Plus-3 domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Plus-3 | PF03126 | 702 - 800 | 2.9e-14 | Plus-3 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1619 |
| AccI | GTMKAC | 1 cut(s) | 1149 |
| AccII | CGCG | 1 cut(s) | 2402 |
| AclI | AACGTT | 1 cut(s) | 854 |
| AclWI | GGATC | 2 cut(s) | 523, 1809 |
| AcoI | YGGCCR | 1 cut(s) | 1012 |
| AcsI | RAATTY | 1 cut(s) | 2466 |
| AcuI | CTGAAG | 5 cut(s) | 423, 1317, 1542, 1686, 2025 |
| AcyI | GRCGYC | 1 cut(s) | 667 |
| AfaI | GTAC | 3 cut(s) | 73, 1887, 2079 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 155, 1991, 2063, 2446 |
| AflII | CTTAAG | 1 cut(s) | 166 |
| AgeI | ACCGGT | 1 cut(s) | 1088 |
| AgsI | TTSAA | 4 cut(s) | 275, 389, 885, 2105 |
| AjnI | CCWGG | 3 cut(s) | 808, 1199, 2387 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2202, 2234 |
| Alw21I | GWGCWC | 1 cut(s) | 1875 |
| Alw26I | GTCTC | 6 cut(s) | 150, 468, 1383, 2174, 2275, 2346 |
| AlwI | GGATC | 2 cut(s) | 523, 1809 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1274, 2003 |
| Ama87I | CYCGRG | 1 cut(s) | 2198 |
| AoxI | GGCC | 4 cut(s) | 1012, 1548, 1646, 2385 |
| ApaI | GGGCCC | 1 cut(s) | 1650 |
| ApeKI | GCWGC | 7 cut(s) | 83, 113, 823, 1178, 1571, 1964, 2053 |
| ApoI | RAATTY | 1 cut(s) | 2466 |
| AsiGI | ACCGGT | 1 cut(s) | 1088 |
| AspLEI | GCGC | 2 cut(s) | 541, 2402 |
| AspS9I | GGNCC | 4 cut(s) | 647, 1265, 1646, 1647 |
| AsuHPI | GGTGA | 4 cut(s) | 650, 734, 740, 1433 |
| AvaI | CYCGRG | 1 cut(s) | 2198 |
| AvaII | GGWCC | 2 cut(s) | 647, 1265 |
| AxyI | CCTNAGG | 1 cut(s) | 1762 |
| BaeGI | GKGCMC | 1 cut(s) | 1650 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2061, 2094 |
| BalI | TGGCCA | 1 cut(s) | 1014 |
| BanII | GRGCYC | 2 cut(s) | 1650, 1875 |
| BbsI | GAAGAC | 6 cut(s) | 39, 282, 966, 1236, 1323, 1692 |
| Bbv12I | GWGCWC | 1 cut(s) | 1875 |
| BbvI | GCAGC | 7 cut(s) | 70, 100, 835, 1165, 1583, 1951, 2040 |
| BccI | CCATC | 7 cut(s) | 2, 496, 719, 1034, 1424, 1637, 2246 |
| BceAI | ACGGC | 3 cut(s) | 860, 1554, 2449 |
| BciT130I | CCWGG | 3 cut(s) | 810, 1201, 2389 |
| BcoDI | GTCTC | 6 cut(s) | 150, 468, 1383, 2174, 2275, 2346 |
| BfaI | CTAG | 4 cut(s) | 150, 651, 1728, 1883 |
| BfmI | CTRYAG | 2 cut(s) | 661, 1674 |
| BfrI | CTTAAG | 1 cut(s) | 166 |
| BglII | AGATCT | 2 cut(s) | 434, 1879 |
| BisI | GCNGC | 9 cut(s) | 84, 114, 824, 1179, 1572, 1965, 2054, 2122, 2425 |
| BlsI | GCNGC | 9 cut(s) | 85, 115, 825, 1180, 1573, 1966, 2055, 2123, 2426 |
| Bme1390I | CCNGG | 3 cut(s) | 810, 1201, 2389 |
| Bme18I | GGWCC | 2 cut(s) | 647, 1265 |
| BmeT110I | CYCGRG | 1 cut(s) | 2198 |
| BmgT120I | GGNCC | 4 cut(s) | 647, 1265, 1646, 1647 |
| BmiI | GGNNCC | 2 cut(s) | 658, 1648 |
| BmrFI | CCNGG | 3 cut(s) | 810, 1201, 2389 |
| BmrI | ACTGGG | 2 cut(s) | 1620, 1969 |
| BmsI | GCATC | 5 cut(s) | 112, 1067, 1761, 2086, 2445 |
| BmuI | ACTGGG | 2 cut(s) | 1620, 1969 |
| BpiI | GAAGAC | 6 cut(s) | 39, 282, 966, 1236, 1323, 1692 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2117 |
| BpuEI | CTTGAG | 5 cut(s) | 504, 775, 875, 2260, 2390 |
| BsaAI | YACGTR | 1 cut(s) | 292 |
| BsaHI | GRCGYC | 1 cut(s) | 667 |
| BsaI | GGTCTC | 2 cut(s) | 150, 2174 |
| BsaJI | CCNNGG | 2 cut(s) | 1199, 2081 |
| BsaWI | WCCGGW | 3 cut(s) | 68, 1088, 1657 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 155, 1991, 2063, 2446 |
| Bse118I | RCCGGY | 1 cut(s) | 1088 |
| Bse1I | ACTGG | 5 cut(s) | 1096, 1108, 1268, 1626, 1964 |
| Bse21I | CCTNAGG | 1 cut(s) | 1762 |
| Bse3DI | GCAATG | 4 cut(s) | 339, 1213, 1716, 1749 |
| BseBI | CCWGG | 3 cut(s) | 810, 1201, 2389 |
| BseDI | CCNNGG | 2 cut(s) | 1199, 2081 |
| BseGI | GGATG | 7 cut(s) | 428, 507, 577, 745, 1082, 1240, 2436 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 155, 1991, 2063, 2446 |
| BseMI | GCAATG | 4 cut(s) | 339, 1213, 1716, 1749 |
| BseMII | CTCAG | 8 cut(s) | 1532, 1578, 1767, 1776, 1860, 1888, 2108, 2357 |
| BseNI | ACTGG | 5 cut(s) | 1096, 1108, 1268, 1626, 1964 |
| BseRI | GAGGAG | 6 cut(s) | 51, 758, 833, 1802, 2387, 2390 |
| BseSI | GKGCMC | 1 cut(s) | 1650 |
| BseXI | GCAGC | 7 cut(s) | 70, 100, 835, 1165, 1583, 1951, 2040 |
| BsgI | GTGCAG | 1 cut(s) | 195 |
| Bsh1236I | CGCG | 1 cut(s) | 2402 |
| BshFI | GGCC | 4 cut(s) | 1014, 1550, 1648, 2387 |
| BshTI | ACCGGT | 1 cut(s) | 1088 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1875 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2198 |
| BsiSI | CCGG | 4 cut(s) | 69, 632, 1089, 1658 |
| BslFI | GGGAC | 3 cut(s) | 635, 2270, 2280 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 155, 1991, 2063, 2446 |
| BsmAI | GTCTC | 6 cut(s) | 150, 468, 1383, 2174, 2275, 2346 |
| BsmFI | GGGAC | 3 cut(s) | 635, 2270, 2280 |
| BsmI | GAATGC | 2 cut(s) | 1786, 1984 |
| BsnI | GGCC | 4 cut(s) | 1014, 1550, 1648, 2387 |
| Bso31I | GGTCTC | 2 cut(s) | 150, 2174 |
| BsoBI | CYCGRG | 1 cut(s) | 2198 |
| Bsp120I | GGGCCC | 1 cut(s) | 1646 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1650, 1875 |
| Bsp143I | GATC | 7 cut(s) | 286, 316, 434, 515, 553, 1801, 1879 |
| BspANI | GGCC | 4 cut(s) | 1014, 1550, 1648, 2387 |
| BspCNI | CTCAG | 8 cut(s) | 1531, 1577, 1768, 1775, 1861, 1887, 2109, 2356 |
| BspFNI | CGCG | 1 cut(s) | 2402 |
| BspHI | TCATGA | 1 cut(s) | 909 |
| BspLI | GGNNCC | 2 cut(s) | 658, 1648 |
| BspPI | GGATC | 2 cut(s) | 523, 1809 |
| BspQI | GCTCTTC | 1 cut(s) | 1398 |
| BspTI | CTTAAG | 1 cut(s) | 166 |
| BspTNI | GGTCTC | 2 cut(s) | 150, 2174 |
| BsrDI | GCAATG | 4 cut(s) | 339, 1213, 1716, 1749 |
| BsrFI | RCCGGY | 1 cut(s) | 1088 |
| BsrI | ACTGG | 5 cut(s) | 1096, 1108, 1268, 1626, 1964 |
| BssAI | RCCGGY | 1 cut(s) | 1088 |
| BssECI | CCNNGG | 2 cut(s) | 1199, 2081 |
| BssMI | GATC | 7 cut(s) | 286, 316, 434, 515, 553, 1801, 1879 |
| BssNI | GRCGYC | 1 cut(s) | 667 |
| BssT1I | CCWWGG | 1 cut(s) | 2081 |
| Bst2UI | CCWGG | 3 cut(s) | 810, 1201, 2389 |
| Bst4CI | ACNGT | 4 cut(s) | 158, 495, 1329, 1666 |
| Bst6I | CTCTTC | 2 cut(s) | 1398, 1906 |
| BstACI | GRCGYC | 1 cut(s) | 667 |
| BstAFI | CTTAAG | 1 cut(s) | 166 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 593 |
| BstBAI | YACGTR | 1 cut(s) | 292 |
| BstC8I | GCNNGC | 2 cut(s) | 1602, 2245 |
| BstF5I | GGATG | 7 cut(s) | 428, 507, 577, 745, 1082, 1240, 2436 |
| BstFNI | CGCG | 1 cut(s) | 2402 |
| BstHHI | GCGC | 2 cut(s) | 541, 2402 |
| BstKTI | GATC | 7 cut(s) | 289, 319, 437, 518, 556, 1804, 1882 |
| BstMAI | GTCTC | 6 cut(s) | 150, 468, 1383, 2174, 2275, 2346 |
| BstMBI | GATC | 7 cut(s) | 286, 316, 434, 515, 553, 1801, 1879 |
| BstNI | CCWGG | 3 cut(s) | 810, 1201, 2389 |
| BstNSI | RCATGY | 3 cut(s) | 609, 1419, 1974 |
| BstSCI | CCNGG | 3 cut(s) | 808, 1199, 2387 |
| BstSFI | CTRYAG | 2 cut(s) | 661, 1674 |
| BstSLI | GKGCMC | 1 cut(s) | 1650 |
| BstUI | CGCG | 1 cut(s) | 2402 |
| BstV1I | GCAGC | 7 cut(s) | 70, 100, 835, 1165, 1583, 1951, 2040 |
| BstV2I | GAAGAC | 6 cut(s) | 39, 282, 966, 1236, 1323, 1692 |
| BstX2I | RGATCY | 4 cut(s) | 434, 515, 1801, 1879 |
| BstYI | RGATCY | 4 cut(s) | 434, 515, 1801, 1879 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1762 |
| BsuRI | GGCC | 4 cut(s) | 1014, 1550, 1648, 2387 |
| BtsCI | GGATG | 7 cut(s) | 428, 507, 577, 745, 1082, 1240, 2436 |
| BtsIMutI | CAGTG | 3 cut(s) | 1275, 1662, 1957 |
| Cac8I | GCNNGC | 2 cut(s) | 1602, 2245 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1274, 2003 |
| CciI | TCATGA | 1 cut(s) | 909 |
| CfoI | GCGC | 2 cut(s) | 541, 2402 |
| Cfr10I | RCCGGY | 1 cut(s) | 1088 |
| Cfr13I | GGNCC | 4 cut(s) | 647, 1265, 1646, 1647 |
| CseI | GACGC | 3 cut(s) | 656, 1577, 1911 |
| Csp6I | GTAC | 3 cut(s) | 72, 1886, 2078 |
| CspAI | ACCGGT | 1 cut(s) | 1088 |
| CviQI | GTAC | 3 cut(s) | 72, 1886, 2078 |
| DpnI | GATC | 7 cut(s) | 288, 318, 436, 517, 555, 1803, 1881 |
| DpnII | GATC | 7 cut(s) | 286, 316, 434, 515, 553, 1801, 1879 |
| EaeI | YGGCCR | 1 cut(s) | 1012 |
| Eam1104I | CTCTTC | 2 cut(s) | 1398, 1906 |
| EarI | CTCTTC | 2 cut(s) | 1398, 1906 |
| EciI | GGCGGA | 1 cut(s) | 2462 |
| Ecl136II | GAGCTC | 1 cut(s) | 1873 |
| Eco130I | CCWWGG | 1 cut(s) | 2081 |
| Eco147I | AGGCCT | 1 cut(s) | 2387 |
| Eco24I | GRGCYC | 2 cut(s) | 1650, 1875 |
| Eco31I | GGTCTC | 2 cut(s) | 150, 2174 |
| Eco32I | GATATC | 2 cut(s) | 181, 921 |
| Eco47I | GGWCC | 2 cut(s) | 647, 1265 |
| Eco53kI | GAGCTC | 1 cut(s) | 1873 |
| Eco57I | CTGAAG | 5 cut(s) | 423, 1317, 1542, 1686, 2025 |
| Eco81I | CCTNAGG | 1 cut(s) | 1762 |
| Eco88I | CYCGRG | 1 cut(s) | 2198 |
| EcoICRI | GAGCTC | 1 cut(s) | 1873 |
| EcoRII | CCWGG | 3 cut(s) | 808, 1199, 2387 |
| EcoRV | GATATC | 2 cut(s) | 181, 921 |
| EcoT14I | CCWWGG | 1 cut(s) | 2081 |
| EcoT22I | ATGCAT | 1 cut(s) | 1937 |
| EcoT38I | GRGCYC | 2 cut(s) | 1650, 1875 |
| ErhI | CCWWGG | 1 cut(s) | 2081 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2202, 2234, 2352, 2384 |
| FaqI | GGGAC | 3 cut(s) | 635, 2270, 2280 |
| FauI | CCCGC | 2 cut(s) | 772, 2395 |
| FblI | GTMKAC | 1 cut(s) | 1149 |
| Fnu4HI | GCNGC | 9 cut(s) | 84, 114, 824, 1179, 1572, 1965, 2054, 2122, 2425 |
| FokI | GGATG | 7 cut(s) | 435, 514, 584, 752, 1089, 1247, 2423 |
| FriOI | GRGCYC | 2 cut(s) | 1650, 1875 |
| Fsp4HI | GCNGC | 9 cut(s) | 84, 114, 824, 1179, 1572, 1965, 2054, 2122, 2425 |
| FspBI | CTAG | 4 cut(s) | 150, 651, 1728, 1883 |
| GlaI | GCGC | 2 cut(s) | 540, 2401 |
| GluI | GCNGC | 9 cut(s) | 84, 114, 824, 1179, 1572, 1965, 2054, 2122, 2425 |
| HaeIII | GGCC | 4 cut(s) | 1014, 1550, 1648, 2387 |
| HapII | CCGG | 4 cut(s) | 69, 632, 1089, 1658 |
| HgaI | GACGC | 3 cut(s) | 656, 1577, 1911 |
| HhaI | GCGC | 2 cut(s) | 541, 2402 |
| Hin1I | GRCGYC | 1 cut(s) | 667 |
| Hin6I | GCGC | 2 cut(s) | 539, 2400 |
| HinP1I | GCGC | 2 cut(s) | 539, 2400 |
| HincII | GTYRAC | 3 cut(s) | 879, 1033, 1150 |
| HindII | GTYRAC | 3 cut(s) | 879, 1033, 1150 |
| HindIII | AAGCTT | 3 cut(s) | 163, 696, 2296 |
| HinfI | GANTC | 9 cut(s) | 52, 250, 563, 939, 1048, 1204, 1586, 1697, 2339 |
| HpaII | CCGG | 4 cut(s) | 69, 632, 1089, 1658 |
| HphI | GGTGA | 4 cut(s) | 650, 734, 740, 1433 |
| Hpy166II | GTNNAC | 5 cut(s) | 325, 879, 1033, 1150, 1841 |
| Hpy8I | GTNNAC | 5 cut(s) | 325, 879, 1033, 1150, 1841 |
| Hpy99I | CGWCG | 5 cut(s) | 60, 672, 1151, 2435, 2446 |
| HpyAV | CCTTC | 9 cut(s) | 455, 521, 605, 916, 1057, 1679, 2000, 2168, 2207 |
| HpyCH4III | ACNGT | 4 cut(s) | 158, 495, 1329, 1666 |
| HpyCH4IV | ACGT | 5 cut(s) | 291, 854, 1345, 2076, 2130 |
| HpyCH4V | TGCA | 9 cut(s) | 86, 92, 176, 771, 1080, 1189, 1784, 1935, 1967 |
| HpySE526I | ACGT | 5 cut(s) | 291, 854, 1345, 2076, 2130 |
| Hsp92I | GRCGYC | 1 cut(s) | 667 |
| HspAI | GCGC | 2 cut(s) | 539, 2400 |
| Kzo9I | GATC | 7 cut(s) | 286, 316, 434, 515, 553, 1801, 1879 |
| LguI | GCTCTTC | 1 cut(s) | 1398 |
| LmnI | GCTCC | 4 cut(s) | 820, 1186, 1987, 2000 |
| Lsp1109I | GCAGC | 7 cut(s) | 70, 100, 835, 1165, 1583, 1951, 2040 |
| LweI | GCATC | 5 cut(s) | 112, 1067, 1761, 2086, 2445 |
| MaeI | CTAG | 4 cut(s) | 150, 651, 1728, 1883 |
| MaeII | ACGT | 5 cut(s) | 291, 854, 1345, 2076, 2130 |
| MaeIII | GTNAC | 3 cut(s) | 1858, 1955, 2323 |
| MalI | GATC | 7 cut(s) | 288, 318, 436, 517, 555, 1803, 1881 |
| MboI | GATC | 7 cut(s) | 286, 316, 434, 515, 553, 1801, 1879 |
| MfeI | CAATTG | 1 cut(s) | 1043 |
| MflI | RGATCY | 4 cut(s) | 434, 515, 1801, 1879 |
| MhlI | GDGCHC | 2 cut(s) | 1650, 1875 |
| MlsI | TGGCCA | 1 cut(s) | 1014 |
| MluCI | AATT | 9 cut(s) | 134, 203, 302, 913, 964, 1043, 1806, 2301, 2466 |
| MluNI | TGGCCA | 1 cut(s) | 1014 |
| MlyI | GAGTC | 4 cut(s) | 61, 1057, 1706, 2348 |
| MmeI | TCCRAC | 1 cut(s) | 2441 |
| Mox20I | TGGCCA | 1 cut(s) | 1014 |
| Mph1103I | ATGCAT | 1 cut(s) | 1937 |
| MscI | TGGCCA | 1 cut(s) | 1014 |
| MslI | CAYNNNNRTG | 2 cut(s) | 294, 1898 |
| Msp20I | TGGCCA | 1 cut(s) | 1014 |
| MspA1I | CMGCKG | 1 cut(s) | 826 |
| MspCI | CTTAAG | 1 cut(s) | 166 |
| MspI | CCGG | 4 cut(s) | 69, 632, 1089, 1658 |
| MspR9I | CCNGG | 3 cut(s) | 810, 1201, 2389 |
| MunI | CAATTG | 1 cut(s) | 1043 |
| Mva1269I | GAATGC | 2 cut(s) | 1786, 1984 |
| MvaI | CCWGG | 3 cut(s) | 810, 1201, 2389 |
| MvnI | CGCG | 1 cut(s) | 2402 |
| NdeII | GATC | 7 cut(s) | 286, 316, 434, 515, 553, 1801, 1879 |
| NlaIV | GGNNCC | 2 cut(s) | 658, 1648 |
| NmuCI | GTSAC | 2 cut(s) | 1955, 2323 |
| NsiI | ATGCAT | 1 cut(s) | 1937 |
| NspI | RCATGY | 3 cut(s) | 609, 1419, 1974 |
| PagI | TCATGA | 1 cut(s) | 909 |
| PceI | AGGCCT | 1 cut(s) | 2387 |
| PciSI | GCTCTTC | 1 cut(s) | 1398 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 297 |
| PctI | GAATGC | 2 cut(s) | 1786, 1984 |
| PfeI | GAWTC | 5 cut(s) | 250, 563, 939, 1204, 1586 |
| PflFI | GACNNNGTC | 1 cut(s) | 1664 |
| PinAI | ACCGGT | 1 cut(s) | 1088 |
| PkrI | GCNGC | 9 cut(s) | 85, 115, 825, 1180, 1573, 1966, 2055, 2123, 2426 |
| PleI | GAGTC | 4 cut(s) | 60, 1056, 1705, 2347 |
| PpsI | GAGTC | 4 cut(s) | 60, 1056, 1705, 2347 |
| Ppu21I | YACGTR | 1 cut(s) | 292 |
| PsiI | TTATAA | 1 cut(s) | 1619 |
| Psp124BI | GAGCTC | 1 cut(s) | 1875 |
| Psp1406I | AACGTT | 1 cut(s) | 854 |
| Psp6I | CCWGG | 3 cut(s) | 808, 1199, 2387 |
| PspGI | CCWGG | 3 cut(s) | 808, 1199, 2387 |
| PspN4I | GGNNCC | 2 cut(s) | 658, 1648 |
| PspOMI | GGGCCC | 1 cut(s) | 1646 |
| PspPI | GGNCC | 4 cut(s) | 647, 1265, 1646, 1647 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1274, 2003 |
| PsuI | RGATCY | 4 cut(s) | 434, 515, 1801, 1879 |
| PsyI | GACNNNGTC | 1 cut(s) | 1664 |
| PvuII | CAGCTG | 1 cut(s) | 826 |
| RsaI | GTAC | 3 cut(s) | 73, 1887, 2079 |
| RsaNI | GTAC | 3 cut(s) | 72, 1886, 2078 |
| RseI | CAYNNNNRTG | 2 cut(s) | 294, 1898 |
| SacI | GAGCTC | 1 cut(s) | 1875 |
| SalI | GTCGAC | 1 cut(s) | 1148 |
| SapI | GCTCTTC | 1 cut(s) | 1398 |
| SatI | GCNGC | 9 cut(s) | 84, 114, 824, 1179, 1572, 1965, 2054, 2122, 2425 |
| Sau3AI | GATC | 7 cut(s) | 286, 316, 434, 515, 553, 1801, 1879 |
| Sau96I | GGNCC | 4 cut(s) | 647, 1265, 1646, 1647 |
| SchI | GAGTC | 4 cut(s) | 61, 1057, 1706, 2348 |
| ScrFI | CCNGG | 3 cut(s) | 810, 1201, 2389 |
| SduI | GDGCHC | 2 cut(s) | 1650, 1875 |
| SfaNI | GCATC | 5 cut(s) | 112, 1067, 1761, 2086, 2445 |
| SfcI | CTRYAG | 2 cut(s) | 661, 1674 |
| SinI | GGWCC | 2 cut(s) | 647, 1265 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 294, 1898 |
| SmlI | CTYRAG | 6 cut(s) | 166, 519, 790, 890, 2275, 2369 |
| SmoI | CTYRAG | 6 cut(s) | 166, 519, 790, 890, 2275, 2369 |
| Sse9I | AATT | 9 cut(s) | 134, 203, 302, 913, 964, 1043, 1806, 2301, 2466 |
| SseBI | AGGCCT | 1 cut(s) | 2387 |
| SspMI | CTAG | 4 cut(s) | 150, 651, 1728, 1883 |
| SstI | GAGCTC | 1 cut(s) | 1875 |
| StuI | AGGCCT | 1 cut(s) | 2387 |
| StyD4I | CCNGG | 3 cut(s) | 808, 1199, 2387 |
| StyI | CCWWGG | 1 cut(s) | 2081 |
| TaaI | ACNGT | 4 cut(s) | 158, 495, 1329, 1666 |
| TaiI | ACGT | 5 cut(s) | 294, 857, 1348, 2079, 2133 |
| TaqI | TCGA | 4 cut(s) | 50, 300, 1149, 2172 |
| TasI | AATT | 9 cut(s) | 134, 203, 302, 913, 964, 1043, 1806, 2301, 2466 |
| TatI | WGTACW | 1 cut(s) | 1885 |
| TauI | GCSGC | 2 cut(s) | 2124, 2427 |
| TfiI | GAWTC | 5 cut(s) | 250, 563, 939, 1204, 1586 |
| TscAI | CASTG | 3 cut(s) | 1275, 1669, 1964 |
| TseFI | GTSAC | 2 cut(s) | 1955, 2323 |
| TseI | GCWGC | 7 cut(s) | 83, 113, 823, 1178, 1571, 1964, 2053 |
| Tsp45I | GTSAC | 2 cut(s) | 1955, 2323 |
| TspGWI | ACGGA | 1 cut(s) | 1606 |
| TspRI | CASTG | 3 cut(s) | 1275, 1669, 1964 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1664 |
| Vha464I | CTTAAG | 1 cut(s) | 166 |
| VpaK11BI | GGWCC | 2 cut(s) | 647, 1265 |
| XapI | RAATTY | 1 cut(s) | 2466 |
| XceI | RCATGY | 3 cut(s) | 609, 1419, 1974 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 335, 478 |
| XmiI | GTMKAC | 1 cut(s) | 1149 |
| XspI | CTAG | 4 cut(s) | 150, 651, 1728, 1883 |
| Zsp2I | ATGCAT | 1 cut(s) | 1937 |