Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0005841

Physical Location & Seq

Genomic Coordinates Reverse (-)

9459342 .. 9463658

Gene Structure 4317 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G008720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2607 bp

ATGTTCGTGCAGAGAGTGTCGGTGATTCATCTTTTGAATGCCAAGTTTAAGGAGCAAATAGGAGATGTACTTGGTGCCCGTGCGGCTCTTCTTCAATGTAATGCAGAGTCAGATACACACTTCGTTAAGAATGTTATCTTAAAGGCTAATATGGAAAAACGTTTGGGAAATTTCACAGCAGCTTCCACTATATTCAGAGAAGCTCTAGCAATGGCTGCAGAGAAGAAACAGTCGCATACTCTTCCTATTCTATATGTTCATTTCTCTCGCCTTACATTCATGATGACTGATAGTGCAGATGCTGCACGAGATGTCTTGATAGATGGCATCAAACAATTGCCTCACTGCAAAGTACTTCTAGAGGAGTTGATAAAGTTTGCAATGATGAATCGAGGGAAGCAGCACATAAATGTGATAGACTCTGTTGTAACCCGTGCTATATCTCAGGAATCAGGAGTATGCAATGGTCTGAATGCAAAAGATGCTGAGGATATTTCAAGCTTATTTTTAGAGTTTGTTGACCTCTGTGGAACCATCCATGAAGTAAGAAAGGTGTTGACTCGGCATGTACGATTGTTCCCTTCTTCCATTAGGCCATCTTCCTTGGGTCAGCAGTCTACCTTTAATGTTTATGATCAGCAAGCTACATTCACAAAGTCTTTGAATTTGCCTAGAGAAAAAGAGGAAACTTCTGCTGCTATGACTCAGCAGCCATCTAGAGATTGTACTTCTGACTCCATGATTGAGCTCCCGTTGCATGATGAAGTAATGTTATTGCCAGAAAATCATACTAAAGAGTGTGGCCAGGATCCCGCATACCAGCTATCAGACCAGACATTGCCATCAAAACAATTTGAAAATCTACAGGAAAGATTGCAGCTGACATCTCCGGAAGTTTCAAAAGAGCAGTCCCGAGCTAATGCACCAGAAGCAAATATATCCTCCACCGTGGTAGAAGTGAATCTGGTATCTCAGGAAGTATCTGACAAGGCCCCAGAAAATGCCCCTGTAGCAGAAGTGAAACAGGTATCCCGGGAAGTTTCTGAAGAGGCTACAGAAAATACCCATGTAGCAGAAGTGAAAAAGGTATCTCGAGAAGTTTCTGAGGAGCCCACAGAAAATATCCTTGTAGTAGAAGAGAAAAAAGTATCTCAGGAAGTTTCTGAGGAGGCCAGAGAAAACATCCCTAAACCAGAGATGTCGTCTGTAGAATTAGGATTTCAAGTTGCTGAAGGAAATGATTCTATAGAATCTTCACAAGAAAACACCATGGGAAGCAATGTTGATCGAGAGTGTGACTATAAGAGCGAACAAAACCCAAAGCCACTGTCCTTGGAGAGTCTTTCTTTGAATTCCCAGGAAAATACAAATTTGGATTTAGTATCATCCACTTCTCCCAAGTCTGAAGCTTCTCCAGAAACCTGTACTTCAAATGGAAAGAAGCTAGAGAGTGATTGCAACTCTGATCAAGACTCTTATATGCACAGCCCACGAAATGATAGATCGTTAGAATCAGCTGGAAATGAATTAGTCAATGCTATGCCTATCCCAGTGTTTTCTCAGCCACCTGCAAATAGTTGTGGAGACTGGAGTCAAATTAATCGTTCTGATAAAGTTGGTAAAGATTCCAAATTGGGCTTTCGGATGCAGTTACAAAAATCACATCCACAGCAGCATGTTCCTCCAAAGAAATACCCGCGAACTGAAGCAGGTCATCCAATGCCTGCAAGTCAAGGTCACCCCTCTATATTAACACCTTCACAAAACCAACAAATTCAGCAAGGCAGCCAGCAGGCCCAGCATCACAATCAGTATCAGGTAGCAAGTGGTCATGCTAATATAGCAGCACCTAATTCCGGGCCTATACCAAATGTACAAGCCGCCAATGATGCCTCTTCATCTCAGTCTCTATTGCCTGTCCAACCTGTTGCTCCACAGATGCCTCAGTCATCAGTATCAGGCAATGGGCAGTATGCGATGCAGAATCCTCAAGCATATAATCAGATGTGGCAATATTATTACTACCAGCAGCAGCAATCCCTTCTGCAACCACAGCAGCATCATCCCCAGCAGCAGCAGCAGTTGTTATTGCAACAGTATCAGCAGCAGCAGCAACTTCAACAATATTACGTTCAGATGCAACAGCAACAACTTCTTTTCCAACAACAGCAGCAATTTCAACCAACACAGCAACAACTTCCTTTGCAACAACAGCAACAACTTCCTTTGCAACAACAACAGCAATCTCAAGTACTAAAGCAGCTTCCTTTGCAAGAGCAGCAGCAATTTCAGCAACTACAGCAACAACTTCAGCAATTTCAACAACTGCAGCAACAACTTCCTGTACAACAACAACAACAATTTCCGTCGCAACAACAATACAATCCGCAATTGCAATTACAACAACAGCATCCATTCTATGTGCATAAGCATCAACTGCCACTCCAACAACAATCACATCTACAGGAACAACATCAAATCAATCAGTCATCGATTCAGCAGAACTACTCACACCATCAGGATCAAGCACAAAATTCAGATATTCATGGTGGGACGGTCATATCCTCCGTATCTCCTCACAGCCCAGTAGAACCTCCCCAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000245 GO:0000375 GO:0000377 GO:0000395 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005685 GO:0006139 GO:0006376 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0022607 GO:0022613 GO:0022618 GO:0030532 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045292 GO:0046483 GO:0065003 GO:0071004 GO:0071010 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

868

Amino Acids

97.9

Weight (kDa)

5.56

Isoelectric Point (pI)

75.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005841)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46400 AT5G46400 AT5G46400
fragaria_vesca	FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350 FvH4_3g06350
malus_domestica	MD10G1267400.v1.1
prunus_persica	Prupe.4G074100_v2.0.a1 Prupe.4G074100_v2.0.a1 Prupe.4G074100_v2.0.a1
pyrus_communis	pycom10g22340
rosa_chinensis	RchiOBHm_Chr5g0012961
rosa_laevigata	RLG00000031972
rosa_multiflora	Rmu_sc0006885.1_g000007 Rmu_sc0010837.1_g000003
rosa_roxburghii	Rroxscaffold_1G00063630
rosa_rugosa	Rorug05G0005500
rosa_samantha	Rh5AG099900 Rh5BG096600 Rh5CG108800 Rh5DG095300
rosa_wichuraiana	Rw5G008720 Rw5G008730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1576
Acc36I	ACCTGC	2 cut(s)	1576, 1700
AccB1I	GGYRCC	1 cut(s)	74
AccI	GTMKAC	1 cut(s)	617
AccII	CGCG	1 cut(s)	1699
AccIII	TCCGGA	1 cut(s)	889
AciI	CCGC	5 cut(s)	83, 813, 1697, 1881, 2387
AclI	AACGTT	1 cut(s)	160
AclWI	GGATC	3 cut(s)	803, 816, 2529
AcoI	YGGCCR	1 cut(s)	802
AcsI	RAATTY	6 cut(s)	169, 664, 1351, 1369, 1773, 2533
AcuI	CTGAAG	5 cut(s)	1065, 1251, 1425, 1725, 2294
AfaI	GTAC	8 cut(s)	69, 354, 570, 727, 1426, 1875, 2253, 2346
AfiI	CCNNNNNNNGG	1 cut(s)	1856
AjnI	CCWGG	2 cut(s)	804, 1356
Alw21I	GWGCWC	1 cut(s)	750
Alw26I	GTCTC	2 cut(s)	1578, 1911
AlwI	GGATC	3 cut(s)	803, 816, 2529
AlwNI	CAGNNNCTG	1 cut(s)	302
Ama87I	CYCGRG	3 cut(s)	912, 1032, 1092
Aor13HI	TCCGGA	1 cut(s)	889
AoxI	GGCC	6 cut(s)	593, 802, 990, 1170, 1794, 1859
ApoI	RAATTY	6 cut(s)	169, 664, 1351, 1369, 1773, 2533
ArsI	GACNNNNNNTTYG	4 cut(s)	893, 925, 1313, 1345
AseI	ATTAAT	1 cut(s)	1599
Asp700I	GAANNNNTTC	1 cut(s)	1240
AspS9I	GGNCC	3 cut(s)	991, 1795, 1859
AsuC2I	CCSGG	3 cut(s)	1033, 1034, 1858
AsuHPI	GGTGA	2 cut(s)	34, 1730
AvaI	CYCGRG	3 cut(s)	912, 1032, 1092
BaeGI	GKGCMC	1 cut(s)	79
BalI	TGGCCA	1 cut(s)	804
BamHI	GGATCC	1 cut(s)	808
BanI	GGYRCC	1 cut(s)	74
BanII	GRGCYC	2 cut(s)	750, 1113
BauI	CACGAG	1 cut(s)	306
Bbv12I	GWGCWC	1 cut(s)	750
BbvCI	CCTCAGC	1 cut(s)	486
BccI	CCATC	6 cut(s)	317, 542, 604, 721, 850, 2523
BciT130I	CCWGG	2 cut(s)	806, 1358
BciVI	GTATCC	1 cut(s)	1039
BclI	TGATCA	2 cut(s)	634, 1465
BcnI	CCSGG	3 cut(s)	1033, 1034, 1858
BcoDI	GTCTC	2 cut(s)	1578, 1911
BfaI	CTAG	5 cut(s)	206, 359, 672, 717, 1445
BfmI	CTRYAG	9 cut(s)	216, 863, 1008, 1053, 1206, 1245, 2297, 2327, 2462
BfuAI	ACCTGC	2 cut(s)	1576, 1700
BfuI	GTATCC	1 cut(s)	1039
BglI	GCCNNNNNGGC	1 cut(s)	83
BmcAI	AGTACT	2 cut(s)	354, 2253
Bme1390I	CCNGG	5 cut(s)	806, 1033, 1034, 1358, 1858
BmeT110I	CYCGRG	3 cut(s)	912, 1032, 1092
BmgT120I	GGNCC	3 cut(s)	991, 1795, 1859
BmiI	GGNNCC	5 cut(s)	76, 532, 810, 993, 1110
BmrFI	CCNGG	5 cut(s)	806, 1033, 1034, 1358, 1858
BmrI	ACTGGG	2 cut(s)	1544, 2579
BmuI	ACTGGG	2 cut(s)	1544, 2579
BoxI	GACNNNNGTC	1 cut(s)	1590
BpmI	CTGGAG	2 cut(s)	1398, 1609
Bpu10I	CCTNAGC	1 cut(s)	486
BpuEI	CTTGAG	2 cut(s)	1974, 2232
BpuMI	CCSGG	3 cut(s)	1033, 1034, 1858
Bsa29I	ATCGAT	1 cut(s)	2492
BsaJI	CCNNGG	6 cut(s)	603, 948, 1032, 1269, 1332, 1356
BsaWI	WCCGGW	1 cut(s)	889
BsaXI	ACNNNNNCTCC	2 cut(s)	2427, 2457
Bsc4I	CCNNNNNNNGG	1 cut(s)	1856
Bse1I	ACTGG	3 cut(s)	1550, 1592, 2585
Bse3DI	GCAATG	6 cut(s)	216, 387, 469, 836, 1285, 1969
BseAI	TCCGGA	1 cut(s)	889
BseBI	CCWGG	2 cut(s)	806, 1358
BseCI	ATCGAT	1 cut(s)	2492
BseDI	CCNNGG	6 cut(s)	603, 948, 1032, 1269, 1332, 1356
BseGI	GGATG	8 cut(s)	534, 1182, 1385, 1650, 1663, 1714, 2062, 2410
BseLI	CCNNNNNNNGG	1 cut(s)	1856
BseMI	GCAATG	6 cut(s)	216, 387, 469, 836, 1285, 1969
BseNI	ACTGG	3 cut(s)	1550, 1592, 2585
BseRI	GAGGAG	4 cut(s)	377, 1121, 1181, 2565
BseSI	GKGCMC	1 cut(s)	79
BseYI	CCCAGC	2 cut(s)	1797, 2067
BsgI	GTGCAG	3 cut(s)	29, 288, 315
Bsh1236I	CGCG	1 cut(s)	1699
BshFI	GGCC	6 cut(s)	595, 804, 992, 1172, 1796, 1861
BshNI	GGYRCC	1 cut(s)	74
BshVI	ATCGAT	1 cut(s)	2492
BsiHKAI	GWGCWC	1 cut(s)	750
BsiHKCI	CYCGRG	3 cut(s)	912, 1032, 1092
BsiSI	CCGG	3 cut(s)	890, 1033, 1857
BslFI	GGGAC	2 cut(s)	895, 2566
BslI	CCNNNNNNNGG	1 cut(s)	1856
BsmAI	GTCTC	2 cut(s)	1578, 1911
BsmFI	GGGAC	2 cut(s)	895, 2566
BsmI	GAATGC	2 cut(s)	43, 478
BsnI	GGCC	6 cut(s)	595, 804, 992, 1172, 1796, 1861
BsoBI	CYCGRG	3 cut(s)	912, 1032, 1092
Bsp1286I	GDGCHC	3 cut(s)	79, 750, 1113
Bsp13I	TCCGGA	1 cut(s)	889
Bsp1407I	TGTACA	2 cut(s)	1873, 2344
Bsp143I	GATC	6 cut(s)	634, 808, 1285, 1465, 1502, 2521
Bsp19I	CCATGG	1 cut(s)	1269
BspACI	CCGC	5 cut(s)	83, 813, 1697, 1881, 2387
BspANI	GGCC	6 cut(s)	595, 804, 992, 1172, 1796, 1861
BspDI	ATCGAT	1 cut(s)	2492
BspEI	TCCGGA	1 cut(s)	889
BspFNI	CGCG	1 cut(s)	1699
BspHI	TCATGA	1 cut(s)	279
BspLI	GGNNCC	5 cut(s)	76, 532, 810, 993, 1110
BspMAI	CTGCAG	2 cut(s)	220, 2331
BspMI	ACCTGC	2 cut(s)	1576, 1700
BspPI	GGATC	3 cut(s)	803, 816, 2529
BspQI	GCTCTTC	1 cut(s)	93
BspT107I	GGYRCC	1 cut(s)	74
BsrDI	GCAATG	6 cut(s)	216, 387, 469, 836, 1285, 1969
BsrGI	TGTACA	2 cut(s)	1873, 2344
BsrI	ACTGG	3 cut(s)	1550, 1592, 2585
BssECI	CCNNGG	6 cut(s)	603, 948, 1032, 1269, 1332, 1356
BssMI	GATC	6 cut(s)	634, 808, 1285, 1465, 1502, 2521
BssSI	CACGAG	1 cut(s)	306
BssT1I	CCWWGG	3 cut(s)	603, 1269, 1332
Bst2BI	CACGAG	1 cut(s)	306
Bst2UI	CCWGG	2 cut(s)	806, 1358
Bst4CI	ACNGT	5 cut(s)	231, 949, 1329, 2097, 2557
Bst6I	CTCTTC	5 cut(s)	93, 246, 1041, 1131, 1900
BstAPI	GCANNNNNTGC	4 cut(s)	215, 302, 482, 2437
BstAUI	TGTACA	2 cut(s)	1873, 2344
BstC8I	GCNNGC	4 cut(s)	642, 1725, 1790, 1794
BstDSI	CCRYGG	2 cut(s)	948, 1269
BstEII	GGTNACC	1 cut(s)	1736
BstF5I	GGATG	8 cut(s)	534, 1182, 1385, 1650, 1663, 1714, 2062, 2410
BstFNI	CGCG	1 cut(s)	1699
BstKTI	GATC	6 cut(s)	637, 811, 1288, 1468, 1505, 2524
BstMAI	GTCTC	2 cut(s)	1578, 1911
BstMBI	GATC	6 cut(s)	634, 808, 1285, 1465, 1502, 2521
BstNI	CCWGG	2 cut(s)	806, 1358
BstNSI	RCATGY	2 cut(s)	569, 1679
BstPAI	GACNNNNGTC	1 cut(s)	1590
BstPI	GGTNACC	1 cut(s)	1736
BstSCI	CCNGG	5 cut(s)	804, 1031, 1032, 1356, 1856
BstSFI	CTRYAG	9 cut(s)	216, 863, 1008, 1053, 1206, 1245, 2297, 2327, 2462
BstSLI	GKGCMC	1 cut(s)	79
BstUI	CGCG	1 cut(s)	1699
BstX2I	RGATCY	1 cut(s)	808
BstYI	RGATCY	1 cut(s)	808
Bsu15I	ATCGAT	1 cut(s)	2492
BsuI	GTATCC	1 cut(s)	1039
BsuRI	GGCC	6 cut(s)	595, 804, 992, 1172, 1796, 1861
BsuTUI	ATCGAT	1 cut(s)	2492
BtgI	CCRYGG	2 cut(s)	948, 1269
BtgZI	GCGATG	1 cut(s)	1991
BtsCI	GGATG	8 cut(s)	534, 1182, 1385, 1650, 1663, 1714, 2062, 2410
BtsI	GCAGTG	1 cut(s)	343
BtsIMutI	CAGTG	3 cut(s)	343, 1325, 1557
BveI	ACCTGC	2 cut(s)	1576, 1700
Cac8I	GCNNGC	4 cut(s)	642, 1725, 1790, 1794
CaiI	CAGNNNCTG	1 cut(s)	302
CciI	TCATGA	1 cut(s)	279
Cfr13I	GGNCC	3 cut(s)	991, 1795, 1859
Cfr9I	CCCGGG	1 cut(s)	1032
ClaI	ATCGAT	1 cut(s)	2492
Csp6I	GTAC	8 cut(s)	68, 353, 569, 726, 1425, 1874, 2252, 2345
CspCI	CAANNNNNGTGG	2 cut(s)	1314, 1349
CviQI	GTAC	8 cut(s)	68, 353, 569, 726, 1425, 1874, 2252, 2345
DpnI	GATC	6 cut(s)	636, 810, 1287, 1467, 1504, 2523
DpnII	GATC	6 cut(s)	634, 808, 1285, 1465, 1502, 2521
EaeI	YGGCCR	1 cut(s)	802
Eam1104I	CTCTTC	5 cut(s)	93, 246, 1041, 1131, 1900
EarI	CTCTTC	5 cut(s)	93, 246, 1041, 1131, 1900
Ecl136II	GAGCTC	1 cut(s)	748
Eco130I	CCWWGG	3 cut(s)	603, 1269, 1332
Eco24I	GRGCYC	2 cut(s)	750, 1113
Eco53kI	GAGCTC	1 cut(s)	748
Eco57I	CTGAAG	5 cut(s)	1065, 1251, 1425, 1725, 2294
Eco88I	CYCGRG	3 cut(s)	912, 1032, 1092
Eco91I	GGTNACC	1 cut(s)	1736
EcoICRI	GAGCTC	1 cut(s)	748
EcoO109I	RGGNCCY	1 cut(s)	991
EcoO65I	GGTNACC	1 cut(s)	1736
EcoRI	GAATTC	1 cut(s)	1351
EcoRII	CCWGG	2 cut(s)	804, 1356
EcoT14I	CCWWGG	3 cut(s)	603, 1269, 1332
EcoT38I	GRGCYC	2 cut(s)	750, 1113
ErhI	CCWWGG	3 cut(s)	603, 1269, 1332
FaqI	GGGAC	2 cut(s)	895, 2566
FauI	CCCGC	2 cut(s)	820, 1704
FbaI	TGATCA	2 cut(s)	634, 1465
FblI	GTMKAC	1 cut(s)	617
FokI	GGATG	8 cut(s)	521, 1169, 1372, 1650, 1657, 1701, 2049, 2397
FriOI	GRGCYC	2 cut(s)	750, 1113
FspBI	CTAG	5 cut(s)	206, 359, 672, 717, 1445
GsaI	CCCAGC	2 cut(s)	1801, 2071
GsuI	CTGGAG	2 cut(s)	1398, 1609
HaeIII	GGCC	6 cut(s)	595, 804, 992, 1172, 1796, 1861
HapII	CCGG	3 cut(s)	890, 1033, 1857
HincII	GTYRAC	2 cut(s)	520, 558
HindII	GTYRAC	2 cut(s)	520, 558
HindIII	AAGCTT	2 cut(s)	499, 1407
HpaII	CCGG	3 cut(s)	890, 1033, 1857
HphI	GGTGA	2 cut(s)	34, 1730
Hpy166II	GTNNAC	3 cut(s)	520, 558, 618
Hpy8I	GTNNAC	3 cut(s)	520, 558, 618
Hpy99I	CGWCG	1 cut(s)	2371
HpyAV	CCTTC	4 cut(s)	591, 1226, 1767, 2051
HpyCH4III	ACNGT	5 cut(s)	231, 949, 1329, 2097, 2557
HpyCH4IV	ACGT	2 cut(s)	160, 2130
HpySE526I	ACGT	2 cut(s)	160, 2130
Kpn2I	TCCGGA	1 cut(s)	889
Ksp22I	TGATCA	2 cut(s)	634, 1465
Kzo9I	GATC	6 cut(s)	634, 808, 1285, 1465, 1502, 2521
LguI	GCTCTTC	1 cut(s)	93
LmnI	GCTCC	4 cut(s)	52, 753, 1108, 1936
MaeI	CTAG	5 cut(s)	206, 359, 672, 717, 1445
MaeII	ACGT	2 cut(s)	160, 2130
MaeIII	GTNAC	4 cut(s)	427, 1295, 1650, 1736
MalI	GATC	6 cut(s)	636, 810, 1287, 1467, 1504, 2523
MboI	GATC	6 cut(s)	634, 808, 1285, 1465, 1502, 2521
MfeI	CAATTG	2 cut(s)	335, 2390
MflI	RGATCY	1 cut(s)	808
MhlI	GDGCHC	3 cut(s)	79, 750, 1113
MlsI	TGGCCA	1 cut(s)	804
MluNI	TGGCCA	1 cut(s)	804
MlyI	GAGTC	8 cut(s)	116, 413, 553, 697, 728, 1348, 1466, 1600
MmeI	TCCRAC	3 cut(s)	1945, 2185, 2470
Mox20I	TGGCCA	1 cut(s)	804
MroI	TCCGGA	1 cut(s)	889
MroXI	GAANNNNTTC	1 cut(s)	1240
MscI	TGGCCA	1 cut(s)	804
MseI	TTAA	6 cut(s)	48, 126, 140, 624, 1599, 1751
MslI	CAYNNNNRTG	2 cut(s)	408, 410
Msp20I	TGGCCA	1 cut(s)	804
MspA1I	CMGCKG	2 cut(s)	880, 1517
MspI	CCGG	3 cut(s)	890, 1033, 1857
MspR9I	CCNGG	5 cut(s)	806, 1033, 1034, 1358, 1858
MunI	CAATTG	2 cut(s)	335, 2390
Mva1269I	GAATGC	2 cut(s)	43, 478
MvaI	CCWGG	2 cut(s)	806, 1358
MvnI	CGCG	1 cut(s)	1699
NciI	CCSGG	3 cut(s)	1033, 1034, 1858
NcoI	CCATGG	1 cut(s)	1269
NdeII	GATC	6 cut(s)	634, 808, 1285, 1465, 1502, 2521
NlaIV	GGNNCC	5 cut(s)	76, 532, 810, 993, 1110
NmeAIII	GCCGAG	1 cut(s)	541
NmuCI	GTSAC	2 cut(s)	1295, 1736
NspI	RCATGY	2 cut(s)	569, 1679
PaeR7I	CTCGAG	1 cut(s)	1092
PagI	TCATGA	1 cut(s)	279
PaqCI	CACCTGC	1 cut(s)	1576
PciSI	GCTCTTC	1 cut(s)	93
PcsI	WCGNNNNNNNCGW	1 cut(s)	568
PctI	GAATGC	2 cut(s)	43, 478
PdmI	GAANNNNTTC	1 cut(s)	1240
PleI	GAGTC	8 cut(s)	115, 413, 553, 697, 728, 1347, 1466, 1599
PpsI	GAGTC	8 cut(s)	115, 413, 553, 697, 728, 1347, 1466, 1599
PshAI	GACNNNNGTC	1 cut(s)	1590
PshBI	ATTAAT	1 cut(s)	1599
Psp124BI	GAGCTC	1 cut(s)	750
Psp1406I	AACGTT	1 cut(s)	160
Psp6I	CCWGG	2 cut(s)	804, 1356
PspEI	GGTNACC	1 cut(s)	1736
PspFI	CCCAGC	2 cut(s)	1797, 2067
PspGI	CCWGG	2 cut(s)	804, 1356
PspN4I	GGNNCC	5 cut(s)	76, 532, 810, 993, 1110
PspPI	GGNCC	3 cut(s)	991, 1795, 1859
PstI	CTGCAG	2 cut(s)	220, 2331
PstNI	CAGNNNCTG	1 cut(s)	302
PsuI	RGATCY	1 cut(s)	808
PvuII	CAGCTG	2 cut(s)	880, 1517
RsaI	GTAC	8 cut(s)	69, 354, 570, 727, 1426, 1875, 2253, 2346
RsaNI	GTAC	8 cut(s)	68, 353, 569, 726, 1425, 1874, 2252, 2345
RseI	CAYNNNNRTG	2 cut(s)	408, 410
SacI	GAGCTC	1 cut(s)	750
SapI	GCTCTTC	1 cut(s)	93
SaqAI	TTAA	6 cut(s)	48, 126, 140, 624, 1599, 1751
Sau3AI	GATC	6 cut(s)	634, 808, 1285, 1465, 1502, 2521
Sau96I	GGNCC	3 cut(s)	991, 1795, 1859
ScaI	AGTACT	2 cut(s)	354, 2253
SchI	GAGTC	8 cut(s)	116, 413, 553, 697, 728, 1348, 1466, 1600
ScrFI	CCNGG	5 cut(s)	806, 1033, 1034, 1358, 1858
SduI	GDGCHC	3 cut(s)	79, 750, 1113
SfcI	CTRYAG	9 cut(s)	216, 863, 1008, 1053, 1206, 1245, 2297, 2327, 2462
Sfr274I	CTCGAG	1 cut(s)	1092
SlaI	CTCGAG	1 cut(s)	1092
SmaI	CCCGGG	1 cut(s)	1034
SmiMI	CAYNNNNRTG	2 cut(s)	408, 410
SmlI	CTYRAG	3 cut(s)	1092, 1989, 2247
SmoI	CTYRAG	3 cut(s)	1092, 1989, 2247
SsiI	CCGC	5 cut(s)	83, 813, 1697, 1881, 2387
SspI	AATATT	2 cut(s)	2015, 2126
SspMI	CTAG	5 cut(s)	206, 359, 672, 717, 1445
SstI	GAGCTC	1 cut(s)	750
StyD4I	CCNGG	5 cut(s)	804, 1031, 1032, 1356, 1856
StyI	CCWWGG	3 cut(s)	603, 1269, 1332
TaaI	ACNGT	5 cut(s)	231, 949, 1329, 2097, 2557
TaiI	ACGT	2 cut(s)	163, 2133
TaqI	TCGA	4 cut(s)	391, 1093, 1288, 2492
TatI	WGTACW	7 cut(s)	67, 352, 725, 1424, 1873, 2251, 2344
TauI	GCSGC	2 cut(s)	86, 1883
Tru1I	TTAA	6 cut(s)	48, 126, 140, 624, 1599, 1751
Tru9I	TTAA	6 cut(s)	48, 126, 140, 624, 1599, 1751
TscAI	CASTG	3 cut(s)	350, 1332, 1557
TseFI	GTSAC	2 cut(s)	1295, 1736
Tsp45I	GTSAC	2 cut(s)	1295, 1736
TspDTI	ATGAA	9 cut(s)	17, 248, 268, 401, 555, 777, 1539, 1887, 2534
TspGWI	ACGGA	2 cut(s)	2355, 2557
TspMI	CCCGGG	1 cut(s)	1032
TspRI	CASTG	3 cut(s)	350, 1332, 1557
VspI	ATTAAT	1 cut(s)	1599
XapI	RAATTY	6 cut(s)	169, 664, 1351, 1369, 1773, 2533
XbaI	TCTAGA	2 cut(s)	358, 716
XceI	RCATGY	2 cut(s)	569, 1679
XhoI	CTCGAG	1 cut(s)	1092
XmaI	CCCGGG	1 cut(s)	1032
XmiI	GTMKAC	1 cut(s)	617
XmnI	GAANNNNTTC	1 cut(s)	1240
XspI	CTAG	5 cut(s)	206, 359, 672, 717, 1445
ZrmI	AGTACT	2 cut(s)	354, 2253

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.