TPL-binding domain in jasmonate signalling
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G36670 AT5G36670 AT5G36670 AT5G36670 AT5G36670 AT5G36740 AT5G36740 AT5G36740 AT5G36740 AT5G36740 |
| fragaria_vesca | FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 |
| malus_domestica | MD03G1262700.v1.1 MD11G1283400.v1.1 |
| prunus_persica | Prupe.8G239000_v2.0.a1 |
| pyrus_communis | pycom03g21020 pycom11g25090 |
| rosa_chinensis | RchiOBHm_Chr6g0290741 RchiOBHm_Chr6g0290751 |
| rosa_laevigata | RLG00000012182 |
| rosa_multiflora | Rmu_co8421285.1_g000001 Rmu_sc0000043.1_g000020 |
| rosa_roxburghii | Rroxscaffold_7G00176760 |
| rosa_rugosa | Rorug06G0214400 Rorug06G0214500 Rorug06G0214600 |
| rosa_samantha | Rh6AG325000 Rh6BG332600 Rh6CG338300 Rh6DG325800 |
| rosa_wichuraiana | Rw6G028220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1768 |
| Acc16I | TGCGCA | 1 cut(s) | 2848 |
| Acc36I | ACCTGC | 3 cut(s) | 2768, 3340, 4537 |
| AccB1I | GGYRCC | 1 cut(s) | 4205 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 209, 1013 |
| AccBSI | CCGCTC | 2 cut(s) | 690, 753 |
| AccI | GTMKAC | 4 cut(s) | 1093, 2670, 4742, 4938 |
| AccII | CGCG | 2 cut(s) | 370, 568 |
| AclWI | GGATC | 6 cut(s) | 1155, 1814, 2570, 3076, 3880, 4564 |
| AcoI | YGGCCR | 1 cut(s) | 550 |
| AcuI | CTGAAG | 7 cut(s) | 2063, 3585, 4062, 4164, 4284, 4665, 5064 |
| AcyI | GRCGYC | 1 cut(s) | 3253 |
| AdeI | CACNNNGTG | 2 cut(s) | 3611, 4974 |
| AfaI | GTAC | 7 cut(s) | 1385, 1435, 2086, 2288, 4270, 4312, 4813 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 103, 209, 1013, 2219, 3230, 3503, 4883, 5110 |
| AflIII | ACRYGT | 3 cut(s) | 2555, 2711, 5045 |
| AgeI | ACCGGT | 1 cut(s) | 1264 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2446 |
| AjnI | CCWGG | 7 cut(s) | 1455, 2240, 3436, 4728, 4930, 5103, 5109 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 269, 301, 923, 955, 975, 1007 |
| AleI | CACNNNNGTG | 1 cut(s) | 3066 |
| Alw21I | GWGCWC | 2 cut(s) | 1078, 1294 |
| Alw26I | GTCTC | 7 cut(s) | 143, 260, 1113, 1180, 1255, 4583, 4852 |
| AlwI | GGATC | 6 cut(s) | 1155, 1814, 2570, 3076, 3880, 4564 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1013, 2444, 3881, 4175 |
| Ama87I | CYCGRG | 3 cut(s) | 1235, 3524, 5035 |
| AoxI | GGCC | 3 cut(s) | 550, 1494, 5107 |
| ApeKI | GCWGC | 9 cut(s) | 1682, 2104, 2314, 3638, 4054, 4582, 4733, 4800, 4981 |
| AsiGI | ACCGGT | 1 cut(s) | 1264 |
| AspLEI | GCGC | 2 cut(s) | 2849, 4958 |
| AspS9I | GGNCC | 5 cut(s) | 125, 2113, 4516, 5075, 5107 |
| AsuC2I | CCSGG | 2 cut(s) | 554, 4082 |
| AsuII | TTCGAA | 1 cut(s) | 56 |
| AvaI | CYCGRG | 3 cut(s) | 1235, 3524, 5035 |
| AvaII | GGWCC | 4 cut(s) | 125, 2113, 4516, 5075 |
| BaeGI | GKGCMC | 1 cut(s) | 4208 |
| BanI | GGYRCC | 1 cut(s) | 4205 |
| BbsI | GAAGAC | 3 cut(s) | 2141, 2442, 2544 |
| Bbv12I | GWGCWC | 2 cut(s) | 1078, 1294 |
| BbvCI | CCTCAGC | 2 cut(s) | 3855, 3882 |
| BbvI | GCAGC | 9 cut(s) | 1669, 2091, 2301, 3625, 4041, 4569, 4720, 4812, 4993 |
| BceAI | ACGGC | 1 cut(s) | 3208 |
| BciT130I | CCWGG | 7 cut(s) | 1457, 2242, 3438, 4730, 4932, 5105, 5111 |
| BclI | TGATCA | 1 cut(s) | 136 |
| BcnI | CCSGG | 2 cut(s) | 554, 4082 |
| BcoDI | GTCTC | 7 cut(s) | 143, 260, 1113, 1180, 1255, 4583, 4852 |
| BfaI | CTAG | 4 cut(s) | 3155, 3212, 4683, 5115 |
| BfmI | CTRYAG | 6 cut(s) | 1683, 1883, 4281, 4418, 4544, 4635 |
| BfoI | RGCGCY | 1 cut(s) | 4959 |
| BfuAI | ACCTGC | 3 cut(s) | 2768, 3340, 4537 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3011 |
| BglII | AGATCT | 2 cut(s) | 17, 1325 |
| Bme1390I | CCNGG | 9 cut(s) | 554, 1457, 2242, 3438, 4082, 4730, 4932, 5105, 5111 |
| Bme18I | GGWCC | 4 cut(s) | 125, 2113, 4516, 5075 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2446 |
| BmeT110I | CYCGRG | 3 cut(s) | 1235, 3524, 5035 |
| BmgT120I | GGNCC | 5 cut(s) | 125, 2113, 4516, 5075, 5107 |
| BmiI | GGNNCC | 4 cut(s) | 2260, 3235, 4207, 4517 |
| BmrFI | CCNGG | 9 cut(s) | 554, 1457, 2242, 3438, 4082, 4730, 4932, 5105, 5111 |
| BmrI | ACTGGG | 2 cut(s) | 279, 2039 |
| BmuI | ACTGGG | 2 cut(s) | 279, 2039 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2601 |
| BpiI | GAAGAC | 3 cut(s) | 2141, 2442, 2544 |
| BpmI | CTGGAG | 4 cut(s) | 2900, 3710, 3854, 4839 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3855, 3882 |
| Bpu14I | TTCGAA | 1 cut(s) | 56 |
| BpuEI | CTTGAG | 5 cut(s) | 521, 1488, 2084, 2339, 4607 |
| BpuMI | CCSGG | 2 cut(s) | 554, 4082 |
| BsaAI | YACGTR | 2 cut(s) | 1634, 2712 |
| BsaBI | GATNNNNATC | 1 cut(s) | 4257 |
| BsaHI | GRCGYC | 1 cut(s) | 3253 |
| BsaI | GGTCTC | 2 cut(s) | 1180, 1255 |
| BsaJI | CCNNGG | 7 cut(s) | 1194, 1779, 3199, 3436, 4363, 4930, 5104 |
| BsaWI | WCCGGW | 2 cut(s) | 127, 1264 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 324, 354, 1210, 1240 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 103, 209, 1013, 2219, 3230, 3503, 4883, 5110 |
| Bse118I | RCCGGY | 2 cut(s) | 1264, 3270 |
| Bse3DI | GCAATG | 3 cut(s) | 2468, 3007, 4828 |
| Bse8I | GATNNNNATC | 1 cut(s) | 4257 |
| BseBI | CCWGG | 7 cut(s) | 1457, 2242, 3438, 4730, 4932, 5105, 5111 |
| BseDI | CCNNGG | 7 cut(s) | 1194, 1779, 3199, 3436, 4363, 4930, 5104 |
| BseJI | GATNNNNATC | 1 cut(s) | 4257 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 103, 209, 1013, 2219, 3230, 3503, 4883, 5110 |
| BseMI | GCAATG | 3 cut(s) | 2468, 3007, 4828 |
| BseRI | GAGGAG | 2 cut(s) | 295, 2592 |
| BseSI | GKGCMC | 1 cut(s) | 4208 |
| BseXI | GCAGC | 9 cut(s) | 1669, 2091, 2301, 3625, 4041, 4569, 4720, 4812, 4993 |
| BsgI | GTGCAG | 1 cut(s) | 3588 |
| Bsh1236I | CGCG | 2 cut(s) | 370, 568 |
| Bsh1285I | CGRYCG | 2 cut(s) | 368, 566 |
| BshFI | GGCC | 3 cut(s) | 552, 1496, 5109 |
| BshNI | GGYRCC | 1 cut(s) | 4205 |
| BshTI | ACCGGT | 1 cut(s) | 1264 |
| BsiEI | CGRYCG | 2 cut(s) | 368, 566 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1078, 1294 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1235, 3524, 5035 |
| BsiSI | CCGG | 5 cut(s) | 128, 553, 1265, 3271, 4081 |
| BslFI | GGGAC | 5 cut(s) | 2735, 3367, 3585, 4529, 4913 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 103, 209, 1013, 2219, 3230, 3503, 4883, 5110 |
| BsmAI | GTCTC | 7 cut(s) | 143, 260, 1113, 1180, 1255, 4583, 4852 |
| BsmFI | GGGAC | 5 cut(s) | 2735, 3367, 3585, 4529, 4913 |
| BsmI | GAATGC | 5 cut(s) | 550, 2188, 3002, 3090, 3773 |
| BsnI | GGCC | 3 cut(s) | 552, 1496, 5109 |
| Bso31I | GGTCTC | 2 cut(s) | 1180, 1255 |
| BsoBI | CYCGRG | 3 cut(s) | 1235, 3524, 5035 |
| Bsp119I | TTCGAA | 1 cut(s) | 56 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1078, 1294, 4208 |
| Bsp19I | CCATGG | 1 cut(s) | 3199 |
| BspANI | GGCC | 3 cut(s) | 552, 1496, 5109 |
| BspFNI | CGCG | 2 cut(s) | 370, 568 |
| BspHI | TCATGA | 7 cut(s) | 4030, 4072, 4132, 4438, 4504, 4528, 4747 |
| BspLI | GGNNCC | 4 cut(s) | 2260, 3235, 4207, 4517 |
| BspMAI | CTGCAG | 3 cut(s) | 1687, 4422, 4548 |
| BspMI | ACCTGC | 3 cut(s) | 2768, 3340, 4537 |
| BspPI | GGATC | 6 cut(s) | 1155, 1814, 2570, 3076, 3880, 4564 |
| BspT104I | TTCGAA | 1 cut(s) | 56 |
| BspT107I | GGYRCC | 1 cut(s) | 4205 |
| BspTNI | GGTCTC | 2 cut(s) | 1180, 1255 |
| BsrBI | CCGCTC | 2 cut(s) | 690, 753 |
| BsrDI | GCAATG | 3 cut(s) | 2468, 3007, 4828 |
| BsrFI | RCCGGY | 2 cut(s) | 1264, 3270 |
| BssAI | RCCGGY | 2 cut(s) | 1264, 3270 |
| BssECI | CCNNGG | 7 cut(s) | 1194, 1779, 3199, 3436, 4363, 4930, 5104 |
| BssNAI | GTATAC | 1 cut(s) | 2671 |
| BssNI | GRCGYC | 1 cut(s) | 3253 |
| BssT1I | CCWWGG | 4 cut(s) | 1194, 1779, 3199, 4363 |
| Bst1107I | GTATAC | 1 cut(s) | 2671 |
| Bst2UI | CCWGG | 7 cut(s) | 1457, 2242, 3438, 4730, 4932, 5105, 5111 |
| BstACI | GRCGYC | 1 cut(s) | 3253 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1010, 2467, 2810 |
| BstBAI | YACGTR | 2 cut(s) | 1634, 2712 |
| BstBI | TTCGAA | 1 cut(s) | 56 |
| BstC8I | GCNNGC | 9 cut(s) | 550, 1687, 1880, 2092, 2468, 3272, 3401, 3636, 4979 |
| BstDSI | CCRYGG | 1 cut(s) | 3199 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3501 |
| BstFNI | CGCG | 2 cut(s) | 370, 568 |
| BstH2I | RGCGCY | 1 cut(s) | 4959 |
| BstHHI | GCGC | 2 cut(s) | 2849, 4958 |
| BstMAI | GTCTC | 7 cut(s) | 143, 260, 1113, 1180, 1255, 4583, 4852 |
| BstMCI | CGRYCG | 2 cut(s) | 368, 566 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 1010, 1790, 2125, 2467, 2810, 3011, 3788 |
| BstNI | CCWGG | 7 cut(s) | 1457, 2242, 3438, 4730, 4932, 5105, 5111 |
| BstNSI | RCATGY | 5 cut(s) | 1882, 2094, 2559, 4231, 5049 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2601 |
| BstSCI | CCNGG | 9 cut(s) | 552, 1455, 2240, 3436, 4080, 4728, 4930, 5103, 5109 |
| BstSFI | CTRYAG | 6 cut(s) | 1683, 1883, 4281, 4418, 4544, 4635 |
| BstSLI | GKGCMC | 1 cut(s) | 4208 |
| BstUI | CGCG | 2 cut(s) | 370, 568 |
| BstV1I | GCAGC | 9 cut(s) | 1669, 2091, 2301, 3625, 4041, 4569, 4720, 4812, 4993 |
| BstV2I | GAAGAC | 3 cut(s) | 2141, 2442, 2544 |
| BstX2I | RGATCY | 4 cut(s) | 17, 1325, 2562, 4556 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3068 |
| BstYI | RGATCY | 4 cut(s) | 17, 1325, 2562, 4556 |
| BstZ17I | GTATAC | 1 cut(s) | 2671 |
| BsuRI | GGCC | 3 cut(s) | 552, 1496, 5109 |
| BtgI | CCRYGG | 1 cut(s) | 3199 |
| BtgZI | GCGATG | 1 cut(s) | 2167 |
| BtsI | GCAGTG | 4 cut(s) | 1656, 1743, 3144, 4200 |
| BveI | ACCTGC | 3 cut(s) | 2768, 3340, 4537 |
| Cac8I | GCNNGC | 9 cut(s) | 550, 1687, 1880, 2092, 2468, 3272, 3401, 3636, 4979 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1013, 2444, 3881, 4175 |
| CciI | TCATGA | 7 cut(s) | 4030, 4072, 4132, 4438, 4504, 4528, 4747 |
| CfoI | GCGC | 2 cut(s) | 2849, 4958 |
| Cfr10I | RCCGGY | 2 cut(s) | 1264, 3270 |
| Cfr13I | GGNCC | 5 cut(s) | 125, 2113, 4516, 5075, 5107 |
| CseI | GACGC | 2 cut(s) | 2108, 3242 |
| Csp6I | GTAC | 7 cut(s) | 1384, 1434, 2085, 2287, 4269, 4311, 4812 |
| CspAI | ACCGGT | 1 cut(s) | 1264 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2671, 2706 |
| CviQI | GTAC | 7 cut(s) | 1384, 1434, 2085, 2287, 4269, 4311, 4812 |
| DraI | TTTAAA | 2 cut(s) | 1798, 3901 |
| DraIII | CACNNNGTG | 2 cut(s) | 3611, 4974 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1768 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2446 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1768 |
| EaeI | YGGCCR | 1 cut(s) | 550 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2446 |
| EciI | GGCGGA | 4 cut(s) | 614, 635, 677, 824 |
| Eco130I | CCWWGG | 4 cut(s) | 1194, 1779, 3199, 4363 |
| Eco147I | AGGCCT | 1 cut(s) | 1496 |
| Eco31I | GGTCTC | 2 cut(s) | 1180, 1255 |
| Eco32I | GATATC | 2 cut(s) | 3448, 4500 |
| Eco47I | GGWCC | 4 cut(s) | 125, 2113, 4516, 5075 |
| Eco57I | CTGAAG | 7 cut(s) | 2063, 3585, 4062, 4164, 4284, 4665, 5064 |
| Eco88I | CYCGRG | 3 cut(s) | 1235, 3524, 5035 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3501 |
| EcoRI | GAATTC | 3 cut(s) | 2343, 4686, 4909 |
| EcoRII | CCWGG | 7 cut(s) | 1455, 2240, 3436, 4728, 4930, 5103, 5109 |
| EcoRV | GATATC | 2 cut(s) | 3448, 4500 |
| EcoT14I | CCWWGG | 4 cut(s) | 1194, 1779, 3199, 4363 |
| EcoT22I | ATGCAT | 1 cut(s) | 2077 |
| ErhI | CCWWGG | 4 cut(s) | 1194, 1779, 3199, 4363 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1347, 1379, 2301, 2333 |
| FaqI | GGGAC | 5 cut(s) | 2735, 3367, 3585, 4529, 4913 |
| FauI | CCCGC | 1 cut(s) | 3245 |
| FauNDI | CATATG | 2 cut(s) | 4372, 4962 |
| FbaI | TGATCA | 1 cut(s) | 136 |
| FblI | GTMKAC | 4 cut(s) | 1093, 2670, 4742, 4938 |
| FspBI | CTAG | 4 cut(s) | 3155, 3212, 4683, 5115 |
| FspI | TGCGCA | 1 cut(s) | 2848 |
| GlaI | GCGC | 2 cut(s) | 2848, 4957 |
| GsuI | CTGGAG | 4 cut(s) | 2900, 3710, 3854, 4839 |
| HaeII | RGCGCY | 1 cut(s) | 4959 |
| HaeIII | GGCC | 3 cut(s) | 552, 1496, 5109 |
| HapII | CCGG | 5 cut(s) | 128, 553, 1265, 3271, 4081 |
| HgaI | GACGC | 2 cut(s) | 2108, 3242 |
| HhaI | GCGC | 2 cut(s) | 2849, 4958 |
| Hin1I | GRCGYC | 1 cut(s) | 3253 |
| Hin6I | GCGC | 2 cut(s) | 2847, 4956 |
| HinP1I | GCGC | 2 cut(s) | 2847, 4956 |
| HincII | GTYRAC | 4 cut(s) | 2251, 3058, 3477, 4743 |
| HindII | GTYRAC | 4 cut(s) | 2251, 3058, 3477, 4743 |
| HpaI | GTTAAC | 1 cut(s) | 3477 |
| HpaII | CCGG | 5 cut(s) | 128, 553, 1265, 3271, 4081 |
| Hpy99I | CGWCG | 1 cut(s) | 2508 |
| HpyCH4IV | ACGT | 5 cut(s) | 1633, 2503, 2711, 3356, 3574 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 1010, 1790, 2125, 2467, 2810, 3011, 3788 |
| HpySE526I | ACGT | 5 cut(s) | 1633, 2503, 2711, 3356, 3574 |
| Hsp92I | GRCGYC | 1 cut(s) | 3253 |
| HspAI | GCGC | 2 cut(s) | 2847, 4956 |
| KroI | GCCGGC | 1 cut(s) | 3270 |
| KroNI | GCCGGC | 1 cut(s) | 3272 |
| Ksp22I | TGATCA | 1 cut(s) | 136 |
| KspAI | GTTAAC | 1 cut(s) | 3477 |
| LmnI | GCTCC | 1 cut(s) | 3835 |
| Lsp1109I | GCAGC | 9 cut(s) | 1669, 2091, 2301, 3625, 4041, 4569, 4720, 4812, 4993 |
| MaeI | CTAG | 4 cut(s) | 3155, 3212, 4683, 5115 |
| MaeII | ACGT | 5 cut(s) | 1633, 2503, 2711, 3356, 3574 |
| MbiI | CCGCTC | 2 cut(s) | 690, 753 |
| MfeI | CAATTG | 1 cut(s) | 204 |
| MflI | RGATCY | 4 cut(s) | 17, 1325, 2562, 4556 |
| MhlI | GDGCHC | 3 cut(s) | 1078, 1294, 4208 |
| MmeI | TCCRAC | 2 cut(s) | 3675, 4701 |
| Mph1103I | ATGCAT | 1 cut(s) | 2077 |
| MroNI | GCCGGC | 1 cut(s) | 3270 |
| MslI | CAYNNNNRTG | 4 cut(s) | 144, 2769, 3066, 3972 |
| MspA1I | CMGCKG | 3 cut(s) | 3832, 4054, 4859 |
| MspI | CCGG | 5 cut(s) | 128, 553, 1265, 3271, 4081 |
| MspR9I | CCNGG | 9 cut(s) | 554, 1457, 2242, 3438, 4082, 4730, 4932, 5105, 5111 |
| MunI | CAATTG | 1 cut(s) | 204 |
| Mva1269I | GAATGC | 5 cut(s) | 550, 2188, 3002, 3090, 3773 |
| MvaI | CCWGG | 7 cut(s) | 1457, 2242, 3438, 4730, 4932, 5105, 5111 |
| MvnI | CGCG | 2 cut(s) | 370, 568 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 1010, 1790, 2125, 2467, 2810, 3011, 3788 |
| NaeI | GCCGGC | 1 cut(s) | 3272 |
| NciI | CCSGG | 2 cut(s) | 554, 4082 |
| NcoI | CCATGG | 1 cut(s) | 3199 |
| NdeI | CATATG | 2 cut(s) | 4372, 4962 |
| NgoMIV | GCCGGC | 1 cut(s) | 3270 |
| NlaIV | GGNNCC | 4 cut(s) | 2260, 3235, 4207, 4517 |
| NsbI | TGCGCA | 1 cut(s) | 2848 |
| NsiI | ATGCAT | 1 cut(s) | 2077 |
| NspI | RCATGY | 5 cut(s) | 1882, 2094, 2559, 4231, 5049 |
| NspV | TTCGAA | 1 cut(s) | 56 |
| OliI | CACNNNNGTG | 1 cut(s) | 3066 |
| PaeI | GCATGC | 2 cut(s) | 1882, 2094 |
| PaeR7I | CTCGAG | 2 cut(s) | 3524, 5035 |
| PagI | TCATGA | 7 cut(s) | 4030, 4072, 4132, 4438, 4504, 4528, 4747 |
| PceI | AGGCCT | 1 cut(s) | 1496 |
| PciI | ACATGT | 2 cut(s) | 2555, 5045 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3580 |
| PctI | GAATGC | 5 cut(s) | 550, 2188, 3002, 3090, 3773 |
| PdiI | GCCGGC | 1 cut(s) | 3272 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 209, 1013 |
| PinAI | ACCGGT | 1 cut(s) | 1264 |
| Ppu21I | YACGTR | 2 cut(s) | 1634, 2712 |
| PscI | ACATGT | 2 cut(s) | 2555, 5045 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2601 |
| Psp6I | CCWGG | 7 cut(s) | 1455, 2240, 3436, 4728, 4930, 5103, 5109 |
| PspGI | CCWGG | 7 cut(s) | 1455, 2240, 3436, 4728, 4930, 5103, 5109 |
| PspN4I | GGNNCC | 4 cut(s) | 2260, 3235, 4207, 4517 |
| PspPI | GGNCC | 5 cut(s) | 125, 2113, 4516, 5075, 5107 |
| PspXI | VCTCGAGB | 1 cut(s) | 5035 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4419, 4451 |
| PstI | CTGCAG | 3 cut(s) | 1687, 4422, 4548 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1013, 2444, 3881, 4175 |
| PsuI | RGATCY | 4 cut(s) | 17, 1325, 2562, 4556 |
| PvuII | CAGCTG | 3 cut(s) | 3832, 4054, 4859 |
| RsaI | GTAC | 7 cut(s) | 1385, 1435, 2086, 2288, 4270, 4312, 4813 |
| RsaNI | GTAC | 7 cut(s) | 1384, 1434, 2085, 2287, 4269, 4311, 4812 |
| RseI | CAYNNNNRTG | 4 cut(s) | 144, 2769, 3066, 3972 |
| SalI | GTCGAC | 1 cut(s) | 4741 |
| Sau96I | GGNCC | 5 cut(s) | 125, 2113, 4516, 5075, 5107 |
| ScrFI | CCNGG | 9 cut(s) | 554, 1457, 2242, 3438, 4082, 4730, 4932, 5105, 5111 |
| SduI | GDGCHC | 3 cut(s) | 1078, 1294, 4208 |
| SfcI | CTRYAG | 6 cut(s) | 1683, 1883, 4281, 4418, 4544, 4635 |
| Sfr274I | CTCGAG | 2 cut(s) | 3524, 5035 |
| SfuI | TTCGAA | 1 cut(s) | 56 |
| SinI | GGWCC | 4 cut(s) | 125, 2113, 4516, 5075 |
| SlaI | CTCGAG | 2 cut(s) | 3524, 5035 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 144, 2769, 3066, 3972 |
| SmlI | CTYRAG | 7 cut(s) | 500, 1503, 2063, 2318, 3524, 4586, 5035 |
| SmoI | CTYRAG | 7 cut(s) | 500, 1503, 2063, 2318, 3524, 4586, 5035 |
| SphI | GCATGC | 2 cut(s) | 1882, 2094 |
| SseBI | AGGCCT | 1 cut(s) | 1496 |
| SspI | AATATT | 2 cut(s) | 2411, 4465 |
| SspMI | CTAG | 4 cut(s) | 3155, 3212, 4683, 5115 |
| StuI | AGGCCT | 1 cut(s) | 1496 |
| StyD4I | CCNGG | 9 cut(s) | 552, 1455, 2240, 3436, 4080, 4728, 4930, 5103, 5109 |
| StyI | CCWWGG | 4 cut(s) | 1194, 1779, 3199, 4363 |
| TaiI | ACGT | 5 cut(s) | 1636, 2506, 2714, 3359, 3577 |
| TaqI | TCGA | 6 cut(s) | 56, 1619, 3525, 3583, 4742, 5036 |
| TatI | WGTACW | 4 cut(s) | 1383, 1433, 2084, 2286 |
| TauI | GCSGC | 3 cut(s) | 2131, 3185, 3270 |
| TseI | GCWGC | 9 cut(s) | 1682, 2104, 2314, 3638, 4054, 4582, 4733, 4800, 4981 |
| TspGWI | ACGGA | 3 cut(s) | 1048, 3365, 4556 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 209, 1013 |
| VpaK11BI | GGWCC | 4 cut(s) | 125, 2113, 4516, 5075 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3501 |
| XbaI | TCTAGA | 2 cut(s) | 3154, 4682 |
| XceI | RCATGY | 5 cut(s) | 1882, 2094, 2559, 4231, 5049 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2655, 3547 |
| XhoI | CTCGAG | 2 cut(s) | 3524, 5035 |
| XmiI | GTMKAC | 4 cut(s) | 1093, 2670, 4742, 4938 |
| XspI | CTAG | 4 cut(s) | 3155, 3212, 4683, 5115 |
| Zsp2I | ATGCAT | 1 cut(s) | 2077 |