Rh4BG444200

ENHANCER OF AG-4 protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Forward (+)
58393817 .. 58406860
13044 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG444200.1

Sequence Viewer

Length: 4383 bp
ATGCCTCCGTCGCGTAGACGCGGAGCGAACAAGGCTAAGAACAAGGCGGAGTTGAGTCTCGGCGATCTTGTCCTCGCCAAGGTCAAGGGTCACCCCTTTTGGCCCGCCAAGATTAGCAAGCCTGAAGATTGGGAGAAAGCCCCTGATCCTAAGAAGTATTTTGTCCAATTTTTTGGAACAGAAGAGATAGCTTTTGTTGCACCTGTAGATATTCAGGCATTCACTAGTGAGGCAAAAAGTAAAGTATCAGCTCGCTGTCAAGGCAAAACAAAGTATTTTTCCCAAGCTGTTAAGGAAATATGTGAAGCATTTGATGAGTTACAGAAAAAGAAATCAAATGATGTGAGGATTGATACTGATAGATCAGACCTTGGATGTGATGCTCCATCTGTTGACGGGGTAGAGGATGATGGGGTTAATGTCGAGATAAAAGATGATAAGGGTGCAGTCGGTTCTGATGGAGATACAGTTAAGGAAGAAGACACAGGTGATTTTGGCTCTAAGTTGGAGCGTTGTTCACAGATACGAGGTGAAAATGATACTGAAGATGTAGACCCATCTACCTCTTGTGGAGCAAAGGAGAGTTCATCTCCTGTCTTTTCTTCTGAGGAAAATAATAAAATGTCCTCATTTGTTCACCCTAAGGTACCAAAGACATCCAATTCTTCCCATTTGAAGAAAGAAGTTTCTGATTATAAGTATGAAGATGATGATATTCGCACCAAGAAACATGGTGAGGGACAGAGGTCATTAGTAAATGGTCACAAGATGACAAAGATGGGTAGTGGATCAAAGAGGAGAAGTGATGGGATGGTTGAAGTACACAAGGGCAGCTCTTTAACGTCATTGAAGGAAGATGGCTCTGTTGGTTGTGTTGATCGCCCACAATCTGGTGAGCGATTGAGAGATGGAACAACAGGCAAAACTATCTCTGGTGGCAATAAAAGAAAACTATCCCCAGATTCGCTTAAACCTGAAACTGGAATCAGGGATGGGAAAAGGACGAAAGACCTGCTTAAAGCCAAAAGGCATGTCAAAGTCCTAGATGAGGCAAAGGACTCTGTGGATGATCTTGAAGCCCAGGCCAGAGATAGACTCTCTGGAAGAACAAAGAATGCTCAAGTTGGGCGTGGAAAGCCTGATTTGGGAGCAAATGATATTTCACATCTGTCCAAAAAGTCAAAGCATGTAGATGCAGGTGAAAATACCCGGCGGGGTTCATTCTCAAAAAGTCCTCCGAGTTCTGATGTTGCTGATCAGAAGACGGTTAAAAAATTAGATTCAAAAATGTCTACTTCACGTGGTAAACCAGAGAACAATCTGGTATCCAAATCCCAAAATGTCAACGCTTCTGGTGATGAAGCTGTTCTACCCCTAGCAAAGCGTCGTCGTCGAGCGATGGAAGCTATGTCTGATTCTGACACTTTGGTTTCTGATGAGAAAATGGAAAAGGCTCCTGTTCAGAAGAATAATATAGCACGGTCTAGTGATGTCAAAGTTTCAGCACCTCAGACACAGAAAAAACGTAGGGCTGTATGCCTTTATGATGATGAGGAGGAGGAAGAAAAACCCAAAACACCCGTTCATGGAGGCTCTTCCCGAAATGTTAAAGCACCTTCAAATTCAGATGCTATAAAGAGCACTGGTGAAAATATTGAGAGTTCTGATACTGCTCTACACAGTACAAAACATGCTACTGAAGTTCATGGCAGCCATACAAAGGAATCATCTTCCCAGCTGAAGAATGGGTCTCTGTCACCTAGCAAACCTGCAGTAGATGAGAAGAGGTCTCAAAAGCAAACTCAAACTGATGAAAAGAGGCTTGAAAAGGCAGTGCACATCTACCGGAGTCCAGCAAAATTAGAACCTGACCAGCAGGTGTCCAAAGACTCAAAACCAACCTTGACTTCTCCTAAGAAGTCTCCTATGTTGGCTACTGCTACTAAACCTGCAGTTGAACAACAAAAAGCCACAAAAGCTCCGGTTAAAGGCTCTAATACTGCAACTCAGAAAAAGGGTCAGGCTGCATCTGGCAACAGTTCGAGAACAGTTTCTAATAGTTTGGTTTCTTCTCAAAAACCTAAACCTACTGCAAGACCAATCTCCCGGATCAATGACTCCGCTATTTTACAGGAAAATACCATAGAGTACAATTTGTTACCCGCGGAAAGAATGGAAGTTGGAAAAGAAGATAAAAGTGCCTTATTGGTTGATTCTAAGACTCTGGAATCTTCTTCGTCTATGAAGCATCTAATTGCAGTTGCACAAGCAAAAAGGAAACAAACGCAGTCGCATAACTACTTCTTTGAAATTTCCAGTTCTGCTTTTTTATCTAGCACAGATGGGATGTGCCCCAGTCCTTTGGCAGTTCAGGGTCTTTATCCCATTAGCAACAGTGCATTGCAGGCAGATATTCCAGGATCTATTCAACCCACAAACATAGCTTCTCCATCTACTCATAGTCGCCCTTCTGCATTACAAAATCAACTAGACATCGAGGACATTTCAGAAAGAAGAGTTAGTTCTGGGCATCAGACAGCTGGAGGATCACTAAGTGGTGGTACCGAGGCAGCTGTTGCTCGTGATGCTTTTGAAGGAATGATAGAAACTTTGTCAAGGACCAAGGAAAGTATTAGTCGGGCAACTCGCTGTGCCCTTGATTGTGCCAAGTATGGTATAGCTAACGAGGTTGTGGAACTGCTTATCCGAAAGCTGGAGAGTGAGCCGAGTTTTCATCGTAAAGTCGACCTGTTCTTTCTTGTGGACTCCATCACACAAATCTCACATACTCAAAAAGGTATTGCTGGAGCTTCATATGTTCCAACTGTTCAAGCAGCATTGCCACGGCTTCTAGGTGCTGCTGCTCCACCTGGTTCTGGTGCTCGTGAGAATCGTCGTCAGTGTCATAAGGTTTTACGGCTCTGGCTTGAGAGGAAAATTTTTCCACAAGCAGTTCTTCGTCGGTACATGGATGACATTGGAGTTTCAAATGATGATACAACTGCAGGTTTCTCTCTTAGACGTCCATCTCGATCAGAGCGTGCTATTGATGATCCAATCAGGGAAATGGAAGGAATGTTTGTGGATGAGTATGGCAGTAATGCTACATTTCAGTTGCCCGGATTTCTATCTTCTCATGCATTTGAAGATGATGATGATGAAGAAGAAGAAGAAGTTCCAAGCTGTTCATATAAGGAGGCTAGTCATCCATCACCGGTAGAAACTACCCATGCCTCTGGGGAGTCAGAAACCTGTGCTGTTACTCCAAATGATAGGCGGCATTGCATCTTAGAGGATGTGGACGGTGAGCTTGAAATGGAAGACGTTTCTGGACACCCGAAGGATGAAAGACCGTCATCTGTTAATGGTTCTTTTGAAATGGATCCACCACAGCAAGGGCCACATAGGGTCATGGAACCAGCTTTAAATGCTTGCACTGACTTGCCCCCACTTCCAGAGGGTTCCCCACCTTTGCCTCTTGATTCTCCTCCTCCACCCCCTCCTTTGCCTCCCTCACCACCACCACCACCTCCCCCACTATCTCCATCACCGCCACCACCACCTCCGCCTCCCCCCTCACAGCCTCCTCCTCCTCTACCACTATCAGGTCCTCCACATTTGTTGATTCCTCAGTCATCTAGACCAACCCAGCCTTCATTAGTAGCCCAACAGATGCTGCCACCTCAATCATCAATCCATTCTTCACCACAGTTGGCATATCAACCTTCTGTACCTCATGAATACTGCAGCACTAGTGGCAACCAACTAGTCCAAATGACTGGAAATGCTCCTCATGGGGGTGCTATTGATTCTGCCGTGAAAACCGAAATGTTTCCACAGCAGCAAGCTTGCTTTGTCCCAGCAGGAGTATGTGGCCCTCGAGAACCTTCTGGATTTAATTCTACAAGGCAAGTAGAGCATGGACACAGTGACATTTTCATAAACACACAAGTCTCTCAACCAAACCAACAATTTCAACAAGGTAATGCACCTTTTGCTCCTAGACCTTTACCTCCAGCCCCGCCACAAAATCCATCCAGTCACTTCTCCTATGCAAAGCCCCCAGTTCAACAACATCCCCAGCATCCGTACCGCCCCCCATACCCTTTGCCACCCGTTCCTGATAATCAGAGACGATTTGTTGCTGATGAACAACGGGGTGTCTGGATAAATGGTGGGAGGCCTCCACACCCAGGACCACCATTTGGCCATGAAGGTTTTTTTCGGCCACCAGTTGAGAGGCCACCAGCAAATAATATGAGTTTTCAACGTCCTGCTCCTAATAATGTACCCTCTGGAGCTCCAATATCAGGTCATGGTGCTGCTCAGATCTTGCCGTGTAGGCCTGATATTTCTGCTGTTAATTGTTGGAGACCAGCTTAA

Protein Analysis

1460

Amino Acids

158.36

Weight (kDa)

7.59

Isoelectric Point (pI)

63.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 21 - 104 5.4e-19 PWWP domain
CTK3 PF12243 861 - 980 3.1e-07 CTD kinase subunit gamma CTK3
CID PF04818 863 - 987 1.3e-15 CID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 696
AarI CACCTGC 2 cut(s) 1187, 1867
AatII GACGTC 1 cut(s) 3025
Acc36I ACCTGC 6 cut(s) 1020, 1187, 1777, 1867, 1957, 2996
Acc65I GGTACC 2 cut(s) 646, 2561
AccB1I GGYRCC 2 cut(s) 646, 2561
AccB7I CCANNNNNTGG 2 cut(s) 890, 4205
AccI GTMKAC 4 cut(s) 16, 552, 1292, 2745
AccII CGCG 3 cut(s) 13, 21, 2165
AclWI GGATC 8 cut(s) 140, 796, 2117, 2428, 2554, 3047, 3377, 3390
AcoI YGGCCR 2 cut(s) 4207, 4226
AcsI RAATTY 3 cut(s) 1621, 2310, 2937
AcuI CTGAAG 4 cut(s) 144, 564, 1719, 1760
AcvI CACGTG 1 cut(s) 1301
AcyI GRCGYC 1 cut(s) 3022
AdeI CACNNNGTG 1 cut(s) 2555
AfaI GTAC 9 cut(s) 648, 822, 1684, 2150, 2563, 2966, 3732, 4091, 4290
AgeI ACCGGT 1 cut(s) 3214
AhlI ACTAGT 3 cut(s) 224, 3752, 3766
AjnI CCWGG 4 cut(s) 1080, 2416, 2869, 4192
AjuI GAANNNNNNNTTGG 4 cut(s) 1891, 1923, 3637, 3669
AloI GAACNNNNNNTCC 2 cut(s) 2688, 2720
Alw21I GWGCWC 4 cut(s) 1643, 1839, 2884, 4303
Alw26I GTCTC 7 cut(s) 62, 1755, 1794, 1926, 3958, 4126, 4366
Alw44I GTGCAC 1 cut(s) 1835
AlwI GGATC 8 cut(s) 140, 796, 2117, 2428, 2554, 3047, 3377, 3390
AlwNI CAGNNNCTG 1 cut(s) 3676
Ama87I CYCGRG 1 cut(s) 3879
AoxI GGCC 9 cut(s) 101, 1083, 3398, 3874, 4181, 4207, 4226, 4241, 4343
ApaLI GTGCAC 1 cut(s) 1835
ApoI RAATTY 3 cut(s) 1621, 2310, 2937
ArsI GACNNNNNNTTYG 2 cut(s) 1017, 1049
AsiGI ACCGGT 1 cut(s) 3214
Asp700I GAANNNNTTC 4 cut(s) 1365, 2050, 3174, 3831
Asp718I GGTACC 2 cut(s) 646, 2561
AspS9I GGNCC 6 cut(s) 102, 2619, 3398, 3608, 3875, 4196
AsuC2I CCSGG 3 cut(s) 1210, 2107, 3120
AvaI CYCGRG 1 cut(s) 3879
AvaII GGWCC 3 cut(s) 2619, 3608, 4196
AxyI CCTNAGG 1 cut(s) 642
BaeGI GKGCMC 3 cut(s) 1839, 2354, 2656
BalI TGGCCA 1 cut(s) 4209
BamHI GGATCC 1 cut(s) 3382
BanI GGYRCC 2 cut(s) 646, 2561
BanII GRGCYC 1 cut(s) 4303
BarI GAAGNNNNNNTAC 2 cut(s) 1353, 1385
BauI CACGAG 2 cut(s) 2580, 2883
BbrPI CACGTG 1 cut(s) 1301
BbsI GAAGAC 3 cut(s) 486, 1268, 3327
Bbv12I GWGCWC 4 cut(s) 1643, 1839, 2884, 4303
BceAI ACGGC 4 cut(s) 2861, 2933, 3800, 4321
BcgI CGANNNNNNTGC 2 cut(s) 994, 1028
BciT130I CCWGG 4 cut(s) 1082, 2418, 2871, 4194
BciVI GTATCC 1 cut(s) 1336
BclI TGATCA 1 cut(s) 1255
BcnI CCSGG 3 cut(s) 1210, 2107, 3120
BcoDI GTCTC 7 cut(s) 62, 1755, 1794, 1926, 3958, 4126, 4366
BcuI ACTAGT 3 cut(s) 224, 3752, 3766
BfmI CTRYAG 5 cut(s) 204, 1770, 1950, 3003, 3745
BfuAI ACCTGC 6 cut(s) 1020, 1187, 1777, 1867, 1957, 2996
BfuI GTATCC 1 cut(s) 1336
BglI GCCNNNNNGGC 1 cut(s) 4342
BglII AGATCT 1 cut(s) 4329
Bme1390I CCNGG 7 cut(s) 1082, 1210, 2107, 2418, 2871, 3120, 4194
Bme18I GGWCC 3 cut(s) 2619, 3608, 4196
BmeT110I CYCGRG 1 cut(s) 3879
BmgT120I GGNCC 6 cut(s) 102, 2619, 3398, 3608, 3875, 4196
BmiI GGNNCC 6 cut(s) 648, 1455, 2563, 3384, 3417, 3463
BmrFI CCNGG 7 cut(s) 1082, 1210, 2107, 2418, 2871, 3120, 4194
BmrI ACTGGG 2 cut(s) 2349, 4058
BmuI ACTGGG 2 cut(s) 2349, 4058
BoxI GACNNNNGTC 1 cut(s) 745
BpiI GAAGAC 3 cut(s) 486, 1268, 3327
BplI GAGNNNNNCTC 4 cut(s) 574, 606, 1080, 1112
BpmI CTGGAG 5 cut(s) 2562, 2735, 2826, 3999, 4317
BpuEI CTTGAG 2 cut(s) 1104, 2948
BpuMI CCSGG 3 cut(s) 1210, 2107, 3120
BsaAI YACGTR 1 cut(s) 1301
BsaBI GATNNNNATC 1 cut(s) 3127
BsaHI GRCGYC 1 cut(s) 3022
BsaI GGTCTC 3 cut(s) 1755, 1794, 4366
BsaJI CCNNGG 8 cut(s) 78, 370, 1080, 2163, 2565, 2622, 2843, 4192
BsaWI WCCGGW 3 cut(s) 1845, 1981, 3214
BsaXI ACNNNNNCTCC 4 cut(s) 453, 483, 1963, 1993
Bse118I RCCGGY 1 cut(s) 3214
Bse1I ACTGG 8 cut(s) 985, 1648, 2316, 2355, 3784, 4038, 4064, 4232
Bse21I CCTNAGG 1 cut(s) 642
Bse3DI GCAATG 3 cut(s) 2399, 2837, 3280
Bse8I GATNNNNATC 1 cut(s) 3127
BseBI CCWGG 4 cut(s) 1082, 2418, 2871, 4194
BseDI CCNNGG 8 cut(s) 78, 370, 1080, 2163, 2565, 2622, 2843, 4192
BseJI GATNNNNATC 1 cut(s) 3127
BseMI GCAATG 3 cut(s) 2399, 2837, 3280
BseMII CTCAG 5 cut(s) 597, 1523, 2021, 3644, 4340
BseNI ACTGG 8 cut(s) 985, 1648, 2316, 2355, 3784, 4038, 4064, 4232
BseRI GAGGAG 9 cut(s) 811, 1568, 1571, 3477, 3480, 3576, 3579, 3582, 3780
BseSI GKGCMC 3 cut(s) 1839, 2354, 2656
BseYI CCCAGC 4 cut(s) 1734, 3648, 3859, 4080
BsgI GTGCAG 1 cut(s) 465
Bsh1236I CGCG 3 cut(s) 13, 21, 2165
BshFI GGCC 9 cut(s) 103, 1085, 3400, 3876, 4183, 4209, 4228, 4243, 4345
BshNI GGYRCC 2 cut(s) 646, 2561
BshTI ACCGGT 1 cut(s) 3214
BsiHKAI GWGCWC 4 cut(s) 1643, 1839, 2884, 4303
BsiHKCI CYCGRG 1 cut(s) 3879
BsiSI CCGG 6 cut(s) 1210, 1846, 1982, 2107, 3120, 3215
BslFI GGGAC 2 cut(s) 753, 3842
BsmAI GTCTC 7 cut(s) 62, 1755, 1794, 1926, 3958, 4126, 4366
BsmBI CGTCTC 1 cut(s) 4126
BsmFI GGGAC 2 cut(s) 753, 3842
BsmI GAATGC 2 cut(s) 218, 1120
BsnI GGCC 9 cut(s) 103, 1085, 3400, 3876, 4183, 4209, 4228, 4243, 4345
Bso31I GGTCTC 3 cut(s) 1755, 1794, 4366
BsoBI CYCGRG 1 cut(s) 3879
Bsp1286I GDGCHC 6 cut(s) 1643, 1839, 2354, 2656, 2884, 4303
BspANI GGCC 9 cut(s) 103, 1085, 3400, 3876, 4183, 4209, 4228, 4243, 4345
BspCNI CTCAG 5 cut(s) 598, 1522, 2020, 3643, 4339
BspFNI CGCG 3 cut(s) 13, 21, 2165
BspHI TCATGA 1 cut(s) 3736
BspLI GGNNCC 6 cut(s) 648, 1455, 2563, 3384, 3417, 3463
BspMAI CTGCAG 4 cut(s) 1774, 1954, 3007, 3749
BspMI ACCTGC 6 cut(s) 1020, 1187, 1777, 1867, 1957, 2996
BspPI GGATC 8 cut(s) 140, 796, 2117, 2428, 2554, 3047, 3377, 3390
BspQI GCTCTTC 1 cut(s) 1600
BspT107I GGYRCC 2 cut(s) 646, 2561
BspTNI GGTCTC 3 cut(s) 1755, 1794, 4366
BsrDI GCAATG 3 cut(s) 2399, 2837, 3280
BsrFI RCCGGY 1 cut(s) 3214
BsrI ACTGG 8 cut(s) 985, 1648, 2316, 2355, 3784, 4038, 4064, 4232
BssAI RCCGGY 1 cut(s) 3214
BssECI CCNNGG 8 cut(s) 78, 370, 1080, 2163, 2565, 2622, 2843, 4192
BssNI GRCGYC 1 cut(s) 3022
BssSI CACGAG 2 cut(s) 2580, 2883
BssT1I CCWWGG 3 cut(s) 78, 370, 2622
Bst2BI CACGAG 2 cut(s) 2580, 2883
Bst2UI CCWGG 4 cut(s) 1082, 2418, 2871, 4194
Bst6I CTCTTC 4 cut(s) 177, 1600, 1778, 2509
BstACI GRCGYC 1 cut(s) 3022
BstAPI GCANNNNNTGC 2 cut(s) 2576, 3995
BstBAI YACGTR 1 cut(s) 1301
BstC8I GCNNGC 8 cut(s) 105, 119, 253, 2406, 3042, 3433, 3846, 3850
BstDSI CCRYGG 2 cut(s) 2163, 2843
BstEII GGTNACC 1 cut(s) 89
BstENI CCTNNNNNAGG 2 cut(s) 77, 1046
BstFNI CGCG 3 cut(s) 13, 21, 2165
BstMAI GTCTC 7 cut(s) 62, 1755, 1794, 1926, 3958, 4126, 4366
BstNI CCWGG 4 cut(s) 1082, 2418, 2871, 4194
BstNSI RCATGY 3 cut(s) 1034, 1190, 1694
BstPAI GACNNNNGTC 1 cut(s) 745
BstPI GGTNACC 1 cut(s) 89
BstSCI CCNGG 7 cut(s) 1080, 1208, 2105, 2416, 2869, 3118, 4192
BstSFI CTRYAG 5 cut(s) 204, 1770, 1950, 3003, 3745
BstSLI GKGCMC 3 cut(s) 1839, 2354, 2656
BstUI CGCG 3 cut(s) 13, 21, 2165
BstV2I GAAGAC 3 cut(s) 486, 1268, 3327
BstX2I RGATCY 3 cut(s) 2420, 3382, 4329
BstXI CCANNNNNNTGG 4 cut(s) 173, 2362, 3236, 3779
BstYI RGATCY 3 cut(s) 2420, 3382, 4329
Bsu36I CCTNAGG 1 cut(s) 642
BsuI GTATCC 1 cut(s) 1336
BsuRI GGCC 9 cut(s) 103, 1085, 3400, 3876, 4183, 4209, 4228, 4243, 4345
BtgI CCRYGG 2 cut(s) 2163, 2843
BtgZI GCGATG 1 cut(s) 1412
BtsI GCAGTG 1 cut(s) 1839
BtsIMutI CAGTG 6 cut(s) 1641, 1839, 2401, 2906, 3435, 3934
BveI ACCTGC 6 cut(s) 1020, 1187, 1777, 1867, 1957, 2996
Cac8I GCNNGC 8 cut(s) 105, 119, 253, 2406, 3042, 3433, 3846, 3850
CaiI CAGNNNCTG 1 cut(s) 3676
CciI TCATGA 1 cut(s) 3736
Cfr10I RCCGGY 1 cut(s) 3214
Cfr13I GGNCC 6 cut(s) 102, 2619, 3398, 3608, 3875, 4196
Cfr42I CCGCGG 1 cut(s) 2166
CseI GACGC 2 cut(s) 27, 1373
CsiI ACCWGGT 1 cut(s) 2869
Csp6I GTAC 9 cut(s) 647, 821, 1683, 2149, 2562, 2965, 3731, 4090, 4289
CspAI ACCGGT 1 cut(s) 3214
CspCI CAANNNNNGTGG 2 cut(s) 3603, 3638
CviQI GTAC 9 cut(s) 647, 821, 1683, 2149, 2562, 2965, 3731, 4090, 4289
DraI TTTAAA 1 cut(s) 3426
DraIII CACNNNGTG 1 cut(s) 2555
EaeI YGGCCR 2 cut(s) 4207, 4226
Eam1104I CTCTTC 4 cut(s) 177, 1600, 1778, 2509
EarI CTCTTC 4 cut(s) 177, 1600, 1778, 2509
EciI GGCGGA 2 cut(s) 62, 3555
Ecl136II GAGCTC 1 cut(s) 4301
Eco130I CCWWGG 3 cut(s) 78, 370, 2622
Eco147I AGGCCT 2 cut(s) 4183, 4345
Eco24I GRGCYC 1 cut(s) 4303
Eco31I GGTCTC 3 cut(s) 1755, 1794, 4366
Eco47I GGWCC 3 cut(s) 2619, 3608, 4196
Eco53kI GAGCTC 1 cut(s) 4301
Eco57I CTGAAG 4 cut(s) 144, 564, 1719, 1760
Eco72I CACGTG 1 cut(s) 1301
Eco81I CCTNAGG 1 cut(s) 642
Eco88I CYCGRG 1 cut(s) 3879
Eco91I GGTNACC 1 cut(s) 89
EcoICRI GAGCTC 1 cut(s) 4301
EcoNI CCTNNNNNAGG 2 cut(s) 77, 1046
EcoO109I RGGNCCY 1 cut(s) 3608
EcoO65I GGTNACC 1 cut(s) 89
EcoRII CCWGG 4 cut(s) 1080, 2416, 2869, 4192
EcoT14I CCWWGG 3 cut(s) 78, 370, 2622
EcoT22I ATGCAT 1 cut(s) 3142
EcoT38I GRGCYC 1 cut(s) 4303
ErhI CCWWGG 3 cut(s) 78, 370, 2622
Esp3I CGTCTC 1 cut(s) 4126
FalI AAGNNNNNCTT 4 cut(s) 999, 1031, 2940, 2972
FaqI GGGAC 2 cut(s) 753, 3842
FauI CCCGC 4 cut(s) 112, 1206, 2170, 4029
FauNDI CATATG 1 cut(s) 2815
FbaI TGATCA 1 cut(s) 1255
FblI GTMKAC 4 cut(s) 16, 552, 1292, 2745
FriOI GRGCYC 1 cut(s) 4303
GsaI CCCAGC 4 cut(s) 1738, 3652, 3863, 4084
GsuI CTGGAG 5 cut(s) 2562, 2735, 2826, 3999, 4317
HaeIII GGCC 9 cut(s) 103, 1085, 3400, 3876, 4183, 4209, 4228, 4243, 4345
HapII CCGG 6 cut(s) 1210, 1846, 1982, 2107, 3120, 3215
HgaI GACGC 2 cut(s) 27, 1373
Hin1I GRCGYC 1 cut(s) 3022
HincII GTYRAC 3 cut(s) 394, 1345, 2746
HindII GTYRAC 3 cut(s) 394, 1345, 2746
HindIII AAGCTT 1 cut(s) 3846
HpaII CCGG 6 cut(s) 1210, 1846, 1982, 2107, 3120, 3215
Hpy99I CGWCG 6 cut(s) 13, 1389, 1392, 1395, 2898, 2964
HpyCH4IV ACGT 6 cut(s) 842, 1300, 1525, 3022, 3324, 4270
HpySE526I ACGT 6 cut(s) 842, 1300, 1525, 3022, 3324, 4270
Hsp92I GRCGYC 1 cut(s) 3022
KpnI GGTACC 2 cut(s) 650, 2565
Ksp22I TGATCA 1 cut(s) 1255
KspI CCGCGG 1 cut(s) 2166
LguI GCTCTTC 1 cut(s) 1600
MabI ACCWGGT 1 cut(s) 2869
MaeII ACGT 6 cut(s) 842, 1300, 1525, 3022, 3324, 4270
MaeIII GTNAC 8 cut(s) 89, 318, 761, 1755, 2157, 3259, 3929, 4040
MflI RGATCY 3 cut(s) 2420, 3382, 4329
MhlI GDGCHC 6 cut(s) 1643, 1839, 2354, 2656, 2884, 4303
MlsI TGGCCA 1 cut(s) 4209
MluNI TGGCCA 1 cut(s) 4209
MlyI GAGTC 9 cut(s) 64, 1052, 1089, 1858, 1883, 2111, 2215, 2759, 3251
MmeI TCCRAC 4 cut(s) 486, 2161, 2846, 4349
Mox20I TGGCCA 1 cut(s) 4209
Mph1103I ATGCAT 1 cut(s) 3142
MroXI GAANNNNTTC 4 cut(s) 1365, 2050, 3174, 3831
MscI TGGCCA 1 cut(s) 4209
MslI CAYNNNNRTG 2 cut(s) 1191, 3798
Msp20I TGGCCA 1 cut(s) 4209
MspA1I CMGCKG 4 cut(s) 1738, 2165, 2540, 2573
MspI CCGG 6 cut(s) 1210, 1846, 1982, 2107, 3120, 3215
MspR9I CCNGG 7 cut(s) 1082, 1210, 2107, 2418, 2871, 3120, 4194
Mva1269I GAATGC 2 cut(s) 218, 1120
MvaI CCWGG 4 cut(s) 1082, 2418, 2871, 4194
MvnI CGCG 3 cut(s) 13, 21, 2165
NciI CCSGG 3 cut(s) 1210, 2107, 3120
NdeI CATATG 1 cut(s) 2815
NlaIV GGNNCC 6 cut(s) 648, 1455, 2563, 3384, 3417, 3463
NmeAIII GCCGAG 2 cut(s) 39, 2751
NmuCI GTSAC 5 cut(s) 89, 761, 1755, 3929, 4040
NsiI ATGCAT 1 cut(s) 3142
NspI RCATGY 3 cut(s) 1034, 1190, 1694
PaeR7I CTCGAG 1 cut(s) 3879
PagI TCATGA 1 cut(s) 3736
PaqCI CACCTGC 2 cut(s) 1187, 1867
PceI AGGCCT 2 cut(s) 4183, 4345
PciSI GCTCTTC 1 cut(s) 1600
PcsI WCGNNNNNNNCGW 3 cut(s) 2890, 3028, 3037
PctI GAATGC 2 cut(s) 218, 1120
PdmI GAANNNNTTC 4 cut(s) 1365, 2050, 3174, 3831
PflMI CCANNNNNTGG 2 cut(s) 890, 4205
PfoI TCCNGGA 2 cut(s) 2105, 2416
PinAI ACCGGT 1 cut(s) 3214
PleI GAGTC 9 cut(s) 63, 1052, 1089, 1857, 1883, 2111, 2215, 2759, 3250
PmaCI CACGTG 1 cut(s) 1301
PmlI CACGTG 1 cut(s) 1301
PpsI GAGTC 9 cut(s) 63, 1052, 1089, 1857, 1883, 2111, 2215, 2759, 3250
Ppu21I YACGTR 1 cut(s) 1301
PpuMI RGGWCCY 1 cut(s) 3608
PshAI GACNNNNGTC 1 cut(s) 745
PsiI TTATAA 1 cut(s) 696
Psp124BI GAGCTC 1 cut(s) 4303
Psp5II RGGWCCY 1 cut(s) 3608
Psp6I CCWGG 4 cut(s) 1080, 2416, 2869, 4192
PspCI CACGTG 1 cut(s) 1301
PspEI GGTNACC 1 cut(s) 89
PspFI CCCAGC 4 cut(s) 1734, 3648, 3859, 4080
PspGI CCWGG 4 cut(s) 1080, 2416, 2869, 4192
PspN4I GGNNCC 6 cut(s) 648, 1455, 2563, 3384, 3417, 3463
PspPI GGNCC 6 cut(s) 102, 2619, 3398, 3608, 3875, 4196
PspPPI RGGWCCY 1 cut(s) 3608
PstI CTGCAG 4 cut(s) 1774, 1954, 3007, 3749
PstNI CAGNNNCTG 1 cut(s) 3676
PsuI RGATCY 3 cut(s) 2420, 3382, 4329
PvuII CAGCTG 3 cut(s) 1738, 2540, 2573
RsaI GTAC 9 cut(s) 648, 822, 1684, 2150, 2563, 2966, 3732, 4091, 4290
RsaNI GTAC 9 cut(s) 647, 821, 1683, 2149, 2562, 2965, 3731, 4090, 4289
RseI CAYNNNNRTG 2 cut(s) 1191, 3798
SacI GAGCTC 1 cut(s) 4303
SacII CCGCGG 1 cut(s) 2166
SalI GTCGAC 1 cut(s) 2744
SapI GCTCTTC 1 cut(s) 1600
Sau96I GGNCC 6 cut(s) 102, 2619, 3398, 3608, 3875, 4196
SchI GAGTC 9 cut(s) 64, 1052, 1089, 1858, 1883, 2111, 2215, 2759, 3251
ScrFI CCNGG 7 cut(s) 1082, 1210, 2107, 2418, 2871, 3120, 4194
SduI GDGCHC 6 cut(s) 1643, 1839, 2354, 2656, 2884, 4303
SexAI ACCWGGT 1 cut(s) 2869
SfcI CTRYAG 5 cut(s) 204, 1770, 1950, 3003, 3745
Sfr274I CTCGAG 1 cut(s) 3879
Sfr303I CCGCGG 1 cut(s) 2166
SgrBI CCGCGG 1 cut(s) 2166
SinI GGWCC 3 cut(s) 2619, 3608, 4196
SlaI CTCGAG 1 cut(s) 3879
SmiMI CAYNNNNRTG 2 cut(s) 1191, 3798
SmlI CTYRAG 3 cut(s) 1119, 2927, 3879
SmoI CTYRAG 3 cut(s) 1119, 2927, 3879
SpeI ACTAGT 3 cut(s) 224, 3752, 3766
SseBI AGGCCT 2 cut(s) 4183, 4345
SspI AATATT 1 cut(s) 1654
SstI GAGCTC 1 cut(s) 4303
StuI AGGCCT 2 cut(s) 4183, 4345
StyD4I CCNGG 7 cut(s) 1080, 1208, 2105, 2416, 2869, 3118, 4192
StyI CCWWGG 3 cut(s) 78, 370, 2622
TaiI ACGT 6 cut(s) 845, 1303, 1528, 3025, 3327, 4273
TaqI TCGA 7 cut(s) 423, 1393, 2042, 2496, 2745, 3031, 3880
TatI WGTACW 3 cut(s) 820, 1682, 2148
TauI GCSGC 1 cut(s) 3280
TscAI CASTG 6 cut(s) 1648, 1839, 2401, 2906, 3442, 3934
TseFI GTSAC 5 cut(s) 89, 761, 1755, 3929, 4040
Tsp45I GTSAC 5 cut(s) 89, 761, 1755, 3929, 4040
TspGWI ACGGA 1 cut(s) 4077
TspRI CASTG 6 cut(s) 1648, 1839, 2401, 2906, 3442, 3934
Van91I CCANNNNNTGG 2 cut(s) 890, 4205
VneI GTGCAC 1 cut(s) 1835
VpaK11BI GGWCC 3 cut(s) 2619, 3608, 4196
XagI CCTNNNNNAGG 2 cut(s) 77, 1046
XapI RAATTY 3 cut(s) 1621, 2310, 2937
XbaI TCTAGA 1 cut(s) 3638
XceI RCATGY 3 cut(s) 1034, 1190, 1694
XcmI CCANNNNNNNNNTGG 1 cut(s) 1742
XhoI CTCGAG 1 cut(s) 3879
XmiI GTMKAC 4 cut(s) 16, 552, 1292, 2745
XmnI GAANNNNTTC 4 cut(s) 1365, 2050, 3174, 3831
ZraI GACGTC 1 cut(s) 3023
Zsp2I ATGCAT 1 cut(s) 3142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.