Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0003739

Physical Location & Seq

Genomic Coordinates Reverse (-)

35235553 .. 35244373

Gene Structure 8821 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g46120.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3000 bp

ATGTCCATCACCCAAAACCCACCACCATCAAATCTCACCACCAAGCTCTTTGCTTTTGCAAACCCCAGTATCTCCCCCCAAAACCCATCAATGATATCCACCACTGTCTTTAGAAGCCTCACCAAACAAGCCATTTCAAGAACCCAGAGGCTCCCCCTTAAACCCCTTCTTGGGTTTTGCCAAAGATCCGATTTTTTTCAGCACCCCATTTTGGTGAGTTCTTGCTCAACCTTGGTGGGTTCTTGCCAAATTGATCATATGCAGAGACCCAGTTTTGGGTTCAGTGATTTTTGCCCCAAAGGGTATGCAAGTGTGGCTGAGGCCATTTCGTCCACTGATGCATCATCATCTACTGATGCTGAGGAGGAGGTGTGTGTTGTTGATGAGCTTCAGGAAATATTGAAGGAGATGAAGAAAGAGGATAAGAGGCAGTCAGCCTATAGGTGGCGGATTGAGCAAGCTAGGGTGAGAGGAATGGGGGAAGGGAAGTATTTGATGTTGAGGAGGAGGCAGATAAAGATTGAGACCGAAGCGTGGGAGAGGGCGGCAGATGAGTATAGGGAGCTTTTGATGGACATGTGTGAGCAGAAGCTGGCACCCAATTTGCCATATATGAAGTCTTTGTTTCTTGGTTGGTTTGAGCCTTTGTGTAATGCCATTACCAAGGAGCAGGACTTGTGCCGCCAAGGGAAGAATAAGACTGCTTATGGTCCTTATATGGATAAGTTACCAGCGGATATGATGGCGGTTATTACAATGCATAAGTTGATGGGTTTGCTGATGACCGGTGAGCATGGCAGTTGCAGGGTTGTATCGGCTGCTTGCACCATTGGGGAAGCCATAGAGCAGGAGGTTAAGATACACAACTTCTTGGAAAGGACGAAAAAGAAAAAGGTTGGTAAAGATCAGGAAACGGGAGAATCTGATGCTGCAATGAAGGAAAATGAGAAGCTGAATAAAAAGGTCACTAATTTGATGAAAAAAAAAAAACTGCAAGCAGTGAGGCACATAGTGAGGGGACATGATGATTCAAAAGCCTGGAGCCAGGAAGCAAAGGCCAAGGTTGGCAGTCGAATGATTGAATTGCTGACCCAGACAGCTTTTATACAACCTCCTGCTGATCAGTTAGGGGACAGTCTAGTGGATATACGACCTGCATTTGTACACACGTTTAAGACTGTGAGCAATGCAAAGAACACTAGCAGAAGATATGGTGTCATTGAATGCAACCCTCTTGTTCTCAAAGGCCTTGAGAGAACAGCAAGGCACATGGTGATTCCTTATATGCCCATGTTGGTACCCCCACTCAATTGGACAGGTTATGACAAAGGAGGGCACTTTTACTTACCGTCATATGTAATGCGCATTCATGGAGCTAAGCAGCAGCGTGAAGCAGTTAAGAGCACCCCCAGGGAACAACTGGAACCGGTTTTTAAGGCCCTGGACACTCTTGGGAATACCAGATGGAGGATTAATAAGAGGGTATTTAATGTTGTAGACAGAATATGGGCTAATGGAGGTCGTCTGGCTGATTTGGTGGACCGCAGTGATGTTCCTTTACTAGAGAAACCAGATACTGAAGATGAAACATTGCTTAAGAAATGGAAGTGGAAAGTGAACAATGTGAAGAAAGAAAACAGGGAGAGACATTCACAGCGTTGTGACATAGAACTTAAACTTGCTGTAGCACGGAAAATGAAGGATGAAGAAGGATTTTACTTTCCACACAATCTTGACTTTCGGGGCCGTGCGTATCCTATGCACCCATACTTGAACCATCTCGGTTCAGATCTTTGCAGGGGTATTTTAGAGTTTGCTGAGGGACGCCCTCTTGGAAAGTCAGGTTTACGTTGGCTGAAGATACACTTGGCAAATCTATATGCTGGAGGTGTGGACAAATTATCTCTCGAGGGTCGACTAGCATTTACTGAGAATCATTTGGATGATATATTTGATTCCATGGATAGACCACTAGAAGGAAGGCGCTGGTGGTTGAAGGCAGAAGATCCATTTCAGTGCTTGGCTGTTTGCATTAACCTCACTGAAGCTCTAAGAAGCTCTTCTCCAGAAACATTTATCTCACATATTCCTGTACATCAGGATGGCTCTTGCAATGGCTTACAACACTATGCTGCCCTCGGAAGGGACAAGTTAGGAGCAGCTGCTGTCAATCTGGTTGCAGGAGAGAAACCCGCAGATGTTTATTCAGGAATAGCTGCTAGGGTTCTCAATATCATGCAGAGTGATGCACAGAAGGATCCTGAAGTTTTTCCTGATGCATTGCGTGCAAGAGTGTTGGTTAATCAGGTGGATAGGAAGTTGGTAAAGCAAACAGTGATGACATCAGTATATGGTGTCACTTATATTGGTGCTCGGGATCAAATCAAGAGGAGGTTGAAGGAACGTGGTGCCATTTCAGAAGATGATGTCTTTGGTTGTGCTTGTTATGCTGCAAAGGTCACCTTAGCTGCTTTAGGGCAGATGTTTGAAGCTGCTCGAAGTATCATGAGCTGGCTTGGAGATTGCGCAAAAATAATTGCATCCGAAAATGAGACAGTACGATGGACAACTCCACTTGGACTTCCAGTTGTGCAACCTTACCGTAAATACGGAAGGCATCTTATTAAAACTTCCCTTCAAATTTTGACATTACAACGAGAAACAGAAAAGATCATGGTCAAGAGGCAGAGGACAGCTTTCCCACCAAATTTTGTTCATTCCCTCGATGGTTCTCATATGATGATGACTGCGGTTGCCTGCAAAAGGGCAGGCTTAAACTTTGCAGGAGTACATGACTCGTATTGGACACATGCTTGTGATGTGGATGTAATGAACAGGATACTAAGGGAAAAGTTTGTTGAGCTATATGAGACTCCAATACTAGAGAGATTGTTGGAGAGCTTTCAGCAGTCCTTTCCCACATTAACTTTTCCGCCCTTACCTGAGCGGGGTGACTTTGAATTAAGGGACGTTTTAGAATCGCCTTATTTCTTTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0000959 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006351 GO:0006390 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0030880 GO:0032774 GO:0032991 GO:0034062 GO:0034245 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0061695 GO:0071704 GO:0090304 GO:0097659 GO:0097747 GO:0098798 GO:0140053 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNA_pol RPOL_N

Protein Analysis

1000

Amino Acids

113.49

Weight (kDa)

9.02

Isoelectric Point (pI)

50.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPOL_N	PF14700	170 - 486	1.1e-87	DNA-directed RNA polymerase N-terminal
RNA_pol	PF00940	609 - 973	1.4e-160	DNA-dependent RNA polymerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003739)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15700 AT5G15700
fragaria_vesca	FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120
malus_domestica	MD09G1076800.v1.1 MD15G1148800.v1.1 MD17G1067300.v1.1
prunus_persica	Prupe.3G247300_v2.0.a1 Prupe.3G247300_v2.0.a1 Prupe.3G247300_v2.0.a1 Prupe.3G247300_v2.0.a1
pyrus_communis	pycom09g00400 pycom17g06760
rosa_chinensis	RchiOBHm_Chr2g0164571
rosa_laevigata	RLG00000021466
rosa_multiflora	Rmu_co8270321.1_g000001 Rmu_sc0020353.1_g000005 Rmu_ssc0000076.1_g000002
rosa_roxburghii	Rroxscaffold_2G00086480
rosa_rugosa	Rorug02G0509000 Rorug02G0509100 Rorug02G0509100 Rorug02G0509200.1
rosa_samantha	Rh2AG576800 Rh2BG587900 Rh2CG558700 Rh2DG598500
rosa_wichuraiana	Rw2G047890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1364, 2527
Acc36I	ACCTGC	1 cut(s)	1162
Acc65I	GGTACC	1 cut(s)	1297
AccB1I	GGYRCC	3 cut(s)	595, 1297, 2408
AccBSI	CCGCTC	1 cut(s)	2947
AccI	GTMKAC	2 cut(s)	1497, 1915
AclWI	GGATC	5 cut(s)	180, 2000, 2252, 2265, 2385
AcsI	RAATTY	2 cut(s)	2640, 2707
AcuI	CTGAAG	5 cut(s)	374, 1599, 1877, 2064, 2283
AcyI	GRCGYC	1 cut(s)	1825
AdeI	CACNNNGTG	2 cut(s)	1012, 1273
AfaI	GTAC	5 cut(s)	1164, 1299, 2094, 2559, 2790
AflII	CTTAAG	1 cut(s)	1595
AflIII	ACRYGT	2 cut(s)	576, 1167
AgeI	ACCGGT	2 cut(s)	785, 1426
AjnI	CCWGG	4 cut(s)	1037, 1044, 1409, 1440
AjuI	GAANNNNNNNTTGG	2 cut(s)	1850, 1882
Alw21I	GWGCWC	2 cut(s)	1406, 2374
Alw26I	GTCTC	5 cut(s)	259, 518, 1639, 2546, 2864
AlwI	GGATC	5 cut(s)	180, 2000, 2252, 2265, 2385
AlwNI	CAGNNNCTG	3 cut(s)	592, 1577, 2165
Ama87I	CYCGRG	2 cut(s)	1907, 2373
AoxI	GGCC	5 cut(s)	321, 1056, 1246, 1437, 1744
ApoI	RAATTY	2 cut(s)	2640, 2707
AseI	ATTAAT	1 cut(s)	1473
AsiGI	ACCGGT	2 cut(s)	785, 1426
Asp700I	GAANNNNTTC	2 cut(s)	2059, 2268
Asp718I	GGTACC	1 cut(s)	1297
AspLEI	GCGC	3 cut(s)	1365, 1986, 2528
AspS9I	GGNCC	4 cut(s)	710, 1438, 1540, 1744
AsuHPI	GGTGA	8 cut(s)	28, 112, 226, 478, 800, 1285, 2452, 2963
AvaI	CYCGRG	2 cut(s)	1907, 2373
AvaII	GGWCC	2 cut(s)	710, 1540
BaeGI	GKGCMC	1 cut(s)	1338
BaeI	ACNNNNGTAYC	2 cut(s)	52, 85
BamHI	GGATCC	1 cut(s)	2257
BanI	GGYRCC	3 cut(s)	595, 1297, 2408
Bbv12I	GWGCWC	2 cut(s)	1406, 2374
BbvCI	CCTCAGC	3 cut(s)	318, 360, 1818
BceAI	ACGGC	1 cut(s)	1731
BciT130I	CCWGG	4 cut(s)	1039, 1046, 1411, 1442
BciVI	GTATCC	2 cut(s)	1764, 2832
BclI	TGATCA	2 cut(s)	253, 1120
BcoDI	GTCTC	5 cut(s)	259, 518, 1639, 2546, 2864
BfaI	CTAG	8 cut(s)	462, 1139, 1200, 1562, 1919, 1973, 2220, 2882
BfmI	CTRYAG	2 cut(s)	439, 1683
BfoI	RGCGCY	1 cut(s)	1987
BfrI	CTTAAG	1 cut(s)	1595
BfuAI	ACCTGC	1 cut(s)	1162
BfuI	GTATCC	2 cut(s)	1764, 2832
BglII	AGATCT	1 cut(s)	1789
BlpI	GCTNAGC	1 cut(s)	1377
Bme1390I	CCNGG	4 cut(s)	1039, 1046, 1411, 1442
Bme18I	GGWCC	2 cut(s)	710, 1540
BmeT110I	CYCGRG	2 cut(s)	1907, 2373
BmgT120I	GGNCC	4 cut(s)	710, 1438, 1540, 1744
BmiI	GGNNCC	8 cut(s)	152, 597, 1043, 1299, 1425, 1745, 2259, 2410
BmrFI	CCNGG	4 cut(s)	1039, 1046, 1411, 1442
BmrI	ACTGGG	2 cut(s)	60, 264
BmsI	GCATC	8 cut(s)	328, 346, 350, 916, 2236, 2266, 2549, 2626
BmuI	ACTGGG	2 cut(s)	60, 264
BpmI	CTGGAG	3 cut(s)	1060, 1905, 2049
Bpu10I	CCTNAGC	5 cut(s)	318, 360, 1818, 2464, 2943
Bpu1102I	GCTNAGC	1 cut(s)	1377
BpuEI	CTTGAG	1 cut(s)	1271
BsaHI	GRCGYC	1 cut(s)	1825
BsaI	GGTCTC	2 cut(s)	259, 518
BsaJI	CCNNGG	9 cut(s)	231, 663, 685, 1059, 1409, 1410, 1440, 1959, 2137
BsaWI	WCCGGW	2 cut(s)	785, 1426
BsaXI	ACNNNNNCTCC	2 cut(s)	356, 386
Bse118I	RCCGGY	2 cut(s)	785, 1426
Bse1I	ACTGG	4 cut(s)	66, 270, 1425, 2585
Bse3DI	GCAATG	5 cut(s)	939, 1192, 1589, 2119, 2279
BseBI	CCWGG	4 cut(s)	1039, 1046, 1411, 1442
BseDI	CCNNGG	9 cut(s)	231, 663, 685, 1059, 1409, 1410, 1440, 1959, 2137
BseGI	GGATG	5 cut(s)	1708, 1948, 2107, 2540, 2830
BseMI	GCAATG	5 cut(s)	939, 1192, 1589, 2119, 2279
BseMII	CTCAG	5 cut(s)	309, 351, 1809, 1920, 2934
BseNI	ACTGG	4 cut(s)	66, 270, 1425, 2585
BseRI	GAGGAG	5 cut(s)	377, 380, 517, 520, 2404
BseSI	GKGCMC	1 cut(s)	1338
BshFI	GGCC	5 cut(s)	323, 1058, 1248, 1439, 1746
BshNI	GGYRCC	3 cut(s)	595, 1297, 2408
BshTI	ACCGGT	2 cut(s)	785, 1426
BsiHKAI	GWGCWC	2 cut(s)	1406, 2374
BsiHKCI	CYCGRG	2 cut(s)	1907, 2373
BsiSI	CCGG	2 cut(s)	786, 1427
BslFI	GGGAC	5 cut(s)	1032, 1145, 1836, 2159, 2981
BsmAI	GTCTC	5 cut(s)	259, 518, 1639, 2546, 2864
BsmFI	GGGAC	5 cut(s)	1032, 1145, 1836, 2159, 2981
BsmI	GAATGC	2 cut(s)	1229, 1365
BsnI	GGCC	5 cut(s)	323, 1058, 1248, 1439, 1746
Bso31I	GGTCTC	2 cut(s)	259, 518
BsoBI	CYCGRG	2 cut(s)	1907, 2373
Bsp1286I	GDGCHC	3 cut(s)	1338, 1406, 2374
Bsp1407I	TGTACA	2 cut(s)	1162, 2092
Bsp143I	GATC	9 cut(s)	185, 253, 904, 1120, 1789, 2005, 2257, 2377, 2670
Bsp1720I	GCTNAGC	1 cut(s)	1377
Bsp19I	CCATGG	1 cut(s)	1959
BspANI	GGCC	5 cut(s)	323, 1058, 1248, 1439, 1746
BspCNI	CTCAG	5 cut(s)	310, 352, 1810, 1921, 2935
BspHI	TCATGA	1 cut(s)	2505
BspLI	GGNNCC	8 cut(s)	152, 597, 1043, 1299, 1425, 1745, 2259, 2410
BspMI	ACCTGC	1 cut(s)	1162
BspPI	GGATC	5 cut(s)	180, 2000, 2252, 2265, 2385
BspQI	GCTCTTC	1 cut(s)	2065
BspT107I	GGYRCC	3 cut(s)	595, 1297, 2408
BspTI	CTTAAG	1 cut(s)	1595
BspTNI	GGTCTC	2 cut(s)	259, 518
BsrBI	CCGCTC	1 cut(s)	2947
BsrDI	GCAATG	5 cut(s)	939, 1192, 1589, 2119, 2279
BsrFI	RCCGGY	2 cut(s)	785, 1426
BsrGI	TGTACA	2 cut(s)	1162, 2092
BsrI	ACTGG	4 cut(s)	66, 270, 1425, 2585
BssAI	RCCGGY	2 cut(s)	785, 1426
BssECI	CCNNGG	9 cut(s)	231, 663, 685, 1059, 1409, 1410, 1440, 1959, 2137
BssMI	GATC	9 cut(s)	185, 253, 904, 1120, 1789, 2005, 2257, 2377, 2670
BssNI	GRCGYC	1 cut(s)	1825
BssT1I	CCWWGG	5 cut(s)	231, 663, 685, 1059, 1959
Bst2UI	CCWGG	4 cut(s)	1039, 1046, 1411, 1442
Bst4CI	ACNGT	7 cut(s)	106, 1136, 1180, 1350, 2335, 2557, 2603
Bst6I	CTCTTC	1 cut(s)	2065
BstACI	GRCGYC	1 cut(s)	1825
BstAFI	CTTAAG	1 cut(s)	1595
BstAPI	GCANNNNNTGC	1 cut(s)	2285
BstAUI	TGTACA	2 cut(s)	1162, 2092
BstC8I	GCNNGC	8 cut(s)	459, 594, 823, 996, 2286, 2513, 2758, 2770
BstDEI	CTNAG	9 cut(s)	318, 360, 1377, 1818, 1929, 2051, 2464, 2843, 2943
BstDSI	CCRYGG	1 cut(s)	1959
BstEII	GGTNACC	1 cut(s)	2458
BstENI	CCTNNNNNAGG	1 cut(s)	2761
BstF5I	GGATG	5 cut(s)	1708, 1948, 2107, 2540, 2830
BstH2I	RGCGCY	1 cut(s)	1987
BstHHI	GCGC	3 cut(s)	1365, 1986, 2528
BstKTI	GATC	9 cut(s)	188, 256, 907, 1123, 1792, 2008, 2260, 2380, 2673
BstMAI	GTCTC	5 cut(s)	259, 518, 1639, 2546, 2864
BstMBI	GATC	9 cut(s)	185, 253, 904, 1120, 1789, 2005, 2257, 2377, 2670
BstMWI	GCNNNNNNNGC	4 cut(s)	314, 454, 2285, 2447
BstNI	CCWGG	4 cut(s)	1039, 1046, 1411, 1442
BstNSI	RCATGY	2 cut(s)	580, 2813
BstPI	GGTNACC	1 cut(s)	2458
BstSCI	CCNGG	4 cut(s)	1037, 1044, 1409, 1440
BstSFI	CTRYAG	2 cut(s)	439, 1683
BstSLI	GKGCMC	1 cut(s)	1338
BstX2I	RGATCY	4 cut(s)	185, 1789, 2005, 2257
BstXI	CCANNNNNNTGG	1 cut(s)	1311
BstYI	RGATCY	4 cut(s)	185, 1789, 2005, 2257
BsuI	GTATCC	2 cut(s)	1764, 2832
BsuRI	GGCC	5 cut(s)	323, 1058, 1248, 1439, 1746
BtgI	CCRYGG	1 cut(s)	1959
BtsCI	GGATG	5 cut(s)	1708, 1948, 2107, 2540, 2830
BtsI	GCAGTG	2 cut(s)	1005, 1552
BtsIMutI	CAGTG	8 cut(s)	102, 289, 333, 1005, 1552, 2021, 2040, 2340
BveI	ACCTGC	1 cut(s)	1162
Cac8I	GCNNGC	8 cut(s)	459, 594, 823, 996, 2286, 2513, 2758, 2770
CaiI	CAGNNNCTG	3 cut(s)	592, 1577, 2165
CciI	TCATGA	1 cut(s)	2505
CfoI	GCGC	3 cut(s)	1365, 1986, 2528
Cfr10I	RCCGGY	2 cut(s)	785, 1426
Cfr13I	GGNCC	4 cut(s)	710, 1438, 1540, 1744
CseI	GACGC	1 cut(s)	1833
Csp6I	GTAC	5 cut(s)	1163, 1298, 2093, 2558, 2789
CspAI	ACCGGT	2 cut(s)	785, 1426
CspCI	CAANNNNNGTGG	2 cut(s)	216, 251
CviQI	GTAC	5 cut(s)	1163, 1298, 2093, 2558, 2789
DdeI	CTNAG	9 cut(s)	318, 360, 1377, 1818, 1929, 2051, 2464, 2843, 2943
DpnI	GATC	9 cut(s)	187, 255, 906, 1122, 1791, 2007, 2259, 2379, 2672
DpnII	GATC	9 cut(s)	185, 253, 904, 1120, 1789, 2005, 2257, 2377, 2670
DraIII	CACNNNGTG	2 cut(s)	1012, 1273
Eam1104I	CTCTTC	1 cut(s)	2065
EarI	CTCTTC	1 cut(s)	2065
EciI	GGCGGA	2 cut(s)	463, 2922
Eco130I	CCWWGG	5 cut(s)	231, 663, 685, 1059, 1959
Eco147I	AGGCCT	1 cut(s)	1248
Eco31I	GGTCTC	2 cut(s)	259, 518
Eco32I	GATATC	1 cut(s)	96
Eco47I	GGWCC	2 cut(s)	710, 1540
Eco57I	CTGAAG	5 cut(s)	374, 1599, 1877, 2064, 2283
Eco88I	CYCGRG	2 cut(s)	1907, 2373
Eco91I	GGTNACC	1 cut(s)	2458
EcoNI	CCTNNNNNAGG	1 cut(s)	2761
EcoO109I	RGGNCCY	1 cut(s)	1438
EcoO65I	GGTNACC	1 cut(s)	2458
EcoRII	CCWGG	4 cut(s)	1037, 1044, 1409, 1440
EcoRV	GATATC	1 cut(s)	96
EcoT14I	CCWWGG	5 cut(s)	231, 663, 685, 1059, 1959
EcoT22I	ATGCAT	3 cut(s)	343, 762, 2281
ErhI	CCWWGG	5 cut(s)	231, 663, 685, 1059, 1959
FalI	AAGNNNNNCTT	6 cut(s)	1850, 1882, 2044, 2076, 2447, 2479
FaqI	GGGAC	5 cut(s)	1032, 1145, 1836, 2159, 2981
FauI	CCCGC	2 cut(s)	2200, 2940
FauNDI	CATATG	3 cut(s)	258, 1354, 2736
FbaI	TGATCA	2 cut(s)	253, 1120
FblI	GTMKAC	2 cut(s)	1497, 1915
FokI	GGATG	5 cut(s)	1715, 1955, 2114, 2527, 2837
FspAI	RTGCGCAY	1 cut(s)	1364
FspBI	CTAG	8 cut(s)	462, 1139, 1200, 1562, 1919, 1973, 2220, 2882
FspI	TGCGCA	2 cut(s)	1364, 2527
GlaI	GCGC	3 cut(s)	1364, 1985, 2527
GsuI	CTGGAG	3 cut(s)	1060, 1905, 2049
HaeII	RGCGCY	1 cut(s)	1987
HaeIII	GGCC	5 cut(s)	323, 1058, 1248, 1439, 1746
HapII	CCGG	2 cut(s)	786, 1427
HgaI	GACGC	1 cut(s)	1833
HhaI	GCGC	3 cut(s)	1365, 1986, 2528
Hin1I	GRCGYC	1 cut(s)	1825
Hin6I	GCGC	3 cut(s)	1363, 1984, 2526
HinP1I	GCGC	3 cut(s)	1363, 1984, 2526
HincII	GTYRAC	1 cut(s)	1916
HindII	GTYRAC	1 cut(s)	1916
HinfI	GANTC	8 cut(s)	920, 1028, 1276, 1933, 1955, 2795, 2872, 2978
HpaII	CCGG	2 cut(s)	786, 1427
HphI	GGTGA	8 cut(s)	28, 112, 226, 478, 800, 1285, 2452, 2963
Hpy166II	GTNNAC	8 cut(s)	333, 1165, 1498, 1540, 1618, 1847, 1894, 1916
Hpy188I	TCNGA	6 cut(s)	190, 925, 1789, 2141, 2419, 2545
Hpy8I	GTNNAC	8 cut(s)	333, 1165, 1498, 1540, 1618, 1847, 1894, 1916
HpyCH4III	ACNGT	7 cut(s)	106, 1136, 1180, 1350, 2335, 2557, 2603
HpyCH4IV	ACGT	4 cut(s)	1169, 1849, 2404, 2970
HpyF10VI	GCNNNNNNNGC	4 cut(s)	314, 454, 2285, 2447
HpyF3I	CTNAG	9 cut(s)	318, 360, 1377, 1818, 1929, 2051, 2464, 2843, 2943
HpySE526I	ACGT	4 cut(s)	1169, 1849, 2404, 2970
Hsp92I	GRCGYC	1 cut(s)	1825
HspAI	GCGC	3 cut(s)	1363, 1984, 2526
KpnI	GGTACC	1 cut(s)	1301
Ksp22I	TGATCA	2 cut(s)	253, 1120
Kzo9I	GATC	9 cut(s)	185, 253, 904, 1120, 1789, 2005, 2257, 2377, 2670
LguI	GCTCTTC	1 cut(s)	2065
LmnI	GCTCC	6 cut(s)	156, 562, 667, 1041, 1373, 2156
LweI	GCATC	8 cut(s)	328, 346, 350, 916, 2236, 2266, 2549, 2626
MaeI	CTAG	8 cut(s)	462, 1139, 1200, 1562, 1919, 1973, 2220, 2882
MaeII	ACGT	4 cut(s)	1169, 1849, 2404, 2970
MaeIII	GTNAC	6 cut(s)	726, 964, 1661, 2356, 2458, 2951
MalI	GATC	9 cut(s)	187, 255, 906, 1122, 1791, 2007, 2259, 2379, 2672
MbiI	CCGCTC	1 cut(s)	2947
MboI	GATC	9 cut(s)	185, 253, 904, 1120, 1789, 2005, 2257, 2377, 2670
MfeI	CAATTG	1 cut(s)	1309
MflI	RGATCY	4 cut(s)	185, 1789, 2005, 2257
MhlI	GDGCHC	3 cut(s)	1338, 1406, 2374
MlyI	GAGTC	2 cut(s)	2789, 2866
MmeI	TCCRAC	1 cut(s)	2874
Mph1103I	ATGCAT	3 cut(s)	343, 762, 2281
MroXI	GAANNNNTTC	2 cut(s)	2059, 2268
MslI	CAYNNNNRTG	5 cut(s)	212, 1941, 2014, 2100, 2814
MspA1I	CMGCKG	2 cut(s)	734, 2162
MspCI	CTTAAG	1 cut(s)	1595
MspI	CCGG	2 cut(s)	786, 1427
MspR9I	CCNGG	4 cut(s)	1039, 1046, 1411, 1442
MunI	CAATTG	1 cut(s)	1309
Mva1269I	GAATGC	2 cut(s)	1229, 1365
MvaI	CCWGG	4 cut(s)	1039, 1046, 1411, 1442
MwoI	GCNNNNNNNGC	4 cut(s)	314, 454, 2285, 2447
NcoI	CCATGG	1 cut(s)	1959
NdeI	CATATG	3 cut(s)	258, 1354, 2736
NdeII	GATC	9 cut(s)	185, 253, 904, 1120, 1789, 2005, 2257, 2377, 2670
NlaIV	GGNNCC	8 cut(s)	152, 597, 1043, 1299, 1425, 1745, 2259, 2410
NmuCI	GTSAC	5 cut(s)	964, 1661, 2356, 2458, 2951
NsbI	TGCGCA	2 cut(s)	1364, 2527
NsiI	ATGCAT	3 cut(s)	343, 762, 2281
NspI	RCATGY	2 cut(s)	580, 2813
PaeR7I	CTCGAG	1 cut(s)	1907
PagI	TCATGA	1 cut(s)	2505
PasI	CCCWGGG	1 cut(s)	1410
PceI	AGGCCT	1 cut(s)	1248
PciI	ACATGT	1 cut(s)	576
PciSI	GCTCTTC	1 cut(s)	2065
PctI	GAATGC	2 cut(s)	1229, 1365
PdmI	GAANNNNTTC	2 cut(s)	2059, 2268
PfeI	GAWTC	6 cut(s)	920, 1028, 1276, 1933, 1955, 2978
PinAI	ACCGGT	2 cut(s)	785, 1426
PleI	GAGTC	2 cut(s)	2789, 2866
PpsI	GAGTC	2 cut(s)	2789, 2866
PscI	ACATGT	1 cut(s)	576
PshBI	ATTAAT	1 cut(s)	1473
Psp6I	CCWGG	4 cut(s)	1037, 1044, 1409, 1440
PspEI	GGTNACC	1 cut(s)	2458
PspGI	CCWGG	4 cut(s)	1037, 1044, 1409, 1440
PspN4I	GGNNCC	8 cut(s)	152, 597, 1043, 1299, 1425, 1745, 2259, 2410
PspPI	GGNCC	4 cut(s)	710, 1438, 1540, 1744
PstNI	CAGNNNCTG	3 cut(s)	592, 1577, 2165
PsuI	RGATCY	4 cut(s)	185, 1789, 2005, 2257
PvuII	CAGCTG	1 cut(s)	2162
RsaI	GTAC	5 cut(s)	1164, 1299, 2094, 2559, 2790
RsaNI	GTAC	5 cut(s)	1163, 1298, 2093, 2558, 2789
RseI	CAYNNNNRTG	5 cut(s)	212, 1941, 2014, 2100, 2814
SalI	GTCGAC	1 cut(s)	1914
SapI	GCTCTTC	1 cut(s)	2065
Sau3AI	GATC	9 cut(s)	185, 253, 904, 1120, 1789, 2005, 2257, 2377, 2670
Sau96I	GGNCC	4 cut(s)	710, 1438, 1540, 1744
SchI	GAGTC	2 cut(s)	2789, 2866
ScrFI	CCNGG	4 cut(s)	1039, 1046, 1411, 1442
SduI	GDGCHC	3 cut(s)	1338, 1406, 2374
SfaNI	GCATC	8 cut(s)	328, 346, 350, 916, 2236, 2266, 2549, 2626
SfcI	CTRYAG	2 cut(s)	439, 1683
Sfr274I	CTCGAG	1 cut(s)	1907
SinI	GGWCC	2 cut(s)	710, 1540
SlaI	CTCGAG	1 cut(s)	1907
SmiMI	CAYNNNNRTG	5 cut(s)	212, 1941, 2014, 2100, 2814
SmlI	CTYRAG	3 cut(s)	1250, 1595, 1907
SmoI	CTYRAG	3 cut(s)	1250, 1595, 1907
SseBI	AGGCCT	1 cut(s)	1248
SspI	AATATT	1 cut(s)	399
SspMI	CTAG	8 cut(s)	462, 1139, 1200, 1562, 1919, 1973, 2220, 2882
StuI	AGGCCT	1 cut(s)	1248
StyD4I	CCNGG	4 cut(s)	1037, 1044, 1409, 1440
StyI	CCWWGG	5 cut(s)	231, 663, 685, 1059, 1959
TaaI	ACNGT	7 cut(s)	106, 1136, 1180, 1350, 2335, 2557, 2603
TaiI	ACGT	4 cut(s)	1172, 1852, 2407, 2973
TaqI	TCGA	5 cut(s)	1072, 1908, 1915, 2497, 2724
TaqII	GACCGA	1 cut(s)	542
TatI	WGTACW	3 cut(s)	1162, 2092, 2788
TauI	GCSGC	2 cut(s)	548, 684
TfiI	GAWTC	6 cut(s)	920, 1028, 1276, 1933, 1955, 2978
TscAI	CASTG	8 cut(s)	109, 289, 340, 1005, 1552, 2021, 2047, 2340
TseFI	GTSAC	5 cut(s)	964, 1661, 2356, 2458, 2951
Tsp45I	GTSAC	5 cut(s)	964, 1661, 2356, 2458, 2951
TspGWI	ACGGA	2 cut(s)	1705, 2625
TspRI	CASTG	8 cut(s)	109, 289, 340, 1005, 1552, 2021, 2047, 2340
Vha464I	CTTAAG	1 cut(s)	1595
VpaK11BI	GGWCC	2 cut(s)	710, 1540
VspI	ATTAAT	1 cut(s)	1473
XagI	CCTNNNNNAGG	1 cut(s)	2761
XapI	RAATTY	2 cut(s)	2640, 2707
XceI	RCATGY	2 cut(s)	580, 2813
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1417
XhoI	CTCGAG	1 cut(s)	1907
XmiI	GTMKAC	2 cut(s)	1497, 1915
XmnI	GAANNNNTTC	2 cut(s)	2059, 2268
XspI	CTAG	8 cut(s)	462, 1139, 1200, 1562, 1919, 1973, 2220, 2882
Zsp2I	ATGCAT	3 cut(s)	343, 762, 2281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.