Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0005841

Physical Location & Seq

Genomic Coordinates Reverse (-)

9922443 .. 9929584

Gene Structure 7142 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031972

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3630 bp

ATGAGTTTGAGCTGCAATTCTGTACCAGAGGCTGAGCCCATGGAACCAGAGACTCCAGATGAAATTCGCCGAGCTTCGCTGGACTTTGATCACTGTACTTCACTCATTTCGCAGATAGAGAATTCCTATCCTGATGATATAGAAAAAATATGTTCAGTGTATGATTCTTTCTTGGCCAAGTTTCCGTTGTGCCATGGATATTGGAGGATGTATGCTGAGCATAAGATGCGTTTGTGCTCCATTGACAAGGTTGTTGAGGTCTTTGAACGAGCTCTGCAAGCTGCAACCTACTGTGTTCCGCTGTGGGTGGACTACTGTGTTTTCAGTATGTCCTTTTTCGAAGATCCTTCCGATATTCGCAGACTATTTAAAAGAGGGATGTCCTTTGTTCGAAAGGACTATGGGTGCTATACTTTGTGGGACAAATACATTGAATTTGAGTACTCTCAGCAGGAATGGAGTTCACTGGCCCTGATTTACATCCAAGCTCTTAGATTCCCTACCAAGAAGTTGCATATTTATTATGCGAGTTTGAAGAAGTTGGCTACCTTGTTTGAAGAGGAGATGAAAAGCCAGAGTAATTCTACTGTGGATTTGCAGTCAGAAGCTTTATTTGATGGTGAAGTCCCTAGGTTTTTTGGAGATGATGAAATTTCTCTTGTAGTCAAAGACCTTCTGGATCCAGAGATTGGCTCAGGAAGGTCTAAAGCACTGCAAAGATACATATGTATTGGGCAACAGTTGTATCACGAAGCATGCCAGCTTGATGAAAAGATTGGTACTTTTGAGATTAATATAAGGAGGTCTTACTTCCATGTAAAGGAGCTTGATGCGGGTCAGTTGGAGAATTGGCATCGCTATCTGGACTATGTTGAGATGCAAGGAGATTTTGATTGGGCAGTGAAGCTTTACGAGAGGTGCTTGATTCCCTGTGCTAATTACCCCGAGTTTTGGATGCGTTATGTGGATTTCGTGGAAATCAATGGAGGAAGAGAAATTGCAAACTATTCTCTTGACCGAGCAACCCAAATATTTGTGAAGAGAGTGTCGGTGATTCATCTTTTGAATGCCAAGTTTAAGGAGCAAATAGGAGATGTACTTGGTGCCCGTGCGGCTCTTCTTCAATGTAATGCAGAGTCAGATACACACTTCGTTAAGAATGTTATCTTAAAGGCTAATATGGAAAAGCGTTTGGGAAATTTCACAGCAGCTTCCACTATATTCAGAGAAGCTCTAGCAACGGCTGCAGAGAAGAAACAGTTGCATACTCTTCCTATTCTATATGTTCATTTCTCTCGCCTTACATTCATGATGACTGATAGTGCAGATGCTGCACGAGATGTCTTGATAGATGGCATCAAACAATTGCCTCACTGCAAAGTACTTCTAGAGGAGTTGATAAAGTTTGCAATGATGAATGGAGGGAAGCAGCACATAAATGTGATAGACTCTGTTGTAACCCGTGCTATATCTCAGGAATCAGGAGTATGCAATGGTCTGAATGCAAAAGATGCTGAGGATATTTCAAGCTTATTTTTGGAGTTTGTTGACCTCTGTGGAACCATCCATGAAGTAAGAAAGGTGTGGACTCGGCATGTACGATTGTTCCCTTCTTCCATTAGGCCATCTTCCTTGGGTCAGCAGTCTGCCTTTAATGTTTATGATCAGCAAGCTACATTCACAAAGTCTTTGAATTTGCCTAGAGAAAAAGAGGAAACTTCTGCTGCTATGACTCAGCAGCCATCTAGAGATTGTACTTCTGACTCCATGATTGAGCTCCCGTTGCATGATGAAGAAATGTTATTGCCAGAAAATCATACTAAAGAGTGTGGCCAGGATCCCACATACCAGCTATCAGACCAGACATTGCCATCAAAACAATTTGAAAATCTACAGGAAAGATTGCAGCTAACATCTCCGGAAGTTTCAAGAGAGCAGTCCCCAGCTAATGCACCAGAAGCAAATATATCCTCCACCGTGGTAGAAGTGAATCTGGAATCTCAGGAAGTATCTGACGAGGCCCCAGAAAATGCCCCTGTAGCAGAAGTGAAACAGGTATCCCGGGAAGTTTCTGAAGAGGCTACAGAAAATACCCAAGTAGCAGAAGTGAAAAAGGTATCTCGGGAAGTTTCTGAGGAGCCCACAGAAAATATCCTTGTAGTAGAAGAGAAAAAAGTATCTCAGGAAGTTTCCAAGGAGGCCAGAGAAAACATCCCTAAACCAAAGATGTCGTCTGTAGAATTAGGATTTCAAGTTGCTGAAGGAAATGATTCTGTAGAATCTTCACGAGAAAACACCATGGGAAGCAATGTTGATCGAGAGTGTGACTATAAGAGTGAACAAGACCCAAAGCCACTGTCCTTGGAGAGTCTTTCTTTGAATTCCCAGGAAAATACAAATTTGGATTTAGTATCCTGTACTTCTCCCAAGTCTGAAGCTTCTCCAGAAACCTGTACTTCAAATGGAAAGAAGCTAGAGAGTGATTGCAACTCTGATCAAGACTCTTATAAGCACAGCCCACGAAATGATAGATCGTTAGAATCAGCTGGAAATGAATTAGTCAATGCTATGCCTATCCCGGTGTTTTCTCAGCCACCTGCAAATAGTTATGGAGACTGGAGTCAAATTAATCGTTCTGATAAAGTTGGTAAAGATTCCAAATTGGGCTTTCGGATGCAGTTACAAAGAAAATCACATCCACAGCAGCATGTTCCTCCACAGAAATACCCGCGAACTGAAGCAGGTCATCCAATGCCTGCCAGTCAAGGTCATCCCACTATATTAGCACCTTCACAAAACCAACAAATTCAGCAAGGCAGCCAGCAGGCCCAGCATCACAATCAGTATCAGGTAGCAAGTGGTCATGCTAATATAGCAGCACCTAATTCCGGGCCCATACCAAATGTACAAGCTGCCAATGATGCCTCTTCATCTCAGTCTCTATTGCCTGTCCAACCTGTTGCTCCACAGATGCCTCAGTCATCAGTATTAGGCAATGGGCAGTATGCGATGCAGAATCCTCAAGCATATAATCAGATGTGGCAATATTATTACTGCCAGCAGCAGCAATCCCTTCTGCAACCACAGCAGCATCATCCCCAGCAGCAGCAGCAGCAGCAGTTGTTATTGCAACAGTATCAGCAGCAGCAGCAGCAGCAGCAACTTCAACAATATTATGTTCAGATGCAACAGCAACAACTTCTTTTCCAACAACAGCAGCAATTTCAACTAACACAGCAACAACTTCCTTTGCAGCAACAACAGCAATCTCAAGTACTAAAGCAGCTTCCTTTGCAAGAGCAGCAGCAATTTCAGCAACTACAGCAACAAATTCAGCAATTTCAACAACTGCAGCAACAACTTCCTGTGCAACAACAACAACAATTTCCGTCGCAACAACAATACAATCCGCAATTGCAATTACAACAACAGCATCCGTTCTATGTGCATAAGCATCAACAGCCACTCCAACAACAATCACATCTACAGGAACAACATCAAATCAATCAGTCATCAATTCAGCAGAACTACTCGCATCATCAGGATCAAGCACAAAATTCAGATATTCATGGTGGGACAGTCATATCCTCCTTATCTCCTCACAGCCCAGTAGAACCTCCCCAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000245 GO:0000375 GO:0000377 GO:0000395 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005685 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0065003 GO:0071004 GO:0071010 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1210

Amino Acids

138.17

Weight (kDa)

5.26

Isoelectric Point (pI)

67.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Suf	PF05843	20 - 147	6.2e-09	Suppressor of forked protein (Suf)
HAT_PRP39_N	PF23240	21 - 179	3.7e-45	PRP39 N-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	58 - 165	4.3e-06	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_C	PF23241	258 - 397	3.3e-41	PRP39 C-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005841)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46400 AT5G46400 AT5G46400
fragaria_vesca	FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350
malus_domestica	MD10G1267400.v1.1
prunus_persica	Prupe.4G074100_v2.0.a1 Prupe.4G074100_v2.0.a1 Prupe.4G074100_v2.0.a1
pyrus_communis	pycom10g22340
rosa_chinensis	RchiOBHm_Chr5g0012961
rosa_laevigata	RLG00000031972
rosa_multiflora	Rmu_sc0006885.1_g000007 Rmu_sc0010837.1_g000003
rosa_roxburghii	Rroxscaffold_1G00063630
rosa_rugosa	Rorug05G0005500
rosa_samantha	Rh5AG099900 Rh5BG096600 Rh5CG108800 Rh5DG095300
rosa_wichuraiana	Rw5G008720 Rw5G008730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2508
AarI	CACCTGC	1 cut(s)	2605
Acc36I	ACCTGC	2 cut(s)	2605, 2732
AccB1I	GGYRCC	1 cut(s)	1103
AccB7I	CCANNNNNTGG	1 cut(s)	689
AccII	CGCG	1 cut(s)	2731
AccIII	TCCGGA	1 cut(s)	1918
AciI	CCGC	5 cut(s)	299, 833, 1112, 2729, 3410
AclWI	GGATC	6 cut(s)	338, 674, 687, 1832, 1845, 3552
AcoI	YGGCCR	2 cut(s)	174, 1831
AcuI	CTGAAG	4 cut(s)	2094, 2280, 2454, 2757
AfiI	CCNNNNNNNGG	4 cut(s)	689, 820, 951, 2888
AjnI	CCWGG	2 cut(s)	1833, 2385
Alw21I	GWGCWC	3 cut(s)	239, 274, 1779
Alw26I	GTCTC	3 cut(s)	44, 2607, 2943
AlwI	GGATC	6 cut(s)	338, 674, 687, 1832, 1845, 3552
AlwNI	CAGNNNCTG	2 cut(s)	32, 1331
Ama87I	CYCGRG	3 cut(s)	944, 2061, 2121
Aor13HI	TCCGGA	1 cut(s)	1918
AoxI	GGCC	8 cut(s)	174, 468, 1622, 1831, 2019, 2199, 2826, 2891
ApaI	GGGCCC	1 cut(s)	2895
ArsI	GACNNNNNNTTYG	4 cut(s)	2216, 2248, 2342, 2374
AseI	ATTAAT	2 cut(s)	792, 2628
Asp700I	GAANNNNTTC	1 cut(s)	2269
AspA2I	CCTAGG	1 cut(s)	629
AspS9I	GGNCC	5 cut(s)	469, 2020, 2827, 2891, 2892
AsuC2I	CCSGG	4 cut(s)	2062, 2063, 2579, 2890
AsuHPI	GGTGA	2 cut(s)	632, 1063
AsuII	TTCGAA	2 cut(s)	339, 391
AvaI	CYCGRG	3 cut(s)	944, 2061, 2121
AvrII	CCTAGG	1 cut(s)	629
BaeGI	GKGCMC	2 cut(s)	1108, 2895
BaeI	ACNNNNGTAYC	4 cut(s)	712, 728, 745, 761
BalI	TGGCCA	2 cut(s)	176, 1833
BamHI	GGATCC	2 cut(s)	679, 1837
BanI	GGYRCC	1 cut(s)	1103
BanII	GRGCYC	5 cut(s)	39, 274, 1779, 2142, 2895
BauI	CACGAG	2 cut(s)	1335, 2286
Bbv12I	GWGCWC	3 cut(s)	239, 274, 1779
BbvCI	CCTCAGC	1 cut(s)	1515
BccI	CCATC	6 cut(s)	611, 1346, 1571, 1633, 1750, 1879
BceAI	ACGGC	1 cut(s)	1257
BciT130I	CCWGG	2 cut(s)	1835, 2387
BciVI	GTATCC	2 cut(s)	2068, 2422
BclI	TGATCA	3 cut(s)	88, 1663, 2494
BcnI	CCSGG	4 cut(s)	2062, 2063, 2579, 2890
BcoDI	GTCTC	3 cut(s)	44, 2607, 2943
BfaI	CTAG	6 cut(s)	630, 1235, 1388, 1701, 1746, 2474
BfmI	CTRYAG	9 cut(s)	1245, 1892, 2037, 2082, 2235, 2274, 3320, 3350, 3485
BfuAI	ACCTGC	2 cut(s)	2605, 2732
BfuI	GTATCC	2 cut(s)	2068, 2422
BglI	GCCNNNNNGGC	1 cut(s)	1112
BlnI	CCTAGG	1 cut(s)	629
BlpI	GCTNAGC	2 cut(s)	33, 216
BmcAI	AGTACT	3 cut(s)	443, 1383, 3276
Bme1390I	CCNGG	6 cut(s)	1835, 2062, 2063, 2387, 2579, 2890
BmeT110I	CYCGRG	3 cut(s)	944, 2061, 2121
BmgT120I	GGNCC	5 cut(s)	469, 2020, 2827, 2891, 2892
BmiI	GGNNCC	8 cut(s)	45, 681, 1105, 1561, 1839, 2022, 2139, 2893
BmrFI	CCNGG	6 cut(s)	1835, 2062, 2063, 2387, 2579, 2890
BmrI	ACTGGG	1 cut(s)	3602
BmuI	ACTGGG	1 cut(s)	3602
BoxI	GACNNNNGTC	1 cut(s)	2619
BplI	GAGNNNNNCTC	2 cut(s)	677, 709
BpmI	CTGGAG	3 cut(s)	39, 2427, 2638
Bpu10I	CCTNAGC	2 cut(s)	694, 1515
Bpu1102I	GCTNAGC	2 cut(s)	33, 216
Bpu14I	TTCGAA	2 cut(s)	339, 391
BpuEI	CTTGAG	2 cut(s)	3006, 3255
BpuMI	CCSGG	4 cut(s)	2062, 2063, 2579, 2890
BsaBI	GATNNNNATC	1 cut(s)	479
BsaWI	WCCGGW	1 cut(s)	1918
BsaXI	ACNNNNNCTCC	2 cut(s)	3450, 3480
Bsc4I	CCNNNNNNNGG	4 cut(s)	689, 820, 951, 2888
Bse1I	ACTGG	4 cut(s)	471, 2621, 2760, 3608
Bse3DI	GCAATG	5 cut(s)	1416, 1498, 1865, 2314, 3001
Bse8I	GATNNNNATC	1 cut(s)	479
BseAI	TCCGGA	1 cut(s)	1918
BseBI	CCWGG	2 cut(s)	1835, 2387
BseJI	GATNNNNATC	1 cut(s)	479
BseLI	CCNNNNNNNGG	4 cut(s)	689, 820, 951, 2888
BseMI	GCAATG	5 cut(s)	1416, 1498, 1865, 2314, 3001
BseNI	ACTGG	4 cut(s)	471, 2621, 2760, 3608
BseRI	GAGGAG	4 cut(s)	575, 1406, 2150, 3588
BseSI	GKGCMC	2 cut(s)	1108, 2895
BseYI	CCCAGC	3 cut(s)	1942, 2829, 3099
BsgI	GTGCAG	2 cut(s)	1317, 1344
Bsh1236I	CGCG	1 cut(s)	2731
BshFI	GGCC	8 cut(s)	176, 470, 1624, 1833, 2021, 2201, 2828, 2893
BshNI	GGYRCC	1 cut(s)	1103
BsiHKAI	GWGCWC	3 cut(s)	239, 274, 1779
BsiHKCI	CYCGRG	3 cut(s)	944, 2061, 2121
BsiSI	CCGG	4 cut(s)	1919, 2062, 2579, 2889
BslFI	GGGAC	4 cut(s)	434, 611, 1924, 3589
BslI	CCNNNNNNNGG	4 cut(s)	689, 820, 951, 2888
BsmAI	GTCTC	3 cut(s)	44, 2607, 2943
BsmFI	GGGAC	4 cut(s)	434, 611, 1924, 3589
BsmI	GAATGC	2 cut(s)	1072, 1507
BsnI	GGCC	8 cut(s)	176, 470, 1624, 1833, 2021, 2201, 2828, 2893
BsoBI	CYCGRG	3 cut(s)	944, 2061, 2121
Bsp119I	TTCGAA	2 cut(s)	339, 391
Bsp120I	GGGCCC	1 cut(s)	2891
Bsp1286I	GDGCHC	7 cut(s)	39, 239, 274, 1108, 1779, 2142, 2895
Bsp13I	TCCGGA	1 cut(s)	1918
Bsp1407I	TGTACA	1 cut(s)	2905
Bsp143I	GATC	9 cut(s)	88, 343, 679, 1663, 1837, 2314, 2494, 2531, 3544
Bsp1720I	GCTNAGC	2 cut(s)	33, 216
Bsp19I	CCATGG	3 cut(s)	39, 193, 2298
BspACI	CCGC	5 cut(s)	299, 833, 1112, 2729, 3410
BspANI	GGCC	8 cut(s)	176, 470, 1624, 1833, 2021, 2201, 2828, 2893
BspEI	TCCGGA	1 cut(s)	1918
BspFNI	CGCG	1 cut(s)	2731
BspHI	TCATGA	1 cut(s)	1308
BspLI	GGNNCC	8 cut(s)	45, 681, 1105, 1561, 1839, 2022, 2139, 2893
BspMAI	CTGCAG	2 cut(s)	1249, 3354
BspMI	ACCTGC	2 cut(s)	2605, 2732
BspPI	GGATC	6 cut(s)	338, 674, 687, 1832, 1845, 3552
BspQI	GCTCTTC	1 cut(s)	1122
BspT104I	TTCGAA	2 cut(s)	339, 391
BspT107I	GGYRCC	1 cut(s)	1103
BsrDI	GCAATG	5 cut(s)	1416, 1498, 1865, 2314, 3001
BsrGI	TGTACA	1 cut(s)	2905
BsrI	ACTGG	4 cut(s)	471, 2621, 2760, 3608
BssMI	GATC	9 cut(s)	88, 343, 679, 1663, 1837, 2314, 2494, 2531, 3544
BssSI	CACGAG	2 cut(s)	1335, 2286
BssT1I	CCWWGG	7 cut(s)	39, 193, 629, 1632, 2193, 2298, 2361
Bst2BI	CACGAG	2 cut(s)	1335, 2286
Bst2UI	CCWGG	2 cut(s)	1835, 2387
Bst6I	CTCTTC	8 cut(s)	552, 985, 1034, 1122, 1275, 2070, 2160, 2932
BstAPI	GCANNNNNTGC	4 cut(s)	226, 1244, 1331, 1511
BstAUI	TGTACA	1 cut(s)	2905
BstBI	TTCGAA	2 cut(s)	339, 391
BstC8I	GCNNGC	8 cut(s)	279, 757, 761, 1671, 2757, 2822, 2826, 3059
BstDSI	CCRYGG	4 cut(s)	39, 193, 1977, 2298
BstFNI	CGCG	1 cut(s)	2731
BstKTI	GATC	9 cut(s)	91, 346, 682, 1666, 1840, 2317, 2497, 2534, 3547
BstMAI	GTCTC	3 cut(s)	44, 2607, 2943
BstMBI	GATC	9 cut(s)	88, 343, 679, 1663, 1837, 2314, 2494, 2531, 3544
BstNI	CCWGG	2 cut(s)	1835, 2387
BstNSI	RCATGY	3 cut(s)	759, 1598, 2711
BstPAI	GACNNNNGTC	1 cut(s)	2619
BstSCI	CCNGG	6 cut(s)	1833, 2060, 2061, 2385, 2577, 2888
BstSFI	CTRYAG	9 cut(s)	1245, 1892, 2037, 2082, 2235, 2274, 3320, 3350, 3485
BstSLI	GKGCMC	2 cut(s)	1108, 2895
BstUI	CGCG	1 cut(s)	2731
BstX2I	RGATCY	3 cut(s)	343, 679, 1837
BstYI	RGATCY	3 cut(s)	343, 679, 1837
BsuI	GTATCC	2 cut(s)	2068, 2422
BsuRI	GGCC	8 cut(s)	176, 470, 1624, 1833, 2021, 2201, 2828, 2893
BtgI	CCRYGG	4 cut(s)	39, 193, 1977, 2298
BtgZI	GCGATG	2 cut(s)	839, 3023
BtsI	GCAGTG	3 cut(s)	710, 906, 1372
BtsIMutI	CAGTG	7 cut(s)	91, 162, 464, 710, 906, 1372, 2354
BveI	ACCTGC	2 cut(s)	2605, 2732
Cac8I	GCNNGC	8 cut(s)	279, 757, 761, 1671, 2757, 2822, 2826, 3059
CaiI	CAGNNNCTG	2 cut(s)	32, 1331
CciI	TCATGA	1 cut(s)	1308
Cfr13I	GGNCC	5 cut(s)	469, 2020, 2827, 2891, 2892
Cfr9I	CCCGGG	1 cut(s)	2061
CspCI	CAANNNNNGTGG	2 cut(s)	2343, 2378
DpnI	GATC	9 cut(s)	90, 345, 681, 1665, 1839, 2316, 2496, 2533, 3546
DpnII	GATC	9 cut(s)	88, 343, 679, 1663, 1837, 2314, 2494, 2531, 3544
DraI	TTTAAA	1 cut(s)	370
EaeI	YGGCCR	2 cut(s)	174, 1831
Eam1104I	CTCTTC	8 cut(s)	552, 985, 1034, 1122, 1275, 2070, 2160, 2932
EarI	CTCTTC	8 cut(s)	552, 985, 1034, 1122, 1275, 2070, 2160, 2932
Ecl136II	GAGCTC	2 cut(s)	272, 1777
Eco130I	CCWWGG	7 cut(s)	39, 193, 629, 1632, 2193, 2298, 2361
Eco24I	GRGCYC	5 cut(s)	39, 274, 1779, 2142, 2895
Eco53kI	GAGCTC	2 cut(s)	272, 1777
Eco57I	CTGAAG	4 cut(s)	2094, 2280, 2454, 2757
Eco88I	CYCGRG	3 cut(s)	944, 2061, 2121
EcoICRI	GAGCTC	2 cut(s)	272, 1777
EcoO109I	RGGNCCY	1 cut(s)	2020
EcoRI	GAATTC	2 cut(s)	121, 2380
EcoRII	CCWGG	2 cut(s)	1833, 2385
EcoT14I	CCWWGG	7 cut(s)	39, 193, 629, 1632, 2193, 2298, 2361
EcoT38I	GRGCYC	5 cut(s)	39, 274, 1779, 2142, 2895
ErhI	CCWWGG	7 cut(s)	39, 193, 629, 1632, 2193, 2298, 2361
FalI	AAGNNNNNCTT	2 cut(s)	790, 822
FaqI	GGGAC	4 cut(s)	434, 611, 1924, 3589
FauI	CCCGC	2 cut(s)	826, 2736
FauNDI	CATATG	1 cut(s)	725
FbaI	TGATCA	3 cut(s)	88, 1663, 2494
FriOI	GRGCYC	5 cut(s)	39, 274, 1779, 2142, 2895
FspBI	CTAG	6 cut(s)	630, 1235, 1388, 1701, 1746, 2474
GsaI	CCCAGC	3 cut(s)	1946, 2833, 3103
GsuI	CTGGAG	3 cut(s)	39, 2427, 2638
HaeIII	GGCC	8 cut(s)	176, 470, 1624, 1833, 2021, 2201, 2828, 2893
HapII	CCGG	4 cut(s)	1919, 2062, 2579, 2889
HincII	GTYRAC	1 cut(s)	1549
HindII	GTYRAC	1 cut(s)	1549
HindIII	AAGCTT	4 cut(s)	606, 905, 1528, 2436
HpaII	CCGG	4 cut(s)	1919, 2062, 2579, 2889
HphI	GGTGA	2 cut(s)	632, 1063
Hpy166II	GTNNAC	5 cut(s)	310, 464, 1549, 1587, 2339
Hpy8I	GTNNAC	5 cut(s)	310, 464, 1549, 1587, 2339
Hpy99I	CGWCG	1 cut(s)	3394
HpyAV	CCTTC	7 cut(s)	357, 683, 693, 1620, 2255, 2799, 3083
Kpn2I	TCCGGA	1 cut(s)	1918
Ksp22I	TGATCA	3 cut(s)	88, 1663, 2494
Kzo9I	GATC	9 cut(s)	88, 343, 679, 1663, 1837, 2314, 2494, 2531, 3544
LguI	GCTCTTC	1 cut(s)	1122
LmnI	GCTCC	6 cut(s)	242, 823, 1081, 1782, 2137, 2968
MaeI	CTAG	6 cut(s)	630, 1235, 1388, 1701, 1746, 2474
MaeIII	GTNAC	3 cut(s)	1456, 2324, 2679
MalI	GATC	9 cut(s)	90, 345, 681, 1665, 1839, 2316, 2496, 2533, 3546
MboI	GATC	9 cut(s)	88, 343, 679, 1663, 1837, 2314, 2494, 2531, 3544
MfeI	CAATTG	2 cut(s)	1364, 3413
MflI	RGATCY	3 cut(s)	343, 679, 1837
MhlI	GDGCHC	7 cut(s)	39, 239, 274, 1108, 1779, 2142, 2895
MlsI	TGGCCA	2 cut(s)	176, 1833
MluNI	TGGCCA	2 cut(s)	176, 1833
MlyI	GAGTC	9 cut(s)	46, 1145, 1442, 1582, 1726, 1757, 2377, 2495, 2629
MmeI	TCCRAC	4 cut(s)	822, 2977, 3232, 3493
Mox20I	TGGCCA	2 cut(s)	176, 1833
MroI	TCCGGA	1 cut(s)	1918
MroXI	GAANNNNTTC	1 cut(s)	2269
MscI	TGGCCA	2 cut(s)	176, 1833
MseI	TTAA	7 cut(s)	369, 792, 1077, 1155, 1169, 1653, 2628
MslI	CAYNNNNRTG	2 cut(s)	1437, 1439
Msp20I	TGGCCA	2 cut(s)	176, 1833
MspA1I	CMGCKG	2 cut(s)	301, 2546
MspI	CCGG	4 cut(s)	1919, 2062, 2579, 2889
MspR9I	CCNGG	6 cut(s)	1835, 2062, 2063, 2387, 2579, 2890
MunI	CAATTG	2 cut(s)	1364, 3413
Mva1269I	GAATGC	2 cut(s)	1072, 1507
MvaI	CCWGG	2 cut(s)	1835, 2387
MvnI	CGCG	1 cut(s)	2731
NciI	CCSGG	4 cut(s)	2062, 2063, 2579, 2890
NcoI	CCATGG	3 cut(s)	39, 193, 2298
NdeI	CATATG	1 cut(s)	725
NdeII	GATC	9 cut(s)	88, 343, 679, 1663, 1837, 2314, 2494, 2531, 3544
NlaIV	GGNNCC	8 cut(s)	45, 681, 1105, 1561, 1839, 2022, 2139, 2893
NmeAIII	GCCGAG	2 cut(s)	95, 1570
NmuCI	GTSAC	1 cut(s)	2324
NspI	RCATGY	3 cut(s)	759, 1598, 2711
NspV	TTCGAA	2 cut(s)	339, 391
PaeI	GCATGC	1 cut(s)	759
PagI	TCATGA	1 cut(s)	1308
PaqCI	CACCTGC	1 cut(s)	2605
PciSI	GCTCTTC	1 cut(s)	1122
PcsI	WCGNNNNNNNCGW	1 cut(s)	1597
PctI	GAATGC	2 cut(s)	1072, 1507
PdmI	GAANNNNTTC	1 cut(s)	2269
PflMI	CCANNNNNTGG	1 cut(s)	689
PleI	GAGTC	9 cut(s)	46, 1144, 1442, 1582, 1726, 1757, 2376, 2495, 2628
PpsI	GAGTC	9 cut(s)	46, 1144, 1442, 1582, 1726, 1757, 2376, 2495, 2628
PshAI	GACNNNNGTC	1 cut(s)	2619
PshBI	ATTAAT	2 cut(s)	792, 2628
PsiI	TTATAA	1 cut(s)	2508
Psp124BI	GAGCTC	2 cut(s)	274, 1779
Psp6I	CCWGG	2 cut(s)	1833, 2385
PspFI	CCCAGC	3 cut(s)	1942, 2829, 3099
PspGI	CCWGG	2 cut(s)	1833, 2385
PspN4I	GGNNCC	8 cut(s)	45, 681, 1105, 1561, 1839, 2022, 2139, 2893
PspOMI	GGGCCC	1 cut(s)	2891
PspPI	GGNCC	5 cut(s)	469, 2020, 2827, 2891, 2892
PstI	CTGCAG	2 cut(s)	1249, 3354
PstNI	CAGNNNCTG	2 cut(s)	32, 1331
PsuI	RGATCY	3 cut(s)	343, 679, 1837
PvuII	CAGCTG	1 cut(s)	2546
RseI	CAYNNNNRTG	2 cut(s)	1437, 1439
SacI	GAGCTC	2 cut(s)	274, 1779
SapI	GCTCTTC	1 cut(s)	1122
SaqAI	TTAA	7 cut(s)	369, 792, 1077, 1155, 1169, 1653, 2628
Sau3AI	GATC	9 cut(s)	88, 343, 679, 1663, 1837, 2314, 2494, 2531, 3544
Sau96I	GGNCC	5 cut(s)	469, 2020, 2827, 2891, 2892
ScaI	AGTACT	3 cut(s)	443, 1383, 3276
SchI	GAGTC	9 cut(s)	46, 1145, 1442, 1582, 1726, 1757, 2377, 2495, 2629
ScrFI	CCNGG	6 cut(s)	1835, 2062, 2063, 2387, 2579, 2890
SduI	GDGCHC	7 cut(s)	39, 239, 274, 1108, 1779, 2142, 2895
SfcI	CTRYAG	9 cut(s)	1245, 1892, 2037, 2082, 2235, 2274, 3320, 3350, 3485
SfuI	TTCGAA	2 cut(s)	339, 391
SmaI	CCCGGG	1 cut(s)	2063
SmiMI	CAYNNNNRTG	2 cut(s)	1437, 1439
SmlI	CTYRAG	2 cut(s)	3021, 3270
SmoI	CTYRAG	2 cut(s)	3021, 3270
SphI	GCATGC	1 cut(s)	759
SsiI	CCGC	5 cut(s)	299, 833, 1112, 2729, 3410
SspI	AATATT	3 cut(s)	1032, 3047, 3173
SspMI	CTAG	6 cut(s)	630, 1235, 1388, 1701, 1746, 2474
SstI	GAGCTC	2 cut(s)	274, 1779
StyD4I	CCNGG	6 cut(s)	1833, 2060, 2061, 2385, 2577, 2888
StyI	CCWWGG	7 cut(s)	39, 193, 629, 1632, 2193, 2298, 2361
TaqI	TCGA	3 cut(s)	339, 391, 2317
TaqII	GACCGA	1 cut(s)	1032
TatI	WGTACW	9 cut(s)	95, 441, 1096, 1381, 1754, 2417, 2453, 2905, 3274
TauI	GCSGC	1 cut(s)	1115
Tru1I	TTAA	7 cut(s)	369, 792, 1077, 1155, 1169, 1653, 2628
Tru9I	TTAA	7 cut(s)	369, 792, 1077, 1155, 1169, 1653, 2628
TscAI	CASTG	7 cut(s)	98, 162, 471, 717, 906, 1379, 2361
TseFI	GTSAC	1 cut(s)	2324
Tsp45I	GTSAC	1 cut(s)	2324
TspGWI	ACGGA	3 cut(s)	174, 3378, 3426
TspMI	CCCGGG	1 cut(s)	2061
TspRI	CASTG	7 cut(s)	98, 162, 471, 717, 906, 1379, 2361
Van91I	CCANNNNNTGG	1 cut(s)	689
VspI	ATTAAT	2 cut(s)	792, 2628
XbaI	TCTAGA	2 cut(s)	1387, 1745
XceI	RCATGY	3 cut(s)	759, 1598, 2711
XmaI	CCCGGG	1 cut(s)	2061
XmaJI	CCTAGG	1 cut(s)	629
XmnI	GAANNNNTTC	1 cut(s)	2269
XspI	CTAG	6 cut(s)	630, 1235, 1388, 1701, 1746, 2474
ZrmI	AGTACT	3 cut(s)	443, 1383, 3276

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.