Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0002658

Physical Location & Seq

Genomic Coordinates Reverse (-)

21367330 .. 21372591

Gene Structure 5262 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g21020.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2949 bp

ATGCGTGCAGGTTGGACCATTCAATATAGGCCTAGGAATGGCAAAGATTACAAGGATGCAGTGTACGTAACTCCAGCAGGACAGACTCACTGGTCAGTCACCAAGGCTTACACAACTCTTAAAGTGCATTGTGAAAATGGTGAAAATAATTCCAAGTTTTGTAAGCCTGGCTTCAAATTTACTTTGATACCACCAGAGGAAATCGACATGCTAGCAAGGATACAAGTCGTGAAAAGGGTGGGGAAAAAGAAAGGGAAGAAGGGTGAAATTAACAAAAAACAAAAGAAGAAAAAGGGTGGGAATACAGTGGATGGAGTTACCGAAGAGAAAAAGAAAAAGAAATTGGGTAGGCCATTCAAAGGGAAACGTTTGCTTCTTGAAAAGGATCATTCAGCACGTGCAGCATGCAAGGGAAGGCGAAGTTTATATAATACAAAAAGTAGAAAGCGATGTGCTTTACTGGTTCGGAACTCTGAGAATGCTGATTCAGATGATGATGGCCATGTACTATATGACGGGAAAAGAACAGTACTTGCCTGGATGATTGATTTGGGAACCCTATCACTTAATTCGAAGGTGAAGTACATGAACAGGAGAAAGACACAGGTGCTTCTTGAGGGTAACATTACTAGAGATGGAATTCATTGTGGTTGCTGTGGAGATACAATCTCAATTTCAAAGTTTGTAACCCATGCCAGAAGTGATTACTCTGAGCCATTTAAACATATATATCTAGACTCAGGGTCTACCCTTTTGCAATGCCTGCTTAACTCATGGAATAAACAGGATGAATACGACCGTCGGGGATTCCATTTTGTGGGTGTTAACAGGGAAGACCCAAACGATGATACATGTGGAATCTGTGGAGATGGTGGGAACTTGATTTGTTGTGATGGCTGTCCATCAACATTCCACCAAAATTGTTTAGAGATAAAGAAGTTCCCCTCAGGTGATTGGCATTGTGTATATTGTTCATGCAAATTTTGTGGGATGTTTGGCGGTAATATATGCGAAACCGATGGCAATGACAATGAAAATGTAGCTGCATCAGCATTAATTACCTGCCATTTGTGTGAGGAAAAATATCACAAATCCTGTATTCAGGCAAAGGATGCTGTAAATGATGATGCCAATGATCCATCCTTCTGCGGCAAGAATTGTCAAGAGCTATTTGCGAGTCTTCAGATGCTTCTTGGAGTGAGGCAAGAAATCGAAGATGGATTTTCATTGACTCTGATTCATCGATCTGATATGAGCTCAATTTCTATTTGTGACACACCACAGATAGATGATTGTGATTCAAAGCTAATTGAATGCAATTCCAAGCTGGCTGTTGCATTTTTACTAATGGATGAGTGTTTTTTACCTATGGTTGACCACAGAAGTGGAGTCAATTTGATTCATAATATTCTGTATAATCGTGGGTCAAATTTTAGTAGACTGAATTATAGTGGTTTCTTGACTGCAATTCTAGAAAGAGGTGATGAGATCATATCAGCGGCATCCATCCGGATTCATGGGAACTATTTAGCAGAGATGCCATTTGTTGGGACCCGATATATGTACAGGCGTCAAGGAATGTGCCGTCGGCTTCTAACTGGAATTGAATCTGCTCTCAGCTCGTTGAATGTTGAAAGATTGGTTATACCTGCAATCTCGGAACTCAGAGAAACATGGACTTCTGTTTTTGGTTTTAAGCCCCTTGAAGAATCAAGCAAGCAGAGGATGAAGAGCATGAACATATTGGTTTTCCCTGGTGTAGATATCTTAGAGAAGCCAGTGTCGAAGCAGTTAACAGAAGCAAATATGATTCCCGCTGAAGGTGTGAGGTCCATTGAACTTGAGCATCAGCAACTCGAGCAAGAGGTTTTATGTGATACTAATGACAAACGTTTGGTTGCGTCTGGAATTGAAGCATCTGCACCCTGTGGAAATGAGGCAAATGATGAACTTGCTGATGTTGAATCCTATACACAGCATCAGTGTGGTGTTTCTCAGGATAATCTGGAGGAGAAAAGCAATACAATTATGATTCCTCCTCAACCAACGTGTGATATTCATGAACAAACTGAGGAGGTCAATGAACACCAGAGCTCTGCTTCAGTTCCTGATGTAGGGACAGTGCAAGTGGACACCCAACATGACCAGCATATCATGCTTGAAGTCGAAAACAAATCTTTGACATCACATCATAGTAGTTCTGTTAGGAGCCACAATTCTCATGACGAAGGATCCATTTGCCGCTCTACTGAAAATAATACCACCGAGCAGCAGCACATAGGACTTGAAGTAAGGGTTTCCAATGAATTTACTGTCTGCCATGATTCAGCGACTACAACTGAGGCATCTCATGAGGCAAGTGACCTTAAGCATCAGGATTCTCTAAGTGTGCAGGTTGCAGGATCTATTTCCTGTCCGGATGGAAAGATGTCTGAGACTTGTGAAGCGGAATGTAACCATCCTTCTACTCAGCATACACCTGCAGTGATAGTTGAGGAGCATCCAGAATCTATCAAGTGTTATGGCTCTGAAATTCTGACCGAAACTAGTGAGGTCGCCAGTGATGTACTTCACCCAACTCCCCTGTTGCCTCACCAGAAAGCAGATGAGCTTGAAGGTAACAGGCTCAACACTCATAAAGTTGCAGATGGGTTTGAAGGCAACGGGCTCAACACTCGTAATGTTGCAGATGAGTTTGAAGGCAATGGGCTCAACACTCAAAAAGTCGACACTGCTCTTACATGTGGACATGCCAAGTCCCCGGAGGTTACTGATTTGAATTTAACTCCCGAGGAGTCTCAGAACACAACATCCATAAAGCAATCTGAACTCGATTCTCAGACAAGTCCCACACAGTGCAACTCGAGCAATACGCCTGTTGTGGCTCTTCACTGCGCATCCGGTGGGGGTACTTCGGGGGCGGTTATTCTATCAAATCAGGCTAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006357 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0010648 GO:0016567 GO:0016740 GO:0017015 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0023051 GO:0023057 GO:0030510 GO:0030514 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032446 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0046332 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0070013 GO:0070410 GO:0070412 GO:0070647 GO:0071704 GO:0080090 GO:0090092 GO:0090101 GO:0090287 GO:0090288 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:1903844 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AT_hook Jas PHD

Protein Analysis

983

Amino Acids

108.63

Weight (kDa)

5.71

Isoelectric Point (pI)

47.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002658)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G36670 AT5G36670 AT5G36670 AT5G36670 AT5G36670 AT5G36740 AT5G36740 AT5G36740 AT5G36740 AT5G36740
fragaria_vesca	FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330 FvH4_2g23330
malus_domestica	MD03G1262700.v1.1 MD11G1283400.v1.1
prunus_persica	Prupe.8G239000_v2.0.a1
pyrus_communis	pycom03g21020 pycom11g25090
rosa_chinensis	RchiOBHm_Chr6g0290741 RchiOBHm_Chr6g0290751
rosa_laevigata	RLG00000012182
rosa_multiflora	Rmu_co8421285.1_g000001 Rmu_sc0000043.1_g000020
rosa_roxburghii	Rroxscaffold_7G00176760
rosa_rugosa	Rorug06G0214400 Rorug06G0214500 Rorug06G0214600
rosa_samantha	Rh6AG325000 Rh6BG332600 Rh6CG338300 Rh6DG325800
rosa_wichuraiana	Rw6G028220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2488
AasI	GACNNNNNNGTC	1 cut(s)	91
Acc16I	TGCGCA	1 cut(s)	2896
Acc36I	ACCTGC	4 cut(s)	1070, 1657, 2383, 2488
AccB7I	CCANNNNNTGG	2 cut(s)	817, 1547
AccBSI	CCGCTC	1 cut(s)	2244
AccI	GTMKAC	3 cut(s)	746, 1438, 2727
AccIII	TCCGGA	2 cut(s)	1509, 2416
AciI	CCGC	7 cut(s)	999, 1149, 1499, 1815, 2242, 2447, 2921
AclI	AACGTT	2 cut(s)	367, 1891
AclWI	GGATC	5 cut(s)	393, 1130, 2226, 2239, 2410
AcoI	YGGCCR	1 cut(s)	499
AcsI	RAATTY	7 cut(s)	176, 639, 980, 1429, 2306, 2532, 2779
AcuI	CTGAAG	3 cut(s)	1166, 1839, 2085
AcvI	CACGTG	1 cut(s)	398
AcyI	GRCGYC	1 cut(s)	1570
AdeI	CACNNNGTG	2 cut(s)	1928, 2856
AfaI	GTAC	7 cut(s)	65, 507, 531, 584, 1565, 2568, 2911
AfiI	CCNNNNNNNGG	6 cut(s)	38, 359, 817, 1547, 1820, 2114
AflII	CTTAAG	1 cut(s)	2366
AflIII	ACRYGT	3 cut(s)	851, 2048, 2741
AhdI	GACNNNNNGTC	1 cut(s)	742
AhlI	ACTAGT	1 cut(s)	2546
AjnI	CCWGG	3 cut(s)	166, 536, 1753
AjuI	GAANNNNNNNTTGG	2 cut(s)	326, 358
AleI	CACNNNNGTG	1 cut(s)	1383
AloI	GAACNNNNNNTCC	2 cut(s)	2795, 2827
AluBI	AGCT	8 cut(s)	1043, 1168, 1257, 1306, 1327, 1620, 2094, 2611
AluI	AGCT	8 cut(s)	1043, 1168, 1257, 1306, 1327, 1620, 2094, 2611
Alw21I	GWGCWC	2 cut(s)	1259, 2096
Alw26I	GTCTC	2 cut(s)	2429, 2802
AlwI	GGATC	5 cut(s)	393, 1130, 2226, 2239, 2410
AlwNI	CAGNNNCTG	1 cut(s)	2108
Ama87I	CYCGRG	3 cut(s)	1856, 2789, 2863
Aor13HI	TCCGGA	2 cut(s)	1509, 2416
AoxI	GGCC	3 cut(s)	29, 350, 499
ApeKI	GCWGC	4 cut(s)	401, 1043, 2269, 2272
ApoI	RAATTY	7 cut(s)	176, 639, 980, 1429, 2306, 2532, 2779
AseI	ATTAAT	1 cut(s)	1055
AspA2I	CCTAGG	1 cut(s)	32
AspLEI	GCGC	1 cut(s)	2897
AspS9I	GGNCC	3 cut(s)	15, 1551, 1830
AsuC2I	CCSGG	1 cut(s)	2762
AsuHPI	GGTGA	8 cut(s)	91, 152, 275, 589, 962, 1493, 2564, 2585
AsuII	TTCGAA	1 cut(s)	572
AsuNHI	GCTAGC	1 cut(s)	211
AvaI	CYCGRG	3 cut(s)	1856, 2789, 2863
AvaII	GGWCC	3 cut(s)	15, 1551, 1830
AvrII	CCTAGG	1 cut(s)	32
AxyI	CCTNAGG	1 cut(s)	946
BalI	TGGCCA	1 cut(s)	501
BamHI	GGATCC	1 cut(s)	2231
BanII	GRGCYC	4 cut(s)	1259, 2096, 2670, 2712
BarI	GAAGNNNNNNTAC	4 cut(s)	566, 598, 2446, 2478
BbrPI	CACGTG	1 cut(s)	398
BbsI	GAAGAC	2 cut(s)	840, 1172
Bbv12I	GWGCWC	2 cut(s)	1259, 2096
BbvI	GCAGC	4 cut(s)	413, 1030, 2281, 2284
BceAI	ACGGC	1 cut(s)	1569
BciT130I	CCWGG	3 cut(s)	168, 538, 1755
BciVI	GTATCC	1 cut(s)	213
BcnI	CCSGG	1 cut(s)	2762
BcoDI	GTCTC	2 cut(s)	2429, 2802
BcuI	ACTAGT	1 cut(s)	2546
BfaI	CTAG	7 cut(s)	33, 212, 630, 734, 1472, 2547, 2943
BfmI	CTRYAG	1 cut(s)	2481
BfrI	CTTAAG	1 cut(s)	2366
BfuAI	ACCTGC	4 cut(s)	1070, 1657, 2383, 2488
BfuI	GTATCC	1 cut(s)	213
BisI	GCNGC	7 cut(s)	402, 1044, 1150, 1500, 2242, 2270, 2273
BlnI	CCTAGG	1 cut(s)	32
BlsI	GCNGC	7 cut(s)	403, 1045, 1151, 1501, 2243, 2271, 2274
BmcAI	AGTACT	1 cut(s)	531
Bme1390I	CCNGG	4 cut(s)	168, 538, 1755, 2762
Bme18I	GGWCC	3 cut(s)	15, 1551, 1830
BmeRI	GACNNNNNGTC	1 cut(s)	742
BmeT110I	CYCGRG	3 cut(s)	1856, 2789, 2863
BmgT120I	GGNCC	3 cut(s)	15, 1551, 1830
BmiI	GGNNCC	5 cut(s)	556, 1552, 1553, 2210, 2233
BmrFI	CCNGG	4 cut(s)	168, 538, 1755, 2762
BmtI	GCTAGC	1 cut(s)	215
BpiI	GAAGAC	2 cut(s)	840, 1172
BpmI	CTGGAG	2 cut(s)	57, 2027
Bpu14I	TTCGAA	1 cut(s)	572
BpuEI	CTTGAG	2 cut(s)	635, 1862
BpuMI	CCSGG	1 cut(s)	2762
Bsa29I	ATCGAT	1 cut(s)	1243
BsaAI	YACGTR	2 cut(s)	67, 398
BsaHI	GRCGYC	1 cut(s)	1570
BsaJI	CCNNGG	5 cut(s)	32, 102, 1753, 2760, 2790
BsaWI	WCCGGW	3 cut(s)	1509, 2416, 2900
Bsc4I	CCNNNNNNNGG	6 cut(s)	38, 359, 817, 1547, 1820, 2114
Bse1I	ACTGG	5 cut(s)	95, 465, 1603, 1778, 2559
Bse21I	CCTNAGG	1 cut(s)	946
Bse3DI	GCAATG	3 cut(s)	764, 1030, 2710
BseAI	TCCGGA	2 cut(s)	1509, 2416
BseBI	CCWGG	3 cut(s)	168, 538, 1755
BseCI	ATCGAT	1 cut(s)	1243
BseDI	CCNNGG	5 cut(s)	32, 102, 1753, 2760, 2790
BseLI	CCNNNNNNNGG	6 cut(s)	38, 359, 817, 1547, 1820, 2114
BseMI	GCAATG	3 cut(s)	764, 1030, 2710
BseNI	ACTGG	5 cut(s)	95, 465, 1603, 1778, 2559
BseRI	GAGGAG	5 cut(s)	2024, 2028, 2087, 2510, 2807
BseXI	GCAGC	4 cut(s)	413, 1030, 2281, 2284
BsgI	GTGCAG	4 cut(s)	27, 420, 1905, 2411
Bsh1285I	CGRYCG	1 cut(s)	799
BshFI	GGCC	3 cut(s)	31, 352, 501
BshVI	ATCGAT	1 cut(s)	1243
BsiEI	CGRYCG	1 cut(s)	799
BsiHKAI	GWGCWC	2 cut(s)	1259, 2096
BsiHKCI	CYCGRG	3 cut(s)	1856, 2789, 2863
BsiSI	CCGG	4 cut(s)	1510, 2417, 2762, 2901
BslFI	GGGAC	4 cut(s)	1564, 2131, 2743, 2832
BslI	CCNNNNNNNGG	6 cut(s)	38, 359, 817, 1547, 1820, 2114
BsmAI	GTCTC	2 cut(s)	2429, 2802
BsmFI	GGGAC	4 cut(s)	1564, 2131, 2743, 2832
BsmI	GAATGC	2 cut(s)	484, 1319
BsnI	GGCC	3 cut(s)	31, 352, 501
BsoBI	CYCGRG	3 cut(s)	1856, 2789, 2863
Bsp119I	TTCGAA	1 cut(s)	572
Bsp1286I	GDGCHC	4 cut(s)	1259, 2096, 2670, 2712
Bsp13I	TCCGGA	2 cut(s)	1509, 2416
Bsp1407I	TGTACA	1 cut(s)	1563
Bsp143I	GATC	6 cut(s)	385, 1135, 1244, 1488, 2231, 2402
BspACI	CCGC	7 cut(s)	999, 1149, 1499, 1815, 2242, 2447, 2921
BspANI	GGCC	3 cut(s)	31, 352, 501
BspDI	ATCGAT	1 cut(s)	1243
BspEI	TCCGGA	2 cut(s)	1509, 2416
BspHI	TCATGA	3 cut(s)	2059, 2221, 2350
BspLI	GGNNCC	5 cut(s)	556, 1552, 1553, 2210, 2233
BspMAI	CTGCAG	1 cut(s)	2485
BspMI	ACCTGC	4 cut(s)	1070, 1657, 2383, 2488
BspOI	GCTAGC	1 cut(s)	215
BspPI	GGATC	5 cut(s)	393, 1130, 2226, 2239, 2410
BspQI	GCTCTTC	2 cut(s)	1724, 2892
BspT104I	TTCGAA	1 cut(s)	572
BspTI	CTTAAG	1 cut(s)	2366
BsrBI	CCGCTC	1 cut(s)	2244
BsrDI	GCAATG	3 cut(s)	764, 1030, 2710
BsrGI	TGTACA	1 cut(s)	1563
BsrI	ACTGG	5 cut(s)	95, 465, 1603, 1778, 2559
BssECI	CCNNGG	5 cut(s)	32, 102, 1753, 2760, 2790
BssMI	GATC	6 cut(s)	385, 1135, 1244, 1488, 2231, 2402
BssNI	GRCGYC	1 cut(s)	1570
BssT1I	CCWWGG	2 cut(s)	32, 102
Bst2UI	CCWGG	3 cut(s)	168, 538, 1755
Bst4CI	ACNGT	6 cut(s)	307, 529, 800, 2122, 2314, 2856
Bst6I	CTCTTC	3 cut(s)	318, 1724, 2892
BstACI	GRCGYC	1 cut(s)	1570
BstAFI	CTTAAG	1 cut(s)	2366
BstAPI	GCANNNNNTGC	3 cut(s)	763, 1112, 2155
BstAUI	TGTACA	1 cut(s)	1563
BstBAI	YACGTR	2 cut(s)	67, 398
BstBI	TTCGAA	1 cut(s)	572
BstC8I	GCNNGC	6 cut(s)	6, 213, 406, 764, 1329, 1718
BstENI	CCTNNNNNAGG	1 cut(s)	2112
BstHHI	GCGC	1 cut(s)	2897
BstKTI	GATC	6 cut(s)	388, 1138, 1247, 1491, 2234, 2405
BstMAI	GTCTC	2 cut(s)	2429, 2802
BstMBI	GATC	6 cut(s)	385, 1135, 1244, 1488, 2231, 2402
BstMCI	CGRYCG	1 cut(s)	799
BstMWI	GCNNNNNNNGC	7 cut(s)	401, 763, 1049, 1112, 1858, 2155, 2865
BstNI	CCWGG	3 cut(s)	168, 538, 1755
BstNSI	RCATGY	5 cut(s)	211, 408, 855, 2745, 2753
BstSCI	CCNGG	4 cut(s)	166, 536, 1753, 2760
BstSFI	CTRYAG	1 cut(s)	2481
BstSNI	TACGTA	1 cut(s)	67
BstV1I	GCAGC	4 cut(s)	413, 1030, 2281, 2284
BstV2I	GAAGAC	2 cut(s)	840, 1172
BstX2I	RGATCY	2 cut(s)	2231, 2402
BstXI	CCANNNNNNTGG	1 cut(s)	1385
BstYI	RGATCY	2 cut(s)	2231, 2402
Bsu15I	ATCGAT	1 cut(s)	1243
Bsu36I	CCTNAGG	1 cut(s)	946
BsuI	GTATCC	1 cut(s)	213
BsuRI	GGCC	3 cut(s)	31, 352, 501
BsuTUI	ATCGAT	1 cut(s)	1243
BtgZI	GCGATG	1 cut(s)	463
BtsI	GCAGTG	4 cut(s)	66, 2490, 2730, 2890
BveI	ACCTGC	4 cut(s)	1070, 1657, 2383, 2488
Cac8I	GCNNGC	6 cut(s)	6, 213, 406, 764, 1329, 1718
CaiI	CAGNNNCTG	1 cut(s)	2108
CciI	TCATGA	3 cut(s)	2059, 2221, 2350
CfoI	GCGC	1 cut(s)	2897
Cfr13I	GGNCC	3 cut(s)	15, 1551, 1830
ClaI	ATCGAT	1 cut(s)	1243
CseI	GACGC	2 cut(s)	1559, 1890
Csp6I	GTAC	7 cut(s)	64, 506, 530, 583, 1564, 2567, 2910
CspCI	CAANNNNNGTGG	4 cut(s)	902, 937, 967, 1002
CviQI	GTAC	7 cut(s)	64, 506, 530, 583, 1564, 2567, 2910
DpnI	GATC	6 cut(s)	387, 1137, 1246, 1490, 2233, 2404
DpnII	GATC	6 cut(s)	385, 1135, 1244, 1488, 2231, 2402
DraI	TTTAAA	1 cut(s)	721
DraIII	CACNNNGTG	2 cut(s)	1928, 2856
DrdI	GACNNNNNNGTC	1 cut(s)	91
DriI	GACNNNNNGTC	1 cut(s)	742
DseDI	GACNNNNNNGTC	1 cut(s)	91
EaeI	YGGCCR	1 cut(s)	499
Eam1104I	CTCTTC	3 cut(s)	318, 1724, 2892
Eam1105I	GACNNNNNGTC	1 cut(s)	742
EarI	CTCTTC	3 cut(s)	318, 1724, 2892
Ecl136II	GAGCTC	2 cut(s)	1257, 2094
Eco105I	TACGTA	1 cut(s)	67
Eco130I	CCWWGG	2 cut(s)	32, 102
Eco147I	AGGCCT	1 cut(s)	31
Eco24I	GRGCYC	4 cut(s)	1259, 2096, 2670, 2712
Eco32I	GATATC	1 cut(s)	1765
Eco47I	GGWCC	3 cut(s)	15, 1551, 1830
Eco53kI	GAGCTC	2 cut(s)	1257, 2094
Eco57I	CTGAAG	3 cut(s)	1166, 1839, 2085
Eco72I	CACGTG	1 cut(s)	398
Eco81I	CCTNAGG	1 cut(s)	946
Eco88I	CYCGRG	3 cut(s)	1856, 2789, 2863
EcoICRI	GAGCTC	2 cut(s)	1257, 2094
EcoNI	CCTNNNNNAGG	1 cut(s)	2112
EcoO109I	RGGNCCY	1 cut(s)	1551
EcoRI	GAATTC	1 cut(s)	639
EcoRII	CCWGG	3 cut(s)	166, 536, 1753
EcoRV	GATATC	1 cut(s)	1765
EcoT14I	CCWWGG	2 cut(s)	32, 102
EcoT38I	GRGCYC	4 cut(s)	1259, 2096, 2670, 2712
ErhI	CCWWGG	2 cut(s)	32, 102
FalI	AAGNNNNNCTT	2 cut(s)	155, 187
FaqI	GGGAC	4 cut(s)	1564, 2131, 2743, 2832
FauI	CCCGC	1 cut(s)	1822
FblI	GTMKAC	3 cut(s)	746, 1438, 2727
Fnu4HI	GCNGC	7 cut(s)	402, 1044, 1150, 1500, 2242, 2270, 2273
FriOI	GRGCYC	4 cut(s)	1259, 2096, 2670, 2712
Fsp4HI	GCNGC	7 cut(s)	402, 1044, 1150, 1500, 2242, 2270, 2273
FspBI	CTAG	7 cut(s)	33, 212, 630, 734, 1472, 2547, 2943
FspI	TGCGCA	1 cut(s)	2896
GlaI	GCGC	1 cut(s)	2896
GluI	GCNGC	7 cut(s)	402, 1044, 1150, 1500, 2242, 2270, 2273
GsuI	CTGGAG	2 cut(s)	57, 2027
HaeIII	GGCC	3 cut(s)	31, 352, 501
HapII	CCGG	4 cut(s)	1510, 2417, 2762, 2901
HgaI	GACGC	2 cut(s)	1559, 1890
HhaI	GCGC	1 cut(s)	2897
Hin1I	GRCGYC	1 cut(s)	1570
Hin6I	GCGC	1 cut(s)	2895
HinP1I	GCGC	1 cut(s)	2895
HincII	GTYRAC	4 cut(s)	826, 1375, 1794, 2728
HindII	GTYRAC	4 cut(s)	826, 1375, 1794, 2728
HpaI	GTTAAC	2 cut(s)	826, 1794
HpaII	CCGG	4 cut(s)	1510, 2417, 2762, 2901
HphI	GGTGA	8 cut(s)	91, 152, 275, 589, 962, 1493, 2564, 2585
Hpy166II	GTNNAC	9 cut(s)	64, 747, 826, 1375, 1439, 1794, 2131, 2728, 2747
Hpy8I	GTNNAC	9 cut(s)	64, 747, 826, 1375, 1439, 1794, 2131, 2728, 2747
Hpy99I	CGWCG	2 cut(s)	804, 1590
HpyCH4III	ACNGT	6 cut(s)	307, 529, 800, 2122, 2314, 2856
HpyCH4IV	ACGT	5 cut(s)	66, 367, 397, 1891, 2048
HpyF10VI	GCNNNNNNNGC	7 cut(s)	401, 763, 1049, 1112, 1858, 2155, 2865
HpySE526I	ACGT	5 cut(s)	66, 367, 397, 1891, 2048
Hsp92I	GRCGYC	1 cut(s)	1570
HspAI	GCGC	1 cut(s)	2895
KflI	GGGWCCC	1 cut(s)	1551
Kpn2I	TCCGGA	2 cut(s)	1509, 2416
KspAI	GTTAAC	2 cut(s)	826, 1794
Kzo9I	GATC	6 cut(s)	385, 1135, 1244, 1488, 2231, 2402
LguI	GCTCTTC	2 cut(s)	1724, 2892
LmnI	GCTCC	2 cut(s)	2208, 2497
Lsp1109I	GCAGC	4 cut(s)	413, 1030, 2281, 2284
MaeI	CTAG	7 cut(s)	33, 212, 630, 734, 1472, 2547, 2943
MaeII	ACGT	5 cut(s)	66, 367, 397, 1891, 2048
MalI	GATC	6 cut(s)	387, 1137, 1246, 1490, 2233, 2404
MbiI	CCGCTC	1 cut(s)	2244
MboI	GATC	6 cut(s)	385, 1135, 1244, 1488, 2231, 2402
MboII	GAAGA	9 cut(s)	268, 298, 335, 845, 1172, 1226, 1718, 1741, 2879
MflI	RGATCY	2 cut(s)	2231, 2402
MhlI	GDGCHC	4 cut(s)	1259, 2096, 2670, 2712
MlsI	TGGCCA	1 cut(s)	501
MluNI	TGGCCA	1 cut(s)	501
MlyI	GAGTC	6 cut(s)	79, 731, 1186, 1225, 1398, 2804
Mox20I	TGGCCA	1 cut(s)	501
MroI	TCCGGA	2 cut(s)	1509, 2416
MscI	TGGCCA	1 cut(s)	501
MslI	CAYNNNNRTG	3 cut(s)	1071, 1383, 1983
Msp20I	TGGCCA	1 cut(s)	501
MspA1I	CMGCKG	2 cut(s)	1499, 1817
MspCI	CTTAAG	1 cut(s)	2366
MspI	CCGG	4 cut(s)	1510, 2417, 2762, 2901
MspR9I	CCNGG	4 cut(s)	168, 538, 1755, 2762
Mva1269I	GAATGC	2 cut(s)	484, 1319
MvaI	CCWGG	3 cut(s)	168, 538, 1755
MwoI	GCNNNNNNNGC	7 cut(s)	401, 763, 1049, 1112, 1858, 2155, 2865
NciI	CCSGG	1 cut(s)	2762
NdeII	GATC	6 cut(s)	385, 1135, 1244, 1488, 2231, 2402
NheI	GCTAGC	1 cut(s)	211
NlaIV	GGNNCC	5 cut(s)	556, 1552, 1553, 2210, 2233
NmuCI	GTSAC	3 cut(s)	97, 1271, 2360
NsbI	TGCGCA	1 cut(s)	2896
NspI	RCATGY	5 cut(s)	211, 408, 855, 2745, 2753
NspV	TTCGAA	1 cut(s)	572
OliI	CACNNNNGTG	1 cut(s)	1383
PaeI	GCATGC	1 cut(s)	408
PaeR7I	CTCGAG	2 cut(s)	1856, 2863
PagI	TCATGA	3 cut(s)	2059, 2221, 2350
PaqCI	CACCTGC	1 cut(s)	2488
PceI	AGGCCT	1 cut(s)	31
PciI	ACATGT	2 cut(s)	851, 2741
PciSI	GCTCTTC	2 cut(s)	1724, 2892
PctI	GAATGC	2 cut(s)	484, 1319
PflMI	CCANNNNNTGG	2 cut(s)	817, 1547
PkrI	GCNGC	7 cut(s)	403, 1045, 1151, 1501, 2243, 2271, 2274
PleI	GAGTC	6 cut(s)	79, 731, 1185, 1225, 1397, 2803
PmaCI	CACGTG	1 cut(s)	398
PmlI	CACGTG	1 cut(s)	398
PpsI	GAGTC	6 cut(s)	79, 731, 1185, 1225, 1397, 2803
Ppu21I	YACGTR	2 cut(s)	67, 398
PpuMI	RGGWCCY	1 cut(s)	1551
PscI	ACATGT	2 cut(s)	851, 2741
PshBI	ATTAAT	1 cut(s)	1055
Psp124BI	GAGCTC	2 cut(s)	1259, 2096
Psp1406I	AACGTT	2 cut(s)	367, 1891
Psp5II	RGGWCCY	1 cut(s)	1551
Psp6I	CCWGG	3 cut(s)	166, 536, 1753
PspCI	CACGTG	1 cut(s)	398
PspGI	CCWGG	3 cut(s)	166, 536, 1753
PspN4I	GGNNCC	5 cut(s)	556, 1552, 1553, 2210, 2233
PspPI	GGNCC	3 cut(s)	15, 1551, 1830
PspPPI	RGGWCCY	1 cut(s)	1551
PspXI	VCTCGAGB	2 cut(s)	1856, 2863
PstI	CTGCAG	1 cut(s)	2485
PstNI	CAGNNNCTG	1 cut(s)	2108
PsuI	RGATCY	2 cut(s)	2231, 2402
RsaI	GTAC	7 cut(s)	65, 507, 531, 584, 1565, 2568, 2911
RsaNI	GTAC	7 cut(s)	64, 506, 530, 583, 1564, 2567, 2910
RseI	CAYNNNNRTG	3 cut(s)	1071, 1383, 1983
SacI	GAGCTC	2 cut(s)	1259, 2096
SalI	GTCGAC	1 cut(s)	2726
SapI	GCTCTTC	2 cut(s)	1724, 2892
SatI	GCNGC	7 cut(s)	402, 1044, 1150, 1500, 2242, 2270, 2273
Sau3AI	GATC	6 cut(s)	385, 1135, 1244, 1488, 2231, 2402
Sau96I	GGNCC	3 cut(s)	15, 1551, 1830
ScaI	AGTACT	1 cut(s)	531
SchI	GAGTC	6 cut(s)	79, 731, 1186, 1225, 1398, 2804
ScrFI	CCNGG	4 cut(s)	168, 538, 1755, 2762
SduI	GDGCHC	4 cut(s)	1259, 2096, 2670, 2712
SfcI	CTRYAG	1 cut(s)	2481
Sfr274I	CTCGAG	2 cut(s)	1856, 2863
SfuI	TTCGAA	1 cut(s)	572
SinI	GGWCC	3 cut(s)	15, 1551, 1830
SlaI	CTCGAG	2 cut(s)	1856, 2863
SmiMI	CAYNNNNRTG	3 cut(s)	1071, 1383, 1983
SmlI	CTYRAG	5 cut(s)	614, 1841, 1856, 2366, 2863
SmoI	CTYRAG	5 cut(s)	614, 1841, 1856, 2366, 2863
SnaBI	TACGTA	1 cut(s)	67
SpeI	ACTAGT	1 cut(s)	2546
SphI	GCATGC	1 cut(s)	408
SseBI	AGGCCT	1 cut(s)	31
SsiI	CCGC	7 cut(s)	999, 1149, 1499, 1815, 2242, 2447, 2921
SspI	AATATT	1 cut(s)	1408
SspMI	CTAG	7 cut(s)	33, 212, 630, 734, 1472, 2547, 2943
SstI	GAGCTC	2 cut(s)	1259, 2096
StuI	AGGCCT	1 cut(s)	31
StyD4I	CCNGG	4 cut(s)	166, 536, 1753, 2760
StyI	CCWWGG	2 cut(s)	32, 102
TaaI	ACNGT	6 cut(s)	307, 529, 800, 2122, 2314, 2856
TaiI	ACGT	5 cut(s)	69, 370, 400, 1894, 2051
TaqII	GACCGA	1 cut(s)	2555
TatI	WGTACW	5 cut(s)	505, 529, 582, 1563, 2566
TauI	GCSGC	3 cut(s)	1152, 1502, 2244
TseFI	GTSAC	3 cut(s)	97, 1271, 2360
TseI	GCWGC	4 cut(s)	401, 1043, 2269, 2272
Tsp45I	GTSAC	3 cut(s)	97, 1271, 2360
Van91I	CCANNNNNTGG	2 cut(s)	817, 1547
Vha464I	CTTAAG	1 cut(s)	2366
VpaK11BI	GGWCC	3 cut(s)	15, 1551, 1830
VspI	ATTAAT	1 cut(s)	1055
XagI	CCTNNNNNAGG	1 cut(s)	2112
XapI	RAATTY	7 cut(s)	176, 639, 980, 1429, 2306, 2532, 2779
XbaI	TCTAGA	2 cut(s)	733, 1471
XceI	RCATGY	5 cut(s)	211, 408, 855, 2745, 2753
XhoI	CTCGAG	2 cut(s)	1856, 2863
XmaJI	CCTAGG	1 cut(s)	32
XmiI	GTMKAC	3 cut(s)	746, 1438, 2727
XspI	CTAG	7 cut(s)	33, 212, 630, 734, 1472, 2547, 2943
ZrmI	AGTACT	1 cut(s)	531

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.