Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005841

Physical Location & Seq

Genomic Coordinates Forward (+)

18819933 .. 18824782

Gene Structure 4850 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G46400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3111 bp

ATGGTGACGACGGAGGTTAGGACCGCCGTCTCCGATAAGGAACCATTGCAACGGTCTCCAGAATTAGACAGCTCCACTGATTTCCTTGACAACGATAGATTAAAAGAAACATTCTCCAGTGGAGCTCTTGATTTTGATGAATGGACTTTGTTAATCTCCGAAATAGAGACGACTTCGTTCCCTGATGATATTGAGAAGCTATGTTTAGTTTATGATGCTTTCTTGTTGGAGTTTCCATTGTGTCATGGCTATTGGAGGAAATATGCTTACCATAAGATAAAGTTATGCACTTTAGAAGATGCTGTTGAAGTTTTCGAACGAGCAGTACAAGCAGCTACTTACTCTGTAGCTGTATGGCTCGACTATTGTGCTTTCGCTGTTGCTGCTTATGAAGATCCTCATGATGTTAGTAGATTATTTGAGAGGGGGCTTTCATTTATTGGAAAAGATTATTCTTGCTGCACTCTTTGGGACAAATATATAGAATATCTTTTGGGTCAGCAGCAATGGAGTTCACTGGCTAATGTATATCTCCGGACCTTGAAATATCCATCCAAAAAGTTGGATCTCTATTACAAAAACTTCAGGAAGATTGCAGCTTCTTTGAAAGAGAAGATTAAATGTAGAATAGATGTTAACGGAGACCTTTCTTCAGACCCCATGGAAGAAGATTTGGTCCATACACGTCACACTGATGAGGAGATCTCTATTGTTGTAAGAGAATTGATGGGTCCTTCCTCTAGCTCAGCTGTGTCAAAAGCACTGCATACATATTTGTCAATTGGAGAACAGTTCTATCAAGACTCACGGCAGTTGATGGAGAAAATAAGCTGCTTTGAGACACAAATCCGCAGGCCTTATTTTCATGTAAAACCATTGGATACTAATCAGCTCGACAATTGGCATGCATATTTGAGCTTCGGTGAAACATATGGGGACTTTGACTGGGCTATCAATCTCTATGAGAGATGCTTAATACCATGCGCTAATTACACCGAGTTCTGGTTCCGCTATGTGGATTTTGTAGAAAGCAAGGGTGGAAGGGAGCTAGCAAACTTTGCATTGGCTCGAGCGTCACAAACTTTTGTCAAGAGTGCTTCTGTTATCCATCTATTCAATGCAAGATTCAAAGAACATGTTGGAGATGCATCTGCTGCTTCAGTTGCTCTGTCTCGATGTGGTGAGGAACTTGGTTTTGGTTTTGTTGAAAATGTAACTAAGAAGGCTAACATGGAAAAGCGCCTGGGTAATTTTGAAGCTGCTGTTACCACGTATAGAGAAGCTCTGAATAAAACGCTCATTGGAAAAGAAAATTTGGAAACCACCGCCCGGCTGTATGTTCAATTTTCTCGCCTCAAGTACGTGATTACAAATAGTGCTGATGATGCAGCTCAGATTCTGTTAGAAGGCAATGAGAATGTTCCTCACTGCAAATTACTTCTTGAGGAACTTATGAGACTCTTGATGATGCATGGAGGGTCTCGACAAGTGGATTTGTTAGATCCTATCATAGATAAGGAATTATCTCATCAGGCAGATTCCTCCGATGGTCTAAGCGCAGAGGACAAAGAAGAAATATCAAATTTATACATGGAGTTTATTGATCTCTCTGGAACCATCCATGATGTGAGGAAGGCTTTGGGTCGACACATAAAATTATTCCCACATTCTGCTAGAGCCAAGTTACGTGGGTCCCGTCCTTCAGGAAATTTATTTAGAGAGTTGATTCAGAGAAGAGAGAAGACTCGAGAGCGCTTGAATCAGGACCTATTAACAAACAAAGGCATTAGCAGTATAGTCGATTCACCACCAAAAGAAAAGAAAGAGTCATCTCTAGACTCTTATGGTACCCAATCTAAAGATGCTGTACGGGCTGACTATGTAAACACTGAGCCTAATCAGGGCTGTCTGACTTCTGGACATCTAGTTGAAGGAAACGATAATGTTATTGAGAGGGAGACTTTGTGTGAGTCACAGAGCGATCTGTCCATGGGATTAAAAGCCAATGAAGGTGGTAAACGCTCTCATGAAGTTAGCCTACCGATCCAAGCCTCACCAGAACATGGTTTTGTCACTAAACAAGCTCACTTCTCGTCCAATTCAGTAGATACTGTGAAGTCAGATGCTATAGTGATCCAACCTAGTGGCTCACAGAGTCCCCAAAGTTACCAAAGTCAAGAGTCTCTCAGGCAAACTGGTCGGAACAGGTACCACAGAAGAGATTTAAACCAGATGCACAGAGATTCAAAACCTCGTTCTCAAGAGAGACCTCCTCAGATGCCATATTCTCCAGTCGGAACTGGTCGTGAAATTCTTGGTCAGCACATGGCTTTTACTCATCAAGACAATCGAGTAGCGCTACAAAGCTCAACCTCTCAGAATCCGCAAAACCAATTTCAGAACTCTGCACTTCAGATGCATCCTGTGGTTCAAACATCCAATGCTTATCCTCAATCTCAGATACATGGTCAGCACATGATTGTATCCCCTCCAGAGTCACAGAATCCGCAGAACCAATGTCAAAACTCTACATCTCAGGTTCAAACATCCTTTGCTTATCCTCAAACTCAGATTCCTCAGAATCCAGTGCAGAGTAACTACCAACAAGAAGGTCAGATGCAGAGTCATGAAGCTTATAACCAGATGTGGCAACAGTATTATTATAGCTATTATTACTATCAGCAACAGCAACAGCTTATGTCTGAACAGCCTCAACCAAATCAGAACCCTCAGCCACAACTAGATCAGAATCTTGTGCAACTTCTCTCCAAACAGTACCAGTCTCAAGCCAAAACTCAGTATCTACAACCACAACAGGTGGAACAGGTCAATACACAGCAACAGAGTCAAGAACCACAAAATCAGCAGCAAATTCAGTTCCAGCAACAACAACAACAACAAGAGTGGTTCCAACAGCAACAGCAATGGCAACAACAGCAGTATCTTCTCTATATTCAGCAACAGCAGTTGCAAGGAGAAGCAAAAGGCGATGAACAAAGACTCTCTATGCCGCAGGGTTCCACAACAAACAGTGATATTCAAAAGAGTCAAGAATCTGGAGCAGTCAATGAAGCAAATCTATCTTCTGACACTTCCATCAGTTCTATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000245 GO:0000375 GO:0000377 GO:0000395 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005685 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0065003 GO:0071004 GO:0071010 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1036

Amino Acids

118.66

Weight (kDa)

5.5

Isoelectric Point (pI)

51.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAT_PRP39_N	PF23240	33 - 197	2.7e-47	PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	77 - 182	4.5e-08	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_C	PF23241	275 - 414	1.3e-40	PRP39 C-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005841)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46400 AT5G46400 AT5G46400
fragaria_vesca	FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350
malus_domestica	MD10G1267400.v1.1
prunus_persica	Prupe.4G074100_v2.0.a1 Prupe.4G074100_v2.0.a1 Prupe.4G074100_v2.0.a1
pyrus_communis	pycom10g22340
rosa_chinensis	RchiOBHm_Chr5g0012961
rosa_laevigata	RLG00000031972
rosa_multiflora	Rmu_sc0006885.1_g000007 Rmu_sc0010837.1_g000003
rosa_roxburghii	Rroxscaffold_1G00063630
rosa_rugosa	Rorug05G0005500
rosa_samantha	Rh5AG099900 Rh5BG096600 Rh5CG108800 Rh5DG095300
rosa_wichuraiana	Rw5G008720 Rw5G008730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2637
Acc65I	GGTACC	2 cut(s)	1847, 2208
AccB1I	GGYRCC	2 cut(s)	1847, 2208
AccB7I	CCANNNNNTGG	1 cut(s)	2063
AccI	GTMKAC	1 cut(s)	1645
AccIII	TCCGGA	1 cut(s)	534
AciI	CCGC	7 cut(s)	24, 850, 1009, 1326, 2384, 2507, 3011
AclWI	GGATC	5 cut(s)	389, 573, 1496, 2038, 2128
AcsI	RAATTY	5 cut(s)	1312, 1582, 1708, 2310, 2871
AcuI	CTGAAG	5 cut(s)	568, 636, 1143, 1686, 2396
AfaI	GTAC	6 cut(s)	327, 1361, 1849, 1869, 2210, 2777
AfeI	AGCGCT	2 cut(s)	1754, 2358
AfiI	CCNNNNNNNGG	5 cut(s)	1002, 1015, 1329, 1901, 2063
AflIII	ACRYGT	2 cut(s)	683, 1135
AjiI	CACGTC	1 cut(s)	686
AjnI	CCWGG	1 cut(s)	1242
AjuI	GAANNNNNNNTTGG	2 cut(s)	1179, 1211
Alw21I	GWGCWC	1 cut(s)	127
AlwI	GGATC	5 cut(s)	389, 573, 1496, 2038, 2128
AlwNI	CAGNNNCTG	1 cut(s)	1399
Ama87I	CYCGRG	2 cut(s)	1068, 1746
Aor13HI	TCCGGA	1 cut(s)	534
Aor51HI	AGCGCT	2 cut(s)	1754, 2358
AoxI	GGCC	1 cut(s)	854
ApoI	RAATTY	5 cut(s)	1312, 1582, 1708, 2310, 2871
Asp718I	GGTACC	2 cut(s)	1847, 2208
AspLEI	GCGC	5 cut(s)	986, 1242, 1559, 1755, 2359
AspS9I	GGNCC	6 cut(s)	21, 537, 676, 731, 1692, 1765
AsuC2I	CCSGG	1 cut(s)	1330
AsuHPI	GGTGA	5 cut(s)	16, 935, 1193, 1797, 2046
AsuII	TTCGAA	1 cut(s)	315
AsuNHI	GCTAGC	1 cut(s)	1048
AvaI	CYCGRG	2 cut(s)	1068, 1746
AvaII	GGWCC	6 cut(s)	21, 537, 676, 731, 1692, 1765
BaeI	ACNNNNGTAYC	2 cut(s)	2924, 2957
BanI	GGYRCC	2 cut(s)	1847, 2208
BanII	GRGCYC	1 cut(s)	127
BarI	GAAGNNNNNNTAC	2 cut(s)	2022, 2054
BbsI	GAAGAC	1 cut(s)	1748
Bbv12I	GWGCWC	1 cut(s)	127
BbvCI	CCTCAGC	1 cut(s)	2730
BccI	CCATC	7 cut(s)	559, 721, 811, 1116, 1541, 1625, 3104
BceAI	ACGGC	2 cut(s)	11, 824
BcgI	CGANNNNNNTGC	6 cut(s)	350, 384, 1780, 1814, 2180, 2214
BciT130I	CCWGG	1 cut(s)	1244
BciVI	GTATCC	2 cut(s)	874, 2494
BcnI	CCSGG	1 cut(s)	1330
BfaI	CTAG	7 cut(s)	741, 1049, 1674, 1835, 1925, 2142, 2741
BfmI	CTRYAG	2 cut(s)	345, 2127
BfoI	RGCGCY	3 cut(s)	1243, 1756, 2360
BfuI	GTATCC	2 cut(s)	874, 2494
BglII	AGATCT	1 cut(s)	702
BlpI	GCTNAGC	1 cut(s)	745
Bme1390I	CCNGG	2 cut(s)	1244, 1330
Bme18I	GGWCC	6 cut(s)	21, 537, 676, 731, 1692, 1765
BmeT110I	CYCGRG	2 cut(s)	1068, 1746
BmgBI	CACGTC	1 cut(s)	686
BmgT120I	GGNCC	6 cut(s)	21, 537, 676, 731, 1692, 1765
BmrFI	CCNGG	2 cut(s)	1244, 1330
BmrI	ACTGGG	1 cut(s)	955
BmtI	GCTAGC	1 cut(s)	1052
BmuI	ACTGGG	1 cut(s)	955
BoxI	GACNNNNGTC	1 cut(s)	26
BpiI	GAAGAC	1 cut(s)	1748
BplI	GAGNNNNNCTC	4 cut(s)	689, 721, 2257, 2289
BpmI	CTGGAG	5 cut(s)	42, 100, 2274, 2475, 3078
Bpu10I	CCTNAGC	1 cut(s)	2730
Bpu1102I	GCTNAGC	1 cut(s)	745
Bpu14I	TTCGAA	1 cut(s)	315
BpuEI	CTTGAG	4 cut(s)	1340, 1463, 2244, 2769
BpuMI	CCSGG	1 cut(s)	1330
BsaAI	YACGTR	3 cut(s)	1272, 1363, 1688
BsaBI	GATNNNNATC	2 cut(s)	885, 2748
BsaI	GGTCTC	4 cut(s)	60, 636, 1485, 2260
BsaJI	CCNNGG	3 cut(s)	660, 1243, 1989
BsaWI	WCCGGW	1 cut(s)	534
BsaXI	ACNNNNNCTCC	2 cut(s)	1949, 1979
Bsc4I	CCNNNNNNNGG	5 cut(s)	1002, 1015, 1329, 1901, 2063
Bse1I	ACTGG	8 cut(s)	117, 522, 950, 2200, 2291, 2305, 2585, 2779
Bse3DI	GCAATG	4 cut(s)	44, 512, 1417, 2930
Bse8I	GATNNNNATC	2 cut(s)	885, 2748
BseAI	TCCGGA	1 cut(s)	534
BseBI	CCWGG	1 cut(s)	1244
BseDI	CCNNGG	3 cut(s)	660, 1243, 1989
BseGI	GGATG	5 cut(s)	551, 1617, 2419, 2435, 2546
BseJI	GATNNNNATC	2 cut(s)	885, 2748
BseLI	CCNNNNNNNGG	5 cut(s)	1002, 1015, 1329, 1901, 2063
BseMI	GCAATG	4 cut(s)	44, 512, 1417, 2930
BseNI	ACTGG	8 cut(s)	117, 522, 950, 2200, 2291, 2305, 2585, 2779
BseRI	GAGGAG	2 cut(s)	713, 2262
BsgI	GTGCAG	3 cut(s)	445, 2391, 2609
BshFI	GGCC	1 cut(s)	856
BshNI	GGYRCC	2 cut(s)	1847, 2208
BsiHKAI	GWGCWC	1 cut(s)	127
BsiHKCI	CYCGRG	2 cut(s)	1068, 1746
BsiSI	CCGG	2 cut(s)	535, 1330
BslFI	GGGAC	4 cut(s)	485, 950, 1678, 2142
BslI	CCNNNNNNNGG	5 cut(s)	1002, 1015, 1329, 1901, 2063
BsmBI	CGTCTC	2 cut(s)	34, 161
BsmFI	GGGAC	4 cut(s)	485, 950, 1678, 2142
BsnI	GGCC	1 cut(s)	856
Bso31I	GGTCTC	4 cut(s)	60, 636, 1485, 2260
BsoBI	CYCGRG	2 cut(s)	1068, 1746
Bsp119I	TTCGAA	1 cut(s)	315
Bsp1286I	GDGCHC	1 cut(s)	127
Bsp13I	TCCGGA	1 cut(s)	534
Bsp143I	GATC	9 cut(s)	394, 565, 702, 1501, 1603, 1981, 2043, 2133, 2743
Bsp1720I	GCTNAGC	1 cut(s)	745
Bsp19I	CCATGG	2 cut(s)	660, 1989
BspACI	CCGC	7 cut(s)	24, 850, 1009, 1326, 2384, 2507, 3011
BspANI	GGCC	1 cut(s)	856
BspEI	TCCGGA	1 cut(s)	534
BspHI	TCATGA	3 cut(s)	400, 2026, 2626
BspOI	GCTAGC	1 cut(s)	1052
BspPI	GGATC	5 cut(s)	389, 573, 1496, 2038, 2128
BspT104I	TTCGAA	1 cut(s)	315
BspT107I	GGYRCC	2 cut(s)	1847, 2208
BspTNI	GGTCTC	4 cut(s)	60, 636, 1485, 2260
BsrDI	GCAATG	4 cut(s)	44, 512, 1417, 2930
BsrI	ACTGG	8 cut(s)	117, 522, 950, 2200, 2291, 2305, 2585, 2779
BssECI	CCNNGG	3 cut(s)	660, 1243, 1989
BssMI	GATC	9 cut(s)	394, 565, 702, 1501, 1603, 1981, 2043, 2133, 2743
BssT1I	CCWWGG	2 cut(s)	660, 1989
Bst2UI	CCWGG	1 cut(s)	1244
Bst4CI	ACNGT	6 cut(s)	54, 792, 2113, 2655, 2775, 3032
Bst6I	CTCTTC	2 cut(s)	1729, 2212
BstAPI	GCANNNNNTGC	2 cut(s)	1058, 1154
BstBAI	YACGTR	3 cut(s)	1272, 1363, 1688
BstBI	TTCGAA	1 cut(s)	315
BstC8I	GCNNGC	3 cut(s)	854, 906, 1050
BstDSI	CCRYGG	2 cut(s)	660, 1989
BstF5I	GGATG	5 cut(s)	551, 1617, 2419, 2435, 2546
BstH2I	RGCGCY	3 cut(s)	1243, 1756, 2360
BstHHI	GCGC	5 cut(s)	986, 1242, 1559, 1755, 2359
BstKTI	GATC	9 cut(s)	397, 568, 705, 1504, 1606, 1984, 2046, 2136, 2746
BstMBI	GATC	9 cut(s)	394, 565, 702, 1501, 1603, 1981, 2043, 2133, 2743
BstMWI	GCNNNNNNNGC	8 cut(s)	329, 383, 1058, 1154, 1163, 1385, 1871, 2935
BstNI	CCWGG	1 cut(s)	1244
BstNSI	RCATGY	2 cut(s)	908, 1139
BstPAI	GACNNNNGTC	1 cut(s)	26
BstSCI	CCNGG	2 cut(s)	1242, 1328
BstSFI	CTRYAG	2 cut(s)	345, 2127
BstV2I	GAAGAC	1 cut(s)	1748
BstX2I	RGATCY	4 cut(s)	394, 565, 702, 1501
BstXI	CCANNNNNNTGG	2 cut(s)	562, 2144
BstYI	RGATCY	4 cut(s)	394, 565, 702, 1501
BsuI	GTATCC	2 cut(s)	874, 2494
BsuRI	GGCC	1 cut(s)	856
BtgI	CCRYGG	2 cut(s)	660, 1989
BtgZI	GCGATG	1 cut(s)	3003
BtrI	CACGTC	1 cut(s)	686
BtsCI	GGATG	5 cut(s)	551, 1617, 2419, 2435, 2546
BtsI	GCAGTG	2 cut(s)	761, 1426
BtsIMutI	CAGTG	9 cut(s)	75, 124, 515, 690, 761, 1426, 1887, 2592, 3037
Cac8I	GCNNGC	3 cut(s)	854, 906, 1050
CaiI	CAGNNNCTG	1 cut(s)	1399
CciI	TCATGA	3 cut(s)	400, 2026, 2626
CfoI	GCGC	5 cut(s)	986, 1242, 1559, 1755, 2359
Cfr13I	GGNCC	6 cut(s)	21, 537, 676, 731, 1692, 1765
CseI	GACGC	1 cut(s)	1062
Csp6I	GTAC	6 cut(s)	326, 1360, 1848, 1868, 2209, 2776
CspCI	CAANNNNNGTGG	6 cut(s)	1669, 1704, 1993, 2028, 2885, 2920
CviQI	GTAC	6 cut(s)	326, 1360, 1848, 1868, 2209, 2776
DpnI	GATC	9 cut(s)	396, 567, 704, 1503, 1605, 1983, 2045, 2135, 2745
DpnII	GATC	9 cut(s)	394, 565, 702, 1501, 1603, 1981, 2043, 2133, 2743
DraI	TTTAAA	1 cut(s)	2226
Eam1104I	CTCTTC	2 cut(s)	1729, 2212
EarI	CTCTTC	2 cut(s)	1729, 2212
Ecl136II	GAGCTC	1 cut(s)	125
Eco130I	CCWWGG	2 cut(s)	660, 1989
Eco147I	AGGCCT	1 cut(s)	856
Eco24I	GRGCYC	1 cut(s)	127
Eco31I	GGTCTC	4 cut(s)	60, 636, 1485, 2260
Eco47I	GGWCC	6 cut(s)	21, 537, 676, 731, 1692, 1765
Eco47III	AGCGCT	2 cut(s)	1754, 2358
Eco53kI	GAGCTC	1 cut(s)	125
Eco57I	CTGAAG	5 cut(s)	568, 636, 1143, 1686, 2396
Eco88I	CYCGRG	2 cut(s)	1068, 1746
EcoICRI	GAGCTC	1 cut(s)	125
EcoO109I	RGGNCCY	3 cut(s)	731, 1692, 1765
EcoRII	CCWGG	1 cut(s)	1242
EcoT14I	CCWWGG	2 cut(s)	660, 1989
EcoT22I	ATGCAT	4 cut(s)	910, 1150, 1473, 2421
EcoT38I	GRGCYC	1 cut(s)	127
ErhI	CCWWGG	2 cut(s)	660, 1989
Esp3I	CGTCTC	2 cut(s)	34, 161
FaqI	GGGAC	4 cut(s)	485, 950, 1678, 2142
FauNDI	CATATG	1 cut(s)	931
FblI	GTMKAC	1 cut(s)	1645
FokI	GGATG	5 cut(s)	538, 1604, 2406, 2422, 2533
FriOI	GRGCYC	1 cut(s)	127
FspBI	CTAG	7 cut(s)	741, 1049, 1674, 1835, 1925, 2142, 2741
GlaI	GCGC	5 cut(s)	985, 1241, 1558, 1754, 2358
GsuI	CTGGAG	5 cut(s)	42, 100, 2274, 2475, 3078
HaeII	RGCGCY	3 cut(s)	1243, 1756, 2360
HaeIII	GGCC	1 cut(s)	856
HapII	CCGG	2 cut(s)	535, 1330
HgaI	GACGC	1 cut(s)	1062
HhaI	GCGC	5 cut(s)	986, 1242, 1559, 1755, 2359
Hin6I	GCGC	5 cut(s)	984, 1240, 1557, 1753, 2357
HinP1I	GCGC	5 cut(s)	984, 1240, 1557, 1753, 2357
HincII	GTYRAC	2 cut(s)	637, 1646
HindII	GTYRAC	2 cut(s)	637, 1646
HindIII	AAGCTT	1 cut(s)	2631
HpaI	GTTAAC	1 cut(s)	637
HpaII	CCGG	2 cut(s)	535, 1330
HphI	GGTGA	5 cut(s)	16, 935, 1193, 1797, 2046
Hpy166II	GTNNAC	5 cut(s)	515, 637, 1646, 1885, 2018
Hpy8I	GTNNAC	5 cut(s)	515, 637, 1646, 1885, 2018
Hpy99I	CGWCG	1 cut(s)	13
HpyAV	CCTTC	9 cut(s)	744, 1035, 1216, 1400, 1627, 1710, 1925, 2003, 2603
HpyCH4III	ACNGT	6 cut(s)	54, 792, 2113, 2655, 2775, 3032
HpyCH4IV	ACGT	4 cut(s)	685, 1271, 1362, 1687
HpyF10VI	GCNNNNNNNGC	8 cut(s)	329, 383, 1058, 1154, 1163, 1385, 1871, 2935
HpySE526I	ACGT	4 cut(s)	685, 1271, 1362, 1687
HspAI	GCGC	5 cut(s)	984, 1240, 1557, 1753, 2357
KflI	GGGWCCC	1 cut(s)	1692
Kpn2I	TCCGGA	1 cut(s)	534
KpnI	GGTACC	2 cut(s)	1851, 2212
KspAI	GTTAAC	1 cut(s)	637
Kzo9I	GATC	9 cut(s)	394, 565, 702, 1501, 1603, 1981, 2043, 2133, 2743
LmnI	GCTCC	4 cut(s)	77, 122, 1045, 3059
MaeI	CTAG	7 cut(s)	741, 1049, 1674, 1835, 1925, 2142, 2741
MaeII	ACGT	4 cut(s)	685, 1271, 1362, 1687
MalI	GATC	9 cut(s)	396, 567, 704, 1503, 1605, 1983, 2045, 2135, 2745
MboI	GATC	9 cut(s)	394, 565, 702, 1501, 1603, 1981, 2043, 2133, 2743
MfeI	CAATTG	2 cut(s)	780, 898
MflI	RGATCY	4 cut(s)	394, 565, 702, 1501
MhlI	GDGCHC	1 cut(s)	127
MmeI	TCCRAC	7 cut(s)	207, 543, 1120, 2161, 2180, 2275, 2935
Mph1103I	ATGCAT	4 cut(s)	910, 1150, 1473, 2421
MroI	TCCGGA	1 cut(s)	534
MseI	TTAA	8 cut(s)	101, 152, 618, 636, 974, 1772, 1997, 2225
MslI	CAYNNNNRTG	1 cut(s)	693
MspA1I	CMGCKG	1 cut(s)	749
MspI	CCGG	2 cut(s)	535, 1330
MspR9I	CCNGG	2 cut(s)	1244, 1330
MunI	CAATTG	2 cut(s)	780, 898
MvaI	CCWGG	1 cut(s)	1244
MwoI	GCNNNNNNNGC	8 cut(s)	329, 383, 1058, 1154, 1163, 1385, 1871, 2935
NciI	CCSGG	1 cut(s)	1330
NcoI	CCATGG	2 cut(s)	660, 1989
NdeI	CATATG	1 cut(s)	931
NdeII	GATC	9 cut(s)	394, 565, 702, 1501, 1603, 1981, 2043, 2133, 2743
NheI	GCTAGC	1 cut(s)	1048
NmuCI	GTSAC	6 cut(s)	4, 686, 1074, 1971, 2071, 2496
NsiI	ATGCAT	4 cut(s)	910, 1150, 1473, 2421
NspI	RCATGY	2 cut(s)	908, 1139
NspV	TTCGAA	1 cut(s)	315
PaeI	GCATGC	1 cut(s)	908
PaeR7I	CTCGAG	2 cut(s)	1068, 1746
PagI	TCATGA	3 cut(s)	400, 2026, 2626
PceI	AGGCCT	1 cut(s)	856
PciI	ACATGT	1 cut(s)	1135
PcsI	WCGNNNNNNNCGW	1 cut(s)	1693
PflMI	CCANNNNNTGG	1 cut(s)	2063
Ppu21I	YACGTR	3 cut(s)	1272, 1363, 1688
PpuMI	RGGWCCY	3 cut(s)	731, 1692, 1765
PscI	ACATGT	1 cut(s)	1135
PshAI	GACNNNNGTC	1 cut(s)	26
PsiI	TTATAA	1 cut(s)	2637
Psp124BI	GAGCTC	1 cut(s)	127
Psp5II	RGGWCCY	3 cut(s)	731, 1692, 1765
Psp6I	CCWGG	1 cut(s)	1242
PspGI	CCWGG	1 cut(s)	1242
PspPI	GGNCC	6 cut(s)	21, 537, 676, 731, 1692, 1765
PspPPI	RGGWCCY	3 cut(s)	731, 1692, 1765
PspXI	VCTCGAGB	1 cut(s)	1068
PsrI	GAACNNNNNNTAC	2 cut(s)	309, 341
PstNI	CAGNNNCTG	1 cut(s)	1399
PsuI	RGATCY	4 cut(s)	394, 565, 702, 1501
PvuII	CAGCTG	1 cut(s)	749
RsaI	GTAC	6 cut(s)	327, 1361, 1849, 1869, 2210, 2777
RsaNI	GTAC	6 cut(s)	326, 1360, 1848, 1868, 2209, 2776
RseI	CAYNNNNRTG	1 cut(s)	693
SacI	GAGCTC	1 cut(s)	127
SalI	GTCGAC	1 cut(s)	1644
SaqAI	TTAA	8 cut(s)	101, 152, 618, 636, 974, 1772, 1997, 2225
Sau3AI	GATC	9 cut(s)	394, 565, 702, 1501, 1603, 1981, 2043, 2133, 2743
Sau96I	GGNCC	6 cut(s)	21, 537, 676, 731, 1692, 1765
ScrFI	CCNGG	2 cut(s)	1244, 1330
SduI	GDGCHC	1 cut(s)	127
SfcI	CTRYAG	2 cut(s)	345, 2127
Sfr274I	CTCGAG	2 cut(s)	1068, 1746
SfuI	TTCGAA	1 cut(s)	315
SinI	GGWCC	6 cut(s)	21, 537, 676, 731, 1692, 1765
SlaI	CTCGAG	2 cut(s)	1068, 1746
SmiMI	CAYNNNNRTG	1 cut(s)	693
SmlI	CTYRAG	6 cut(s)	1068, 1355, 1442, 1746, 2259, 2784
SmoI	CTYRAG	6 cut(s)	1068, 1355, 1442, 1746, 2259, 2784
SphI	GCATGC	1 cut(s)	908
SseBI	AGGCCT	1 cut(s)	856
SsiI	CCGC	7 cut(s)	24, 850, 1009, 1326, 2384, 2507, 3011
SspMI	CTAG	7 cut(s)	741, 1049, 1674, 1835, 1925, 2142, 2741
SstI	GAGCTC	1 cut(s)	127
StuI	AGGCCT	1 cut(s)	856
StyD4I	CCNGG	2 cut(s)	1242, 1328
StyI	CCWWGG	2 cut(s)	660, 1989
TaaI	ACNGT	6 cut(s)	54, 792, 2113, 2655, 2775, 3032
TaiI	ACGT	4 cut(s)	688, 1274, 1365, 1690
TatI	WGTACW	1 cut(s)	325
TauI	GCSGC	1 cut(s)	3013
Tru1I	TTAA	8 cut(s)	101, 152, 618, 636, 974, 1772, 1997, 2225
Tru9I	TTAA	8 cut(s)	101, 152, 618, 636, 974, 1772, 1997, 2225
TscAI	CASTG	9 cut(s)	82, 124, 522, 697, 768, 1433, 1894, 2592, 3037
TseFI	GTSAC	6 cut(s)	4, 686, 1074, 1971, 2071, 2496
Tsp45I	GTSAC	6 cut(s)	4, 686, 1074, 1971, 2071, 2496
TspDTI	ATGAA	9 cut(s)	153, 405, 423, 854, 2022, 2043, 2643, 3006, 3084
TspGWI	ACGGA	2 cut(s)	26, 654
TspRI	CASTG	9 cut(s)	82, 124, 522, 697, 768, 1433, 1894, 2592, 3037
Van91I	CCANNNNNTGG	1 cut(s)	2063
VpaK11BI	GGWCC	6 cut(s)	21, 537, 676, 731, 1692, 1765
XapI	RAATTY	5 cut(s)	1312, 1582, 1708, 2310, 2871
XbaI	TCTAGA	1 cut(s)	1834
XceI	RCATGY	2 cut(s)	908, 1139
XhoI	CTCGAG	2 cut(s)	1068, 1746
XmiI	GTMKAC	1 cut(s)	1645
XspI	CTAG	7 cut(s)	741, 1049, 1674, 1835, 1925, 2142, 2741
Zsp2I	ATGCAT	4 cut(s)	910, 1150, 1473, 2421

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.