Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003031

Physical Location & Seq

Genomic Coordinates Forward (+)

7785743 .. 7792991

Gene Structure 7249 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G23150.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4179 bp

ATGGCTCCTGGGCGTAAAAGAGGAGCGAGCAAGGCCAAAGCCAAAGGGCAGTTGGTTCTCGGTGATCTGGTTCTCGCCAAAGTCAAAGGCTTCCCTGCTTGGCCTGCCAAGATCAGCCGGCCTGAAGATTGGGATCGTGCGCCAGACCCAAAGAAGTACTTTGTTCAGTTCTTTGGAACAGAGGAAATAGCTTTTGTTGCGCCACCTGATATCCAAGCCTTCACTAGTGAGGCAAAGAGCAAACTATTAGCAAGATGTCAAGGTAAAACTGTCAAGTACTTTGCACAAGCTGTAGAGCAAATCTGCACTGCATTTGAAGGGTTGCAGAATCACAAGTCAAATGCTTTGGGCGATGAGGATTCTCTGGATGCTACTGAACCTGGTTTGACAAAGGCTGAGATAGTGGATGGAACAGATCATATTGTCATTGAGTCTGAGAGAACTGATAACTTTAATTTTAGGGTGGATCCTTGCTTCCCCAAATTAGATGAGAATAATGGTGAGGAGAGAAAGGCTGAGATAAGGAAGCTAGATTCATCTTCATTTCTGGAATCAAAGGTCAAAACCACATCCCCTGTTAGCGAGTCACTGGAGCATAGTTCATTTGACCCTAAAATAAAGAAAGAAGATTTTGATAAAGGAACTGACGGTAGTGCTTGCAATGAACATTTTGGTAATGGCCAAAAGAAGCTGGCTAACGGTAAGAGAATTAAGAAGGAAGCAGGTGGCTCTGATAGAAAAGGTGAAGATACAGTTCATCGAGACAAAAGCAATAACTCACATGTGCCTGGTGGTCGAACTGCCAGTGGTAACTCTGATTCCAAAAAATCGAAAGGTCTGTTGACAGAGAAAACCAGCTCCAAAGTGTCTGCTGATAAGCATGAAAATTCACCTGGCATCAAGGTTGGGGTTTCCGGAAAGAAAAGGAGGCTTGAAAGTGAACAAGGTAAGCTTGCACCAAGAGTAGATGAAAGCTCACGTGCTGCTAAAAAGCCGCGATGTGAAAGTGCAGACAATAAAGTAAAGTGTGAAATTGATGATGGATCTGATTCTACTGGGACTGTATCAGATATTAAGCGTGAAATTGTTTTAGGATTAGGTGCTCGCGGTGGAAATTTTCAATATGATAAAGAAGCAGTTGCATATACAAAGCGCCAGAGACAGACAATGGAGCATGCTACCTCTCCTTCTTTTTCTGGGTCTCGTGATAAATCTGGGAAAGGTCATCTGGAACAGAAAGACCGTTCCTCTCCTGTTCGTAATGTTAAGGCTCCAGCTGCACAGTCGCTGAAAAAACGGAGGGCTGTTTGTATCTACGACGAAGATGATGATGAAGATCCAAAAACCCCATTACATGGAAAACCAGCCATTGTTCCCCAAGCAGCATCTGTTTTGACTGATGGTCCTAAAAGGGCTAATGTGTGTCACAGTACTTCTACAAAAGCTAAGATATCTGCTGGATCTACAGAGAGTACTGAAGTAAGAAAGTTCCCTCTGCGTAAACATTGTGAGGATGCATCACGTGTATTACCAAGCAATGCGGAGAATTCTACTAATAGCTTACCTGTGGTAAAACCCATTAATGAATTGCCGCCAAAGGATGTCAAACAGATCTTGCAATCTCCGAAGATGTCCCCTCAGCTGGTTTTAACTAACAAGCACGTTGCAGGACAGCATAAAGTTGTAAAATCATCGGTGAAAGTTTCTGGTGTTGTGATGGCAAAGAAGCCTCAAAGTGATTCTTGTAAGGAGGCGGTTGCGGGATCTGACAAAATAAGCTCTTCTCAGTCTCAGCCAGCAAATCAGAGACACAAATCAGCTTCAGTTGGAGAGAGGCTAACAGTGGTTTCAAAAGCTGCATCACGTTTGAATGACTCTGGTTCAAGAGACATGTCTGAGGACTTGTCTGCTGCTATGCTTGACCTCAATAGAGAAAAGGGGAGTGCTACATTTACCAGTGCAAAGACCCCAGATTCGGCTGCATCTATGAAGGATCTAATTGCTGCTGCGCAGGCAAAAAGAAAACTTGCACATACACAAAATTCAATTTTTGGGAATTTGAACCCTAGTTTCTTGAGCATCAGTGATACACAGGGGAGGAGCCATAGCCCATTTATGGTTCAGAATGCTTCAGCTTCTGCTGCCATCTCAATGCCGTTAGTTGTTCAAGGTCATCATCAACAAGGTTCTTCTCCGTCAAATCATGGGCATCAGTCCTTATCAAGAAATCAGATTGAGACTGATGATAATGAAGAGAGAAGACTTAGTTCAGGGCATAAGTCAGTTGGAGGTTCACTTAGTTGTAGCACTGAGGCTGCTATTTCTCGGGATGCTTTTGAAGGCATGTTAGAGACCTTATCAAGAACCAGGGAAAGTATTGGACGTGCAACTCGCCTAGCAATTGATTGTGCCAAGTATGGGCTTGCTAGTGAGGTGGTGGAACTTCTCATACGAAAGTTGGAAAGTGAATCTCACTTCCATCGTAAAGTGGACTTGTTCTTTCTCGTCGACTCTATCACCCAGCATTCGCACAGCCAAAAAGGTATTGCTGGTGCTTCTTACGTTCCTACTGTGCAAGCTGCTTTGCCACGTCTTTTAGGTGCCGCTGCTCCTCCAGGGACTGGTGCTAGTGATAACCGTCGTAAATGTCTGAAGGTCCTGAAGTTGTGGCTTGAAAGGAAAGTTTTCCCTGAATCTCTTCTGCGTCGTTATATTGATGATATTAGAGCTTCTGGTGATGATGCAACTGGTGGGTTTTCCCTGCGACGTCCTTCTAGATCTGAGCGTGCTGTAGATGATCCTATCAGGGAAATGGAAGGGATGCTTGTTGATGAGTATGGCAGCAATGCAACGTTTCAGCTGCCAGGGTTTTTTTCATCTCATAATTTTGAAGATGATGAAGAAGATGACGATCTTCCAACATCACAAAAAGAAAAAAGCACATCTGCGGGGGAACGTGTCAGTGCTTTAGACGACCTGGAAATACATGATACCTCGAGTGATAAATGCCATCGAGTTTTGGAGGATGTCGATCATGAACTTGAAATGGAAGATGTATCAGGCCAGCGGAAAGATGTAGCACCTTCCTCTTTCTGTGAGAATAAGACAAAGGAGCAATCACTGGATGTTATGGAACCTGTTGCAGAAAAATCAACCGAGTTCAATCCTCTTCCAGAGGATTCTCCTCCGCTACCTCAGGAATCACCTCCCCCTCTCCCTCCTCTACCACCTTCTCCCCCACCTCCATCCCCTCCTCTCCCGCCATCATCTCTGCCACCACCGCCTCCCGCAGCGCTGTTCCCACCTCTTCCACCACCTCCGTCTCAGCCTCCTCCACCACCACTTTCACCTCCACCTTCACCGCCGCCTCCACCTCCACCGCCTTCACAATCATTAACAACTCAACTCTCCATAGCTAGCCATCATCAGATACCATTTCAACCAGGATTTCCTCCCCCAACATATCCTTTATCGCATCAAACATACCCAGGATCTATGCAGCAAGACCGCTCTAGTATTTTCACCGGTGATCAAATTGTCCAGGGGCCTGGAAATTCTTCACGTGGAGGTCTTGTTGAGGGCGCTGGAAAACCCGAATATTTTGTGCAGCAGTCCTCCAGTTTTTCACCAGCAGGAGTGTGCAGCTCCAGGGAGCCTTCATCATTTACTTCCTCCAGACAACTAGAATTTGGGAACAGCGATGTACTTTTCAATCCTGAAGCTTCTTCACAGAACCATCGGTTTCAGCCGAGCACCCCTCTGTCCCAAAGACCTATGGTTAGGTTGCCTTCAGCACCGTCCAGTCATTTTTCGTATCCAAGCCATATTCAATCACAATCTCAGCATTCCTACACTCATCCTTACCCTTTCCCACCTCAACGTGATGATGCACGGCGATACAGAAATGAGGAACCATGGCGGATTCCTTCAAGTGGACATAGTGCAGAAAATCAGAATGGTGCCTGGATACATGGAAGAAATTCACATCCAGGCCTTCCTAGAGTCACAGACAGTTTCTTTCGGCCACCTCCAGAACGTCCACCTTCAGGGACAATGAACTATCAGCCTTCTGCTGCTAGTAACTTACAAGCTGTCCCTGCAATTCCAGGTCATACTGCTCCCCAGATGCTACCGTCTCGGCCAGATATACCTACCGTGAATTGTTGGAGGCCAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006139 GO:0006355 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009506 GO:0009605 GO:0009628 GO:0009791 GO:0009889 GO:0009908 GO:0009909 GO:0009910 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0022414 GO:0030054 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0034641 GO:0040034 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0045595 GO:0045596 GO:0046483 GO:0048367 GO:0048437 GO:0048497 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0055044 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090567 GO:0090700 GO:0099402 GO:0140110 GO:1901360 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CTD_bind PWWP

Protein Analysis

1392

Amino Acids

151.08

Weight (kDa)

8.32

Isoelectric Point (pI)

59.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PWWP	PF00855	21 - 105	9.1e-19	PWWP domain
CTK3	PF12243	776 - 895	1.2e-06	CTD kinase subunit gamma CTK3
CID	PF04818	777 - 902	1.8e-17	CID domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08230 AT5G23150 AT5G23150 AT5G23150
fragaria_vesca	FvH4_4g36930 FvH4_4g36930 FvH4_4g36930
malus_domestica	MD13G1005600.v1.1 MD16G1002500.v1.1
prunus_persica	Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1 Prupe.1G347400_v2.0.a1
pyrus_communis	pycom13g00460 pycom16g00340
rosa_chinensis	RchiOBHm_Chr4g0446691
rosa_laevigata	RLG00000005639
rosa_multiflora	Rmu_co8305917.1_g000001 Rmu_sc0001753.1_g000040
rosa_roxburghii	Rroxscaffold_5G00387050
rosa_rugosa	Rorug04G0373700 Rorug04G0373800
rosa_samantha	Rh4AG435200 Rh4BG444200 Rh4CG461500 Rh4DG443000
rosa_wichuraiana	Rw4G037210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	713
AatII	GACGTC	1 cut(s)	2770
Acc16I	TGCGCA	1 cut(s)	2010
Acc36I	ACCTGC	1 cut(s)	713
AccB1I	GGYRCC	2 cut(s)	2600, 3959
AccB7I	CCANNNNNTGG	2 cut(s)	1355, 2621
AccBSI	CCGCTC	1 cut(s)	3510
AccI	GTMKAC	1 cut(s)	2508
AccII	CGCG	2 cut(s)	997, 1107
AccIII	TCCGGA	1 cut(s)	914
AclI	AACGTT	1 cut(s)	2852
AcoI	YGGCCR	3 cut(s)	679, 4022, 4139
AcsI	RAATTY	8 cut(s)	886, 1114, 1546, 2041, 2056, 3553, 3686, 3979
AcuI	CTGAAG	9 cut(s)	144, 1497, 1806, 2115, 2672, 2681, 3738, 3774, 4029
AcvI	CACGTG	3 cut(s)	980, 1523, 3563
AcyI	GRCGYC	1 cut(s)	2767
AfaI	GTAC	5 cut(s)	158, 278, 1432, 1474, 3705
AfeI	AGCGCT	1 cut(s)	3294
AfiI	CCNNNNNNNGG	8 cut(s)	1355, 1642, 1975, 2116, 2418, 2621, 3932, 4046
AflIII	ACRYGT	4 cut(s)	781, 1522, 1890, 2956
AgeI	ACCGGT	1 cut(s)	3524
AhdI	GACNNNNNGTC	1 cut(s)	1401
AhlI	ACTAGT	1 cut(s)	224
AjiI	CACGTC	2 cut(s)	2384, 2591
Alw21I	GWGCWC	2 cut(s)	1105, 3755
AlwNI	CAGNNNCTG	4 cut(s)	1288, 1388, 2138, 2621
Ama87I	CYCGRG	2 cut(s)	2325, 2995
Aor13HI	TCCGGA	1 cut(s)	914
Aor51HI	AGCGCT	1 cut(s)	3294
ApoI	RAATTY	8 cut(s)	886, 1114, 1546, 2041, 2056, 3553, 3686, 3979
ArsI	GACNNNNNNTTYG	2 cut(s)	1957, 1989
AseI	ATTAAT	1 cut(s)	1581
AsiGI	ACCGGT	1 cut(s)	3524
Asp700I	GAANNNNTTC	4 cut(s)	2684, 2697, 3556, 3979
AspLEI	GCGC	6 cut(s)	142, 202, 1155, 2011, 3295, 3584
AspS9I	GGNCC	3 cut(s)	1403, 2656, 3545
AsuNHI	GCTAGC	1 cut(s)	3416
AvaI	CYCGRG	2 cut(s)	2325, 2995
AvaII	GGWCC	2 cut(s)	1403, 2656
AxyI	CCTNAGG	1 cut(s)	3195
BalI	TGGCCA	1 cut(s)	681
BamHI	GGATCC	1 cut(s)	466
BanI	GGYRCC	2 cut(s)	2600, 3959
BauI	CACGAG	1 cut(s)	1203
BbrPI	CACGTG	3 cut(s)	980, 1523, 3563
BbsI	GAAGAC	1 cut(s)	2266
Bbv12I	GWGCWC	2 cut(s)	1105, 3755
BbvCI	CCTCAGC	1 cut(s)	1638
BceAI	ACGGC	2 cut(s)	2140, 3908
BciVI	GTATCC	2 cut(s)	3825, 3960
BclI	TGATCA	1 cut(s)	3529
BcuI	ACTAGT	1 cut(s)	224
BfmI	CTRYAG	3 cut(s)	291, 1464, 2790
BfoI	RGCGCY	3 cut(s)	1156, 3296, 3585
BfuAI	ACCTGC	1 cut(s)	713
BfuI	GTATCC	2 cut(s)	3825, 3960
BglII	AGATCT	2 cut(s)	1611, 2777
BmcAI	AGTACT	4 cut(s)	158, 278, 1432, 1474
Bme18I	GGWCC	2 cut(s)	1403, 2656
BmeRI	GACNNNNNGTC	1 cut(s)	1401
BmeT110I	CYCGRG	2 cut(s)	2325, 2995
BmgBI	CACGTC	2 cut(s)	2384, 2591
BmgT120I	GGNCC	3 cut(s)	1403, 2656, 3545
BmrI	ACTGGG	1 cut(s)	1065
BmtI	GCTAGC	1 cut(s)	3420
BmuI	ACTGGG	1 cut(s)	1065
BpiI	GAAGAC	1 cut(s)	2266
BplI	GAGNNNNNCTC	2 cut(s)	3742, 3774
BpmI	CTGGAG	7 cut(s)	611, 1257, 2598, 3601, 3631, 3658, 4014
Bpu10I	CCTNAGC	1 cut(s)	1638
BpuEI	CTTGAG	1 cut(s)	2095
BsaAI	YACGTR	3 cut(s)	980, 1523, 3563
BsaBI	GATNNNNATC	4 cut(s)	132, 1335, 2910, 3030
BsaHI	GRCGYC	1 cut(s)	2767
BsaI	GGTCTC	2 cut(s)	1206, 2345
BsaJI	CCNNGG	8 cut(s)	8, 2367, 2615, 2864, 3487, 3541, 3648, 3914
BsaWI	WCCGGW	2 cut(s)	914, 3524
BsaXI	ACNNNNNCTCC	2 cut(s)	3558, 3588
Bsc4I	CCNNNNNNNGG	8 cut(s)	1355, 1642, 1975, 2116, 2418, 2621, 3932, 4046
Bse118I	RCCGGY	2 cut(s)	117, 3524
Bse1I	ACTGG	9 cut(s)	594, 804, 1060, 1956, 2626, 2752, 3126, 3618, 3801
Bse21I	CCTNAGG	1 cut(s)	3195
Bse3DI	GCAATG	3 cut(s)	667, 1543, 2851
Bse8I	GATNNNNATC	4 cut(s)	132, 1335, 2910, 3030
BseAI	TCCGGA	1 cut(s)	914
BseDI	CCNNGG	8 cut(s)	8, 2367, 2615, 2864, 3487, 3541, 3648, 3914
BseJI	GATNNNNATC	4 cut(s)	132, 1335, 2910, 3030
BseLI	CCNNNNNNNGG	8 cut(s)	1355, 1642, 1975, 2116, 2418, 2621, 3932, 4046
BseMI	GCAATG	3 cut(s)	667, 1543, 2851
BseNI	ACTGG	9 cut(s)	594, 804, 1060, 1956, 2626, 2752, 3126, 3618, 3801
BseRI	GAGGAG	8 cut(s)	36, 518, 2113, 2601, 3174, 3210, 3243, 3321
BseYI	CCCAGC	1 cut(s)	2520
BsgI	GTGCAG	6 cut(s)	289, 1029, 1263, 3626, 3661, 3963
Bsh1236I	CGCG	2 cut(s)	997, 1107
BshNI	GGYRCC	2 cut(s)	2600, 3959
BshTI	ACCGGT	1 cut(s)	3524
BsiHKAI	GWGCWC	2 cut(s)	1105, 3755
BsiHKCI	CYCGRG	2 cut(s)	2325, 2995
BsiSI	CCGG	3 cut(s)	118, 915, 3525
BslFI	GGGAC	6 cut(s)	1072, 1618, 2632, 3748, 4063, 4079
BslI	CCNNNNNNNGG	8 cut(s)	1355, 1642, 1975, 2116, 2418, 2621, 3932, 4046
BsmBI	CGTCTC	2 cut(s)	3327, 4140
BsmFI	GGGAC	6 cut(s)	1072, 1618, 2632, 3748, 4063, 4079
BsmI	GAATGC	3 cut(s)	2131, 2524, 3844
Bso31I	GGTCTC	2 cut(s)	1206, 2345
BsoBI	CYCGRG	2 cut(s)	2325, 2995
Bsp1286I	GDGCHC	2 cut(s)	1105, 3755
Bsp13I	TCCGGA	1 cut(s)	914
Bsp19I	CCATGG	1 cut(s)	3914
BspEI	TCCGGA	1 cut(s)	914
BspFNI	CGCG	2 cut(s)	997, 1107
BspHI	TCATGA	1 cut(s)	3034
BspMI	ACCTGC	1 cut(s)	713
BspOI	GCTAGC	1 cut(s)	3420
BspQI	GCTCTTC	1 cut(s)	1786
BspT107I	GGYRCC	2 cut(s)	2600, 3959
BspTNI	GGTCTC	2 cut(s)	1206, 2345
BsrBI	CCGCTC	1 cut(s)	3510
BsrDI	GCAATG	3 cut(s)	667, 1543, 2851
BsrFI	RCCGGY	2 cut(s)	117, 3524
BsrI	ACTGG	9 cut(s)	594, 804, 1060, 1956, 2626, 2752, 3126, 3618, 3801
BssAI	RCCGGY	2 cut(s)	117, 3524
BssECI	CCNNGG	8 cut(s)	8, 2367, 2615, 2864, 3487, 3541, 3648, 3914
BssNI	GRCGYC	1 cut(s)	2767
BssSI	CACGAG	1 cut(s)	1203
BssT1I	CCWWGG	1 cut(s)	3914
Bst2BI	CACGAG	1 cut(s)	1203
Bst6I	CTCTTC	5 cut(s)	1786, 2247, 2703, 3174, 3312
BstACI	GRCGYC	1 cut(s)	2767
BstBAI	YACGTR	3 cut(s)	980, 1523, 3563
BstDSI	CCRYGG	1 cut(s)	3914
BstFNI	CGCG	2 cut(s)	997, 1107
BstH2I	RGCGCY	3 cut(s)	1156, 3296, 3585
BstHHI	GCGC	6 cut(s)	142, 202, 1155, 2011, 3295, 3584
BstMWI	GCNNNNNNNGC	8 cut(s)	32, 104, 197, 1277, 2012, 2141, 3280, 4097
BstNSI	RCATGY	4 cut(s)	785, 1178, 1894, 2347
BstSFI	CTRYAG	3 cut(s)	291, 1464, 2790
BstUI	CGCG	2 cut(s)	997, 1107
BstV2I	GAAGAC	1 cut(s)	2266
BstX2I	RGATCY	9 cut(s)	466, 1043, 1336, 1460, 1611, 1763, 1993, 2777, 3491
BstXI	CCANNNNNNTGG	1 cut(s)	3548
BstYI	RGATCY	9 cut(s)	466, 1043, 1336, 1460, 1611, 1763, 1993, 2777, 3491
Bsu36I	CCTNAGG	1 cut(s)	3195
BsuI	GTATCC	2 cut(s)	3825, 3960
BtgI	CCRYGG	1 cut(s)	3914
BtgZI	GCGATG	3 cut(s)	366, 1012, 3714
BtrI	CACGTC	2 cut(s)	2384, 2591
BtsI	GCAGTG	1 cut(s)	306
BtsIMutI	CAGTG	9 cut(s)	306, 587, 811, 1848, 1963, 2089, 2307, 2968, 3119
BveI	ACCTGC	1 cut(s)	713
CaiI	CAGNNNCTG	4 cut(s)	1288, 1388, 2138, 2621
CciI	TCATGA	1 cut(s)	3034
CfoI	GCGC	6 cut(s)	142, 202, 1155, 2011, 3295, 3584
Cfr10I	RCCGGY	2 cut(s)	117, 3524
Cfr13I	GGNCC	3 cut(s)	1403, 2656, 3545
CseI	GACGC	1 cut(s)	2693
CsiI	ACCWGGT	1 cut(s)	379
Csp6I	GTAC	5 cut(s)	157, 277, 1431, 1473, 3704
CspAI	ACCGGT	1 cut(s)	3524
CviQI	GTAC	5 cut(s)	157, 277, 1431, 1473, 3704
DriI	GACNNNNNGTC	1 cut(s)	1401
EaeI	YGGCCR	3 cut(s)	679, 4022, 4139
Eam1104I	CTCTTC	5 cut(s)	1786, 2247, 2703, 3174, 3312
Eam1105I	GACNNNNNGTC	1 cut(s)	1401
EarI	CTCTTC	5 cut(s)	1786, 2247, 2703, 3174, 3312
EciI	GGCGGA	1 cut(s)	3934
Eco130I	CCWWGG	1 cut(s)	3914
Eco147I	AGGCCT	1 cut(s)	3993
Eco31I	GGTCTC	2 cut(s)	1206, 2345
Eco32I	GATATC	2 cut(s)	211, 1452
Eco47I	GGWCC	2 cut(s)	1403, 2656
Eco47III	AGCGCT	1 cut(s)	3294
Eco57I	CTGAAG	9 cut(s)	144, 1497, 1806, 2115, 2672, 2681, 3738, 3774, 4029
Eco72I	CACGTG	3 cut(s)	980, 1523, 3563
Eco81I	CCTNAGG	1 cut(s)	3195
Eco88I	CYCGRG	2 cut(s)	2325, 2995
EcoO109I	RGGNCCY	2 cut(s)	2656, 3545
EcoRI	GAATTC	1 cut(s)	1546
EcoRV	GATATC	2 cut(s)	211, 1452
EcoT14I	CCWWGG	1 cut(s)	3914
EcoT22I	ATGCAT	1 cut(s)	1519
ErhI	CCWWGG	1 cut(s)	3914
Esp3I	CGTCTC	2 cut(s)	3327, 4140
FalI	AAGNNNNNCTT	8 cut(s)	143, 175, 936, 968, 1726, 1758, 2808, 2840
FaqI	GGGAC	6 cut(s)	1072, 1618, 2632, 3748, 4063, 4079
FauI	CCCGC	4 cut(s)	1753, 2941, 3267, 3295
FbaI	TGATCA	1 cut(s)	3529
FblI	GTMKAC	1 cut(s)	2508
FspI	TGCGCA	1 cut(s)	2010
GlaI	GCGC	6 cut(s)	141, 201, 1154, 2010, 3294, 3583
GsaI	CCCAGC	1 cut(s)	2524
GsuI	CTGGAG	7 cut(s)	611, 1257, 2598, 3601, 3631, 3658, 4014
HaeII	RGCGCY	3 cut(s)	1156, 3296, 3585
HapII	CCGG	3 cut(s)	118, 915, 3525
HgaI	GACGC	1 cut(s)	2693
HhaI	GCGC	6 cut(s)	142, 202, 1155, 2011, 3295, 3584
Hin1I	GRCGYC	1 cut(s)	2767
Hin6I	GCGC	6 cut(s)	140, 200, 1153, 2009, 3293, 3582
HinP1I	GCGC	6 cut(s)	140, 200, 1153, 2009, 3293, 3582
HincII	GTYRAC	2 cut(s)	843, 2509
HindII	GTYRAC	2 cut(s)	843, 2509
HindIII	AAGCTT	2 cut(s)	950, 3720
HpaII	CCGG	3 cut(s)	118, 915, 3525
Hpy166II	GTNNAC	8 cut(s)	843, 941, 1502, 2294, 2491, 2509, 3935, 4040
Hpy8I	GTNNAC	8 cut(s)	843, 941, 1502, 2294, 2491, 2509, 3935, 4040
Hpy99I	CGWCG	5 cut(s)	1322, 2510, 2643, 2709, 2769
HpyF10VI	GCNNNNNNNGC	8 cut(s)	32, 104, 197, 1277, 2012, 2141, 3280, 4097
Hsp92I	GRCGYC	1 cut(s)	2767
HspAI	GCGC	6 cut(s)	140, 200, 1153, 2009, 3293, 3582
Kpn2I	TCCGGA	1 cut(s)	914
KroI	GCCGGC	1 cut(s)	117
KroNI	GCCGGC	1 cut(s)	119
Ksp22I	TGATCA	1 cut(s)	3529
LguI	GCTCTTC	1 cut(s)	1786
MabI	ACCWGGT	1 cut(s)	379
MaeIII	GTNAC	5 cut(s)	585, 809, 1424, 4003, 4079
MbiI	CCGCTC	1 cut(s)	3510
MfeI	CAATTG	1 cut(s)	2400
MflI	RGATCY	9 cut(s)	466, 1043, 1336, 1460, 1611, 1763, 1993, 2777, 3491
MhlI	GDGCHC	2 cut(s)	1105, 3755
MlsI	TGGCCA	1 cut(s)	681
MluNI	TGGCCA	1 cut(s)	681
MlyI	GAGTC	5 cut(s)	440, 593, 1868, 2504, 4011
MmeI	TCCRAC	5 cut(s)	1807, 2266, 2439, 2942, 4145
Mox20I	TGGCCA	1 cut(s)	681
Mph1103I	ATGCAT	1 cut(s)	1519
MroI	TCCGGA	1 cut(s)	914
MroNI	GCCGGC	1 cut(s)	117
MroXI	GAANNNNTTC	4 cut(s)	2684, 2697, 3556, 3979
MscI	TGGCCA	1 cut(s)	681
MseI	TTAA	7 cut(s)	453, 711, 1074, 1266, 1581, 1649, 3395
MslI	CAYNNNNRTG	1 cut(s)	2150
Msp20I	TGGCCA	1 cut(s)	681
MspA1I	CMGCKG	5 cut(s)	1277, 1642, 2606, 2860, 3067
MspI	CCGG	3 cut(s)	118, 915, 3525
MunI	CAATTG	1 cut(s)	2400
Mva1269I	GAATGC	3 cut(s)	2131, 2524, 3844
MvnI	CGCG	2 cut(s)	997, 1107
MwoI	GCNNNNNNNGC	8 cut(s)	32, 104, 197, 1277, 2012, 2141, 3280, 4097
NaeI	GCCGGC	1 cut(s)	119
NcoI	CCATGG	1 cut(s)	3914
NgoMIV	GCCGGC	1 cut(s)	117
NheI	GCTAGC	1 cut(s)	3416
NmeAIII	GCCGAG	2 cut(s)	3774, 4117
NmuCI	GTSAC	3 cut(s)	585, 1424, 4003
NsbI	TGCGCA	1 cut(s)	2010
NsiI	ATGCAT	1 cut(s)	1519
NspI	RCATGY	4 cut(s)	785, 1178, 1894, 2347
PaeI	GCATGC	1 cut(s)	1178
PaeR7I	CTCGAG	1 cut(s)	2995
PagI	TCATGA	1 cut(s)	3034
PaqCI	CACCTGC	1 cut(s)	713
PceI	AGGCCT	1 cut(s)	3993
PciI	ACATGT	2 cut(s)	781, 1890
PciSI	GCTCTTC	1 cut(s)	1786
PctI	GAATGC	3 cut(s)	2131, 2524, 3844
PdiI	GCCGGC	1 cut(s)	119
PdmI	GAANNNNTTC	4 cut(s)	2684, 2697, 3556, 3979
PflMI	CCANNNNNTGG	2 cut(s)	1355, 2621
PinAI	ACCGGT	1 cut(s)	3524
PleI	GAGTC	5 cut(s)	439, 592, 1868, 2504, 4010
PmaCI	CACGTG	3 cut(s)	980, 1523, 3563
PmlI	CACGTG	3 cut(s)	980, 1523, 3563
PpsI	GAGTC	5 cut(s)	439, 592, 1868, 2504, 4010
Ppu21I	YACGTR	3 cut(s)	980, 1523, 3563
PpuMI	RGGWCCY	1 cut(s)	2656
PscI	ACATGT	2 cut(s)	781, 1890
PshBI	ATTAAT	1 cut(s)	1581
Psp1406I	AACGTT	1 cut(s)	2852
Psp5II	RGGWCCY	1 cut(s)	2656
PspCI	CACGTG	3 cut(s)	980, 1523, 3563
PspFI	CCCAGC	1 cut(s)	2520
PspPI	GGNCC	3 cut(s)	1403, 2656, 3545
PspPPI	RGGWCCY	1 cut(s)	2656
PspXI	VCTCGAGB	1 cut(s)	2995
PsrI	GAACNNNNNNTAC	2 cut(s)	2433, 2465
PstNI	CAGNNNCTG	4 cut(s)	1288, 1388, 2138, 2621
PsuI	RGATCY	9 cut(s)	466, 1043, 1336, 1460, 1611, 1763, 1993, 2777, 3491
PvuII	CAGCTG	3 cut(s)	1277, 1642, 2860
RsaI	GTAC	5 cut(s)	158, 278, 1432, 1474, 3705
RsaNI	GTAC	5 cut(s)	157, 277, 1431, 1473, 3704
RseI	CAYNNNNRTG	1 cut(s)	2150
SalI	GTCGAC	1 cut(s)	2507
SapI	GCTCTTC	1 cut(s)	1786
SaqAI	TTAA	7 cut(s)	453, 711, 1074, 1266, 1581, 1649, 3395
Sau96I	GGNCC	3 cut(s)	1403, 2656, 3545
ScaI	AGTACT	4 cut(s)	158, 278, 1432, 1474
SchI	GAGTC	5 cut(s)	440, 593, 1868, 2504, 4011
SduI	GDGCHC	2 cut(s)	1105, 3755
SexAI	ACCWGGT	1 cut(s)	379
SfcI	CTRYAG	3 cut(s)	291, 1464, 2790
Sfr274I	CTCGAG	1 cut(s)	2995
SgrAI	CRCCGGYG	1 cut(s)	3524
SinI	GGWCC	2 cut(s)	1403, 2656
SlaI	CTCGAG	1 cut(s)	2995
SmiMI	CAYNNNNRTG	1 cut(s)	2150
SmlI	CTYRAG	2 cut(s)	2074, 2995
SmoI	CTYRAG	2 cut(s)	2074, 2995
SpeI	ACTAGT	1 cut(s)	224
SphI	GCATGC	1 cut(s)	1178
SseBI	AGGCCT	1 cut(s)	3993
SspI	AATATT	1 cut(s)	3599
StuI	AGGCCT	1 cut(s)	3993
StyI	CCWWGG	1 cut(s)	3914
TaqI	TCGA	7 cut(s)	760, 796, 830, 2508, 2996, 3013, 3030
TatI	WGTACW	5 cut(s)	156, 276, 1430, 1472, 3703
TauI	GCSGC	4 cut(s)	997, 1594, 2606, 3367
Tru1I	TTAA	7 cut(s)	453, 711, 1074, 1266, 1581, 1649, 3395
Tru9I	TTAA	7 cut(s)	453, 711, 1074, 1266, 1581, 1649, 3395
TscAI	CASTG	9 cut(s)	313, 594, 811, 1848, 1963, 2089, 2314, 2968, 3126
TseFI	GTSAC	3 cut(s)	585, 1424, 4003
Tsp45I	GTSAC	3 cut(s)	585, 1424, 4003
TspGWI	ACGGA	3 cut(s)	1312, 2184, 3309
TspRI	CASTG	9 cut(s)	313, 594, 811, 1848, 1963, 2089, 2314, 2968, 3126
Van91I	CCANNNNNTGG	2 cut(s)	1355, 2621
VpaK11BI	GGWCC	2 cut(s)	1403, 2656
VspI	ATTAAT	1 cut(s)	1581
XapI	RAATTY	8 cut(s)	886, 1114, 1546, 2041, 2056, 3553, 3686, 3979
XbaI	TCTAGA	1 cut(s)	2774
XceI	RCATGY	4 cut(s)	785, 1178, 1894, 2347
XcmI	CCANNNNNNNNNTGG	1 cut(s)	49
XhoI	CTCGAG	1 cut(s)	2995
XmiI	GTMKAC	1 cut(s)	2508
XmnI	GAANNNNTTC	4 cut(s)	2684, 2697, 3556, 3979
ZraI	GACGTC	1 cut(s)	2768
ZrmI	AGTACT	4 cut(s)	158, 278, 1432, 1474
Zsp2I	ATGCAT	1 cut(s)	1519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.