)	1070
BspACI	CCGC	5 cut(s)	478, 1273, 1551, 2166, 2786
BspANI	GGCC	3 cut(s)	192, 1472, 1861
BspCNI	CTCAG	4 cut(s)	406, 1699, 1843, 2076
BspEI	TCCGGA	1 cut(s)	208
BspFNI	CGCG	1 cut(s)	2535
BspHI	TCATGA	1 cut(s)	2827
BspLI	GGNNCC	4 cut(s)	335, 1332, 1408, 2140
BspMAI	CTGCAG	2 cut(s)	583, 2031
BspMI	ACCTGC	2 cut(s)	1195, 2204
BspOI	GCTAGC	1 cut(s)	1955
BspPI	GGATC	7 cut(s)	265, 305, 1082, 1581, 2285, 2352, 2418
BspQI	GCTCTTC	2 cut(s)	402, 716
BspT104I	TTCGAA	1 cut(s)	669
BspT107I	GGYRCC	1 cut(s)	333
BspTI	CTTAAG	2 cut(s)	1430, 1628
BspTNI	GGTCTC	1 cut(s)	2772
BsrBI	CCGCTC	1 cut(s)	2168
BsrDI	GCAATG	4 cut(s)	65, 129, 2152, 2312
BsrFI	RCCGGY	1 cut(s)	2224
BsrGI	TGTACA	2 cut(s)	857, 2626
BsrI	ACTGG	4 cut(s)	6, 98, 820, 1460
BssAI	RCCGGY	1 cut(s)	2224
BssECI	CCNNGG	5 cut(s)	1070, 1473, 1774, 2253, 2757
BssNI	GRCGYC	1 cut(s)	1382
BssSI	CACGAG	3 cut(s)	186, 301, 364
BssT1I	CCWWGG	1 cut(s)	1070
Bst2BI	CACGAG	3 cut(s)	186, 301, 364
Bst2UI	CCWGG	5 cut(s)	701, 1475, 2254, 2339, 2759
Bst4CI	ACNGT	8 cut(s)	24, 830, 862, 1143, 1525, 2107, 2368, 2593
Bst6I	CTCTTC	4 cut(s)	372, 402, 449, 716
BstACI	GRCGYC	1 cut(s)	1382
BstAFI	CTTAAG	2 cut(s)	1430, 1628
BstAPI	GCANNNNNTGC	2 cut(s)	737, 2318
BstAUI	TGTACA	2 cut(s)	857, 2626
BstBI	TTCGAA	1 cut(s)	669
BstDEI	CTNAG	8 cut(s)	42, 338, 414, 1092, 1686, 1851, 1900, 2084
BstDSI	CCRYGG	1 cut(s)	1070
BstF5I	GGATG	8 cut(s)	486, 931, 1559, 1981, 2093, 2140, 2666, 2767
BstFNI	CGCG	1 cut(s)	2535
BstH2I	RGCGCY	1 cut(s)	2406
BstHHI	GCGC	5 cut(s)	628, 1439, 2274, 2405, 2537
BstMAI	GTCTC	6 cut(s)	548, 1149, 1672, 2096, 2172, 2772
BstMWI	GCNNNNNNNGC	9 cut(s)	140, 333, 634, 737, 1318, 2318, 2359, 2483, 2534
BstNI	CCWGG	5 cut(s)	701, 1475, 2254, 2339, 2759
BstNSI	RCATGY	2 cut(s)	1321, 2849
BstPAI	GACNNNNGTC	1 cut(s)	2378
BstSCI	CCNGG	6 cut(s)	699, 1473, 1773, 2252, 2337, 2757
BstSFI	CTRYAG	3 cut(s)	579, 2027, 2508
BstUI	CGCG	1 cut(s)	2535
BstV1I	GCAGC	9 cut(s)	145, 562, 565, 838, 2013, 2461, 2491, 2498, 2515
BstV2I	GAAGAC	4 cut(s)	195, 544, 2043, 2609
BstX2I	RGATCY	2 cut(s)	1041, 2290
BstXI	CCANNNNNNTGG	1 cut(s)	188
BstYI	RGATCY	2 cut(s)	1041, 2290
Bsu36I	CCTNAGG	1 cut(s)	414
BsuI	GTATCC	2 cut(s)	1471, 1600
BsuRI	GGCC	3 cut(s)	192, 1472, 1861
BtgI	CCRYGG	1 cut(s)	1070
BtgZI	GCGATG	2 cut(s)	882, 1705
BtsCI	GGATG	8 cut(s)	486, 931, 1559, 1981, 2093, 2140, 2666, 2767
BtsI	GCAGTG	2 cut(s)	1311, 1552
BtsIMutI	CAGTG	6 cut(s)	13, 20, 1311, 1552, 1959, 2054
BveI	ACCTGC	2 cut(s)	1195, 2204
CaiI	CAGNNNCTG	1 cut(s)	2198
CciI	TCATGA	1 cut(s)	2827
CfoI	GCGC	5 cut(s)	628, 1439, 2274, 2405, 2537
Cfr10I	RCCGGY	1 cut(s)	2224
Cfr13I	GGNCC	2 cut(s)	1270, 1471
CseI	GACGC	1 cut(s)	2851
CsiI	ACCWGGT	1 cut(s)	2337
Csp6I	GTAC	6 cut(s)	361, 513, 586, 858, 1491, 2627
CspCI	CAANNNNNGTGG	2 cut(s)	9, 44
CviQI	GTAC	6 cut(s)	361, 513, 586, 858, 1491, 2627
DdeI	CTNAG	8 cut(s)	42, 338, 414, 1092, 1686, 1851, 1900, 2084
DraI	TTTAAA	1 cut(s)	3000
DrdI	GACNNNNNNGTC	2 cut(s)	1268, 2110
DseDI	GACNNNNNNGTC	2 cut(s)	1268, 2110
Eam1104I	CTCTTC	4 cut(s)	372, 402, 449, 716
EarI	CTCTTC	4 cut(s)	372, 402, 449, 716
EciI	GGCGGA	2 cut(s)	493, 1566
Eco130I	CCWWGG	1 cut(s)	1070
Eco147I	AGGCCT	1 cut(s)	1861
Eco31I	GGTCTC	1 cut(s)	2772
Eco32I	GATATC	1 cut(s)	774
Eco47I	GGWCC	1 cut(s)	1270
Eco57I	CTGAAG	8 cut(s)	579, 1632, 1910, 2055, 2097, 2316, 2562, 2672
Eco81I	CCTNAGG	1 cut(s)	414
Eco88I	CYCGRG	1 cut(s)	2406
EcoO109I	RGGNCCY	1 cut(s)	1471
EcoRI	GAATTC	1 cut(s)	1228
EcoRII	CCWGG	5 cut(s)	699, 1473, 2252, 2337, 2757
EcoRV	GATATC	1 cut(s)	774
EcoT14I	CCWWGG	1 cut(s)	1070
ErhI	CCWWGG	1 cut(s)	1070
FalI	AAGNNNNNCTT	8 cut(s)	1117, 1149, 1502, 1534, 1883, 1915, 2716, 2748
FaqI	GGGAC	1 cut(s)	358
FauNDI	CATATG	1 cut(s)	2772
FbaI	TGATCA	3 cut(s)	751, 1153, 2701
FokI	GGATG	8 cut(s)	493, 938, 1566, 1988, 2080, 2147, 2653, 2774
FspBI	CTAG	5 cut(s)	162, 354, 1952, 2207, 2918
GlaI	GCGC	5 cut(s)	627, 1438, 2273, 2404, 2536
GsuI	CTGGAG	3 cut(s)	1131, 2657, 2951
HaeII	RGCGCY	1 cut(s)	2406
HaeIII	GGCC	3 cut(s)	192, 1472, 1861
HapII	CCGG	5 cut(s)	209, 248, 1604, 1774, 2225
HgaI	GACGC	1 cut(s)	2851
HhaI	GCGC	5 cut(s)	628, 1439, 2274, 2405, 2537
Hin1I	GRCGYC	1 cut(s)	1382
Hin6I	GCGC	5 cut(s)	626, 1437, 2272, 2403, 2535
HinP1I	GCGC	5 cut(s)	626, 1437, 2272, 2403, 2535
HindIII	AAGCTT	4 cut(s)	620, 1709, 1743, 2351
HinfI	GANTC	6 cut(s)	61, 212, 1515, 1988, 2831, 3014
HpaII	CCGG	5 cut(s)	209, 248, 1604, 1774, 2225
HphI	GGTGA	8 cut(s)	252, 833, 1678, 2228, 2383, 2462, 2567, 3009
Hpy166II	GTNNAC	4 cut(s)	363, 858, 1669, 2153
Hpy188I	TCNGA	7 cut(s)	39, 1184, 1578, 1822, 2073, 2085, 2581
Hpy8I	GTNNAC	4 cut(s)	363, 858, 1669, 2153
HpyAV	CCTTC	9 cut(s)	121, 203, 427, 964, 1213, 1851, 2003, 2418, 2425
HpyCH4III	ACNGT	8 cut(s)	24, 830, 862, 1143, 1525, 2107, 2368, 2593
HpyCH4IV	ACGT	2 cut(s)	171, 1382
HpyF10VI	GCNNNNNNNGC	9 cut(s)	140, 333, 634, 737, 1318, 2318, 2359, 2483, 2534
HpyF3I	CTNAG	8 cut(s)	42, 338, 414, 1092, 1686, 1851, 1900, 2084
HpySE526I	ACGT	2 cut(s)	171, 1382
Hsp92I	GRCGYC	1 cut(s)	1382
HspAI	GCGC	5 cut(s)	626, 1437, 2272, 2403, 2535
Kpn2I	TCCGGA	1 cut(s)	208
KroI	GCCGGC	1 cut(s)	2224
KroNI	GCCGGC	1 cut(s)	2226
Ksp22I	TGATCA	3 cut(s)	751, 1153, 2701
LguI	GCTCTTC	2 cut(s)	402, 716
LmnI	GCTCC	4 cut(s)	592, 1406, 1542, 2189
Lsp1109I	GCAGC	9 cut(s)	145, 562, 565, 838, 2013, 2461, 2491, 2498, 2515
LweI	GCATC	4 cut(s)	673, 859, 1299, 2269
MabI	ACCWGGT	1 cut(s)	2337
MaeI	CTAG	5 cut(s)	162, 354, 1952, 2207, 2918
MaeII	ACGT	2 cut(s)	171, 1382
MaeIII	GTNAC	8 cut(s)	266, 1050, 1116, 1259, 1694, 2112, 2389, 2494
MbiI	CCGCTC	1 cut(s)	2168
MfeI	CAATTG	1 cut(s)	687
MflI	RGATCY	2 cut(s)	1041, 2290
MhlI	GDGCHC	1 cut(s)	13
MlyI	GAGTC	3 cut(s)	221, 1524, 2825
MmeI	TCCRAC	2 cut(s)	1078, 1207
MroI	TCCGGA	1 cut(s)	208
MroNI	GCCGGC	1 cut(s)	2224
MroXI	GAANNNNTTC	2 cut(s)	2301, 2592
MslI	CAYNNNNRTG	5 cut(s)	1322, 1974, 2047, 2133, 2850
MspA1I	CMGCKG	2 cut(s)	158, 1151
MspCI	CTTAAG	2 cut(s)	1430, 1628
MspI	CCGG	5 cut(s)	209, 248, 1604, 1774, 2225
MspR9I	CCNGG	6 cut(s)	701, 1475, 1775, 2254, 2339, 2759
MunI	CAATTG	1 cut(s)	687
Mva1269I	GAATGC	1 cut(s)	1623
MvaI	CCWGG	5 cut(s)	701, 1475, 2254, 2339, 2759
MvnI	CGCG	1 cut(s)	2535
MwoI	GCNNNNNNNGC	9 cut(s)	140, 333, 634, 737, 1318, 2318, 2359, 2483, 2534
NaeI	GCCGGC	1 cut(s)	2226
NciI	CCSGG	1 cut(s)	1775
NcoI	CCATGG	1 cut(s)	1070
NdeI	CATATG	1 cut(s)	2772
NgoMIV	GCCGGC	1 cut(s)	2224
NheI	GCTAGC	1 cut(s)	1951
NlaIV	GGNNCC	4 cut(s)	335, 1332, 1408, 2140
NmeAIII	GCCGAG	1 cut(s)	2300
NmuCI	GTSAC	6 cut(s)	266, 1050, 1259, 1694, 2112, 2389
NspI	RCATGY	2 cut(s)	1321, 2849
NspV	TTCGAA	1 cut(s)	669
PaeI	GCATGC	1 cut(s)	2849
PagI	TCATGA	1 cut(s)	2827
PaqCI	CACCTGC	1 cut(s)	2204
PceI	AGGCCT	1 cut(s)	1861
PciSI	GCTCTTC	2 cut(s)	402, 716
PctI	GAATGC	1 cut(s)	1623
PdiI	GCCGGC	1 cut(s)	2226
PdmI	GAANNNNTTC	2 cut(s)	2301, 2592
PfeI	GAWTC	3 cut(s)	61, 1988, 3014
PflMI	CCANNNNNTGG	2 cut(s)	1765, 2644
PleI	GAGTC	3 cut(s)	220, 1523, 2825
PpsI	GAGTC	3 cut(s)	220, 1523, 2825
PshAI	GACNNNNGTC	1 cut(s)	2378
Psp6I	CCWGG	5 cut(s)	699, 1473, 2252, 2337, 2757
PspGI	CCWGG	5 cut(s)	699, 1473, 2252, 2337, 2757
PspN4I	GGNNCC	4 cut(s)	335, 1332, 1408, 2140
PspPI	GGNCC	2 cut(s)	1270, 1471
PstI	CTGCAG	2 cut(s)	583, 2031
PstNI	CAGNNNCTG	1 cut(s)	2198
PsuI	RGATCY	2 cut(s)	1041, 2290
PvuII	CAGCTG	2 cut(s)	158, 1151
RsaI	GTAC	6 cut(s)	362, 514, 587, 859, 1492, 2628
RsaNI	GTAC	6 cut(s)	361, 513, 586, 858, 1491, 2627
RseI	CAYNNNNRTG	5 cut(s)	1322, 1974, 2047, 2133, 2850
SapI	GCTCTTC	2 cut(s)	402, 716
Sau96I	GGNCC	2 cut(s)	1270, 1471
ScaI	AGTACT	1 cut(s)	1492
SchI	GAGTC	3 cut(s)	221, 1524, 2825
ScrFI	CCNGG	6 cut(s)	701, 1475, 1775, 2254, 2339, 2759
SduI	GDGCHC	1 cut(s)	13
SexAI	ACCWGGT	1 cut(s)	2337
SfaNI	GCATC	4 cut(s)	673, 859, 1299, 2269
SfcI	CTRYAG	3 cut(s)	579, 2027, 2508
SfuI	TTCGAA	1 cut(s)	669
SinI	GGWCC	1 cut(s)	1270
SmiMI	CAYNNNNRTG	5 cut(s)	1322, 1974, 2047, 2133, 2850
SmlI	CTYRAG	3 cut(s)	1430, 1628, 1706
SmoI	CTYRAG	3 cut(s)	1430, 1628, 1706
SphI	GCATGC	1 cut(s)	2849
SseBI	AGGCCT	1 cut(s)	1861
SsiI	CCGC	5 cut(s)	478, 1273, 1551, 2166, 2786
SspMI	CTAG	5 cut(s)	162, 354, 1952, 2207, 2918
StuI	AGGCCT	1 cut(s)	1861
StyD4I	CCNGG	6 cut(s)	699, 1473, 1773, 2252, 2337, 2757
StyI	CCWWGG	1 cut(s)	1070
TaaI	ACNGT	8 cut(s)	24, 830, 862, 1143, 1525, 2107, 2368, 2593
TaiI	ACGT	2 cut(s)	174, 1385
TaqI	TCGA	7 cut(s)	51, 149, 224, 552, 669, 1254, 2596
TatI	WGTACW	4 cut(s)	585, 857, 1490, 2626
TauI	GCSGC	1 cut(s)	2168
TfiI	GAWTC	3 cut(s)	61, 1988, 3014
TscAI	CASTG	6 cut(s)	13, 27, 1311, 1552, 1966, 2054
TseFI	GTSAC	6 cut(s)	266, 1050, 1259, 1694, 2112, 2389
TseI	GCWGC	9 cut(s)	158, 575, 578, 851, 2026, 2474, 2486, 2504, 2528
Tsp45I	GTSAC	6 cut(s)	266, 1050, 1259, 1694, 2112, 2389
TspGWI	ACGGA	2 cut(s)	285, 1738
TspRI	CASTG	6 cut(s)	13, 27, 1311, 1552, 1966, 2054
Van91I	CCANNNNNTGG	2 cut(s)	1765, 2644
Vha464I	CTTAAG	2 cut(s)	1430, 1628
VpaK11BI	GGWCC	1 cut(s)	1270
XapI	RAATTY	6 cut(s)	229, 526, 1228, 1869, 2743, 2923
XceI	RCATGY	2 cut(s)	1321, 2849
XmnI	GAANNNNTTC	2 cut(s)	2301, 2592
XspI	CTAG	5 cut(s)	162, 354, 1952, 2207, 2918
ZraI	GACGTC	1 cut(s)	1383
ZrmI	AGTACT	1 cut(s)	1492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.