Rorug03G0330900

Zinc knuckle (CCHC-type) family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0001074
Physical Location & Seq
Forward (+)
38390454 .. 38399248
8795 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0330900.1

Sequence Viewer

Length: 1422 bp
ATGGAGGAGTATGAGGCAGAGCCACCCCCTCCCGGCGTTCCACGTTCCTCACTGCCTCAAATTGAAATTGCTGCGCAAAATGTGGTGTTGCACGAACAAGAGATTTCTACGCAGAATATCATACGAACTCAAAGAGAAGCAAGAGCTGTGGGTGGCTCTCCTCCTAAGGATGATTCGGACATCTTCTCTGAACGCCTTGATCCCAGCGCTCTCAAGGAGCATCTATTGAGGATGACCTCGGAACATCGAGCTCTTATGGCTGTAAAACGTGGCAAATCATCTACTGTCCTTGATCAACAAGGTAACTTAGAAATTGGAAACGGCTATGGTGTACCAGGCGGAGGTGCTTATCAGGGTGGGACGAGGTCCAATAGTACTCCGCCTAGGAATTTGGGAGTTGGAATCAATGAAATGGGACAGATGAACTTTGAGCGTGATAAGGACTTTGAACAGAAACCTCCATCTAAAGAATTGTCCGAGTATCTTAAGAAAAAGTTGCGAGATAGGGGTATTCTTAAAGATGACTCAAACAAAGACGACCTTAAAATAAAAAGTGCTTCAGCTCAACAGATGGAATGTGGGAAATTGCCTCCTGGATGGGTGGCGGCAAAAGACCCTGCAAGTGGTGCTTTGTATTATTTTAATGAGACCACAGGGAGGAGTCAATGGGAAAAGCCTGCTGAAACATCTTCTAATACACCACTTCCATCACCTTTATCCCTTCCGGAAGATTGGGTGGAGGCTTTGGATGAAACGACAGGTCACAAGTATTACTACAATATGAAGACACATGTCTCACAATGGAAACACCCTGACTCATCACAGCAAGCTGCATCTCGACATTTTGTTCATTGGGATGAACAATCATCTGAGCTACAAGTAGAAAAGGATCAATTATCCAAACAAAAAAGATGCATGGGTTGTGGTGGATGGGGAGTAGGCCTTGTTCAGACGTGGGATTACTGCAATCATTGCACGAGAATTCTTGGTCTTCCACAAAGCCAGTACATGACAACTAGCTTGAATTTTAATCACCAGACCACAAGTCCTGCAGATACCAAAGGTGATTTGGACAAAAAGGCCACCATGCAGAGGTCTAATCAGAAACCTCCAATGGGAAAAGGGAATAGAAGAGAGAGTAGGAAACGTGCACACTCTGAGGATGATGAATTGGATCCTATGGACCCCAGCTCTTATTCAGATGCTCCCCGTGGTGGCTGGGTGGTAGGCCTCAAAGGAGTGCAACCACGAGCAGCTGATACCACTGCTACAGGTCCTCTCTTCCAACAGCGTCCATACCCATCACCAGGTGCTGTCTTGAGAAAGAATGCTGAAATTGCTTCACAAACCAAGTCAAGCTCACATTTAGCGCCTATATCCAAAAGAGGGGACGGGAGTGATGGACTTGGTGATGCTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Plus-3

Protein Analysis

473

Amino Acids

52.2

Weight (kDa)

6.49

Isoelectric Point (pI)

51.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WW PF00397 196 - 226 5.8e-14 WW domain
WW PF00397 241 - 271 9.3e-12 WW domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 75
AccIII TCCGGA 1 cut(s) 724
AciI CCGC 3 cut(s) 339, 380, 605
AclWI GGATC 4 cut(s) 194, 897, 1169, 1182
AcsI RAATTY 3 cut(s) 388, 981, 1024
AcuI CTGAAG 1 cut(s) 543
AdeI CACNNNGTG 1 cut(s) 1310
AfaI GTAC 3 cut(s) 333, 376, 1007
AfeI AGCGCT 1 cut(s) 208
AfiI CCNNNNNNNGG 9 cut(s) 32, 341, 623, 657, 1092, 1115, 1214, 1307, 1386
AflII CTTAAG 1 cut(s) 485
AflIII ACRYGT 1 cut(s) 790
AgsI TTSAA 3 cut(s) 65, 449, 1024
AhdI GACNNNNNGTC 1 cut(s) 1044
AjiI CACGTC 1 cut(s) 954
AjnI CCWGG 3 cut(s) 334, 592, 1306
AluBI AGCT 9 cut(s) 146, 251, 563, 830, 874, 1020, 1191, 1256, 1359
AluI AGCT 9 cut(s) 146, 251, 563, 830, 874, 1020, 1191, 1256, 1359
Alw21I GWGCWC 2 cut(s) 253, 1153
Alw26I GTCTC 2 cut(s) 641, 799
Alw44I GTGCAC 1 cut(s) 1149
AlwI GGATC 4 cut(s) 194, 897, 1169, 1182
AlwNI CAGNNNCTG 1 cut(s) 1313
Aor13HI TCCGGA 1 cut(s) 724
Aor51HI AGCGCT 1 cut(s) 208
AoxI GGCC 3 cut(s) 940, 1080, 1228
ApaLI GTGCAC 1 cut(s) 1149
ApeKI GCWGC 3 cut(s) 71, 830, 1253
ApoI RAATTY 3 cut(s) 388, 981, 1024
AspA2I CCTAGG 1 cut(s) 383
AspLEI GCGC 3 cut(s) 76, 209, 1372
AspS9I GGNCC 3 cut(s) 366, 1183, 1274
AsuC2I CCSGG 1 cut(s) 33
AsuHPI GGTGA 5 cut(s) 702, 1025, 1076, 1296, 1421
AvaII GGWCC 3 cut(s) 366, 1183, 1274
AvrII CCTAGG 1 cut(s) 383
AxyI CCTNAGG 1 cut(s) 165
BaeGI GKGCMC 1 cut(s) 1153
BamHI GGATCC 1 cut(s) 1174
BanII GRGCYC 1 cut(s) 253
BauI CACGAG 2 cut(s) 976, 1248
BbsI GAAGAC 2 cut(s) 791, 983
Bbv12I GWGCWC 2 cut(s) 253, 1153
BbvI GCAGC 3 cut(s) 58, 817, 1265
BccI CCATC 7 cut(s) 469, 565, 591, 715, 924, 1309, 1394
BceAI ACGGC 1 cut(s) 337
BciT130I CCWGG 3 cut(s) 336, 594, 1308
BclI TGATCA 1 cut(s) 292
BcnI CCSGG 1 cut(s) 33
BcoDI GTCTC 2 cut(s) 641, 799
BfaI CTAG 2 cut(s) 384, 1017
BfmI CTRYAG 2 cut(s) 1050, 1269
BfoI RGCGCY 2 cut(s) 210, 1373
BfrI CTTAAG 1 cut(s) 485
BisI GCNGC 4 cut(s) 72, 606, 831, 1254
BlnI CCTAGG 1 cut(s) 383
BlsI GCNGC 4 cut(s) 73, 607, 832, 1255
BmcAI AGTACT 1 cut(s) 376
Bme1390I CCNGG 4 cut(s) 33, 336, 594, 1308
Bme18I GGWCC 3 cut(s) 366, 1183, 1274
BmeRI GACNNNNNGTC 1 cut(s) 1044
BmgBI CACGTC 1 cut(s) 954
BmgT120I GGNCC 3 cut(s) 366, 1183, 1274
BmiI GGNNCC 2 cut(s) 1176, 1185
BmrFI CCNGG 4 cut(s) 33, 336, 594, 1308
BmsI GCATC 5 cut(s) 229, 842, 902, 1192, 1402
BoxI GACNNNNGTC 1 cut(s) 791
BpiI GAAGAC 2 cut(s) 791, 983
BpuEI CTTGAG 2 cut(s) 197, 1339
BpuMI CCSGG 1 cut(s) 33
BsaI GGTCTC 1 cut(s) 641
BsaJI CCNNGG 3 cut(s) 237, 383, 1210
BsaWI WCCGGW 1 cut(s) 724
Bsc4I CCNNNNNNNGG 9 cut(s) 32, 341, 623, 657, 1092, 1115, 1214, 1307, 1386
Bse1I ACTGG 1 cut(s) 1003
Bse21I CCTNAGG 1 cut(s) 165
Bse3DI GCAATG 1 cut(s) 970
BseAI TCCGGA 1 cut(s) 724
BseBI CCWGG 3 cut(s) 336, 594, 1308
BseDI CCNNGG 3 cut(s) 237, 383, 1210
BseGI GGATG 7 cut(s) 175, 237, 602, 754, 862, 935, 1168
BseLI CCNNNNNNNGG 9 cut(s) 32, 341, 623, 657, 1092, 1115, 1214, 1307, 1386
BseMI GCAATG 1 cut(s) 970
BseMII CTCAG 2 cut(s) 861, 1149
BseNI ACTGG 1 cut(s) 1003
BseRI GAGGAG 3 cut(s) 20, 150, 673
BseSI GKGCMC 1 cut(s) 1153
BseXI GCAGC 3 cut(s) 58, 817, 1265
BseYI CCCAGC 3 cut(s) 203, 1187, 1218
BshFI GGCC 3 cut(s) 942, 1082, 1230
BsiHKAI GWGCWC 2 cut(s) 253, 1153
BsiSI CCGG 2 cut(s) 33, 725
BslFI GGGAC 3 cut(s) 373, 429, 1403
BslI CCNNNNNNNGG 9 cut(s) 32, 341, 623, 657, 1092, 1115, 1214, 1307, 1386
BsmAI GTCTC 2 cut(s) 641, 799
BsmFI GGGAC 3 cut(s) 373, 429, 1403
BsmI GAATGC 1 cut(s) 1333
BsnI GGCC 3 cut(s) 942, 1082, 1230
Bso31I GGTCTC 1 cut(s) 641
Bsp1286I GDGCHC 2 cut(s) 253, 1153
Bsp13I TCCGGA 1 cut(s) 724
Bsp143I GATC 4 cut(s) 199, 292, 889, 1174
BspACI CCGC 3 cut(s) 339, 380, 605
BspANI GGCC 3 cut(s) 942, 1082, 1230
BspCNI CTCAG 2 cut(s) 862, 1150
BspEI TCCGGA 1 cut(s) 724
BspLI GGNNCC 2 cut(s) 1176, 1185
BspMAI CTGCAG 1 cut(s) 1054
BspPI GGATC 4 cut(s) 194, 897, 1169, 1182
BspTI CTTAAG 1 cut(s) 485
BspTNI GGTCTC 1 cut(s) 641
BsrDI GCAATG 1 cut(s) 970
BsrI ACTGG 1 cut(s) 1003
BssECI CCNNGG 3 cut(s) 237, 383, 1210
BssMI GATC 4 cut(s) 199, 292, 889, 1174
BssSI CACGAG 2 cut(s) 976, 1248
BssT1I CCWWGG 1 cut(s) 383
Bst2BI CACGAG 2 cut(s) 976, 1248
Bst2UI CCWGG 3 cut(s) 336, 594, 1308
Bst4CI ACNGT 1 cut(s) 286
Bst6I CTCTTC 2 cut(s) 1126, 1286
BstAFI CTTAAG 1 cut(s) 485
BstAPI GCANNNNNTGC 2 cut(s) 626, 972
BstC8I GCNNGC 2 cut(s) 678, 828
BstDEI CTNAG 4 cut(s) 165, 307, 870, 1158
BstDSI CCRYGG 1 cut(s) 1210
BstF5I GGATG 7 cut(s) 175, 237, 602, 754, 862, 935, 1168
BstH2I RGCGCY 2 cut(s) 210, 1373
BstHHI GCGC 3 cut(s) 76, 209, 1372
BstKTI GATC 4 cut(s) 202, 295, 892, 1177
BstMAI GTCTC 2 cut(s) 641, 799
BstMBI GATC 4 cut(s) 199, 292, 889, 1174
BstMWI GCNNNNNNNGC 4 cut(s) 257, 626, 972, 1337
BstNI CCWGG 3 cut(s) 336, 594, 1308
BstNSI RCATGY 1 cut(s) 794
BstPAI GACNNNNGTC 1 cut(s) 791
BstSCI CCNGG 4 cut(s) 31, 334, 592, 1306
BstSFI CTRYAG 2 cut(s) 1050, 1269
BstSLI GKGCMC 1 cut(s) 1153
BstV1I GCAGC 3 cut(s) 58, 817, 1265
BstV2I GAAGAC 2 cut(s) 791, 983
BstX2I RGATCY 1 cut(s) 1174
BstYI RGATCY 1 cut(s) 1174
Bsu36I CCTNAGG 1 cut(s) 165
BsuRI GGCC 3 cut(s) 942, 1082, 1230
BtgI CCRYGG 1 cut(s) 1210
BtrI CACGTC 1 cut(s) 954
BtsCI GGATG 7 cut(s) 175, 237, 602, 754, 862, 935, 1168
BtsI GCAGTG 2 cut(s) 50, 1263
BtsIMutI CAGTG 2 cut(s) 50, 1263
Cac8I GCNNGC 2 cut(s) 678, 828
CaiI CAGNNNCTG 1 cut(s) 1313
CfoI GCGC 3 cut(s) 76, 209, 1372
Cfr13I GGNCC 3 cut(s) 366, 1183, 1274
CseI GACGC 1 cut(s) 1280
CsiI ACCWGGT 1 cut(s) 1306
Csp6I GTAC 3 cut(s) 332, 375, 1006
CspCI CAANNNNNGTGG 2 cut(s) 129, 164
CviAII CATG 4 cut(s) 791, 916, 1009, 1087
CviQI GTAC 3 cut(s) 332, 375, 1006
DdeI CTNAG 4 cut(s) 165, 307, 870, 1158
DpnI GATC 4 cut(s) 201, 294, 891, 1176
DpnII GATC 4 cut(s) 199, 292, 889, 1174
DraIII CACNNNGTG 1 cut(s) 1310
DriI GACNNNNNGTC 1 cut(s) 1044
Eam1104I CTCTTC 2 cut(s) 1126, 1286
Eam1105I GACNNNNNGTC 1 cut(s) 1044
EarI CTCTTC 2 cut(s) 1126, 1286
EciI GGCGGA 2 cut(s) 354, 369
Ecl136II GAGCTC 1 cut(s) 251
Eco130I CCWWGG 1 cut(s) 383
Eco147I AGGCCT 2 cut(s) 942, 1230
Eco24I GRGCYC 1 cut(s) 253
Eco31I GGTCTC 1 cut(s) 641
Eco47I GGWCC 3 cut(s) 366, 1183, 1274
Eco47III AGCGCT 1 cut(s) 208
Eco53kI GAGCTC 1 cut(s) 251
Eco57I CTGAAG 1 cut(s) 543
Eco81I CCTNAGG 1 cut(s) 165
EcoICRI GAGCTC 1 cut(s) 251
EcoO109I RGGNCCY 1 cut(s) 1274
EcoRI GAATTC 1 cut(s) 981
EcoRII CCWGG 3 cut(s) 334, 592, 1306
EcoT14I CCWWGG 1 cut(s) 383
EcoT22I ATGCAT 1 cut(s) 917
EcoT38I GRGCYC 1 cut(s) 253
ErhI CCWWGG 1 cut(s) 383
FaeI CATG 4 cut(s) 794, 919, 1012, 1090
FalI AAGNNNNNCTT 4 cut(s) 525, 557, 613, 645
FaqI GGGAC 3 cut(s) 373, 429, 1403
FatI CATG 4 cut(s) 790, 915, 1008, 1086
FbaI TGATCA 1 cut(s) 292
Fnu4HI GCNGC 4 cut(s) 72, 606, 831, 1254
FokI GGATG 7 cut(s) 182, 244, 609, 761, 869, 942, 1175
FriOI GRGCYC 1 cut(s) 253
Fsp4HI GCNGC 4 cut(s) 72, 606, 831, 1254
FspBI CTAG 2 cut(s) 384, 1017
FspI TGCGCA 1 cut(s) 75
GlaI GCGC 3 cut(s) 75, 208, 1371
GluI GCNGC 4 cut(s) 72, 606, 831, 1254
GsaI CCCAGC 3 cut(s) 207, 1191, 1222
HaeII RGCGCY 2 cut(s) 210, 1373
HaeIII GGCC 3 cut(s) 942, 1082, 1230
HapII CCGG 2 cut(s) 33, 725
HgaI GACGC 1 cut(s) 1280
HhaI GCGC 3 cut(s) 76, 209, 1372
Hin1II CATG 4 cut(s) 794, 919, 1012, 1090
Hin6I GCGC 3 cut(s) 74, 207, 1370
HinP1I GCGC 3 cut(s) 74, 207, 1370
HinfI GANTC 5 cut(s) 173, 402, 524, 661, 815
HpaII CCGG 2 cut(s) 33, 725
HphI GGTGA 5 cut(s) 702, 1025, 1076, 1296, 1421
Hpy166II GTNNAC 2 cut(s) 332, 1151
Hpy188I TCNGA 9 cut(s) 178, 190, 241, 478, 871, 951, 1104, 1159, 1201
Hpy188III TCNNGA 3 cut(s) 725, 837, 1318
Hpy8I GTNNAC 2 cut(s) 332, 1151
HpyAV CCTTC 1 cut(s) 731
HpyCH4III ACNGT 1 cut(s) 286
HpyCH4IV ACGT 4 cut(s) 43, 268, 953, 1147
HpyF10VI GCNNNNNNNGC 4 cut(s) 257, 626, 972, 1337
HpyF3I CTNAG 4 cut(s) 165, 307, 870, 1158
HpySE526I ACGT 4 cut(s) 43, 268, 953, 1147
Hsp92II CATG 4 cut(s) 794, 919, 1012, 1090
HspAI GCGC 3 cut(s) 74, 207, 1370
Kpn2I TCCGGA 1 cut(s) 724
Ksp22I TGATCA 1 cut(s) 292
Kzo9I GATC 4 cut(s) 199, 292, 889, 1174
LmnI GCTCC 2 cut(s) 217, 1210
Lsp1109I GCAGC 3 cut(s) 58, 817, 1265
LweI GCATC 5 cut(s) 229, 842, 902, 1192, 1402
MabI ACCWGGT 1 cut(s) 1306
MaeI CTAG 2 cut(s) 384, 1017
MaeII ACGT 4 cut(s) 43, 268, 953, 1147
MaeIII GTNAC 2 cut(s) 302, 761
MalI GATC 4 cut(s) 201, 294, 891, 1176
MboI GATC 4 cut(s) 199, 292, 889, 1174
MboII GAAGA 7 cut(s) 175, 681, 740, 796, 983, 1143, 1273
MflI RGATCY 1 cut(s) 1174
MhlI GDGCHC 2 cut(s) 253, 1153
MlyI GAGTC 3 cut(s) 518, 670, 809
MmeI TCCRAC 2 cut(s) 379, 1309
Mph1103I ATGCAT 1 cut(s) 917
MroI TCCGGA 1 cut(s) 724
MseI TTAA 5 cut(s) 486, 516, 543, 642, 1029
MslI CAYNNNNRTG 1 cut(s) 855
MspA1I CMGCKG 1 cut(s) 1256
MspCI CTTAAG 1 cut(s) 485
MspI CCGG 2 cut(s) 33, 725
MspR9I CCNGG 4 cut(s) 33, 336, 594, 1308
Mva1269I GAATGC 1 cut(s) 1333
MvaI CCWGG 3 cut(s) 336, 594, 1308
MwoI GCNNNNNNNGC 4 cut(s) 257, 626, 972, 1337
NciI CCSGG 1 cut(s) 33
NdeII GATC 4 cut(s) 199, 292, 889, 1174
NlaIII CATG 4 cut(s) 794, 919, 1012, 1090
NlaIV GGNNCC 2 cut(s) 1176, 1185
NmuCI GTSAC 1 cut(s) 761
NsbI TGCGCA 1 cut(s) 75
NsiI ATGCAT 1 cut(s) 917
NspI RCATGY 1 cut(s) 794
PceI AGGCCT 2 cut(s) 942, 1230
PciI ACATGT 1 cut(s) 790
PctI GAATGC 1 cut(s) 1333
PfeI GAWTC 2 cut(s) 173, 402
PflFI GACNNNGTC 1 cut(s) 364
PfoI TCCNGGA 1 cut(s) 592
PkrI GCNGC 4 cut(s) 73, 607, 832, 1255
PleI GAGTC 3 cut(s) 518, 669, 809
PpsI GAGTC 3 cut(s) 518, 669, 809
PpuMI RGGWCCY 1 cut(s) 1274
PscI ACATGT 1 cut(s) 790
PshAI GACNNNNGTC 1 cut(s) 791
Psp124BI GAGCTC 1 cut(s) 253
Psp5II RGGWCCY 1 cut(s) 1274
Psp6I CCWGG 3 cut(s) 334, 592, 1306
PspFI CCCAGC 3 cut(s) 203, 1187, 1218
PspGI CCWGG 3 cut(s) 334, 592, 1306
PspN4I GGNNCC 2 cut(s) 1176, 1185
PspPI GGNCC 3 cut(s) 366, 1183, 1274
PspPPI RGGWCCY 1 cut(s) 1274
PsrI GAACNNNNNNTAC 2 cut(s) 930, 962
PstI CTGCAG 1 cut(s) 1054
PstNI CAGNNNCTG 1 cut(s) 1313
PsuI RGATCY 1 cut(s) 1174
PsyI GACNNNGTC 1 cut(s) 364
PvuII CAGCTG 1 cut(s) 1256
RsaI GTAC 3 cut(s) 333, 376, 1007
RsaNI GTAC 3 cut(s) 332, 375, 1006
RseI CAYNNNNRTG 1 cut(s) 855
SacI GAGCTC 1 cut(s) 253
SaqAI TTAA 5 cut(s) 486, 516, 543, 642, 1029
SatI GCNGC 4 cut(s) 72, 606, 831, 1254
Sau3AI GATC 4 cut(s) 199, 292, 889, 1174
Sau96I GGNCC 3 cut(s) 366, 1183, 1274
ScaI AGTACT 1 cut(s) 376
SchI GAGTC 3 cut(s) 518, 670, 809
ScrFI CCNGG 4 cut(s) 33, 336, 594, 1308
SduI GDGCHC 2 cut(s) 253, 1153
SexAI ACCWGGT 1 cut(s) 1306
SfaNI GCATC 5 cut(s) 229, 842, 902, 1192, 1402
SfcI CTRYAG 2 cut(s) 1050, 1269
SinI GGWCC 3 cut(s) 366, 1183, 1274
SmiMI CAYNNNNRTG 1 cut(s) 855
SmlI CTYRAG 3 cut(s) 212, 485, 1318
SmoI CTYRAG 3 cut(s) 212, 485, 1318
SseBI AGGCCT 2 cut(s) 942, 1230
SsiI CCGC 3 cut(s) 339, 380, 605
SspMI CTAG 2 cut(s) 384, 1017
SstI GAGCTC 1 cut(s) 253
StuI AGGCCT 2 cut(s) 942, 1230
StyD4I CCNGG 4 cut(s) 31, 334, 592, 1306
StyI CCWWGG 1 cut(s) 383
TaaI ACNGT 1 cut(s) 286
TaiI ACGT 4 cut(s) 46, 271, 956, 1150
TaqI TCGA 2 cut(s) 247, 838
TatI WGTACW 2 cut(s) 374, 1005
TauI GCSGC 1 cut(s) 608
TfiI GAWTC 2 cut(s) 173, 402
Tru1I TTAA 5 cut(s) 486, 516, 543, 642, 1029
Tru9I TTAA 5 cut(s) 486, 516, 543, 642, 1029
TscAI CASTG 2 cut(s) 57, 1270
TseFI GTSAC 1 cut(s) 761
TseI GCWGC 3 cut(s) 71, 830, 1253
Tsp45I GTSAC 1 cut(s) 761
TspDTI ATGAA 7 cut(s) 423, 437, 765, 797, 839, 873, 1182
TspRI CASTG 2 cut(s) 57, 1270
Tth111I GACNNNGTC 1 cut(s) 364
Vha464I CTTAAG 1 cut(s) 485
VneI GTGCAC 1 cut(s) 1149
VpaK11BI GGWCC 3 cut(s) 366, 1183, 1274
XapI RAATTY 3 cut(s) 388, 981, 1024
XceI RCATGY 1 cut(s) 794
XcmI CCANNNNNNNNNTGG 1 cut(s) 1066
XmaJI CCTAGG 1 cut(s) 383
XspI CTAG 2 cut(s) 384, 1017
ZrmI AGTACT 1 cut(s) 376
Zsp2I ATGCAT 1 cut(s) 917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.