Zinc finger, PHD-type, conserved site (InterPro IPR019786), Zinc finger, PHD-type (InterPro IPR001965), Zinc finger, FYVE PHD-type (InterPro IPR011011)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G36670 AT5G36670 AT5G36670 AT5G36670 AT5G36670 AT5G36740 AT5G36740 AT5G36740 AT5G36740 AT5G36740 |
| fragaria_vesca | FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 |
| malus_domestica | MD03G1262700.v1.1 MD11G1283400.v1.1 |
| prunus_persica | Prupe.8G239000_v2.0.a1 |
| pyrus_communis | pycom03g21020 pycom11g25090 |
| rosa_chinensis | RchiOBHm_Chr6g0290741 RchiOBHm_Chr6g0290751 |
| rosa_laevigata | RLG00000012182 |
| rosa_multiflora | Rmu_co8421285.1_g000001 Rmu_sc0000043.1_g000020 |
| rosa_roxburghii | Rroxscaffold_7G00176760 |
| rosa_rugosa | Rorug06G0214400 Rorug06G0214500 Rorug06G0214600 |
| rosa_samantha | Rh6AG325000 Rh6BG332600 Rh6CG338300 Rh6DG325800 |
| rosa_wichuraiana | Rw6G028220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1320, 2511 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1291 |
| Acc36I | ACCTGC | 1 cut(s) | 2499 |
| Acc65I | GGTACC | 3 cut(s) | 334, 1911, 3341 |
| AccB1I | GGYRCC | 7 cut(s) | 334, 1911, 2001, 2054, 2230, 2977, 3341 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1921 |
| AccI | GTMKAC | 3 cut(s) | 880, 2683, 2898 |
| AccII | CGCG | 1 cut(s) | 181 |
| AciI | CCGC | 5 cut(s) | 1803, 2149, 2356, 2650, 3251 |
| AclWI | GGATC | 3 cut(s) | 1934, 1947, 3261 |
| AcsI | RAATTY | 3 cut(s) | 1849, 2042, 2084 |
| AcuI | CTGAAG | 4 cut(s) | 648, 1155, 2279, 2766 |
| AcyI | GRCGYC | 2 cut(s) | 2597, 2665 |
| AfeI | AGCGCT | 1 cut(s) | 3444 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1238, 1673, 1921, 2374, 2642 |
| AflIII | ACRYGT | 4 cut(s) | 39, 179, 1955, 2901 |
| AgeI | ACCGGT | 1 cut(s) | 3570 |
| AjnI | CCWGG | 3 cut(s) | 2057, 2233, 2890 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1092, 1124 |
| AleI | CACNNNNGTG | 3 cut(s) | 2478, 3571, 3573 |
| Alw21I | GWGCWC | 2 cut(s) | 2367, 3043 |
| Alw26I | GTCTC | 3 cut(s) | 893, 1033, 2111 |
| Alw44I | GTGCAC | 1 cut(s) | 3039 |
| AlwI | GGATC | 3 cut(s) | 1934, 1947, 3261 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 203 |
| Aor51HI | AGCGCT | 1 cut(s) | 3444 |
| AoxI | GGCC | 4 cut(s) | 443, 749, 1229, 2801 |
| ApaLI | GTGCAC | 1 cut(s) | 3039 |
| ApeKI | GCWGC | 5 cut(s) | 576, 2025, 2105, 2775, 3099 |
| ApoI | RAATTY | 3 cut(s) | 1849, 2042, 2084 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1032, 1064 |
| AsiGI | ACCGGT | 1 cut(s) | 3570 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1401 |
| Asp718I | GGTACC | 3 cut(s) | 334, 1911, 3341 |
| AspLEI | GCGC | 1 cut(s) | 3445 |
| AspS9I | GGNCC | 3 cut(s) | 929, 2801, 3168 |
| AsuHPI | GGTGA | 8 cut(s) | 101, 307, 2192, 2249, 2451, 2588, 2932, 3529 |
| AsuII | TTCGAA | 1 cut(s) | 364 |
| AvaII | GGWCC | 2 cut(s) | 929, 3168 |
| AxyI | CCTNAGG | 3 cut(s) | 339, 2328, 3021 |
| BaeGI | GKGCMC | 2 cut(s) | 2006, 3043 |
| BamHI | GGATCC | 1 cut(s) | 1939 |
| BanI | GGYRCC | 7 cut(s) | 334, 1911, 2001, 2054, 2230, 2977, 3341 |
| BanII | GRGCYC | 1 cut(s) | 2367 |
| BauI | CACGAG | 1 cut(s) | 3044 |
| BbsI | GAAGAC | 4 cut(s) | 976, 1404, 1709, 3192 |
| Bbv12I | GWGCWC | 2 cut(s) | 2367, 3043 |
| BbvCI | CCTCAGC | 2 cut(s) | 84, 3336 |
| BbvI | GCAGC | 5 cut(s) | 563, 2012, 2092, 2762, 3086 |
| BceAI | ACGGC | 4 cut(s) | 1088, 2620, 2629, 3533 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1737, 1771, 1778, 1812 |
| BciT130I | CCWGG | 3 cut(s) | 2059, 2235, 2892 |
| BciVI | GTATCC | 1 cut(s) | 2601 |
| BclI | TGATCA | 2 cut(s) | 1348, 2470 |
| BcoDI | GTCTC | 3 cut(s) | 893, 1033, 2111 |
| BfaI | CTAG | 4 cut(s) | 753, 1718, 2370, 2537 |
| BfmI | CTRYAG | 2 cut(s) | 1190, 2997 |
| BfoI | RGCGCY | 1 cut(s) | 3446 |
| BfuAI | ACCTGC | 1 cut(s) | 2499 |
| BfuI | GTATCC | 1 cut(s) | 2601 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2423 |
| BglII | AGATCT | 1 cut(s) | 1981 |
| BisI | GCNGC | 7 cut(s) | 577, 2026, 2106, 2149, 2356, 2776, 3100 |
| BlsI | GCNGC | 7 cut(s) | 578, 2027, 2107, 2150, 2357, 2777, 3101 |
| BmcAI | AGTACT | 1 cut(s) | 2248 |
| Bme1390I | CCNGG | 3 cut(s) | 2059, 2235, 2892 |
| Bme18I | GGWCC | 2 cut(s) | 929, 3168 |
| BmgT120I | GGNCC | 3 cut(s) | 929, 2801, 3168 |
| BmrFI | CCNGG | 3 cut(s) | 2059, 2235, 2892 |
| BmrI | ACTGGG | 1 cut(s) | 3083 |
| BmsI | GCATC | 4 cut(s) | 1246, 1739, 2220, 3485 |
| BmuI | ACTGGG | 1 cut(s) | 3083 |
| BoxI | GACNNNNGTC | 1 cut(s) | 934 |
| BpiI | GAAGAC | 4 cut(s) | 976, 1404, 1709, 3192 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2153, 2185 |
| BpmI | CTGGAG | 2 cut(s) | 807, 1161 |
| Bpu10I | CCTNAGC | 4 cut(s) | 84, 196, 3336, 3439 |
| Bpu14I | TTCGAA | 1 cut(s) | 364 |
| BpuEI | CTTGAG | 2 cut(s) | 629, 3137 |
| BsaAI | YACGTR | 1 cut(s) | 959 |
| BsaHI | GRCGYC | 2 cut(s) | 2597, 2665 |
| BsaI | GGTCTC | 1 cut(s) | 893 |
| BsaJI | CCNNGG | 6 cut(s) | 894, 903, 1593, 2890, 3171, 3345 |
| BsaWI | WCCGGW | 2 cut(s) | 3364, 3570 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1589, 1619 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1238, 1673, 1921, 2374, 2642 |
| Bse118I | RCCGGY | 1 cut(s) | 3570 |
| Bse1I | ACTGG | 6 cut(s) | 540, 838, 1295, 1372, 2628, 3089 |
| Bse21I | CCTNAGG | 3 cut(s) | 339, 2328, 3021 |
| Bse3DI | GCAATG | 2 cut(s) | 2586, 3467 |
| BseBI | CCWGG | 3 cut(s) | 2059, 2235, 2892 |
| BseDI | CCNNGG | 6 cut(s) | 894, 903, 1593, 2890, 3171, 3345 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1238, 1673, 1921, 2374, 2642 |
| BseMI | GCAATG | 2 cut(s) | 2586, 3467 |
| BseNI | ACTGG | 6 cut(s) | 540, 838, 1295, 1372, 2628, 3089 |
| BseRI | GAGGAG | 2 cut(s) | 356, 3038 |
| BseSI | GKGCMC | 2 cut(s) | 2006, 3043 |
| BseXI | GCAGC | 5 cut(s) | 563, 2012, 2092, 2762, 3086 |
| BseYI | CCCAGC | 1 cut(s) | 1636 |
| BsgI | GTGCAG | 1 cut(s) | 782 |
| Bsh1236I | CGCG | 1 cut(s) | 181 |
| BshFI | GGCC | 4 cut(s) | 445, 751, 1231, 2803 |
| BshNI | GGYRCC | 7 cut(s) | 334, 1911, 2001, 2054, 2230, 2977, 3341 |
| BshTI | ACCGGT | 1 cut(s) | 3570 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2367, 3043 |
| BsiSI | CCGG | 2 cut(s) | 3365, 3571 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1238, 1673, 1921, 2374, 2642 |
| BsmAI | GTCTC | 3 cut(s) | 893, 1033, 2111 |
| BsnI | GGCC | 4 cut(s) | 445, 751, 1231, 2803 |
| Bso31I | GGTCTC | 1 cut(s) | 893 |
| Bsp119I | TTCGAA | 1 cut(s) | 364 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2006, 2367, 3043 |
| Bsp1407I | TGTACA | 1 cut(s) | 2658 |
| BspACI | CCGC | 5 cut(s) | 1803, 2149, 2356, 2650, 3251 |
| BspANI | GGCC | 4 cut(s) | 445, 751, 1231, 2803 |
| BspFNI | CGCG | 1 cut(s) | 181 |
| BspMAI | CTGCAG | 1 cut(s) | 1194 |
| BspMI | ACCTGC | 1 cut(s) | 2499 |
| BspPI | GGATC | 3 cut(s) | 1934, 1947, 3261 |
| BspQI | GCTCTTC | 1 cut(s) | 3414 |
| BspT104I | TTCGAA | 1 cut(s) | 364 |
| BspT107I | GGYRCC | 7 cut(s) | 334, 1911, 2001, 2054, 2230, 2977, 3341 |
| BspTNI | GGTCTC | 1 cut(s) | 893 |
| BsrDI | GCAATG | 2 cut(s) | 2586, 3467 |
| BsrFI | RCCGGY | 1 cut(s) | 3570 |
| BsrGI | TGTACA | 1 cut(s) | 2658 |
| BsrI | ACTGG | 6 cut(s) | 540, 838, 1295, 1372, 2628, 3089 |
| BssAI | RCCGGY | 1 cut(s) | 3570 |
| BssECI | CCNNGG | 6 cut(s) | 894, 903, 1593, 2890, 3171, 3345 |
| BssNI | GRCGYC | 2 cut(s) | 2597, 2665 |
| BssSI | CACGAG | 1 cut(s) | 3044 |
| BssT1I | CCWWGG | 3 cut(s) | 894, 1593, 3345 |
| Bst2BI | CACGAG | 1 cut(s) | 3044 |
| Bst2UI | CCWGG | 3 cut(s) | 2059, 2235, 2892 |
| Bst4CI | ACNGT | 6 cut(s) | 227, 806, 1219, 2230, 3038, 3306 |
| Bst6I | CTCTTC | 8 cut(s) | 411, 714, 1031, 2154, 3117, 3171, 3228, 3414 |
| BstACI | GRCGYC | 2 cut(s) | 2597, 2665 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1695, 2088, 2414 |
| BstAUI | TGTACA | 1 cut(s) | 2658 |
| BstBAI | YACGTR | 1 cut(s) | 959 |
| BstBI | TTCGAA | 1 cut(s) | 364 |
| BstC8I | GCNNGC | 4 cut(s) | 1385, 1801, 2209, 3474 |
| BstDSI | CCRYGG | 1 cut(s) | 3171 |
| BstFNI | CGCG | 1 cut(s) | 181 |
| BstH2I | RGCGCY | 1 cut(s) | 3446 |
| BstHHI | GCGC | 1 cut(s) | 3445 |
| BstMAI | GTCTC | 3 cut(s) | 893, 1033, 2111 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1695, 1809, 2088, 2414, 2423, 3478 |
| BstNI | CCWGG | 3 cut(s) | 2059, 2235, 2892 |
| BstNSI | RCATGY | 3 cut(s) | 1959, 2211, 2905 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 934 |
| BstSCI | CCNGG | 3 cut(s) | 2057, 2233, 2890 |
| BstSFI | CTRYAG | 2 cut(s) | 1190, 2997 |
| BstSLI | GKGCMC | 2 cut(s) | 2006, 3043 |
| BstSNI | TACGTA | 1 cut(s) | 959 |
| BstUI | CGCG | 1 cut(s) | 181 |
| BstV1I | GCAGC | 5 cut(s) | 563, 2012, 2092, 2762, 3086 |
| BstV2I | GAAGAC | 4 cut(s) | 976, 1404, 1709, 3192 |
| BstX2I | RGATCY | 2 cut(s) | 1939, 1981 |
| BstYI | RGATCY | 2 cut(s) | 1939, 1981 |
| Bsu36I | CCTNAGG | 3 cut(s) | 339, 2328, 3021 |
| BsuI | GTATCC | 1 cut(s) | 2601 |
| BsuRI | GGCC | 4 cut(s) | 445, 751, 1231, 2803 |
| BtgI | CCRYGG | 1 cut(s) | 3171 |
| BtgZI | GCGATG | 2 cut(s) | 558, 3462 |
| BtsI | GCAGTG | 3 cut(s) | 1868, 2321, 2556 |
| BveI | ACCTGC | 1 cut(s) | 2499 |
| Cac8I | GCNNGC | 4 cut(s) | 1385, 1801, 2209, 3474 |
| CaiI | CAGNNNCTG | 1 cut(s) | 203 |
| CfoI | GCGC | 1 cut(s) | 3445 |
| Cfr10I | RCCGGY | 1 cut(s) | 3570 |
| Cfr13I | GGNCC | 3 cut(s) | 929, 2801, 3168 |
| CseI | GACGC | 2 cut(s) | 2586, 2654 |
| CspAI | ACCGGT | 1 cut(s) | 3570 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3482, 3517 |
| DraI | TTTAAA | 1 cut(s) | 36 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1291 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1291 |
| Eam1104I | CTCTTC | 8 cut(s) | 411, 714, 1031, 2154, 3117, 3171, 3228, 3414 |
| EarI | CTCTTC | 8 cut(s) | 411, 714, 1031, 2154, 3117, 3171, 3228, 3414 |
| Ecl136II | GAGCTC | 1 cut(s) | 2365 |
| Eco105I | TACGTA | 1 cut(s) | 959 |
| Eco130I | CCWWGG | 3 cut(s) | 894, 1593, 3345 |
| Eco147I | AGGCCT | 3 cut(s) | 445, 751, 1231 |
| Eco24I | GRGCYC | 1 cut(s) | 2367 |
| Eco31I | GGTCTC | 1 cut(s) | 893 |
| Eco47I | GGWCC | 2 cut(s) | 929, 3168 |
| Eco47III | AGCGCT | 1 cut(s) | 3444 |
| Eco53kI | GAGCTC | 1 cut(s) | 2365 |
| Eco57I | CTGAAG | 4 cut(s) | 648, 1155, 2279, 2766 |
| Eco81I | CCTNAGG | 3 cut(s) | 339, 2328, 3021 |
| EcoICRI | GAGCTC | 1 cut(s) | 2365 |
| EcoO109I | RGGNCCY | 1 cut(s) | 929 |
| EcoRI | GAATTC | 1 cut(s) | 1849 |
| EcoRII | CCWGG | 3 cut(s) | 2057, 2233, 2890 |
| EcoT14I | CCWWGG | 3 cut(s) | 894, 1593, 3345 |
| EcoT22I | ATGCAT | 1 cut(s) | 2213 |
| EcoT38I | GRGCYC | 1 cut(s) | 2367 |
| ErhI | CCWWGG | 3 cut(s) | 894, 1593, 3345 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 591, 623, 627, 659, 1386, 1418 |
| FauI | CCCGC | 2 cut(s) | 1796, 2657 |
| FbaI | TGATCA | 2 cut(s) | 1348, 2470 |
| FblI | GTMKAC | 3 cut(s) | 880, 2683, 2898 |
| Fnu4HI | GCNGC | 7 cut(s) | 577, 2026, 2106, 2149, 2356, 2776, 3100 |
| FriOI | GRGCYC | 1 cut(s) | 2367 |
| Fsp4HI | GCNGC | 7 cut(s) | 577, 2026, 2106, 2149, 2356, 2776, 3100 |
| FspBI | CTAG | 4 cut(s) | 753, 1718, 2370, 2537 |
| GlaI | GCGC | 1 cut(s) | 3444 |
| GluI | GCNGC | 7 cut(s) | 577, 2026, 2106, 2149, 2356, 2776, 3100 |
| GsaI | CCCAGC | 1 cut(s) | 1640 |
| GsuI | CTGGAG | 2 cut(s) | 807, 1161 |
| HaeII | RGCGCY | 1 cut(s) | 3446 |
| HaeIII | GGCC | 4 cut(s) | 445, 751, 1231, 2803 |
| HapII | CCGG | 2 cut(s) | 3365, 3571 |
| HgaI | GACGC | 2 cut(s) | 2586, 2654 |
| HhaI | GCGC | 1 cut(s) | 3445 |
| Hin1I | GRCGYC | 2 cut(s) | 2597, 2665 |
| Hin6I | GCGC | 1 cut(s) | 3443 |
| HinP1I | GCGC | 1 cut(s) | 3443 |
| HincII | GTYRAC | 4 cut(s) | 850, 2488, 2684, 3111 |
| HindII | GTYRAC | 4 cut(s) | 850, 2488, 2684, 3111 |
| HpaI | GTTAAC | 1 cut(s) | 3111 |
| HpaII | CCGG | 2 cut(s) | 3365, 3571 |
| HphI | GGTGA | 8 cut(s) | 101, 307, 2192, 2249, 2451, 2588, 2932, 3529 |
| Hpy188III | TCNNGA | 8 cut(s) | 824, 1152, 1253, 1274, 1718, 1781, 2276, 3227 |
| Hpy99I | CGWCG | 3 cut(s) | 2685, 2714, 2801 |
| HpyCH4III | ACNGT | 6 cut(s) | 227, 806, 1219, 2230, 3038, 3306 |
| HpyCH4IV | ACGT | 4 cut(s) | 39, 430, 736, 958 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1695, 1809, 2088, 2414, 2423, 3478 |
| HpySE526I | ACGT | 4 cut(s) | 39, 430, 736, 958 |
| Hsp92I | GRCGYC | 2 cut(s) | 2597, 2665 |
| HspAI | GCGC | 1 cut(s) | 3443 |
| KpnI | GGTACC | 3 cut(s) | 338, 1915, 3345 |
| Ksp22I | TGATCA | 2 cut(s) | 1348, 2470 |
| KspAI | GTTAAC | 1 cut(s) | 3111 |
| LguI | GCTCTTC | 1 cut(s) | 3414 |
| LmnI | GCTCC | 2 cut(s) | 1437, 2370 |
| Lsp1109I | GCAGC | 5 cut(s) | 563, 2012, 2092, 2762, 3086 |
| LweI | GCATC | 4 cut(s) | 1246, 1739, 2220, 3485 |
| MaeI | CTAG | 4 cut(s) | 753, 1718, 2370, 2537 |
| MaeII | ACGT | 4 cut(s) | 39, 430, 736, 958 |
| MaeIII | GTNAC | 9 cut(s) | 1068, 1178, 1194, 1297, 2066, 2387, 3156, 3371, 3457 |
| MfeI | CAATTG | 2 cut(s) | 51, 1328 |
| MflI | RGATCY | 2 cut(s) | 1939, 1981 |
| MhlI | GDGCHC | 3 cut(s) | 2006, 2367, 3043 |
| MluI | ACGCGT | 1 cut(s) | 179 |
| MmeI | TCCRAC | 3 cut(s) | 1001, 1193, 1622 |
| Mph1103I | ATGCAT | 1 cut(s) | 2213 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1401 |
| MslI | CAYNNNNRTG | 4 cut(s) | 2478, 2591, 3571, 3573 |
| MspI | CCGG | 2 cut(s) | 3365, 3571 |
| MspR9I | CCNGG | 3 cut(s) | 2059, 2235, 2892 |
| MunI | CAATTG | 2 cut(s) | 51, 1328 |
| MvaI | CCWGG | 3 cut(s) | 2059, 2235, 2892 |
| MvnI | CGCG | 1 cut(s) | 181 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1695, 1809, 2088, 2414, 2423, 3478 |
| NmuCI | GTSAC | 5 cut(s) | 1068, 1178, 1297, 2387, 3457 |
| NsiI | ATGCAT | 1 cut(s) | 2213 |
| NspI | RCATGY | 3 cut(s) | 1959, 2211, 2905 |
| NspV | TTCGAA | 1 cut(s) | 364 |
| OliI | CACNNNNGTG | 3 cut(s) | 2478, 3571, 3573 |
| PaeI | GCATGC | 1 cut(s) | 2211 |
| PceI | AGGCCT | 3 cut(s) | 445, 751, 1231 |
| PciI | ACATGT | 2 cut(s) | 1955, 2901 |
| PciSI | GCTCTTC | 1 cut(s) | 3414 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1401 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1921 |
| PinAI | ACCGGT | 1 cut(s) | 3570 |
| PkrI | GCNGC | 7 cut(s) | 578, 2027, 2107, 2150, 2357, 2777, 3101 |
| Ppu21I | YACGTR | 1 cut(s) | 959 |
| PpuMI | RGGWCCY | 1 cut(s) | 929 |
| PscI | ACATGT | 2 cut(s) | 1955, 2901 |
| PshAI | GACNNNNGTC | 1 cut(s) | 934 |
| PsiI | TTATAA | 2 cut(s) | 1320, 2511 |
| Psp124BI | GAGCTC | 1 cut(s) | 2367 |
| Psp5II | RGGWCCY | 1 cut(s) | 929 |
| Psp6I | CCWGG | 3 cut(s) | 2057, 2233, 2890 |
| PspFI | CCCAGC | 1 cut(s) | 1636 |
| PspGI | CCWGG | 3 cut(s) | 2057, 2233, 2890 |
| PspPI | GGNCC | 3 cut(s) | 929, 2801, 3168 |
| PspPPI | RGGWCCY | 1 cut(s) | 929 |
| PstI | CTGCAG | 1 cut(s) | 1194 |
| PstNI | CAGNNNCTG | 1 cut(s) | 203 |
| PsuI | RGATCY | 2 cut(s) | 1939, 1981 |
| RseI | CAYNNNNRTG | 4 cut(s) | 2478, 2591, 3571, 3573 |
| SacI | GAGCTC | 1 cut(s) | 2367 |
| SalI | GTCGAC | 1 cut(s) | 2682 |
| SapI | GCTCTTC | 1 cut(s) | 3414 |
| SatI | GCNGC | 7 cut(s) | 577, 2026, 2106, 2149, 2356, 2776, 3100 |
| Sau96I | GGNCC | 3 cut(s) | 929, 2801, 3168 |
| ScaI | AGTACT | 1 cut(s) | 2248 |
| ScrFI | CCNGG | 3 cut(s) | 2059, 2235, 2892 |
| SduI | GDGCHC | 3 cut(s) | 2006, 2367, 3043 |
| SfaNI | GCATC | 4 cut(s) | 1246, 1739, 2220, 3485 |
| SfcI | CTRYAG | 2 cut(s) | 1190, 2997 |
| SfuI | TTCGAA | 1 cut(s) | 364 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3570 |
| SinI | GGWCC | 2 cut(s) | 929, 3168 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 2478, 2591, 3571, 3573 |
| SmlI | CTYRAG | 2 cut(s) | 608, 3152 |
| SmoI | CTYRAG | 2 cut(s) | 608, 3152 |
| SnaBI | TACGTA | 1 cut(s) | 959 |
| SphI | GCATGC | 1 cut(s) | 2211 |
| SseBI | AGGCCT | 3 cut(s) | 445, 751, 1231 |
| SsiI | CCGC | 5 cut(s) | 1803, 2149, 2356, 2650, 3251 |
| SspMI | CTAG | 4 cut(s) | 753, 1718, 2370, 2537 |
| SstI | GAGCTC | 1 cut(s) | 2367 |
| StuI | AGGCCT | 3 cut(s) | 445, 751, 1231 |
| StyD4I | CCNGG | 3 cut(s) | 2057, 2233, 2890 |
| StyI | CCWWGG | 3 cut(s) | 894, 1593, 3345 |
| TaaI | ACNGT | 6 cut(s) | 227, 806, 1219, 2230, 3038, 3306 |
| TaiI | ACGT | 4 cut(s) | 42, 433, 739, 961 |
| TatI | WGTACW | 3 cut(s) | 1553, 2246, 2658 |
| TauI | GCSGC | 2 cut(s) | 2151, 2358 |
| TseFI | GTSAC | 5 cut(s) | 1068, 1178, 1297, 2387, 3457 |
| TseI | GCWGC | 5 cut(s) | 576, 2025, 2105, 2775, 3099 |
| Tsp45I | GTSAC | 5 cut(s) | 1068, 1178, 1297, 2387, 3457 |
| TspGWI | ACGGA | 5 cut(s) | 1050, 1135, 1548, 1689, 3160 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1921 |
| VneI | GTGCAC | 1 cut(s) | 3039 |
| VpaK11BI | GGWCC | 2 cut(s) | 929, 3168 |
| XapI | RAATTY | 3 cut(s) | 1849, 2042, 2084 |
| XbaI | TCTAGA | 1 cut(s) | 1717 |
| XceI | RCATGY | 3 cut(s) | 1959, 2211, 2905 |
| XmiI | GTMKAC | 3 cut(s) | 880, 2683, 2898 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1401 |
| XspI | CTAG | 4 cut(s) | 753, 1718, 2370, 2537 |
| ZrmI | AGTACT | 1 cut(s) | 2248 |
| Zsp2I | ATGCAT | 1 cut(s) | 2213 |