Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0003739

Physical Location & Seq

Genomic Coordinates Reverse (-)

75177363 .. 75185991

Gene Structure 8629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G047890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGGATAAGTTACCGGCTGATATGATGTCAGTTATTACAATGCATAAGTTGATGGGGTTGCTGATGACCGGCGAGCATGGTAGTTGCAGGGTTGTATCGGCTGCTTGCACCATTGGTGAAGCCATAGAGCAGGAGGTTAGAATACACAACTTCTTGGAAAGGACAAAAAAGAAAAAGGTTGGTAAAGATCAGGAAACCGGAGAATCTGATGCTATGATGAAGGAAAATGAGAAGCTGAATAAAAAGGTCACAAATTTGATGAAAAAACAAAAAATGCAAGCAGTGAGGCACATAGTGAGGGGACATGATGATTCAAAAGGCTGGAGCCAGGAAGCAAAGGCTAAGGTTGGCAGTCGTTTGATTGAATTGCTGACCCAAACAGCTTTTATACAACCTCCGGCTAATCAGTTAGGGGACGGTCCGCTGGACATACGACCTGCATTTGTGCACACATTTAGGACTGTGAGCAAAGATGCAAAGAACAGTAGCAGAAGATATGGTGTTGTTGAATGTGATCCTCTCGTTCTCAAAGGGCTTGAGAGAACAGCAAGGCACATGGTGATTCCTTATATGCCCATGTTGGTACCCCCACTCAATTGGACAGGTTATGACAAGGGAGGGCACTTTTTCCTACCGTCATATGTCATGCGCATTCATGGAGCTAAACAGCAGCGTGAAGCAGTTAAGAGGACCCCCAGGGAACAACTAGAACCAGTTTTTAAGGCCCTGGACACTCTTGGGAATACCAGATGGAGGGTTAATAAGAGGGTACTTAATGTTGTAGATAGGATATGGGCTAGTGGAGGCCGTCTTGCTGATTTGGTGGACCGCAGTGATGTTCCTTTACCAGAGAAACCAGATACTGAAGATGAAACATTGCTTAAAAAATGGAAGTGGAAAGTGACCTCTGTGAAGAAAGAGAACAGGGAGAGACATGCACAGCGTTGTGACATAGAACTTAAACTTGCTGTAGCACGGAAAATGAAGGATGAAGAAGGATTTTACTTTCCACACAATCTTGACTTCCGGGGCCGTGCATATCCTATGCACCCATACTTGAACCATCTTGGTTCAGATCTTTGCCGGGGTATTTTAGAGTTTGCAGAGGGACGCCCTCTTGGAAAGTCAGGCTTACGTTGGCTGAAGATACACTTGGCAAATCTATATGCTGGTGGTGTGGACAAATTATCTCTGGAGGGTCGACTAGCATTTACTGAGAATCATTTGGATGATATATTTGATTCTGTGGACAGACCACTAGAAGGAAGGCGCTGGTGGTTGAAGGCAGAAGATCCATTTCAGTGCTTGGCTGTGTGCATTAACCTCTCTGAAGCTCTAAGAAGCTCTTCTCCAGAGACATTTATCTCACATATTCCTGTACATCAGGATGGCTCTTGCAATGGCTTACAACACTATGCTGCCCTTGGAAGGGACAAGTTAGGAGCAGGTGCTGTCAATCTGGTTGCAGGAGAGAAACCTGCTGATGTTTACTCAGGAATAGCTGCTAGGGTTCTGGCTATCATGCAGAGTGATGCACAGAAGGATCCTGAAGTTTTTCCTGATGCATTGCGTGCAAGAGTGTTAGTTAATCAGGTGGATAGGAAGTTGGTAAAGCAGACTGTGATGACGTCAGTATATGGTGTCACTTATATTGGTGCTCGGGATCAAATCAAGAGGAGGTTGAAGGAACGTGGTGCCATTTCAGATGATGCAGAGGTCTTTGGTTGTGCTTGTTATGCTGCGAAGGTCACCTTAACTGCTTTGGGGGAGATGTTTGAAGCTGCTCGAAGTATCATGAGCTGGCTTGGAGATTGCGCAAAAATAATTGCATCTGAAAATGAGCCAGTACGGTGGACAACTCCACTTGGGCTTCCAGTTGTGCAACCTTACCGAAAATTTGGAAGGCATCTTATTAAAACTTCCCTTCAAATTTTGACATTACAACGAGAAACAGAAAAGATCATGGTCAAGAGGCAGAGGACAGCTTTCCCACCGAATTTTGTTCATTCCCTCGATGGTTCTCATATGATGATGACTGCAGTTGCCTGTAAAAAGGCAGGCTTAAACTTTGCAGGAGTTCATGACTCGTATTGGACACATGCTTGTGATGTGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0000959 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006351 GO:0006390 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0030880 GO:0032774 GO:0032991 GO:0034062 GO:0034245 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0061695 GO:0071704 GO:0090304 GO:0097659 GO:0097747 GO:0098798 GO:0140053 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNA_pol RPOL_N

Protein Analysis

705

Amino Acids

79.43

Weight (kDa)

9.33

Isoelectric Point (pI)

46.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPOL_N	PF14700	2 - 248	8.2e-64	DNA-directed RNA polymerase N-terminal
RNA_pol	PF00940	371 - 704	1.5e-145	DNA-dependent RNA polymerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003739)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15700 AT5G15700
fragaria_vesca	FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120 FvH4_6g46120
malus_domestica	MD09G1076800.v1.1 MD15G1148800.v1.1 MD17G1067300.v1.1
prunus_persica	Prupe.3G247300_v2.0.a1 Prupe.3G247300_v2.0.a1 Prupe.3G247300_v2.0.a1 Prupe.3G247300_v2.0.a1
pyrus_communis	pycom09g00400 pycom17g06760
rosa_chinensis	RchiOBHm_Chr2g0164571
rosa_laevigata	RLG00000021466
rosa_multiflora	Rmu_co8270321.1_g000001 Rmu_sc0020353.1_g000005 Rmu_ssc0000076.1_g000002
rosa_roxburghii	Rroxscaffold_2G00086480
rosa_rugosa	Rorug02G0509000 Rorug02G0509100 Rorug02G0509100 Rorug02G0509200.1
rosa_samantha	Rh2AG576800 Rh2BG587900 Rh2CG558700 Rh2DG598500
rosa_wichuraiana	Rw2G047890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1436
AatII	GACGTC	1 cut(s)	1631
Acc16I	TGCGCA	2 cut(s)	650, 1816
Acc36I	ACCTGC	3 cut(s)	445, 1436, 1486
Acc65I	GGTACC	1 cut(s)	583
AccB1I	GGYRCC	2 cut(s)	583, 1694
AccI	GTMKAC	1 cut(s)	1201
AciI	CCGC	2 cut(s)	422, 829
AclWI	GGATC	5 cut(s)	509, 1286, 1538, 1551, 1671
AcsI	RAATTY	4 cut(s)	253, 1895, 1929, 1996
AcuI	CTGAAG	4 cut(s)	885, 1163, 1350, 1569
AcyI	GRCGYC	2 cut(s)	1111, 1628
AdeI	CACNNNGTG	2 cut(s)	295, 559
AfaI	GTAC	4 cut(s)	585, 771, 1380, 1848
AfiI	CCNNNNNNNGG	4 cut(s)	753, 1262, 1428, 1429
AgsI	TTSAA	8 cut(s)	315, 365, 509, 1060, 1282, 1684, 1778, 1928
AjnI	CCWGG	3 cut(s)	327, 695, 726
AjuI	GAANNNNNNNTTGG	2 cut(s)	1136, 1168
AluBI	AGCT	9 cut(s)	235, 383, 662, 1334, 1344, 1502, 1781, 1800, 1985
AluI	AGCT	9 cut(s)	235, 383, 662, 1334, 1344, 1502, 1781, 1800, 1985
Alw21I	GWGCWC	2 cut(s)	450, 1660
Alw26I	GTCTC	2 cut(s)	925, 1349
Alw44I	GTGCAC	1 cut(s)	446
AlwI	GGATC	5 cut(s)	509, 1286, 1538, 1551, 1671
AlwNI	CAGNNNCTG	2 cut(s)	863, 1451
Ama87I	CYCGRG	1 cut(s)	1659
AoxI	GGCC	3 cut(s)	723, 805, 1030
ApaLI	GTGCAC	1 cut(s)	446
ApeKI	GCWGC	6 cut(s)	101, 670, 1418, 1502, 1739, 1781
ApoI	RAATTY	4 cut(s)	253, 1895, 1929, 1996
Asp700I	GAANNNNTTC	2 cut(s)	1345, 1554
Asp718I	GGTACC	1 cut(s)	583
AspLEI	GCGC	3 cut(s)	651, 1272, 1817
AspS9I	GGNCC	5 cut(s)	419, 690, 724, 826, 1030
AsuC2I	CCSGG	2 cut(s)	1028, 1085
AsuHPI	GGTGA	3 cut(s)	128, 571, 1741
AvaI	CYCGRG	1 cut(s)	1659
AvaII	GGWCC	3 cut(s)	419, 690, 826
BaeGI	GKGCMC	2 cut(s)	450, 624
BamHI	GGATCC	1 cut(s)	1543
BanI	GGYRCC	2 cut(s)	583, 1694
Bbv12I	GWGCWC	2 cut(s)	450, 1660
BbvI	GCAGC	6 cut(s)	88, 682, 1405, 1489, 1726, 1768
BccI	CCATC	5 cut(s)	46, 744, 1071, 1382, 2009
BceAI	ACGGC	2 cut(s)	792, 1017
BciT130I	CCWGG	3 cut(s)	329, 697, 728
BcnI	CCSGG	2 cut(s)	1028, 1085
BcoDI	GTCTC	2 cut(s)	925, 1349
BfaI	CTAG	5 cut(s)	707, 798, 1205, 1259, 1506
BfmI	CTRYAG	2 cut(s)	969, 2037
BfoI	RGCGCY	1 cut(s)	1273
BfuAI	ACCTGC	3 cut(s)	445, 1436, 1486
BglII	AGATCT	1 cut(s)	1075
BisI	GCNGC	6 cut(s)	102, 671, 1419, 1503, 1740, 1782
BlsI	GCNGC	6 cut(s)	103, 672, 1420, 1504, 1741, 1783
Bme1390I	CCNGG	5 cut(s)	329, 697, 728, 1028, 1085
Bme18I	GGWCC	3 cut(s)	419, 690, 826
BmeT110I	CYCGRG	1 cut(s)	1659
BmgT120I	GGNCC	5 cut(s)	419, 690, 724, 826, 1030
BmiI	GGNNCC	6 cut(s)	326, 585, 692, 1031, 1545, 1696
BmrFI	CCNGG	5 cut(s)	329, 697, 728, 1028, 1085
BmsI	GCATC	7 cut(s)	199, 463, 1522, 1552, 1699, 1838, 1915
BpmI	CTGGAG	3 cut(s)	343, 1214, 1335
Bpu10I	CCTNAGC	1 cut(s)	342
BpuEI	CTTGAG	1 cut(s)	557
BpuMI	CCSGG	2 cut(s)	1028, 1085
BsaHI	GRCGYC	2 cut(s)	1111, 1628
BsaJI	CCNNGG	6 cut(s)	695, 696, 726, 1027, 1084, 1423
BsaWI	WCCGGW	1 cut(s)	197
Bsc4I	CCNNNNNNNGG	4 cut(s)	753, 1262, 1428, 1429
Bse118I	RCCGGY	2 cut(s)	13, 68
Bse1I	ACTGG	3 cut(s)	713, 1844, 1874
Bse3DI	GCAATG	3 cut(s)	875, 1405, 1565
BseBI	CCWGG	3 cut(s)	329, 697, 728
BseDI	CCNNGG	6 cut(s)	695, 696, 726, 1027, 1084, 1423
BseGI	GGATG	3 cut(s)	994, 1234, 1393
BseLI	CCNNNNNNNGG	4 cut(s)	753, 1262, 1428, 1429
BseMI	GCAATG	3 cut(s)	875, 1405, 1565
BseMII	CTCAG	2 cut(s)	1206, 1506
BseNI	ACTGG	3 cut(s)	713, 1844, 1874
BseRI	GAGGAG	1 cut(s)	1690
BseSI	GKGCMC	2 cut(s)	450, 624
BseXI	GCAGC	6 cut(s)	88, 682, 1405, 1489, 1726, 1768
BshFI	GGCC	3 cut(s)	725, 807, 1032
BshNI	GGYRCC	2 cut(s)	583, 1694
BsiHKAI	GWGCWC	2 cut(s)	450, 1660
BsiHKCI	CYCGRG	1 cut(s)	1659
BsiSI	CCGG	6 cut(s)	14, 69, 198, 398, 1027, 1084
BslFI	GGGAC	4 cut(s)	315, 428, 1122, 1445
BslI	CCNNNNNNNGG	4 cut(s)	753, 1262, 1428, 1429
BsmAI	GTCTC	2 cut(s)	925, 1349
BsmFI	GGGAC	4 cut(s)	315, 428, 1122, 1445
BsmI	GAATGC	1 cut(s)	651
BsnI	GGCC	3 cut(s)	725, 807, 1032
BsoBI	CYCGRG	1 cut(s)	1659
Bsp1286I	GDGCHC	3 cut(s)	450, 624, 1660
Bsp1407I	TGTACA	1 cut(s)	1378
Bsp143I	GATC	7 cut(s)	187, 514, 1075, 1291, 1543, 1663, 1959
BspACI	CCGC	2 cut(s)	422, 829
BspANI	GGCC	3 cut(s)	725, 807, 1032
BspCNI	CTCAG	2 cut(s)	1207, 1505
BspHI	TCATGA	2 cut(s)	1794, 2080
BspLI	GGNNCC	6 cut(s)	326, 585, 692, 1031, 1545, 1696
BspMAI	CTGCAG	1 cut(s)	2041
BspMI	ACCTGC	3 cut(s)	445, 1436, 1486
BspPI	GGATC	5 cut(s)	509, 1286, 1538, 1551, 1671
BspQI	GCTCTTC	1 cut(s)	1351
BspT107I	GGYRCC	2 cut(s)	583, 1694
BsrDI	GCAATG	3 cut(s)	875, 1405, 1565
BsrFI	RCCGGY	2 cut(s)	13, 68
BsrGI	TGTACA	1 cut(s)	1378
BsrI	ACTGG	3 cut(s)	713, 1844, 1874
BssAI	RCCGGY	2 cut(s)	13, 68
BssECI	CCNNGG	6 cut(s)	695, 696, 726, 1027, 1084, 1423
BssMI	GATC	7 cut(s)	187, 514, 1075, 1291, 1543, 1663, 1959
BssNI	GRCGYC	2 cut(s)	1111, 1628
BssT1I	CCWWGG	1 cut(s)	1423
Bst2UI	CCWGG	3 cut(s)	329, 697, 728
Bst4CI	ACNGT	6 cut(s)	419, 463, 485, 636, 1621, 1851
Bst6I	CTCTTC	1 cut(s)	1351
BstACI	GRCGYC	2 cut(s)	1111, 1628
BstAPI	GCANNNNNTGC	1 cut(s)	1571
BstAUI	TGTACA	1 cut(s)	1378
BstC8I	GCNNGC	6 cut(s)	74, 106, 279, 1572, 1802, 2059
BstDEI	CTNAG	4 cut(s)	342, 1215, 1337, 1492
BstEII	GGTNACC	1 cut(s)	1747
BstF5I	GGATG	3 cut(s)	994, 1234, 1393
BstH2I	RGCGCY	1 cut(s)	1273
BstHHI	GCGC	3 cut(s)	651, 1272, 1817
BstKTI	GATC	7 cut(s)	190, 517, 1078, 1294, 1546, 1666, 1962
BstMAI	GTCTC	2 cut(s)	925, 1349
BstMBI	GATC	7 cut(s)	187, 514, 1075, 1291, 1543, 1663, 1959
BstMWI	GCNNNNNNNGC	2 cut(s)	1571, 1736
BstNI	CCWGG	3 cut(s)	329, 697, 728
BstNSI	RCATGY	2 cut(s)	938, 2102
BstPI	GGTNACC	1 cut(s)	1747
BstSCI	CCNGG	5 cut(s)	327, 695, 726, 1026, 1083
BstSFI	CTRYAG	2 cut(s)	969, 2037
BstSLI	GKGCMC	2 cut(s)	450, 624
BstV1I	GCAGC	6 cut(s)	88, 682, 1405, 1489, 1726, 1768
BstX2I	RGATCY	3 cut(s)	1075, 1291, 1543
BstXI	CCANNNNNNTGG	2 cut(s)	597, 1851
BstYI	RGATCY	3 cut(s)	1075, 1291, 1543
BsuRI	GGCC	3 cut(s)	725, 807, 1032
BtsCI	GGATG	3 cut(s)	994, 1234, 1393
BtsI	GCAGTG	2 cut(s)	288, 838
BtsIMutI	CAGTG	3 cut(s)	288, 838, 1307
BveI	ACCTGC	3 cut(s)	445, 1436, 1486
Cac8I	GCNNGC	6 cut(s)	74, 106, 279, 1572, 1802, 2059
CaiI	CAGNNNCTG	2 cut(s)	863, 1451
CciI	TCATGA	2 cut(s)	1794, 2080
CfoI	GCGC	3 cut(s)	651, 1272, 1817
Cfr10I	RCCGGY	2 cut(s)	13, 68
Cfr13I	GGNCC	5 cut(s)	419, 690, 724, 826, 1030
CpoI	CGGWCCG	1 cut(s)	419
CseI	GACGC	1 cut(s)	1119
Csp6I	GTAC	4 cut(s)	584, 770, 1379, 1847
CspI	CGGWCCG	1 cut(s)	419
CviQI	GTAC	4 cut(s)	584, 770, 1379, 1847
DdeI	CTNAG	4 cut(s)	342, 1215, 1337, 1492
DpnI	GATC	7 cut(s)	189, 516, 1077, 1293, 1545, 1665, 1961
DpnII	GATC	7 cut(s)	187, 514, 1075, 1291, 1543, 1663, 1959
DraIII	CACNNNGTG	2 cut(s)	295, 559
Eam1104I	CTCTTC	1 cut(s)	1351
EarI	CTCTTC	1 cut(s)	1351
Eco130I	CCWWGG	1 cut(s)	1423
Eco47I	GGWCC	3 cut(s)	419, 690, 826
Eco57I	CTGAAG	4 cut(s)	885, 1163, 1350, 1569
Eco88I	CYCGRG	1 cut(s)	1659
Eco91I	GGTNACC	1 cut(s)	1747
EcoO109I	RGGNCCY	2 cut(s)	690, 724
EcoO65I	GGTNACC	1 cut(s)	1747
EcoRII	CCWGG	3 cut(s)	327, 695, 726
EcoT14I	CCWWGG	1 cut(s)	1423
EcoT22I	ATGCAT	2 cut(s)	45, 1567
ErhI	CCWWGG	1 cut(s)	1423
FaqI	GGGAC	4 cut(s)	315, 428, 1122, 1445
FauNDI	CATATG	2 cut(s)	640, 2025
FblI	GTMKAC	1 cut(s)	1201
Fnu4HI	GCNGC	6 cut(s)	102, 671, 1419, 1503, 1740, 1782
FokI	GGATG	3 cut(s)	1001, 1241, 1400
Fsp4HI	GCNGC	6 cut(s)	102, 671, 1419, 1503, 1740, 1782
FspAI	RTGCGCAY	1 cut(s)	650
FspBI	CTAG	5 cut(s)	707, 798, 1205, 1259, 1506
FspI	TGCGCA	2 cut(s)	650, 1816
GlaI	GCGC	3 cut(s)	650, 1271, 1816
GluI	GCNGC	6 cut(s)	102, 671, 1419, 1503, 1740, 1782
GsuI	CTGGAG	3 cut(s)	343, 1214, 1335
HaeII	RGCGCY	1 cut(s)	1273
HaeIII	GGCC	3 cut(s)	725, 807, 1032
HapII	CCGG	6 cut(s)	14, 69, 198, 398, 1027, 1084
HgaI	GACGC	1 cut(s)	1119
HhaI	GCGC	3 cut(s)	651, 1272, 1817
Hin1I	GRCGYC	2 cut(s)	1111, 1628
Hin6I	GCGC	3 cut(s)	649, 1270, 1815
HinP1I	GCGC	3 cut(s)	649, 1270, 1815
HincII	GTYRAC	1 cut(s)	1202
HindII	GTYRAC	1 cut(s)	1202
HinfI	GANTC	6 cut(s)	203, 311, 562, 1219, 1241, 2084
HpaII	CCGG	6 cut(s)	14, 69, 198, 398, 1027, 1084
HphI	GGTGA	3 cut(s)	128, 571, 1741
Hpy166II	GTNNAC	7 cut(s)	448, 826, 1180, 1202, 1249, 1489, 1854
Hpy188I	TCNGA	5 cut(s)	208, 1075, 1330, 1705, 1834
Hpy8I	GTNNAC	7 cut(s)	448, 826, 1180, 1202, 1249, 1489, 1854
HpyCH4III	ACNGT	6 cut(s)	419, 463, 485, 636, 1621, 1851
HpyCH4IV	ACGT	3 cut(s)	1135, 1628, 1690
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1571, 1736
HpyF3I	CTNAG	4 cut(s)	342, 1215, 1337, 1492
HpySE526I	ACGT	3 cut(s)	1135, 1628, 1690
Hsp92I	GRCGYC	2 cut(s)	1111, 1628
HspAI	GCGC	3 cut(s)	649, 1270, 1815
KpnI	GGTACC	1 cut(s)	587
Kzo9I	GATC	7 cut(s)	187, 514, 1075, 1291, 1543, 1663, 1959
LguI	GCTCTTC	1 cut(s)	1351
LmnI	GCTCC	3 cut(s)	324, 659, 1442
Lsp1109I	GCAGC	6 cut(s)	88, 682, 1405, 1489, 1726, 1768
LweI	GCATC	7 cut(s)	199, 463, 1522, 1552, 1699, 1838, 1915
MaeI	CTAG	5 cut(s)	707, 798, 1205, 1259, 1506
MaeII	ACGT	3 cut(s)	1135, 1628, 1690
MaeIII	GTNAC	6 cut(s)	9, 247, 901, 947, 1642, 1747
MalI	GATC	7 cut(s)	189, 516, 1077, 1293, 1545, 1665, 1961
MboI	GATC	7 cut(s)	187, 514, 1075, 1291, 1543, 1663, 1959
MboII	GAAGA	7 cut(s)	504, 878, 925, 1004, 1156, 1301, 1338
MfeI	CAATTG	1 cut(s)	595
MflI	RGATCY	3 cut(s)	1075, 1291, 1543
MhlI	GDGCHC	3 cut(s)	450, 624, 1660
MluCI	AATT	8 cut(s)	253, 365, 595, 1184, 1824, 1895, 1929, 1996
MlyI	GAGTC	1 cut(s)	2078
Mph1103I	ATGCAT	2 cut(s)	45, 1567
MroXI	GAANNNNTTC	2 cut(s)	1345, 1554
MslI	CAYNNNNRTG	4 cut(s)	1227, 1300, 1386, 2103
MspA1I	CMGCKG	1 cut(s)	424
MspI	CCGG	6 cut(s)	14, 69, 198, 398, 1027, 1084
MspR9I	CCNGG	5 cut(s)	329, 697, 728, 1028, 1085
MunI	CAATTG	1 cut(s)	595
Mva1269I	GAATGC	1 cut(s)	651
MvaI	CCWGG	3 cut(s)	329, 697, 728
MwoI	GCNNNNNNNGC	2 cut(s)	1571, 1736
NciI	CCSGG	2 cut(s)	1028, 1085
NdeI	CATATG	2 cut(s)	640, 2025
NdeII	GATC	7 cut(s)	187, 514, 1075, 1291, 1543, 1663, 1959
NlaIV	GGNNCC	6 cut(s)	326, 585, 692, 1031, 1545, 1696
NmuCI	GTSAC	5 cut(s)	247, 901, 947, 1642, 1747
NsbI	TGCGCA	2 cut(s)	650, 1816
NsiI	ATGCAT	2 cut(s)	45, 1567
NspI	RCATGY	2 cut(s)	938, 2102
PagI	TCATGA	2 cut(s)	1794, 2080
PaqCI	CACCTGC	1 cut(s)	1436
PasI	CCCWGGG	1 cut(s)	696
PciSI	GCTCTTC	1 cut(s)	1351
PctI	GAATGC	1 cut(s)	651
PdmI	GAANNNNTTC	2 cut(s)	1345, 1554
PfeI	GAWTC	5 cut(s)	203, 311, 562, 1219, 1241
PkrI	GCNGC	6 cut(s)	103, 672, 1420, 1504, 1741, 1783
PleI	GAGTC	1 cut(s)	2078
PpsI	GAGTC	1 cut(s)	2078
PpuMI	RGGWCCY	1 cut(s)	690
Psp5II	RGGWCCY	1 cut(s)	690
Psp6I	CCWGG	3 cut(s)	327, 695, 726
PspEI	GGTNACC	1 cut(s)	1747
PspGI	CCWGG	3 cut(s)	327, 695, 726
PspN4I	GGNNCC	6 cut(s)	326, 585, 692, 1031, 1545, 1696
PspPI	GGNCC	5 cut(s)	419, 690, 724, 826, 1030
PspPPI	RGGWCCY	1 cut(s)	690
PstI	CTGCAG	1 cut(s)	2041
PstNI	CAGNNNCTG	2 cut(s)	863, 1451
PsuI	RGATCY	3 cut(s)	1075, 1291, 1543
RsaI	GTAC	4 cut(s)	585, 771, 1380, 1848
RsaNI	GTAC	4 cut(s)	584, 770, 1379, 1847
RseI	CAYNNNNRTG	4 cut(s)	1227, 1300, 1386, 2103
Rsr2I	CGGWCCG	1 cut(s)	419
RsrII	CGGWCCG	1 cut(s)	419
SalI	GTCGAC	1 cut(s)	1200
SapI	GCTCTTC	1 cut(s)	1351
SatI	GCNGC	6 cut(s)	102, 671, 1419, 1503, 1740, 1782
Sau3AI	GATC	7 cut(s)	187, 514, 1075, 1291, 1543, 1663, 1959
Sau96I	GGNCC	5 cut(s)	419, 690, 724, 826, 1030
SchI	GAGTC	1 cut(s)	2078
ScrFI	CCNGG	5 cut(s)	329, 697, 728, 1028, 1085
SduI	GDGCHC	3 cut(s)	450, 624, 1660
SfaNI	GCATC	7 cut(s)	199, 463, 1522, 1552, 1699, 1838, 1915
SfcI	CTRYAG	2 cut(s)	969, 2037
SinI	GGWCC	3 cut(s)	419, 690, 826
SmiMI	CAYNNNNRTG	4 cut(s)	1227, 1300, 1386, 2103
SmlI	CTYRAG	1 cut(s)	536
SmoI	CTYRAG	1 cut(s)	536
Sse9I	AATT	8 cut(s)	253, 365, 595, 1184, 1824, 1895, 1929, 1996
SsiI	CCGC	2 cut(s)	422, 829
SspMI	CTAG	5 cut(s)	707, 798, 1205, 1259, 1506
StyD4I	CCNGG	5 cut(s)	327, 695, 726, 1026, 1083
StyI	CCWWGG	1 cut(s)	1423
TaaI	ACNGT	6 cut(s)	419, 463, 485, 636, 1621, 1851
TaiI	ACGT	3 cut(s)	1138, 1631, 1693
TaqI	TCGA	3 cut(s)	1201, 1786, 2013
TasI	AATT	8 cut(s)	253, 365, 595, 1184, 1824, 1895, 1929, 1996
TatI	WGTACW	1 cut(s)	1378
TfiI	GAWTC	5 cut(s)	203, 311, 562, 1219, 1241
TscAI	CASTG	3 cut(s)	288, 838, 1307
TseFI	GTSAC	5 cut(s)	247, 901, 947, 1642, 1747
TseI	GCWGC	6 cut(s)	101, 670, 1418, 1502, 1739, 1781
Tsp45I	GTSAC	5 cut(s)	247, 901, 947, 1642, 1747
TspDTI	ATGAA	8 cut(s)	233, 275, 644, 885, 998, 1005, 1994, 2069
TspGWI	ACGGA	1 cut(s)	991
TspRI	CASTG	3 cut(s)	288, 838, 1307
VneI	GTGCAC	1 cut(s)	446
VpaK11BI	GGWCC	3 cut(s)	419, 690, 826
XapI	RAATTY	4 cut(s)	253, 1895, 1929, 1996
XceI	RCATGY	2 cut(s)	938, 2102
XmiI	GTMKAC	1 cut(s)	1201
XmnI	GAANNNNTTC	2 cut(s)	1345, 1554
XspI	CTAG	5 cut(s)	707, 798, 1205, 1259, 1506
ZraI	GACGTC	1 cut(s)	1629
Zsp2I	ATGCAT	2 cut(s)	45, 1567

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.