Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0005841

Physical Location & Seq

Genomic Coordinates Reverse (-)

3629718 .. 3638305

Gene Structure 8588 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G074100.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3411 bp

ATGAGAACTTGTAATTGCGAATCGGAGCCTGAGCCCATGGAATCAGACTCTCCAGATGATTTTCGTCGAGACTCACTAGACTTTGATCACTGGACTTCACTCATTTCAGAGATAGAGACTGCATATTCTGATGACGTAGAGAAAATATCTTCAGTTTATGACTCGTTCTTGTCCGAGTTTCCGCTGTGCCATGGATACTGGAGGAGGTACGCTGATCTTAAGGGCCGCTTATGCAGCGTTGACAAAGTTGTTCAAGTTTTCGAACGAGCGGTGCAATCAGCAACGTACTCTGTTCCCCTGTGGGTGGACTACTGTAACTTCGCTATGGCAGCTTTTGAAGACCCATCTGACATTCGCAGATTATTTCAGAGAGGCATGTCATTTGTTGGAAAGGATTACTCATGCCATACTTTGTGGGACAAATACATTGAATTTGAGTATTCTCAGCAGCAATGGAGTTCGCTGCCCCAGATTTACATCCAAGCTCTTAGATTTCCTACCAAAAAGTTGCATCGTTATTACGAAAGTTTGAAGAAGTTCGCTGCCTCATGTGAAGAGGAGATGAAATGCCAGAGTAGTTCTACTGTAGATTCGCAATCAGAAACTGTGCTTGATAGTGAAGCCCCTACAATTTATAGAGATGATGAAATTGCTCTTGTTGCCAAAGACTTGCTTGATCCACCAATTAGCTTAGAAAGGTCTAAAGCACTGCAAAAATACATATATGTCGGAAAGCAGTTGTATCAGGAAGCTTGTCGGCTGGATGAAACAATTCGTACTTTTGAGATTAATATAAGGAGGTCTTACTTCCATGTCAAGCCAATTGATGTGGGTCAGTTGGAAAATTGGCATCACTATCTGGACTTTGTTGAGATCCAAGGGGATTTTGACTGGGCTGTTAAATTTTATGAGAGATGTTTGATTCCGTGTGCCAATTACCCTGAGTTTTGGATGCGTTATGTGGAATTCATGGAAATCAACGGAGGAAGAGAGATTGCAAATTATGCTCTTGACCGAGCAACCCAAATATTTATGAAGAGACTGTCGGTGATTCACCTTTTCAATGCCAGGTTTAAGGAGAAAATAGGAGATGTATCTGGTGCCCGTGCTGCTTTTCCTAAATGTGATACAGAATCAGATTCCCAGTTTGTGAAGAATGTTATGTTAAAGGCTAATATGGAAAAACGTATGGGAAATTTCGCAGTAGCTTCCAATATATACAAAGAAGCACTAGAAATGGCGGCAGAGAAGAAAAAGTTGCATACTCTTCCTATTTTATATGTTCATTTTTCCCGACTTACCTACATGATGACTGATAGTGCAGATGCTGCCAGAGATGTCTTGATAGATGGCATCAAACACTTGCCTCATTGCAAATCACTTCTAGAGGAGTTGATAAACTTTTCAATTATGCATGGAGGGAAGCGACACCTAAACGTGGTAGATTCTATTGTAGCCACTGCAATATCTCCACAGTCAAGTGTATCTGATGTTCTGAATGCAAAAGATGCAGAGGATATTTCAAGCTTATATTTAGAGTTTGTTGACCTATGTGGAACTATACATGAAGTAAGAAAGGTGTGGAATCGGCATGTACGATTGTTCCCATCCTCTACTAGGAGAACTTTTGATCAGCATGCTACATTTACAAAACTTTTGAAATTGGCTAGAGGAACAAAGGAAACATTGGTTGCTCAGCCTCAGCAGCCATCTGGAGATTGTAGTTCTGACTCCCTGATTGAGCTCCCATTGCATGACAGTAAAATGTTATTGCCAGACAATCATAAAATCGAGTCTGGCCAGGATCCTACTGACCAGATATGTGACCAGAAATTGTCATCTCCCGGAAGTCAACTTGAGAAGACTACTTCTGACAAGCTTCAACCAAGGCAACCTGAAAACATACAGGAAACGCTGAAACTGCCATCTCTAGAAGTTTCAAAAGAGCAATCCAGAGATGATACACCAGAAGCAAATCTGTCATCTGTAGATTTAGTCATAGTGAAGCAGGTATCTCCTGAAGTTTCTGAGGAGCCCAGAGAAAATACTCCTGAACCGAAGGCATTATCTGTTGAATTAGGATGTCAAGTTGCTGAAGGAAATGATTCTGTAGAACCTTCACAAGAAGGCACAAACAGGAGTGATGCTAATCGAGAGTGTGATAATAAGTCTGAACAAGACCTGAAGCCACTGTCGTTAGAGTGTCTTTCTCTAAATTCCCAGGAGAATATAAATCTGGATTTAATACCCCCCATTTATCTCAACTGCGAAGGTTCTCAAGAAACCTGTACTTCAAATGGAAGGAAGCTAGAGAGCAATTGCAAATCTAATGAAGACTCTTATATGTACAGCCCAAGAAAGGCCAGAGCTTTGGAGACGGCTGGAAATAAAGTGGTTAATCCTATTTCAACACATGCACTTTCTCAACCAGCTGTGAATAGTTACGGAGACTGGCATCAAAATAATCGTTCTGGTAAAGTTCGTAGAGATTCCAAATTTGGGTTTCGGGGACGTTTACAAAGAAAATCATATCAGCAGCAGCCAGTTTCCCCACAAAAATACCCACAAACTGAAGTGGGTGGTCCAATGCCTGGGACTGGCAGTCTATGTCAACCCTCTCAATTTGTGTCTTCACAGAGCCCACAAATTCAGCAAGGCAGCCAGGATCATAATCCGTATCAAGCAGCAGCCACTCCTGCTAATGTAATGGCACCTAAGGCTTGGCATATGCAAAATGTACCACAACCAAATTATGCCTCTTCATGTCAGCCCCAGTTGCCTGTCCAATCTGTTGTTCCACAGGCATCTCAAGGATCAATTTTAGGGCAGTACGGGATGCAGAATAGTCAAGCATATAATCAGATGTGGCAATATTATTACTACCAGCAGCAGCAGCAGCAGTTCCTTCTTCAACAACAGCTGCATCAAACACAGCAGCAACAACAACAGCCCCAGCCCCAGCCCCAGCAGCAGCAGGTCTTGTTGCAACAGTATCAGCAGCAGCCGCAACAACTTCAACAATACTATGGTCAGATGCAACAGCAGCAATTACAGACACAACACAATATGCAGCAACAGATTCCTTTGCAACAACAGCAATATAATCAGCAGTTGCAAATGCAACAACAGCAACTTCAGCAACCTCATCAGCAGCAGCAACTTCAGGAACAACAGCATCTGAGTTACATGCAGAACAATCAGCAGCCACTCCAACAGCAATCACTTATGCAGGAGCAGCAGCAGCAGCAAATTAGTCCTGGGATTAAGCATGACAACTACTACCATCAGGATCAAGCACCTGTGCCACCAAATAATTCTGATAGCCATGGAACAGTTGTATCTTCCGCATCTCCTCATACGCAGACAGAAATGAAGGCAGATGCCCCGGCAGGCAACACGAGCATGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000245 GO:0000375 GO:0000377 GO:0000395 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005685 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0065003 GO:0071004 GO:0071010 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1137

Amino Acids

130.09

Weight (kDa)

5.51

Isoelectric Point (pI)

67.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005841)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46400 AT5G46400 AT5G46400
fragaria_vesca	FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350
malus_domestica	MD10G1267400.v1.1
prunus_persica	Prupe.4G074100_v2.0.a1 Prupe.4G074100_v2.0.a1 Prupe.4G074100_v2.0.a1
pyrus_communis	pycom10g22340
rosa_chinensis	RchiOBHm_Chr5g0012961
rosa_laevigata	RLG00000031972
rosa_multiflora	Rmu_sc0006885.1_g000007 Rmu_sc0010837.1_g000003
rosa_roxburghii	Rroxscaffold_1G00063630
rosa_rugosa	Rorug05G0005500
rosa_samantha	Rh5AG099900 Rh5BG096600 Rh5CG108800 Rh5DG095300
rosa_wichuraiana	Rw5G008720 Rw5G008730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1999, 2965
AccB1I	GGYRCC	2 cut(s)	1100, 2710
AccB7I	CCANNNNNTGG	1 cut(s)	2591
AccBSI	CCGCTC	1 cut(s)	269
AciI	CCGC	6 cut(s)	182, 226, 269, 1241, 3005, 3345
AclWI	GGATC	7 cut(s)	671, 868, 1799, 1812, 2673, 2821, 3297
AcoI	YGGCCR	1 cut(s)	1798
AcsI	RAATTY	7 cut(s)	431, 902, 965, 1195, 2215, 2495, 2646
AcuI	CTGAAG	7 cut(s)	135, 2040, 2115, 2204, 2592, 3119, 3146
AfaI	GTAC	8 cut(s)	209, 287, 778, 1596, 2290, 2348, 2739, 2831
AfiI	CCNNNNNNNGG	7 cut(s)	304, 1438, 1617, 2359, 2499, 2591, 2597
AflII	CTTAAG	1 cut(s)	218
AhdI	GACNNNNNGTC	1 cut(s)	2601
AjnI	CCWGG	6 cut(s)	1067, 1800, 2220, 2590, 2661, 3256
AjuI	GAANNNNNNNTTGG	2 cut(s)	2778, 2810
Alw21I	GWGCWC	1 cut(s)	1746
Alw26I	GTCTC	5 cut(s)	63, 110, 1033, 2369, 2442
AlwI	GGATC	7 cut(s)	671, 868, 1799, 1812, 2673, 2821, 3297
AlwNI	CAGNNNCTG	3 cut(s)	605, 1328, 3178
AoxI	GGCC	3 cut(s)	223, 1798, 2361
ApoI	RAATTY	7 cut(s)	431, 902, 965, 1195, 2215, 2495, 2646
AseI	ATTAAT	1 cut(s)	789
Asp700I	GAANNNNTTC	3 cut(s)	536, 771, 2104
AspS9I	GGNCC	2 cut(s)	223, 2582
AsuC2I	CCSGG	2 cut(s)	1845, 3386
AsuHPI	GGTGA	2 cut(s)	1046, 1060
AsuII	TTCGAA	1 cut(s)	261
AvaII	GGWCC	1 cut(s)	2582
AxyI	CCTNAGG	1 cut(s)	2715
BaeGI	GKGCMC	1 cut(s)	1105
BaeI	ACNNNNGTAYC	2 cut(s)	3321, 3354
BalI	TGGCCA	1 cut(s)	1800
BamHI	GGATCC	1 cut(s)	1804
BanI	GGYRCC	2 cut(s)	1100, 2710
BanII	GRGCYC	4 cut(s)	36, 1746, 2037, 2642
BauI	CACGAG	1 cut(s)	3397
BbsI	GAAGAC	4 cut(s)	345, 1868, 2340, 2622
Bbv12I	GWGCWC	1 cut(s)	1746
BbvCI	CCTCAGC	1 cut(s)	1701
BccI	CCATC	6 cut(s)	352, 1343, 1615, 1717, 1933, 3291
BceAI	ACGGC	1 cut(s)	2394
BciT130I	CCWGG	6 cut(s)	1069, 1802, 2222, 2592, 2663, 3258
BciVI	GTATCC	1 cut(s)	188
BclI	TGATCA	2 cut(s)	85, 1630
BcnI	CCSGG	2 cut(s)	1845, 3386
BcoDI	GTCTC	5 cut(s)	63, 110, 1033, 2369, 2442
BfaI	CTAG	7 cut(s)	77, 1232, 1385, 1617, 1668, 1931, 2309
BfmI	CTRYAG	3 cut(s)	585, 1986, 2109
BfrI	CTTAAG	1 cut(s)	218
BfuAI	ACCTGC	2 cut(s)	1999, 2965
BfuI	GTATCC	1 cut(s)	188
BlpI	GCTNAGC	1 cut(s)	1695
Bme1390I	CCNGG	8 cut(s)	1069, 1802, 1845, 2222, 2592, 2663, 3258, 3386
Bme18I	GGWCC	1 cut(s)	2582
BmeRI	GACNNNNNGTC	1 cut(s)	2601
BmgT120I	GGNCC	2 cut(s)	223, 2582
BmiI	GGNNCC	5 cut(s)	27, 1102, 1806, 2034, 2712
BmrFI	CCNGG	8 cut(s)	1069, 1802, 1845, 2222, 2592, 2663, 3258, 3386
BmrI	ACTGGG	3 cut(s)	901, 1138, 2767
BmuI	ACTGGG	3 cut(s)	901, 1138, 2767
BpiI	GAAGAC	4 cut(s)	345, 1868, 2340, 2622
BpmI	CTGGAG	3 cut(s)	36, 220, 1734
Bpu10I	CCTNAGC	2 cut(s)	30, 1701
Bpu1102I	GCTNAGC	1 cut(s)	1695
Bpu14I	TTCGAA	1 cut(s)	261
BpuEI	CTTGAG	3 cut(s)	1877, 2262, 2793
BpuMI	CCSGG	2 cut(s)	1845, 3386
BsaBI	GATNNNNATC	3 cut(s)	476, 2148, 2670
BsaJI	CCNNGG	9 cut(s)	36, 190, 877, 1886, 2220, 2591, 3257, 3325, 3384
Bsc4I	CCNNNNNNNGG	7 cut(s)	304, 1438, 1617, 2359, 2499, 2591, 2597
Bse1I	ACTGG	8 cut(s)	95, 203, 896, 1144, 2456, 2543, 2602, 2773
Bse21I	CCTNAGG	1 cut(s)	2715
Bse3DI	GCAATG	3 cut(s)	458, 1369, 1748
Bse8I	GATNNNNATC	3 cut(s)	476, 2148, 2670
BseBI	CCWGG	6 cut(s)	1069, 1802, 2222, 2592, 2663, 3258
BseDI	CCNNGG	9 cut(s)	36, 190, 877, 1886, 2220, 2591, 3257, 3325, 3384
BseGI	GGATG	6 cut(s)	477, 769, 957, 1607, 2087, 2841
BseJI	GATNNNNATC	3 cut(s)	476, 2148, 2670
BseLI	CCNNNNNNNGG	7 cut(s)	304, 1438, 1617, 2359, 2499, 2591, 2597
BseMI	GCAATG	3 cut(s)	458, 1369, 1748
BseMII	CTCAG	7 cut(s)	21, 458, 933, 1709, 1715, 2019, 3170
BseNI	ACTGG	8 cut(s)	95, 203, 896, 1144, 2456, 2543, 2602, 2773
BseRI	GAGGAG	5 cut(s)	217, 572, 1403, 2045, 3342
BseSI	GKGCMC	1 cut(s)	1105
BseYI	CCCAGC	3 cut(s)	2952, 2958, 2964
BsgI	GTGCAG	1 cut(s)	1341
BshFI	GGCC	3 cut(s)	225, 1800, 2363
BshNI	GGYRCC	2 cut(s)	1100, 2710
BsiHKAI	GWGCWC	1 cut(s)	1746
BsiSI	CCGG	2 cut(s)	1845, 3386
BslFI	GGGAC	3 cut(s)	431, 2523, 2608
BslI	CCNNNNNNNGG	7 cut(s)	304, 1438, 1617, 2359, 2499, 2591, 2597
BsmAI	GTCTC	5 cut(s)	63, 110, 1033, 2369, 2442
BsmBI	CGTCTC	1 cut(s)	2369
BsmFI	GGGAC	3 cut(s)	431, 2523, 2608
BsmI	GAATGC	1 cut(s)	1504
BsnI	GGCC	3 cut(s)	225, 1800, 2363
Bsp119I	TTCGAA	1 cut(s)	261
Bsp1286I	GDGCHC	5 cut(s)	36, 1105, 1746, 2037, 2642
Bsp1407I	TGTACA	1 cut(s)	2346
Bsp143I	GATC	9 cut(s)	85, 214, 676, 873, 1630, 1804, 2665, 2813, 3289
Bsp1720I	GCTNAGC	1 cut(s)	1695
Bsp19I	CCATGG	3 cut(s)	36, 190, 3325
BspACI	CCGC	6 cut(s)	182, 226, 269, 1241, 3005, 3345
BspANI	GGCC	3 cut(s)	225, 1800, 2363
BspCNI	CTCAG	7 cut(s)	22, 457, 934, 1708, 1714, 2020, 3171
BspLI	GGNNCC	5 cut(s)	27, 1102, 1806, 2034, 2712
BspMI	ACCTGC	2 cut(s)	1999, 2965
BspPI	GGATC	7 cut(s)	671, 868, 1799, 1812, 2673, 2821, 3297
BspT104I	TTCGAA	1 cut(s)	261
BspT107I	GGYRCC	2 cut(s)	1100, 2710
BspTI	CTTAAG	1 cut(s)	218
BsrBI	CCGCTC	1 cut(s)	269
BsrDI	GCAATG	3 cut(s)	458, 1369, 1748
BsrGI	TGTACA	1 cut(s)	2346
BsrI	ACTGG	8 cut(s)	95, 203, 896, 1144, 2456, 2543, 2602, 2773
BssECI	CCNNGG	9 cut(s)	36, 190, 877, 1886, 2220, 2591, 3257, 3325, 3384
BssMI	GATC	9 cut(s)	85, 214, 676, 873, 1630, 1804, 2665, 2813, 3289
BssSI	CACGAG	1 cut(s)	3397
BssT1I	CCWWGG	5 cut(s)	36, 190, 877, 1886, 3325
Bst2BI	CACGAG	1 cut(s)	3397
Bst2UI	CCWGG	6 cut(s)	1069, 1802, 2222, 2592, 2663, 3258
Bst4CI	ACNGT	9 cut(s)	314, 586, 607, 1044, 1476, 1760, 2193, 2991, 3334
Bst6I	CTCTTC	5 cut(s)	549, 982, 1031, 1272, 2764
BstAFI	CTTAAG	1 cut(s)	218
BstAPI	GCANNNNNTGC	3 cut(s)	1004, 1328, 1508
BstAUI	TGTACA	1 cut(s)	2346
BstBI	TTCGAA	1 cut(s)	261
BstC8I	GCNNGC	3 cut(s)	1638, 3391, 3404
BstDSI	CCRYGG	3 cut(s)	36, 190, 3325
BstENI	CCTNNNNNAGG	1 cut(s)	1615
BstF5I	GGATG	6 cut(s)	477, 769, 957, 1607, 2087, 2841
BstKTI	GATC	9 cut(s)	88, 217, 679, 876, 1633, 1807, 2668, 2816, 3292
BstMAI	GTCTC	5 cut(s)	63, 110, 1033, 2369, 2442
BstMBI	GATC	9 cut(s)	85, 214, 676, 873, 1630, 1804, 2665, 2813, 3289
BstNI	CCWGG	6 cut(s)	1069, 1802, 2222, 2592, 2663, 3258
BstNSI	RCATGY	6 cut(s)	379, 1595, 1640, 2417, 3190, 3406
BstSCI	CCNGG	8 cut(s)	1067, 1800, 1843, 2220, 2590, 2661, 3256, 3384
BstSFI	CTRYAG	3 cut(s)	585, 1986, 2109
BstSLI	GKGCMC	1 cut(s)	1105
BstV2I	GAAGAC	4 cut(s)	345, 1868, 2340, 2622
BstX2I	RGATCY	2 cut(s)	873, 1804
BstXI	CCANNNNNNTGG	1 cut(s)	2371
BstYI	RGATCY	2 cut(s)	873, 1804
Bsu36I	CCTNAGG	1 cut(s)	2715
BsuI	GTATCC	1 cut(s)	188
BsuRI	GGCC	3 cut(s)	225, 1800, 2363
BtgI	CCRYGG	3 cut(s)	36, 190, 3325
BtsCI	GGATG	6 cut(s)	477, 769, 957, 1607, 2087, 2841
BtsI	GCAGTG	2 cut(s)	707, 1458
BtsIMutI	CAGTG	4 cut(s)	88, 707, 1458, 2189
BveI	ACCTGC	2 cut(s)	1999, 2965
Cac8I	GCNNGC	3 cut(s)	1638, 3391, 3404
CaiI	CAGNNNCTG	3 cut(s)	605, 1328, 3178
Cfr13I	GGNCC	2 cut(s)	223, 2582
Csp6I	GTAC	8 cut(s)	208, 286, 777, 1595, 2289, 2347, 2738, 2830
CspCI	CAANNNNNGTGG	2 cut(s)	810, 845
CviQI	GTAC	8 cut(s)	208, 286, 777, 1595, 2289, 2347, 2738, 2830
DpnI	GATC	9 cut(s)	87, 216, 678, 875, 1632, 1806, 2667, 2815, 3291
DpnII	GATC	9 cut(s)	85, 214, 676, 873, 1630, 1804, 2665, 2813, 3289
DriI	GACNNNNNGTC	1 cut(s)	2601
EaeI	YGGCCR	1 cut(s)	1798
Eam1104I	CTCTTC	5 cut(s)	549, 982, 1031, 1272, 2764
Eam1105I	GACNNNNNGTC	1 cut(s)	2601
EarI	CTCTTC	5 cut(s)	549, 982, 1031, 1272, 2764
Ecl136II	GAGCTC	1 cut(s)	1744
Eco130I	CCWWGG	5 cut(s)	36, 190, 877, 1886, 3325
Eco24I	GRGCYC	4 cut(s)	36, 1746, 2037, 2642
Eco47I	GGWCC	1 cut(s)	2582
Eco53kI	GAGCTC	1 cut(s)	1744
Eco57I	CTGAAG	7 cut(s)	135, 2040, 2115, 2204, 2592, 3119, 3146
Eco81I	CCTNAGG	1 cut(s)	2715
EcoICRI	GAGCTC	1 cut(s)	1744
EcoNI	CCTNNNNNAGG	1 cut(s)	1615
EcoRI	GAATTC	1 cut(s)	965
EcoRII	CCWGG	6 cut(s)	1067, 1800, 2220, 2590, 2661, 3256
EcoT14I	CCWWGG	5 cut(s)	36, 190, 877, 1886, 3325
EcoT22I	ATGCAT	1 cut(s)	1416
EcoT38I	GRGCYC	4 cut(s)	36, 1746, 2037, 2642
ErhI	CCWWGG	5 cut(s)	36, 190, 877, 1886, 3325
Esp3I	CGTCTC	1 cut(s)	2369
FalI	AAGNNNNNCTT	6 cut(s)	212, 244, 657, 689, 787, 819
FaqI	GGGAC	3 cut(s)	431, 2523, 2608
FauNDI	CATATG	1 cut(s)	2727
FbaI	TGATCA	2 cut(s)	85, 1630
FokI	GGATG	6 cut(s)	464, 776, 964, 1594, 2094, 2848
FriOI	GRGCYC	4 cut(s)	36, 1746, 2037, 2642
FspBI	CTAG	7 cut(s)	77, 1232, 1385, 1617, 1668, 1931, 2309
GsaI	CCCAGC	3 cut(s)	2956, 2962, 2968
GsuI	CTGGAG	3 cut(s)	36, 220, 1734
HaeIII	GGCC	3 cut(s)	225, 1800, 2363
HapII	CCGG	2 cut(s)	1845, 3386
HincII	GTYRAC	4 cut(s)	241, 1546, 1853, 2612
HindII	GTYRAC	4 cut(s)	241, 1546, 1853, 2612
HindIII	AAGCTT	3 cut(s)	750, 1525, 1877
HpaII	CCGG	2 cut(s)	1845, 3386
HphI	GGTGA	2 cut(s)	1046, 1060
Hpy166II	GTNNAC	6 cut(s)	241, 307, 1546, 1853, 2516, 2612
Hpy8I	GTNNAC	6 cut(s)	241, 307, 1546, 1853, 2516, 2612
Hpy99I	CGWCG	1 cut(s)	69
HpyAV	CCTTC	8 cut(s)	2053, 2090, 2120, 2127, 2264, 2295, 2915, 3367
HpyCH4III	ACNGT	9 cut(s)	314, 586, 607, 1044, 1476, 1760, 2193, 2991, 3334
HpyCH4IV	ACGT	5 cut(s)	135, 284, 1186, 1437, 2512
HpySE526I	ACGT	5 cut(s)	135, 284, 1186, 1437, 2512
Ksp22I	TGATCA	2 cut(s)	85, 1630
Kzo9I	GATC	9 cut(s)	85, 214, 676, 873, 1630, 1804, 2665, 2813, 3289
LmnI	GCTCC	4 cut(s)	25, 1749, 2032, 3232
MaeI	CTAG	7 cut(s)	77, 1232, 1385, 1617, 1668, 1931, 2309
MaeII	ACGT	5 cut(s)	135, 284, 1186, 1437, 2512
MaeIII	GTNAC	4 cut(s)	314, 1823, 2441, 3182
MalI	GATC	9 cut(s)	87, 216, 678, 875, 1632, 1806, 2667, 2815, 3291
MbiI	CCGCTC	1 cut(s)	269
MboI	GATC	9 cut(s)	85, 214, 676, 873, 1630, 1804, 2665, 2813, 3289
MfeI	CAATTG	2 cut(s)	822, 2317
MflI	RGATCY	2 cut(s)	873, 1804
MhlI	GDGCHC	5 cut(s)	36, 1105, 1746, 2037, 2642
MlsI	TGGCCA	1 cut(s)	1800
MluNI	TGGCCA	1 cut(s)	1800
MlyI	GAGTC	6 cut(s)	41, 65, 155, 1724, 1802, 2330
MmeI	TCCRAC	4 cut(s)	367, 709, 819, 3235
Mox20I	TGGCCA	1 cut(s)	1800
Mph1103I	ATGCAT	1 cut(s)	1416
MroXI	GAANNNNTTC	3 cut(s)	536, 771, 2104
MscI	TGGCCA	1 cut(s)	1800
MseI	TTAA	8 cut(s)	219, 789, 900, 1074, 1166, 2243, 2397, 3264
MslI	CAYNNNNRTG	1 cut(s)	3401
Msp20I	TGGCCA	1 cut(s)	1800
MspA1I	CMGCKG	3 cut(s)	184, 2432, 2920
MspCI	CTTAAG	1 cut(s)	218
MspI	CCGG	2 cut(s)	1845, 3386
MspR9I	CCNGG	8 cut(s)	1069, 1802, 1845, 2222, 2592, 2663, 3258, 3386
MunI	CAATTG	2 cut(s)	822, 2317
Mva1269I	GAATGC	1 cut(s)	1504
MvaI	CCWGG	6 cut(s)	1069, 1802, 2222, 2592, 2663, 3258
NciI	CCSGG	2 cut(s)	1845, 3386
NcoI	CCATGG	3 cut(s)	36, 190, 3325
NdeI	CATATG	1 cut(s)	2727
NdeII	GATC	9 cut(s)	85, 214, 676, 873, 1630, 1804, 2665, 2813, 3289
NlaIV	GGNNCC	5 cut(s)	27, 1102, 1806, 2034, 2712
NmuCI	GTSAC	1 cut(s)	1823
NsiI	ATGCAT	1 cut(s)	1416
NspI	RCATGY	6 cut(s)	379, 1595, 1640, 2417, 3190, 3406
NspV	TTCGAA	1 cut(s)	261
PaeI	GCATGC	2 cut(s)	1640, 3406
PcsI	WCGNNNNNNNCGW	1 cut(s)	1594
PctI	GAATGC	1 cut(s)	1504
PdmI	GAANNNNTTC	3 cut(s)	536, 771, 2104
PflMI	CCANNNNNTGG	1 cut(s)	2591
PfoI	TCCNGGA	1 cut(s)	1843
PleI	GAGTC	6 cut(s)	41, 65, 155, 1724, 1801, 2330
PpsI	GAGTC	6 cut(s)	41, 65, 155, 1724, 1801, 2330
PshBI	ATTAAT	1 cut(s)	789
Psp124BI	GAGCTC	1 cut(s)	1746
Psp6I	CCWGG	6 cut(s)	1067, 1800, 2220, 2590, 2661, 3256
PspFI	CCCAGC	3 cut(s)	2952, 2958, 2964
PspGI	CCWGG	6 cut(s)	1067, 1800, 2220, 2590, 2661, 3256
PspN4I	GGNNCC	5 cut(s)	27, 1102, 1806, 2034, 2712
PspPI	GGNCC	2 cut(s)	223, 2582
PsrI	GAACNNNNNNTAC	2 cut(s)	1476, 1508
PstNI	CAGNNNCTG	3 cut(s)	605, 1328, 3178
PsuI	RGATCY	2 cut(s)	873, 1804
PvuII	CAGCTG	2 cut(s)	2432, 2920
RsaI	GTAC	8 cut(s)	209, 287, 778, 1596, 2290, 2348, 2739, 2831
RsaNI	GTAC	8 cut(s)	208, 286, 777, 1595, 2289, 2347, 2738, 2830
RseI	CAYNNNNRTG	1 cut(s)	3401
SacI	GAGCTC	1 cut(s)	1746
SaqAI	TTAA	8 cut(s)	219, 789, 900, 1074, 1166, 2243, 2397, 3264
Sau3AI	GATC	9 cut(s)	85, 214, 676, 873, 1630, 1804, 2665, 2813, 3289
Sau96I	GGNCC	2 cut(s)	223, 2582
SchI	GAGTC	6 cut(s)	41, 65, 155, 1724, 1802, 2330
ScrFI	CCNGG	8 cut(s)	1069, 1802, 1845, 2222, 2592, 2663, 3258, 3386
SduI	GDGCHC	5 cut(s)	36, 1105, 1746, 2037, 2642
SfcI	CTRYAG	3 cut(s)	585, 1986, 2109
SfuI	TTCGAA	1 cut(s)	261
SinI	GGWCC	1 cut(s)	2582
SmiMI	CAYNNNNRTG	1 cut(s)	3401
SmlI	CTYRAG	4 cut(s)	218, 1856, 2277, 2808
SmoI	CTYRAG	4 cut(s)	218, 1856, 2277, 2808
SphI	GCATGC	2 cut(s)	1640, 3406
SsiI	CCGC	6 cut(s)	182, 226, 269, 1241, 3005, 3345
SspI	AATATT	2 cut(s)	1029, 2873
SspMI	CTAG	7 cut(s)	77, 1232, 1385, 1617, 1668, 1931, 2309
SstI	GAGCTC	1 cut(s)	1746
StyD4I	CCNGG	8 cut(s)	1067, 1800, 1843, 2220, 2590, 2661, 3256, 3384
StyI	CCWWGG	5 cut(s)	36, 190, 877, 1886, 3325
TaaI	ACNGT	9 cut(s)	314, 586, 607, 1044, 1476, 1760, 2193, 2991, 3334
TaiI	ACGT	5 cut(s)	138, 287, 1189, 1440, 2515
TaqI	TCGA	4 cut(s)	67, 261, 1791, 2152
TaqII	GACCGA	1 cut(s)	1029
TatI	WGTACW	2 cut(s)	2288, 2346
TauI	GCSGC	3 cut(s)	228, 1244, 3007
Tru1I	TTAA	8 cut(s)	219, 789, 900, 1074, 1166, 2243, 2397, 3264
Tru9I	TTAA	8 cut(s)	219, 789, 900, 1074, 1166, 2243, 2397, 3264
TscAI	CASTG	4 cut(s)	95, 714, 1465, 2196
TseFI	GTSAC	1 cut(s)	1823
Tsp45I	GTSAC	1 cut(s)	1823
TspGWI	ACGGA	4 cut(s)	915, 996, 2460, 2664
TspRI	CASTG	4 cut(s)	95, 714, 1465, 2196
Van91I	CCANNNNNTGG	1 cut(s)	2591
Vha464I	CTTAAG	1 cut(s)	218
VpaK11BI	GGWCC	1 cut(s)	2582
VspI	ATTAAT	1 cut(s)	789
XagI	CCTNNNNNAGG	1 cut(s)	1615
XapI	RAATTY	7 cut(s)	431, 902, 965, 1195, 2215, 2495, 2646
XbaI	TCTAGA	2 cut(s)	1384, 1930
XceI	RCATGY	6 cut(s)	379, 1595, 1640, 2417, 3190, 3406
XmnI	GAANNNNTTC	3 cut(s)	536, 771, 2104
XspI	CTAG	7 cut(s)	77, 1232, 1385, 1617, 1668, 1931, 2309
Zsp2I	ATGCAT	1 cut(s)	1416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.