Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010837.1

Orthogroup ID

OG0005841

Physical Location & Seq

Genomic Coordinates Forward (+)

6149 .. 11150

Gene Structure 5002 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010837.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2406 bp

atgtcctttgttcgaaaggactatgggtgctatactttgtgggacaaatacattgaatttgagtactctcagcaggaatggagttcactggccctgatttacatccaagctcttagattccctaccaagaagttgcatatttattatgcgagtttgaagaagttggctaccttgtttgaagaggagatgaaaagccagagtaattctactgtggatttgcagtcagaagctttatttgatggtgaagtccctaggttttttggagatgatgaaatttctcttgtagtcaaagaccttctggatccagcaattggctcaggaaggtctaaagcactgcaaagatacatatgtattgggaaacagttgtatcacgaagcatgccagcttgatgaaaagattggtacttttgagattaatataaggaggtcttacttccatgtaaaggagcttgatgcgggtcagttggagaattggcatcgctatctggactatgttgagatgcaaggggattttgattgggcggtgaagctttatgagaggtgcttgattccctgtgctaattaccctgagttttggatgcgttatgtggatttcgtggaaatcaatggaggaagagaaattgcaaactattctcttgaccgagcaacccaaatatttgtgaagagagtgtcggtgattcatcttttgaatgccaagttcaaggagcaaataggagatgtacttggtgcccgtgcggctcttcttcaatgtaatgcagagtcagatacacacttcgttaagaatgttatcttaaaggctaatatggaaaaacgtttgggaaatttgacagcagcttccactatattcagagaagctctagcaatggctgcagagaagaaacagtcgcatactcttcctattctatatgttcatttctctcgccttacattcatgatgactgatagtgcagatgctgcacgagatgtcttgatagatggcatcaaacaattgcctcactgcaaagtacttctagaggagttgataaagtttgcaatgatgaatggagggaagcagcacataaatgtgatagactctgttgtaacccgtgctatatctcaggaatcaggagtatgcaatggtctgaatgcaaaagatgctgaggatatttcaagcttatttttagagtttgttgacctctgtggaaccatccatgaagtaagaaaggtgttgactcggcatgtacgattgttcccttcttccattaggccatcttccttgggtcagcagtctatctttaatgtttatgatcagcaagctacattcacaaagtctttgaatttgcctagagaaaaagaggaaacttctgctgctatgactcagcagccatctagagattgtacttctgactccatgattgagctcccgttgcatgatgaagtaatgttattgccagaaaatcatactaaagagtgtggccaggatcccgcataccagctatcagaccagacattgccatcaaaacaatttgaaaatctacaggaaagattgcagctgacatctccggaagtttcaaaagagcagtccccagctaatgcaccagaagcaaatatatcctccaccgtggtagaagtgaatctggtatctcaggaagtatctgacaaggccccagaaaatgcccctgtagcagaagtgaaacaggtatcccgggaagtttctgaagaggctacagaaaatacccatgtagcagaagtgaaaaaggtatctcgagaagtttctgaggagcccacagaaaatatccttgtagtagaagagaaaaaagtatctcaggaagtttctgaggaggccagagaaaacatccctaaaccagagatgtcgtctgtagaattaggatttcaagttgctgaaggaaatgattctatagaatcttcacaagaaaacaccatgggaagcaatgttgatcgagagtgtgactataagagcgaacaaaacccaaagccactgtccttggagagtctttctttgaattcccaggaaaatacaaatttggatttagtatcatccacttctcccaagtctgaagcttctccagaaacctgtacttcaaatggaaagaagctagagagtgattgcaactctgatcaagactcttatatgcacagcccacgaaatgatagatcgttagaatcagctggaaatgaattagtcaatgctatgcctatcccagtgttttctcagccacctgcaaatagttgtggagactggagtcaaattaatcgttctgataaagttggtaaagattccaaattgggctttcggatgcagttacaaaaatcacatccacagcagcatgttcctccaaagaaatacccgcgaactgaagcaggtcatccaatgcctgcaagtcaaggtagcaagtggtcatgctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000245 GO:0000375 GO:0000377 GO:0000395 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005685 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0065003 GO:0071004 GO:0071010 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

801

Amino Acids

90.24

Weight (kDa)

5.13

Isoelectric Point (pI)

58.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005841)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46400 AT5G46400 AT5G46400
fragaria_vesca	FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350
malus_domestica	MD10G1267400.v1.1
prunus_persica	Prupe.4G074100_v2.0.a1 Prupe.4G074100_v2.0.a1 Prupe.4G074100_v2.0.a1
pyrus_communis	pycom10g22340
rosa_chinensis	RchiOBHm_Chr5g0012961
rosa_laevigata	RLG00000031972
rosa_multiflora	Rmu_sc0006885.1_g000007 Rmu_sc0010837.1_g000003
rosa_roxburghii	Rroxscaffold_1G00063630
rosa_rugosa	Rorug05G0005500
rosa_samantha	Rh5AG099900 Rh5BG096600 Rh5CG108800 Rh5DG095300
rosa_wichuraiana	Rw5G008720 Rw5G008730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2227
Acc36I	ACCTGC	2 cut(s)	2227, 2351
AccB1I	GGYRCC	1 cut(s)	725
AccB7I	CCANNNNNTGG	1 cut(s)	311
AccII	CGCG	1 cut(s)	2350
AccIII	TCCGGA	1 cut(s)	1540
AciI	CCGC	5 cut(s)	455, 521, 734, 1464, 2348
AclI	AACGTT	1 cut(s)	811
AclWI	GGATC	4 cut(s)	296, 309, 1454, 1467
AcoI	YGGCCR	1 cut(s)	1453
AcsI	RAATTY	6 cut(s)	56, 273, 820, 1315, 2002, 2020
AcuI	CTGAAG	4 cut(s)	1716, 1902, 2076, 2376
AfaI	GTAC	7 cut(s)	65, 403, 720, 1005, 1221, 1378, 2077
AfiI	CCNNNNNNNGG	2 cut(s)	311, 442
AjnI	CCWGG	2 cut(s)	1455, 2007
Alw21I	GWGCWC	1 cut(s)	1401
Alw26I	GTCTC	1 cut(s)	2229
AlwI	GGATC	4 cut(s)	296, 309, 1454, 1467
AlwNI	CAGNNNCTG	1 cut(s)	953
Ama87I	CYCGRG	2 cut(s)	1683, 1743
Aor13HI	TCCGGA	1 cut(s)	1540
AoxI	GGCC	5 cut(s)	90, 1244, 1453, 1641, 1821
ApeKI	GCWGC	8 cut(s)	830, 866, 953, 1051, 1346, 1360, 1528, 2323
ApoI	RAATTY	6 cut(s)	56, 273, 820, 1315, 2002, 2020
ArsI	GACNNNNNNTTYG	4 cut(s)	1544, 1576, 1964, 1996
AseI	ATTAAT	2 cut(s)	414, 2250
Asp700I	GAANNNNTTC	1 cut(s)	1891
AspA2I	CCTAGG	1 cut(s)	251
AspS9I	GGNCC	2 cut(s)	91, 1642
AsuC2I	CCSGG	2 cut(s)	1684, 1685
AsuHPI	GGTGA	3 cut(s)	254, 535, 685
AsuII	TTCGAA	1 cut(s)	13
AvaI	CYCGRG	2 cut(s)	1683, 1743
AvrII	CCTAGG	1 cut(s)	251
BaeGI	GKGCMC	1 cut(s)	730
BaeI	ACNNNNGTAYC	4 cut(s)	334, 350, 367, 383
BalI	TGGCCA	1 cut(s)	1455
BamHI	GGATCC	2 cut(s)	301, 1459
BanI	GGYRCC	1 cut(s)	725
BanII	GRGCYC	2 cut(s)	1401, 1764
BauI	CACGAG	1 cut(s)	957
Bbv12I	GWGCWC	1 cut(s)	1401
BbvCI	CCTCAGC	1 cut(s)	1137
BbvI	GCAGC	8 cut(s)	842, 853, 940, 1063, 1333, 1372, 1540, 2335
BccI	CCATC	6 cut(s)	233, 968, 1193, 1255, 1372, 1501
BciT130I	CCWGG	2 cut(s)	1457, 2009
BciVI	GTATCC	1 cut(s)	1690
BclI	TGATCA	2 cut(s)	1285, 2116
BcnI	CCSGG	2 cut(s)	1684, 1685
BcoDI	GTCTC	1 cut(s)	2229
BfaI	CTAG	6 cut(s)	252, 857, 1010, 1323, 1368, 2096
BfmI	CTRYAG	6 cut(s)	867, 1514, 1659, 1704, 1857, 1896
BfuAI	ACCTGC	2 cut(s)	2227, 2351
BfuI	GTATCC	1 cut(s)	1690
BglI	GCCNNNNNGGC	1 cut(s)	734
BisI	GCNGC	9 cut(s)	735, 831, 867, 954, 1052, 1347, 1361, 1529, 2324
BlnI	CCTAGG	1 cut(s)	251
BlsI	GCNGC	9 cut(s)	736, 832, 868, 955, 1053, 1348, 1362, 1530, 2325
BmcAI	AGTACT	2 cut(s)	65, 1005
Bme1390I	CCNGG	4 cut(s)	1457, 1684, 1685, 2009
BmeT110I	CYCGRG	2 cut(s)	1683, 1743
BmgT120I	GGNCC	2 cut(s)	91, 1642
BmiI	GGNNCC	6 cut(s)	303, 727, 1183, 1461, 1644, 1761
BmrFI	CCNGG	4 cut(s)	1457, 1684, 1685, 2009
BmrI	ACTGGG	1 cut(s)	2195
BmsI	GCATC	8 cut(s)	442, 484, 489, 567, 940, 987, 1123, 2286
BmuI	ACTGGG	1 cut(s)	2195
BoxI	GACNNNNGTC	1 cut(s)	2241
BpmI	CTGGAG	2 cut(s)	2049, 2260
Bpu10I	CCTNAGC	2 cut(s)	316, 1137
Bpu14I	TTCGAA	1 cut(s)	13
BpuMI	CCSGG	2 cut(s)	1684, 1685
BsaBI	GATNNNNATC	1 cut(s)	101
BsaJI	CCNNGG	7 cut(s)	251, 1254, 1599, 1683, 1920, 1983, 2007
BsaWI	WCCGGW	1 cut(s)	1540
Bsc4I	CCNNNNNNNGG	2 cut(s)	311, 442
Bse1I	ACTGG	3 cut(s)	93, 2201, 2243
Bse3DI	GCAATG	5 cut(s)	867, 1038, 1120, 1487, 1936
Bse8I	GATNNNNATC	1 cut(s)	101
BseAI	TCCGGA	1 cut(s)	1540
BseBI	CCWGG	2 cut(s)	1457, 2009
BseDI	CCNNGG	7 cut(s)	251, 1254, 1599, 1683, 1920, 1983, 2007
BseGI	GGATG	8 cut(s)	102, 582, 1185, 1833, 2036, 2301, 2314, 2365
BseJI	GATNNNNATC	1 cut(s)	101
BseLI	CCNNNNNNNGG	2 cut(s)	311, 442
BseMI	GCAATG	5 cut(s)	867, 1038, 1120, 1487, 1936
BseNI	ACTGG	3 cut(s)	93, 2201, 2243
BseRI	GAGGAG	4 cut(s)	197, 1028, 1772, 1832
BseSI	GKGCMC	1 cut(s)	730
BseXI	GCAGC	8 cut(s)	842, 853, 940, 1063, 1333, 1372, 1540, 2335
BseYI	CCCAGC	1 cut(s)	1564
BsgI	GTGCAG	2 cut(s)	939, 966
Bsh1236I	CGCG	1 cut(s)	2350
BshFI	GGCC	5 cut(s)	92, 1246, 1455, 1643, 1823
BshNI	GGYRCC	1 cut(s)	725
BsiHKAI	GWGCWC	1 cut(s)	1401
BsiHKCI	CYCGRG	2 cut(s)	1683, 1743
BsiSI	CCGG	2 cut(s)	1541, 1684
BslFI	GGGAC	3 cut(s)	56, 233, 1546
BslI	CCNNNNNNNGG	2 cut(s)	311, 442
BsmAI	GTCTC	1 cut(s)	2229
BsmFI	GGGAC	3 cut(s)	56, 233, 1546
BsmI	GAATGC	2 cut(s)	694, 1129
BsnI	GGCC	5 cut(s)	92, 1246, 1455, 1643, 1823
BsoBI	CYCGRG	2 cut(s)	1683, 1743
Bsp119I	TTCGAA	1 cut(s)	13
Bsp1286I	GDGCHC	3 cut(s)	730, 1401, 1764
Bsp13I	TCCGGA	1 cut(s)	1540
Bsp143I	GATC	6 cut(s)	301, 1285, 1459, 1936, 2116, 2153
Bsp19I	CCATGG	1 cut(s)	1920
BspACI	CCGC	5 cut(s)	455, 521, 734, 1464, 2348
BspANI	GGCC	5 cut(s)	92, 1246, 1455, 1643, 1823
BspEI	TCCGGA	1 cut(s)	1540
BspFNI	CGCG	1 cut(s)	2350
BspHI	TCATGA	1 cut(s)	930
BspLI	GGNNCC	6 cut(s)	303, 727, 1183, 1461, 1644, 1761
BspMAI	CTGCAG	1 cut(s)	871
BspMI	ACCTGC	2 cut(s)	2227, 2351
BspPI	GGATC	4 cut(s)	296, 309, 1454, 1467
BspQI	GCTCTTC	1 cut(s)	744
BspT104I	TTCGAA	1 cut(s)	13
BspT107I	GGYRCC	1 cut(s)	725
BsrDI	GCAATG	5 cut(s)	867, 1038, 1120, 1487, 1936
BsrI	ACTGG	3 cut(s)	93, 2201, 2243
BssECI	CCNNGG	7 cut(s)	251, 1254, 1599, 1683, 1920, 1983, 2007
BssMI	GATC	6 cut(s)	301, 1285, 1459, 1936, 2116, 2153
BssSI	CACGAG	1 cut(s)	957
BssT1I	CCWWGG	4 cut(s)	251, 1254, 1920, 1983
Bst2BI	CACGAG	1 cut(s)	957
Bst2UI	CCWGG	2 cut(s)	1457, 2009
Bst4CI	ACNGT	5 cut(s)	211, 363, 882, 1600, 1980
Bst6I	CTCTTC	7 cut(s)	174, 607, 656, 744, 897, 1692, 1782
BstAPI	GCANNNNNTGC	3 cut(s)	866, 953, 1133
BstBI	TTCGAA	1 cut(s)	13
BstC8I	GCNNGC	4 cut(s)	379, 383, 1293, 2376
BstDSI	CCRYGG	2 cut(s)	1599, 1920
BstF5I	GGATG	8 cut(s)	102, 582, 1185, 1833, 2036, 2301, 2314, 2365
BstFNI	CGCG	1 cut(s)	2350
BstKTI	GATC	6 cut(s)	304, 1288, 1462, 1939, 2119, 2156
BstMAI	GTCTC	1 cut(s)	2229
BstMBI	GATC	6 cut(s)	301, 1285, 1459, 1936, 2116, 2153
BstMWI	GCNNNNNNNGC	7 cut(s)	734, 866, 953, 1133, 1405, 1580, 1661
BstNI	CCWGG	2 cut(s)	1457, 2009
BstNSI	RCATGY	3 cut(s)	381, 1220, 2330
BstPAI	GACNNNNGTC	1 cut(s)	2241
BstSCI	CCNGG	4 cut(s)	1455, 1682, 1683, 2007
BstSFI	CTRYAG	6 cut(s)	867, 1514, 1659, 1704, 1857, 1896
BstSLI	GKGCMC	1 cut(s)	730
BstUI	CGCG	1 cut(s)	2350
BstV1I	GCAGC	8 cut(s)	842, 853, 940, 1063, 1333, 1372, 1540, 2335
BstX2I	RGATCY	2 cut(s)	301, 1459
BstYI	RGATCY	2 cut(s)	301, 1459
BsuI	GTATCC	1 cut(s)	1690
BsuRI	GGCC	5 cut(s)	92, 1246, 1455, 1643, 1823
BtgI	CCRYGG	2 cut(s)	1599, 1920
BtgZI	GCGATG	1 cut(s)	461
BtsCI	GGATG	8 cut(s)	102, 582, 1185, 1833, 2036, 2301, 2314, 2365
BtsI	GCAGTG	2 cut(s)	332, 994
BtsIMutI	CAGTG	5 cut(s)	86, 332, 994, 1976, 2208
BveI	ACCTGC	2 cut(s)	2227, 2351
Cac8I	GCNNGC	4 cut(s)	379, 383, 1293, 2376
CaiI	CAGNNNCTG	1 cut(s)	953
CciI	TCATGA	1 cut(s)	930
Cfr13I	GGNCC	2 cut(s)	91, 1642
Cfr9I	CCCGGG	1 cut(s)	1683
Csp6I	GTAC	7 cut(s)	64, 402, 719, 1004, 1220, 1377, 2076
CspCI	CAANNNNNGTGG	2 cut(s)	1965, 2000
CviQI	GTAC	7 cut(s)	64, 402, 719, 1004, 1220, 1377, 2076
DpnI	GATC	6 cut(s)	303, 1287, 1461, 1938, 2118, 2155
DpnII	GATC	6 cut(s)	301, 1285, 1459, 1936, 2116, 2153
EaeI	YGGCCR	1 cut(s)	1453
Eam1104I	CTCTTC	7 cut(s)	174, 607, 656, 744, 897, 1692, 1782
EarI	CTCTTC	7 cut(s)	174, 607, 656, 744, 897, 1692, 1782
Ecl136II	GAGCTC	1 cut(s)	1399
Eco130I	CCWWGG	4 cut(s)	251, 1254, 1920, 1983
Eco24I	GRGCYC	2 cut(s)	1401, 1764
Eco53kI	GAGCTC	1 cut(s)	1399
Eco57I	CTGAAG	4 cut(s)	1716, 1902, 2076, 2376
Eco88I	CYCGRG	2 cut(s)	1683, 1743
EcoICRI	GAGCTC	1 cut(s)	1399
EcoO109I	RGGNCCY	1 cut(s)	1642
EcoRI	GAATTC	1 cut(s)	2002
EcoRII	CCWGG	2 cut(s)	1455, 2007
EcoT14I	CCWWGG	4 cut(s)	251, 1254, 1920, 1983
EcoT38I	GRGCYC	2 cut(s)	1401, 1764
ErhI	CCWWGG	4 cut(s)	251, 1254, 1920, 1983
FalI	AAGNNNNNCTT	2 cut(s)	412, 444
FaqI	GGGAC	3 cut(s)	56, 233, 1546
FauI	CCCGC	3 cut(s)	448, 1471, 2355
FauNDI	CATATG	1 cut(s)	347
FbaI	TGATCA	2 cut(s)	1285, 2116
Fnu4HI	GCNGC	9 cut(s)	735, 831, 867, 954, 1052, 1347, 1361, 1529, 2324
FokI	GGATG	8 cut(s)	89, 589, 1172, 1820, 2023, 2301, 2308, 2352
FriOI	GRGCYC	2 cut(s)	1401, 1764
Fsp4HI	GCNGC	9 cut(s)	735, 831, 867, 954, 1052, 1347, 1361, 1529, 2324
FspBI	CTAG	6 cut(s)	252, 857, 1010, 1323, 1368, 2096
GluI	GCNGC	9 cut(s)	735, 831, 867, 954, 1052, 1347, 1361, 1529, 2324
GsaI	CCCAGC	1 cut(s)	1568
GsuI	CTGGAG	2 cut(s)	2049, 2260
HaeIII	GGCC	5 cut(s)	92, 1246, 1455, 1643, 1823
HapII	CCGG	2 cut(s)	1541, 1684
HincII	GTYRAC	2 cut(s)	1171, 1209
HindII	GTYRAC	2 cut(s)	1171, 1209
HindIII	AAGCTT	4 cut(s)	228, 527, 1150, 2058
HpaII	CCGG	2 cut(s)	1541, 1684
HphI	GGTGA	3 cut(s)	254, 535, 685
Hpy166II	GTNNAC	3 cut(s)	86, 1171, 1209
Hpy8I	GTNNAC	3 cut(s)	86, 1171, 1209
HpyAV	CCTTC	4 cut(s)	305, 315, 1242, 1877
HpyCH4III	ACNGT	5 cut(s)	211, 363, 882, 1600, 1980
HpyCH4IV	ACGT	1 cut(s)	811
HpyF10VI	GCNNNNNNNGC	7 cut(s)	734, 866, 953, 1133, 1405, 1580, 1661
HpySE526I	ACGT	1 cut(s)	811
Kpn2I	TCCGGA	1 cut(s)	1540
Ksp22I	TGATCA	2 cut(s)	1285, 2116
Kzo9I	GATC	6 cut(s)	301, 1285, 1459, 1936, 2116, 2153
LguI	GCTCTTC	1 cut(s)	744
LmnI	GCTCC	4 cut(s)	445, 703, 1404, 1759
Lsp1109I	GCAGC	8 cut(s)	842, 853, 940, 1063, 1333, 1372, 1540, 2335
LweI	GCATC	8 cut(s)	442, 484, 489, 567, 940, 987, 1123, 2286
MaeI	CTAG	6 cut(s)	252, 857, 1010, 1323, 1368, 2096
MaeII	ACGT	1 cut(s)	811
MaeIII	GTNAC	3 cut(s)	1078, 1946, 2301
MalI	GATC	6 cut(s)	303, 1287, 1461, 1938, 2118, 2155
MboI	GATC	6 cut(s)	301, 1285, 1459, 1936, 2116, 2153
MfeI	CAATTG	2 cut(s)	309, 986
MflI	RGATCY	2 cut(s)	301, 1459
MhlI	GDGCHC	3 cut(s)	730, 1401, 1764
MlsI	TGGCCA	1 cut(s)	1455
MluNI	TGGCCA	1 cut(s)	1455
MlyI	GAGTC	8 cut(s)	767, 1064, 1204, 1348, 1379, 1999, 2117, 2251
MmeI	TCCRAC	1 cut(s)	444
Mox20I	TGGCCA	1 cut(s)	1455
MroI	TCCGGA	1 cut(s)	1540
MroXI	GAANNNNTTC	1 cut(s)	1891
MscI	TGGCCA	1 cut(s)	1455
MseI	TTAA	5 cut(s)	414, 777, 791, 1275, 2250
MslI	CAYNNNNRTG	2 cut(s)	1059, 1061
Msp20I	TGGCCA	1 cut(s)	1455
MspA1I	CMGCKG	2 cut(s)	1531, 2168
MspI	CCGG	2 cut(s)	1541, 1684
MspR9I	CCNGG	4 cut(s)	1457, 1684, 1685, 2009
MunI	CAATTG	2 cut(s)	309, 986
Mva1269I	GAATGC	2 cut(s)	694, 1129
MvaI	CCWGG	2 cut(s)	1457, 2009
MvnI	CGCG	1 cut(s)	2350
MwoI	GCNNNNNNNGC	7 cut(s)	734, 866, 953, 1133, 1405, 1580, 1661
NciI	CCSGG	2 cut(s)	1684, 1685
NcoI	CCATGG	1 cut(s)	1920
NdeI	CATATG	1 cut(s)	347
NdeII	GATC	6 cut(s)	301, 1285, 1459, 1936, 2116, 2153
NlaIV	GGNNCC	6 cut(s)	303, 727, 1183, 1461, 1644, 1761
NmeAIII	GCCGAG	1 cut(s)	1192
NmuCI	GTSAC	1 cut(s)	1946
NspI	RCATGY	3 cut(s)	381, 1220, 2330
NspV	TTCGAA	1 cut(s)	13
PaeI	GCATGC	1 cut(s)	381
PaeR7I	CTCGAG	1 cut(s)	1743
PagI	TCATGA	1 cut(s)	930
PaqCI	CACCTGC	1 cut(s)	2227
PciSI	GCTCTTC	1 cut(s)	744
PcsI	WCGNNNNNNNCGW	1 cut(s)	1219
PctI	GAATGC	2 cut(s)	694, 1129
PdmI	GAANNNNTTC	1 cut(s)	1891
PfeI	GAWTC	9 cut(s)	117, 547, 676, 1100, 1612, 1892, 1901, 2162, 2276
PflMI	CCANNNNNTGG	1 cut(s)	311
PkrI	GCNGC	9 cut(s)	736, 832, 868, 955, 1053, 1348, 1362, 1530, 2325
PleI	GAGTC	8 cut(s)	766, 1064, 1204, 1348, 1379, 1998, 2117, 2250
PpsI	GAGTC	8 cut(s)	766, 1064, 1204, 1348, 1379, 1998, 2117, 2250
PshAI	GACNNNNGTC	1 cut(s)	2241
PshBI	ATTAAT	2 cut(s)	414, 2250
Psp124BI	GAGCTC	1 cut(s)	1401
Psp1406I	AACGTT	1 cut(s)	811
Psp6I	CCWGG	2 cut(s)	1455, 2007
PspFI	CCCAGC	1 cut(s)	1564
PspGI	CCWGG	2 cut(s)	1455, 2007
PspN4I	GGNNCC	6 cut(s)	303, 727, 1183, 1461, 1644, 1761
PspPI	GGNCC	2 cut(s)	91, 1642
PstI	CTGCAG	1 cut(s)	871
PstNI	CAGNNNCTG	1 cut(s)	953
PsuI	RGATCY	2 cut(s)	301, 1459
PvuII	CAGCTG	2 cut(s)	1531, 2168
RsaI	GTAC	7 cut(s)	65, 403, 720, 1005, 1221, 1378, 2077
RsaNI	GTAC	7 cut(s)	64, 402, 719, 1004, 1220, 1377, 2076
RseI	CAYNNNNRTG	2 cut(s)	1059, 1061
SacI	GAGCTC	1 cut(s)	1401
SapI	GCTCTTC	1 cut(s)	744
SaqAI	TTAA	5 cut(s)	414, 777, 791, 1275, 2250
SatI	GCNGC	9 cut(s)	735, 831, 867, 954, 1052, 1347, 1361, 1529, 2324
Sau3AI	GATC	6 cut(s)	301, 1285, 1459, 1936, 2116, 2153
Sau96I	GGNCC	2 cut(s)	91, 1642
ScaI	AGTACT	2 cut(s)	65, 1005
SchI	GAGTC	8 cut(s)	767, 1064, 1204, 1348, 1379, 1999, 2117, 2251
ScrFI	CCNGG	4 cut(s)	1457, 1684, 1685, 2009
SduI	GDGCHC	3 cut(s)	730, 1401, 1764
SfaNI	GCATC	8 cut(s)	442, 484, 489, 567, 940, 987, 1123, 2286
SfcI	CTRYAG	6 cut(s)	867, 1514, 1659, 1704, 1857, 1896
Sfr274I	CTCGAG	1 cut(s)	1743
SfuI	TTCGAA	1 cut(s)	13
SlaI	CTCGAG	1 cut(s)	1743
SmaI	CCCGGG	1 cut(s)	1685
SmiMI	CAYNNNNRTG	2 cut(s)	1059, 1061
SmlI	CTYRAG	1 cut(s)	1743
SmoI	CTYRAG	1 cut(s)	1743
SphI	GCATGC	1 cut(s)	381
SsiI	CCGC	5 cut(s)	455, 521, 734, 1464, 2348
SspI	AATATT	1 cut(s)	654
SspMI	CTAG	6 cut(s)	252, 857, 1010, 1323, 1368, 2096
SstI	GAGCTC	1 cut(s)	1401
StyD4I	CCNGG	4 cut(s)	1455, 1682, 1683, 2007
StyI	CCWWGG	4 cut(s)	251, 1254, 1920, 1983
TaaI	ACNGT	5 cut(s)	211, 363, 882, 1600, 1980
TaiI	ACGT	1 cut(s)	814
TaqI	TCGA	3 cut(s)	13, 1744, 1939
TaqII	GACCGA	1 cut(s)	654
TatI	WGTACW	5 cut(s)	63, 718, 1003, 1376, 2075
TauI	GCSGC	1 cut(s)	737
TfiI	GAWTC	9 cut(s)	117, 547, 676, 1100, 1612, 1892, 1901, 2162, 2276
Tru1I	TTAA	5 cut(s)	414, 777, 791, 1275, 2250
Tru9I	TTAA	5 cut(s)	414, 777, 791, 1275, 2250
TscAI	CASTG	5 cut(s)	93, 339, 1001, 1983, 2208
TseFI	GTSAC	1 cut(s)	1946
TseI	GCWGC	8 cut(s)	830, 866, 953, 1051, 1346, 1360, 1528, 2323
Tsp45I	GTSAC	1 cut(s)	1946
TspMI	CCCGGG	1 cut(s)	1683
TspRI	CASTG	5 cut(s)	93, 339, 1001, 1983, 2208
Van91I	CCANNNNNTGG	1 cut(s)	311
VspI	ATTAAT	2 cut(s)	414, 2250
XapI	RAATTY	6 cut(s)	56, 273, 820, 1315, 2002, 2020
XbaI	TCTAGA	2 cut(s)	1009, 1367
XceI	RCATGY	3 cut(s)	381, 1220, 2330
XhoI	CTCGAG	1 cut(s)	1743
XmaI	CCCGGG	1 cut(s)	1683
XmaJI	CCTAGG	1 cut(s)	251
XmnI	GAANNNNTTC	1 cut(s)	1891
XspI	CTAG	6 cut(s)	252, 857, 1010, 1323, 1368, 2096
ZrmI	AGTACT	2 cut(s)	65, 1005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.