TPL-binding domain in jasmonate signalling
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G36670 AT5G36670 AT5G36670 AT5G36670 AT5G36670 AT5G36740 AT5G36740 AT5G36740 AT5G36740 AT5G36740 |
| fragaria_vesca | FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 |
| malus_domestica | MD03G1262700.v1.1 MD11G1283400.v1.1 |
| prunus_persica | Prupe.8G239000_v2.0.a1 |
| pyrus_communis | pycom03g21020 pycom11g25090 |
| rosa_chinensis | RchiOBHm_Chr6g0290741 RchiOBHm_Chr6g0290751 |
| rosa_laevigata | RLG00000012182 |
| rosa_multiflora | Rmu_co8421285.1_g000001 Rmu_sc0000043.1_g000020 |
| rosa_roxburghii | Rroxscaffold_7G00176760 |
| rosa_rugosa | Rorug06G0214400 Rorug06G0214500 Rorug06G0214600 |
| rosa_samantha | Rh6AG325000 Rh6BG332600 Rh6CG338300 Rh6DG325800 |
| rosa_wichuraiana | Rw6G028220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1777 |
| Acc16I | TGCGCA | 1 cut(s) | 2863 |
| Acc36I | ACCTGC | 3 cut(s) | 2783, 3355, 4552 |
| AccB1I | GGYRCC | 1 cut(s) | 4220 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 209, 1013, 2234 |
| AccBSI | CCGCTC | 1 cut(s) | 711 |
| AccI | GTMKAC | 2 cut(s) | 2685, 4953 |
| AccII | CGCG | 1 cut(s) | 370 |
| AclI | AACGTT | 2 cut(s) | 2518, 4464 |
| AclWI | GGATC | 6 cut(s) | 1155, 1823, 2585, 3091, 3895, 4579 |
| AcoI | YGGCCR | 1 cut(s) | 550 |
| AcuI | CTGAAG | 5 cut(s) | 3600, 4077, 4299, 4680, 5067 |
| AcyI | GRCGYC | 1 cut(s) | 3268 |
| AdeI | CACNNNGTG | 1 cut(s) | 3626 |
| AfaI | GTAC | 8 cut(s) | 1394, 1444, 2101, 2250, 2303, 4285, 4327, 4411 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 103, 209, 1013, 2234, 3245, 3518, 4898, 5113 |
| AflIII | ACRYGT | 2 cut(s) | 2570, 5048 |
| AgeI | ACCGGT | 1 cut(s) | 1273 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2461 |
| AjnI | CCWGG | 7 cut(s) | 1464, 2255, 3451, 4743, 4945, 5106, 5112 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 269, 301 |
| AleI | CACNNNNGTG | 1 cut(s) | 3081 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 4973, 5005 |
| Alw21I | GWGCWC | 1 cut(s) | 1078 |
| Alw26I | GTCTC | 6 cut(s) | 143, 1113, 1189, 1264, 4598, 4867 |
| AlwI | GGATC | 6 cut(s) | 1155, 1823, 2585, 3091, 3895, 4579 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1013, 2459, 3896, 4190 |
| Ama87I | CYCGRG | 2 cut(s) | 3539, 5038 |
| AoxI | GGCC | 3 cut(s) | 550, 1503, 5110 |
| ApeKI | GCWGC | 8 cut(s) | 1691, 2329, 3653, 4748, 4751, 4804, 4815, 4996 |
| AsiGI | ACCGGT | 1 cut(s) | 1273 |
| AspLEI | GCGC | 3 cut(s) | 790, 2864, 4973 |
| AspS9I | GGNCC | 6 cut(s) | 125, 2128, 4028, 4531, 5078, 5110 |
| AsuC2I | CCSGG | 1 cut(s) | 554 |
| AvaI | CYCGRG | 2 cut(s) | 3539, 5038 |
| AvaII | GGWCC | 5 cut(s) | 125, 2128, 4028, 4531, 5078 |
| BaeGI | GKGCMC | 1 cut(s) | 4223 |
| BanI | GGYRCC | 1 cut(s) | 4220 |
| BauI | CACGAG | 1 cut(s) | 3693 |
| BbsI | GAAGAC | 4 cut(s) | 272, 2156, 2457, 2559 |
| Bbv12I | GWGCWC | 1 cut(s) | 1078 |
| BbvCI | CCTCAGC | 2 cut(s) | 3870, 3897 |
| BbvI | GCAGC | 8 cut(s) | 1678, 2316, 3640, 4735, 4738, 4791, 4827, 5008 |
| BceAI | ACGGC | 1 cut(s) | 3223 |
| BciT130I | CCWGG | 7 cut(s) | 1466, 2257, 3453, 4745, 4947, 5108, 5114 |
| BclI | TGATCA | 1 cut(s) | 136 |
| BcnI | CCSGG | 1 cut(s) | 554 |
| BcoDI | GTCTC | 6 cut(s) | 143, 1113, 1189, 1264, 4598, 4867 |
| BfaI | CTAG | 4 cut(s) | 3170, 3227, 4698, 5118 |
| BfmI | CTRYAG | 7 cut(s) | 1692, 1892, 4158, 4296, 4433, 4559, 4650 |
| BfoI | RGCGCY | 1 cut(s) | 4974 |
| BfuAI | ACCTGC | 3 cut(s) | 2783, 3355, 4552 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3026 |
| BglII | AGATCT | 2 cut(s) | 17, 1334 |
| BmcAI | AGTACT | 1 cut(s) | 2250 |
| Bme1390I | CCNGG | 8 cut(s) | 554, 1466, 2257, 3453, 4745, 4947, 5108, 5114 |
| Bme18I | GGWCC | 5 cut(s) | 125, 2128, 4028, 4531, 5078 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2461 |
| BmeT110I | CYCGRG | 2 cut(s) | 3539, 5038 |
| BmgT120I | GGNCC | 6 cut(s) | 125, 2128, 4028, 4531, 5078, 5110 |
| BmiI | GGNNCC | 4 cut(s) | 2275, 3250, 4222, 4532 |
| BmrFI | CCNGG | 8 cut(s) | 554, 1466, 2257, 3453, 4745, 4947, 5108, 5114 |
| BmrI | ACTGGG | 3 cut(s) | 162, 279, 2054 |
| BmuI | ACTGGG | 3 cut(s) | 162, 279, 2054 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2616 |
| BpiI | GAAGAC | 4 cut(s) | 272, 2156, 2457, 2559 |
| BpmI | CTGGAG | 4 cut(s) | 990, 2915, 3725, 4854 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3870, 3897 |
| BpuEI | CTTGAG | 5 cut(s) | 521, 1497, 2099, 2354, 4622 |
| BpuMI | CCSGG | 1 cut(s) | 554 |
| BsaAI | YACGTR | 1 cut(s) | 1643 |
| BsaBI | GATNNNNATC | 2 cut(s) | 4272, 4593 |
| BsaHI | GRCGYC | 1 cut(s) | 3268 |
| BsaI | GGTCTC | 2 cut(s) | 1189, 1264 |
| BsaJI | CCNNGG | 6 cut(s) | 1203, 1788, 3214, 3451, 4945, 5107 |
| BsaWI | WCCGGW | 2 cut(s) | 127, 1273 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 324, 354, 1219, 1249 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 103, 209, 1013, 2234, 3245, 3518, 4898, 5113 |
| Bse118I | RCCGGY | 3 cut(s) | 1273, 3285, 4727 |
| Bse3DI | GCAATG | 3 cut(s) | 2483, 3022, 4843 |
| Bse8I | GATNNNNATC | 2 cut(s) | 4272, 4593 |
| BseBI | CCWGG | 7 cut(s) | 1466, 2257, 3453, 4745, 4947, 5108, 5114 |
| BseDI | CCNNGG | 6 cut(s) | 1203, 1788, 3214, 3451, 4945, 5107 |
| BseJI | GATNNNNATC | 2 cut(s) | 4272, 4593 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 103, 209, 1013, 2234, 3245, 3518, 4898, 5113 |
| BseMI | GCAATG | 3 cut(s) | 2483, 3022, 4843 |
| BseRI | GAGGAG | 2 cut(s) | 295, 2607 |
| BseSI | GKGCMC | 1 cut(s) | 4223 |
| BseXI | GCAGC | 8 cut(s) | 1678, 2316, 3640, 4735, 4738, 4791, 4827, 5008 |
| BsgI | GTGCAG | 1 cut(s) | 3603 |
| Bsh1236I | CGCG | 1 cut(s) | 370 |
| Bsh1285I | CGRYCG | 2 cut(s) | 368, 1707 |
| BshFI | GGCC | 3 cut(s) | 552, 1505, 5112 |
| BshNI | GGYRCC | 1 cut(s) | 4220 |
| BshTI | ACCGGT | 1 cut(s) | 1273 |
| BsiEI | CGRYCG | 2 cut(s) | 368, 1707 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1078 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3539, 5038 |
| BsiSI | CCGG | 6 cut(s) | 128, 553, 1274, 3286, 3848, 4728 |
| BslFI | GGGAC | 5 cut(s) | 2750, 3382, 3600, 4544, 4928 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 103, 209, 1013, 2234, 3245, 3518, 4898, 5113 |
| BsmAI | GTCTC | 6 cut(s) | 143, 1113, 1189, 1264, 4598, 4867 |
| BsmFI | GGGAC | 5 cut(s) | 2750, 3382, 3600, 4544, 4928 |
| BsmI | GAATGC | 3 cut(s) | 550, 3017, 3788 |
| BsnI | GGCC | 3 cut(s) | 552, 1505, 5112 |
| Bso31I | GGTCTC | 2 cut(s) | 1189, 1264 |
| BsoBI | CYCGRG | 2 cut(s) | 3539, 5038 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1078, 4223 |
| Bsp19I | CCATGG | 1 cut(s) | 3214 |
| BspANI | GGCC | 3 cut(s) | 552, 1505, 5112 |
| BspFNI | CGCG | 1 cut(s) | 370 |
| BspHI | TCATGA | 7 cut(s) | 4045, 4087, 4147, 4453, 4519, 4543, 4762 |
| BspLI | GGNNCC | 4 cut(s) | 2275, 3250, 4222, 4532 |
| BspMAI | CTGCAG | 3 cut(s) | 1696, 4437, 4563 |
| BspMI | ACCTGC | 3 cut(s) | 2783, 3355, 4552 |
| BspPI | GGATC | 6 cut(s) | 1155, 1823, 2585, 3091, 3895, 4579 |
| BspT107I | GGYRCC | 1 cut(s) | 4220 |
| BspTNI | GGTCTC | 2 cut(s) | 1189, 1264 |
| BsrBI | CCGCTC | 1 cut(s) | 711 |
| BsrDI | GCAATG | 3 cut(s) | 2483, 3022, 4843 |
| BsrFI | RCCGGY | 3 cut(s) | 1273, 3285, 4727 |
| BssAI | RCCGGY | 3 cut(s) | 1273, 3285, 4727 |
| BssECI | CCNNGG | 6 cut(s) | 1203, 1788, 3214, 3451, 4945, 5107 |
| BssNAI | GTATAC | 1 cut(s) | 2686 |
| BssNI | GRCGYC | 1 cut(s) | 3268 |
| BssSI | CACGAG | 1 cut(s) | 3693 |
| BssT1I | CCWWGG | 3 cut(s) | 1203, 1788, 3214 |
| Bst1107I | GTATAC | 1 cut(s) | 2686 |
| Bst2BI | CACGAG | 1 cut(s) | 3693 |
| Bst2UI | CCWGG | 7 cut(s) | 1466, 2257, 3453, 4745, 4947, 5108, 5114 |
| BstACI | GRCGYC | 1 cut(s) | 3268 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2482, 2825, 4824 |
| BstBAI | YACGTR | 1 cut(s) | 1643 |
| BstC8I | GCNNGC | 7 cut(s) | 550, 1696, 2107, 2483, 3287, 3416, 3651 |
| BstDSI | CCRYGG | 1 cut(s) | 3214 |
| BstEII | GGTNACC | 1 cut(s) | 3829 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3516 |
| BstFNI | CGCG | 1 cut(s) | 370 |
| BstH2I | RGCGCY | 1 cut(s) | 4974 |
| BstHHI | GCGC | 3 cut(s) | 790, 2864, 4973 |
| BstMAI | GTCTC | 6 cut(s) | 143, 1113, 1189, 1264, 4598, 4867 |
| BstMCI | CGRYCG | 2 cut(s) | 368, 1707 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 1010, 1799, 2140, 2482, 2825, 3026, 3803, 4824, 4833 |
| BstNI | CCWGG | 7 cut(s) | 1466, 2257, 3453, 4745, 4947, 5108, 5114 |
| BstNSI | RCATGY | 5 cut(s) | 1891, 2109, 2574, 4246, 5052 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2616 |
| BstPI | GGTNACC | 1 cut(s) | 3829 |
| BstSCI | CCNGG | 8 cut(s) | 552, 1464, 2255, 3451, 4743, 4945, 5106, 5112 |
| BstSFI | CTRYAG | 7 cut(s) | 1692, 1892, 4158, 4296, 4433, 4559, 4650 |
| BstSLI | GKGCMC | 1 cut(s) | 4223 |
| BstUI | CGCG | 1 cut(s) | 370 |
| BstV1I | GCAGC | 8 cut(s) | 1678, 2316, 3640, 4735, 4738, 4791, 4827, 5008 |
| BstV2I | GAAGAC | 4 cut(s) | 272, 2156, 2457, 2559 |
| BstX2I | RGATCY | 4 cut(s) | 17, 1334, 2577, 4571 |
| BstYI | RGATCY | 4 cut(s) | 17, 1334, 2577, 4571 |
| BstZ17I | GTATAC | 1 cut(s) | 2686 |
| BsuRI | GGCC | 3 cut(s) | 552, 1505, 5112 |
| BtgI | CCRYGG | 1 cut(s) | 3214 |
| BtgZI | GCGATG | 1 cut(s) | 2182 |
| BtsI | GCAGTG | 3 cut(s) | 1665, 1752, 3159 |
| BveI | ACCTGC | 3 cut(s) | 2783, 3355, 4552 |
| Cac8I | GCNNGC | 7 cut(s) | 550, 1696, 2107, 2483, 3287, 3416, 3651 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1013, 2459, 3896, 4190 |
| CciI | TCATGA | 7 cut(s) | 4045, 4087, 4147, 4453, 4519, 4543, 4762 |
| CfoI | GCGC | 3 cut(s) | 790, 2864, 4973 |
| Cfr10I | RCCGGY | 3 cut(s) | 1273, 3285, 4727 |
| Cfr13I | GGNCC | 6 cut(s) | 125, 2128, 4028, 4531, 5078, 5110 |
| CseI | GACGC | 3 cut(s) | 2123, 2748, 3257 |
| Csp6I | GTAC | 8 cut(s) | 1393, 1443, 2100, 2249, 2302, 4284, 4326, 4410 |
| CspAI | ACCGGT | 1 cut(s) | 1273 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2686, 2721 |
| CviQI | GTAC | 8 cut(s) | 1393, 1443, 2100, 2249, 2302, 4284, 4326, 4410 |
| DraI | TTTAAA | 2 cut(s) | 1807, 3916 |
| DraIII | CACNNNGTG | 1 cut(s) | 3626 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1777 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2461 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1777 |
| EaeI | YGGCCR | 1 cut(s) | 550 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2461 |
| EciI | GGCGGA | 6 cut(s) | 614, 635, 656, 677, 719, 740 |
| Eco130I | CCWWGG | 3 cut(s) | 1203, 1788, 3214 |
| Eco147I | AGGCCT | 1 cut(s) | 1505 |
| Eco31I | GGTCTC | 2 cut(s) | 1189, 1264 |
| Eco32I | GATATC | 2 cut(s) | 3463, 4515 |
| Eco47I | GGWCC | 5 cut(s) | 125, 2128, 4028, 4531, 5078 |
| Eco57I | CTGAAG | 5 cut(s) | 3600, 4077, 4299, 4680, 5067 |
| Eco88I | CYCGRG | 2 cut(s) | 3539, 5038 |
| Eco91I | GGTNACC | 1 cut(s) | 3829 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3516 |
| EcoO65I | GGTNACC | 1 cut(s) | 3829 |
| EcoRI | GAATTC | 3 cut(s) | 2358, 4701, 4924 |
| EcoRII | CCWGG | 7 cut(s) | 1464, 2255, 3451, 4743, 4945, 5106, 5112 |
| EcoRV | GATATC | 2 cut(s) | 3463, 4515 |
| EcoT14I | CCWWGG | 3 cut(s) | 1203, 1788, 3214 |
| EcoT22I | ATGCAT | 1 cut(s) | 2092 |
| ErhI | CCWWGG | 3 cut(s) | 1203, 1788, 3214 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1356, 1388, 2316, 2348 |
| FaqI | GGGAC | 5 cut(s) | 2750, 3382, 3600, 4544, 4928 |
| FauI | CCCGC | 1 cut(s) | 3260 |
| FauNDI | CATATG | 3 cut(s) | 2230, 4387, 4977 |
| FbaI | TGATCA | 1 cut(s) | 136 |
| FblI | GTMKAC | 2 cut(s) | 2685, 4953 |
| FspBI | CTAG | 4 cut(s) | 3170, 3227, 4698, 5118 |
| FspI | TGCGCA | 1 cut(s) | 2863 |
| GlaI | GCGC | 3 cut(s) | 789, 2863, 4972 |
| GsuI | CTGGAG | 4 cut(s) | 990, 2915, 3725, 4854 |
| HaeII | RGCGCY | 1 cut(s) | 4974 |
| HaeIII | GGCC | 3 cut(s) | 552, 1505, 5112 |
| HapII | CCGG | 6 cut(s) | 128, 553, 1274, 3286, 3848, 4728 |
| HgaI | GACGC | 3 cut(s) | 2123, 2748, 3257 |
| HhaI | GCGC | 3 cut(s) | 790, 2864, 4973 |
| Hin1I | GRCGYC | 1 cut(s) | 3268 |
| Hin6I | GCGC | 3 cut(s) | 788, 2862, 4971 |
| HinP1I | GCGC | 3 cut(s) | 788, 2862, 4971 |
| HincII | GTYRAC | 4 cut(s) | 2266, 3073, 3492, 4758 |
| HindII | GTYRAC | 4 cut(s) | 2266, 3073, 3492, 4758 |
| HpaI | GTTAAC | 1 cut(s) | 3492 |
| HpaII | CCGG | 6 cut(s) | 128, 553, 1274, 3286, 3848, 4728 |
| HpyCH4IV | ACGT | 5 cut(s) | 1642, 2518, 3371, 3589, 4464 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 1010, 1799, 2140, 2482, 2825, 3026, 3803, 4824, 4833 |
| HpySE526I | ACGT | 5 cut(s) | 1642, 2518, 3371, 3589, 4464 |
| Hsp92I | GRCGYC | 1 cut(s) | 3268 |
| HspAI | GCGC | 3 cut(s) | 788, 2862, 4971 |
| KroI | GCCGGC | 1 cut(s) | 3285 |
| KroNI | GCCGGC | 1 cut(s) | 3287 |
| Ksp22I | TGATCA | 1 cut(s) | 136 |
| KspAI | GTTAAC | 1 cut(s) | 3492 |
| LmnI | GCTCC | 2 cut(s) | 1009, 3850 |
| Lsp1109I | GCAGC | 8 cut(s) | 1678, 2316, 3640, 4735, 4738, 4791, 4827, 5008 |
| MaeI | CTAG | 4 cut(s) | 3170, 3227, 4698, 5118 |
| MaeII | ACGT | 5 cut(s) | 1642, 2518, 3371, 3589, 4464 |
| MbiI | CCGCTC | 1 cut(s) | 711 |
| MfeI | CAATTG | 1 cut(s) | 204 |
| MflI | RGATCY | 4 cut(s) | 17, 1334, 2577, 4571 |
| MhlI | GDGCHC | 2 cut(s) | 1078, 4223 |
| MmeI | TCCRAC | 2 cut(s) | 3690, 4716 |
| Mph1103I | ATGCAT | 1 cut(s) | 2092 |
| MroNI | GCCGGC | 1 cut(s) | 3285 |
| MslI | CAYNNNNRTG | 4 cut(s) | 144, 2784, 3081, 3987 |
| MspA1I | CMGCKG | 1 cut(s) | 4874 |
| MspI | CCGG | 6 cut(s) | 128, 553, 1274, 3286, 3848, 4728 |
| MspR9I | CCNGG | 8 cut(s) | 554, 1466, 2257, 3453, 4745, 4947, 5108, 5114 |
| MunI | CAATTG | 1 cut(s) | 204 |
| Mva1269I | GAATGC | 3 cut(s) | 550, 3017, 3788 |
| MvaI | CCWGG | 7 cut(s) | 1466, 2257, 3453, 4745, 4947, 5108, 5114 |
| MvnI | CGCG | 1 cut(s) | 370 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 1010, 1799, 2140, 2482, 2825, 3026, 3803, 4824, 4833 |
| NaeI | GCCGGC | 1 cut(s) | 3287 |
| NciI | CCSGG | 1 cut(s) | 554 |
| NcoI | CCATGG | 1 cut(s) | 3214 |
| NdeI | CATATG | 3 cut(s) | 2230, 4387, 4977 |
| NgoMIV | GCCGGC | 1 cut(s) | 3285 |
| NlaIV | GGNNCC | 4 cut(s) | 2275, 3250, 4222, 4532 |
| NsbI | TGCGCA | 1 cut(s) | 2863 |
| NsiI | ATGCAT | 1 cut(s) | 2092 |
| NspI | RCATGY | 5 cut(s) | 1891, 2109, 2574, 4246, 5052 |
| OliI | CACNNNNGTG | 1 cut(s) | 3081 |
| PaeI | GCATGC | 1 cut(s) | 2109 |
| PaeR7I | CTCGAG | 2 cut(s) | 3539, 5038 |
| PagI | TCATGA | 7 cut(s) | 4045, 4087, 4147, 4453, 4519, 4543, 4762 |
| PceI | AGGCCT | 1 cut(s) | 1505 |
| PciI | ACATGT | 2 cut(s) | 2570, 5048 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3595 |
| PctI | GAATGC | 3 cut(s) | 550, 3017, 3788 |
| PdiI | GCCGGC | 1 cut(s) | 3287 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 209, 1013, 2234 |
| PinAI | ACCGGT | 1 cut(s) | 1273 |
| Ppu21I | YACGTR | 1 cut(s) | 1643 |
| PscI | ACATGT | 2 cut(s) | 2570, 5048 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2616 |
| Psp1406I | AACGTT | 2 cut(s) | 2518, 4464 |
| Psp6I | CCWGG | 7 cut(s) | 1464, 2255, 3451, 4743, 4945, 5106, 5112 |
| PspEI | GGTNACC | 1 cut(s) | 3829 |
| PspGI | CCWGG | 7 cut(s) | 1464, 2255, 3451, 4743, 4945, 5106, 5112 |
| PspN4I | GGNNCC | 4 cut(s) | 2275, 3250, 4222, 4532 |
| PspPI | GGNCC | 6 cut(s) | 125, 2128, 4028, 4531, 5078, 5110 |
| PspXI | VCTCGAGB | 1 cut(s) | 5038 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4434, 4466 |
| PstI | CTGCAG | 3 cut(s) | 1696, 4437, 4563 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1013, 2459, 3896, 4190 |
| PsuI | RGATCY | 4 cut(s) | 17, 1334, 2577, 4571 |
| PvuII | CAGCTG | 1 cut(s) | 4874 |
| RsaI | GTAC | 8 cut(s) | 1394, 1444, 2101, 2250, 2303, 4285, 4327, 4411 |
| RsaNI | GTAC | 8 cut(s) | 1393, 1443, 2100, 2249, 2302, 4284, 4326, 4410 |
| RseI | CAYNNNNRTG | 4 cut(s) | 144, 2784, 3081, 3987 |
| Sau96I | GGNCC | 6 cut(s) | 125, 2128, 4028, 4531, 5078, 5110 |
| ScaI | AGTACT | 1 cut(s) | 2250 |
| ScrFI | CCNGG | 8 cut(s) | 554, 1466, 2257, 3453, 4745, 4947, 5108, 5114 |
| SduI | GDGCHC | 2 cut(s) | 1078, 4223 |
| SfcI | CTRYAG | 7 cut(s) | 1692, 1892, 4158, 4296, 4433, 4559, 4650 |
| Sfr274I | CTCGAG | 2 cut(s) | 3539, 5038 |
| SinI | GGWCC | 5 cut(s) | 125, 2128, 4028, 4531, 5078 |
| SlaI | CTCGAG | 2 cut(s) | 3539, 5038 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 144, 2784, 3081, 3987 |
| SmlI | CTYRAG | 7 cut(s) | 500, 1512, 2078, 2333, 3539, 4601, 5038 |
| SmoI | CTYRAG | 7 cut(s) | 500, 1512, 2078, 2333, 3539, 4601, 5038 |
| SphI | GCATGC | 1 cut(s) | 2109 |
| SseBI | AGGCCT | 1 cut(s) | 1505 |
| SspI | AATATT | 1 cut(s) | 4480 |
| SspMI | CTAG | 4 cut(s) | 3170, 3227, 4698, 5118 |
| StuI | AGGCCT | 1 cut(s) | 1505 |
| StyD4I | CCNGG | 8 cut(s) | 552, 1464, 2255, 3451, 4743, 4945, 5106, 5112 |
| StyI | CCWWGG | 3 cut(s) | 1203, 1788, 3214 |
| TaiI | ACGT | 5 cut(s) | 1645, 2521, 3374, 3592, 4467 |
| TaqI | TCGA | 5 cut(s) | 1628, 1707, 3540, 3598, 5039 |
| TaqII | GACCGA | 1 cut(s) | 3111 |
| TatI | WGTACW | 6 cut(s) | 1392, 1442, 2099, 2248, 2301, 4409 |
| TauI | GCSGC | 3 cut(s) | 2146, 3200, 3285 |
| TseI | GCWGC | 8 cut(s) | 1691, 2329, 3653, 4748, 4751, 4804, 4815, 4996 |
| TspGWI | ACGGA | 6 cut(s) | 583, 1048, 1111, 3380, 3733, 4571 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 209, 1013, 2234 |
| VpaK11BI | GGWCC | 5 cut(s) | 125, 2128, 4028, 4531, 5078 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3516 |
| XbaI | TCTAGA | 2 cut(s) | 3169, 4697 |
| XceI | RCATGY | 5 cut(s) | 1891, 2109, 2574, 4246, 5052 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2670, 3562 |
| XhoI | CTCGAG | 2 cut(s) | 3539, 5038 |
| XmiI | GTMKAC | 2 cut(s) | 2685, 4953 |
| XspI | CTAG | 4 cut(s) | 3170, 3227, 4698, 5118 |
| ZrmI | AGTACT | 1 cut(s) | 2250 |
| Zsp2I | ATGCAT | 1 cut(s) | 2092 |