AT5G48910

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0013442
Physical Location & Seq
Reverse (-)
19832785 .. 19835148
2364 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G48910.1

Sequence Viewer

Length: 1941 bp
ATGAACCCAACACAGACACTTTTCTCTCCCGGCGGTAACTCGCCGGCGTCTTCTCCGGCGAGTCATCCATCTTCACTCTTTCCTCAAATCAACAACTGTCGAACTATAAGAGACCTCTCTCAAATCCATGCCGTTTTCATTAAATCTGGTCAAATGCGAGACACTCTCGCCGCCGCAGAGATTCTCCGATTCTGTGCTACCTCCGATCTCCACCACCGTGACCTTGACTACGCACATAAGATCTTTAATCAAATGCCTCAACGAAATTGCTTCTCTTGGAATACTATAATCAGAGGTTTCAGTGAGAGTGACGAAGACAAAGCTCTGATCGCAATCACATTATTCTACGAGATGATGAGTGATGAGTTTGTTGAACCGAATCGGTTTACGTTTCCCTCTGTTCTTAAGGCTTGTGCGAAAACTGGGAAGATTCAAGAAGGTAAGCAGATTCATGGTTTGGCTTTGAAGTATGGATTTGGTGGTGATGAATTTGTGATGAGTAATCTTGTTAGAATGTATGTGATGTGTGGTTTTATGAAAGATGCTCGTGTGTTGTTTTATAAGAACATTATAGAGAAAGATATGGTGGTGATGACTGATAGAAGAAAGAGAGATGGTGAAATAGTTTTGTGGAATGTTATGATTGATGGTTATATGAGACTTGGTGATTGTAAAGCTGCACGGATGTTGTTTGATAAAATGCGTCAAAGAAGCGTTGTTTCGTGGAATACGATGATATCGGGTTATTCGCTGAACGGGTTTTTCAAAGATGCTGTTGAGGTTTTTCGTGAGATGAAGAAAGGGGATATTAGACCGAATTATGTTACTTTGGTTAGTGTTCTTCCTGCTATTTCACGGCTTGGGTCTTTAGAGTTGGGAGAATGGTTGCATTTGTATGCAGAGGATAGTGGAATTAGGATTGATGATGTGCTTGGCTCTGCTTTGATTGATATGTATTCGAAATGTGGGATCATTGAGAAAGCGATTCATGTATTTGAGAGGTTACCTAGAGAGAACGTGATTACTTGGAGTGCGATGATTAACGGGTTTGCTATACATGGCCAGGCAGGTGATGCTATTGACTGTTTTTGTAAAATGAGGCAGGCTGGAGTTCGACCTAGTGATGTTGCCTACATTAATCTTTTGACTGCTTGTAGCCATGGCGGGTTGGTAGAAGAAGGAAGGAGATATTTCAGTCAGATGGTGAGTGTGGATGGTTTAGAGCCTAGGATTGAACACTACGGGTGTATGGTTGATTTATTGGGTCGTTCGGGTCTTCTTGATGAGGCTGAGGAGTTTATACTTAATATGCCTATAAAACCAGATGATGTGATATGGAAAGCACTTTTGGGTGCTTGCAGAATGCAGGGAAATGTCGAGATGGGCAAGCGCGTTGCCAATATTCTGATGGATATGGTTCCTCATGACAGTGGAGCTTATGTCGCCCTCTCAAACATGTATGCTTCTCAAGGAAACTGGTCAGAGGTTTCAGAGATGAGGCTGAGAATGAAGGAGAAGGATATAAGAAAAGACCCTGGGTGTAGTTTGATCGACATTGATGGCGTGCTTCATGAGTTTGTTGTGGAAGATGATTCACACCCAAAAGCCAAAGAAATCAACTCAATGCTCGTAGAAATCTCAGACAAACTGAGACTAGCTGGGTATAGACCAATCACCACACAGGTTTTGTTAAACTTGGAGGAAGAAGATAAAGAAAATGTACTTCATTACCACAGCGAGAAGATCGCTACAGCGTTTGGGTTGATAAGCACGAGCCCTGGCAAACCAATACGCATTGTTAAGAACCTACGTATCTGTGAGGATTGTCATTCGTCCATCAAACTCATCTCCAAAGTTTACAAGAGAAAAATAACGGTACGAGACCGGAAACGTTTTCACCATTTCCAAGATGGCTCATGCTCGTGTATGGATTATTGGTGA

Protein Analysis

646

Amino Acids

73.26

Weight (kDa)

6.69

Isoelectric Point (pI)

45.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 208 - 239 3.6e-06 PPR repeat family
PPR PF01535 209 - 238 5.4e-07 PPR repeat
PPR_2 PF13041 238 - 280 2.2e-10 PPR repeat family
PPR_1 PF12854 238 - 266 8.2e-07 PPR repeat
PPR PF01535 240 - 267 3.1e-09 PPR repeat
PPR_2 PF13041 339 - 386 2.6e-09 PPR repeat family
PPR PF01535 341 - 371 4.6e-06 PPR repeat
E_motif PF20431 458 - 517 9.6e-18 E motif
DYW_deaminase PF14432 554 - 646 1.7e-38 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013442)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48910
fragaria_vesca FvH4_2g19560 FvH4_2g19570
malus_domestica MD05G1179700.v1.1 MD10G1169300.v1.1
prunus_persica Prupe.6G095600_v2.0.a1 Prupe.8G207000_v2.0.a1
pyrus_communis pycom05g16620 pycom10g14610
rosa_chinensis RchiOBHm_Chr6g0285331
rosa_laevigata RLG00000012653
rosa_multiflora Rmu_sc0011958.1_g000003
rosa_roxburghii Rroxscaffold_7G00183350
rosa_rugosa Rorug06G0173600
rosa_samantha Rh6AG284300 Rh6BG285100 Rh6DG279600
rosa_wichuraiana Rw6G024470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 561
AarI CACCTGC 1 cut(s) 1058
Acc36I ACCTGC 1 cut(s) 1058
AccII CGCG 1 cut(s) 1392
AciI CCGC 4 cut(s) 33, 171, 174, 1164
AclI AACGTT 1 cut(s) 1891
AclWI GGATC 1 cut(s) 977
AcoI YGGCCR 1 cut(s) 1060
AcsI RAATTY 1 cut(s) 488
AcyI GRCGYC 1 cut(s) 47
AfaI GTAC 2 cut(s) 1722, 1878
AflII CTTAAG 1 cut(s) 404
AflIII ACRYGT 1 cut(s) 1455
AgsI TTSAA 5 cut(s) 374, 434, 466, 766, 1235
AjnI CCWGG 3 cut(s) 1062, 1534, 1777
AjuI GAANNNNNNNTTGG 2 cut(s) 1331, 1363
AleI CACNNNNGTG 1 cut(s) 216
AluBI AGCT 4 cut(s) 323, 677, 1436, 1658
AluI AGCT 4 cut(s) 323, 677, 1436, 1658
Alw26I GTCTC 5 cut(s) 105, 153, 652, 1645, 1875
AlwI GGATC 1 cut(s) 977
AoxI GGCC 1 cut(s) 1060
ApeKI GCWGC 1 cut(s) 677
ApoI RAATTY 1 cut(s) 488
AseI ATTAAT 1 cut(s) 1137
AspA2I CCTAGG 1 cut(s) 1226
AspLEI GCGC 1 cut(s) 1392
AsuC2I CCSGG 1 cut(s) 30
AsuHPI GGTGA 8 cut(s) 494, 601, 629, 677, 1082, 1216, 1666, 1889
AsuII TTCGAA 1 cut(s) 959
AvrII CCTAGG 1 cut(s) 1226
BaeI ACNNNNGTAYC 2 cut(s) 1795, 1828
BalI TGGCCA 1 cut(s) 1062
BanII GRGCYC 1 cut(s) 1778
BauI CACGAG 3 cut(s) 546, 1771, 1921
BbsI GAAGAC 3 cut(s) 42, 321, 1268
BbvCI CCTCAGC 1 cut(s) 1290
BbvI GCAGC 1 cut(s) 664
BceAI ACGGC 2 cut(s) 116, 872
BciT130I CCWGG 3 cut(s) 1064, 1536, 1779
BcnI CCSGG 1 cut(s) 30
BcoDI GTCTC 5 cut(s) 105, 153, 652, 1645, 1875
BfaI CTAG 4 cut(s) 1008, 1119, 1227, 1655
BfmI CTRYAG 1 cut(s) 1749
BfrI CTTAAG 1 cut(s) 404
BfuAI ACCTGC 1 cut(s) 1058
BglII AGATCT 1 cut(s) 240
BisI GCNGC 3 cut(s) 171, 174, 678
BlnI CCTAGG 1 cut(s) 1226
BlsI GCNGC 3 cut(s) 172, 175, 679
Bme1390I CCNGG 4 cut(s) 30, 1064, 1536, 1779
BmiI GGNNCC 1 cut(s) 1419
BmrFI CCNGG 4 cut(s) 30, 1064, 1536, 1779
BmrI ACTGGG 1 cut(s) 432
BmsI GCATC 3 cut(s) 532, 760, 1063
BmuI ACTGGG 1 cut(s) 432
BpiI GAAGAC 3 cut(s) 42, 321, 1268
BplI GAGNNNNNCTC 2 cut(s) 150, 182
BpmI CTGGAG 1 cut(s) 1128
Bpu10I CCTNAGC 1 cut(s) 1290
Bpu14I TTCGAA 1 cut(s) 959
BpuEI CTTGAG 1 cut(s) 1452
BpuMI CCSGG 1 cut(s) 30
BsaAI YACGTR 1 cut(s) 1811
BsaBI GATNNNNATC 1 cut(s) 332
BsaHI GRCGYC 1 cut(s) 47
BsaI GGTCTC 2 cut(s) 105, 1875
BsaJI CCNNGG 5 cut(s) 1159, 1226, 1534, 1535, 1777
BsaWI WCCGGW 1 cut(s) 1884
BsaXI ACNNNNNCTCC 2 cut(s) 1425, 1455
Bse118I RCCGGY 1 cut(s) 43
Bse1I ACTGG 2 cut(s) 427, 1481
Bse8I GATNNNNATC 1 cut(s) 332
BseBI CCWGG 3 cut(s) 1064, 1536, 1779
BseDI CCNNGG 5 cut(s) 1159, 1226, 1534, 1535, 1777
BseGI GGATG 3 cut(s) 64, 690, 1219
BseJI GATNNNNATC 1 cut(s) 332
BseMII CTCAG 4 cut(s) 1281, 1493, 1640, 1653
BseNI ACTGG 2 cut(s) 427, 1481
BseRI GAGGAG 1 cut(s) 1307
BseXI GCAGC 1 cut(s) 664
BseYI CCCAGC 1 cut(s) 1658
BsgI GTGCAG 1 cut(s) 663
Bsh1236I CGCG 1 cut(s) 1392
BshFI GGCC 1 cut(s) 1062
BsiSI CCGG 4 cut(s) 30, 44, 56, 1885
BsmAI GTCTC 5 cut(s) 105, 153, 652, 1645, 1875
BsmI GAATGC 1 cut(s) 1368
BsnI GGCC 1 cut(s) 1062
Bso31I GGTCTC 2 cut(s) 105, 1875
Bsp119I TTCGAA 1 cut(s) 959
Bsp1286I GDGCHC 1 cut(s) 1778
Bsp143I GATC 6 cut(s) 205, 240, 327, 969, 1548, 1743
Bsp19I CCATGG 1 cut(s) 1159
BspACI CCGC 4 cut(s) 33, 171, 174, 1164
BspANI GGCC 1 cut(s) 1062
BspCNI CTCAG 4 cut(s) 1282, 1494, 1641, 1652
BspFNI CGCG 1 cut(s) 1392
BspHI TCATGA 2 cut(s) 1423, 1570
BspLI GGNNCC 1 cut(s) 1419
BspMI ACCTGC 1 cut(s) 1058
BspPI GGATC 1 cut(s) 977
BspT104I TTCGAA 1 cut(s) 959
BspTI CTTAAG 1 cut(s) 404
BspTNI GGTCTC 2 cut(s) 105, 1875
BsrFI RCCGGY 1 cut(s) 43
BsrI ACTGG 2 cut(s) 427, 1481
BssAI RCCGGY 1 cut(s) 43
BssECI CCNNGG 5 cut(s) 1159, 1226, 1534, 1535, 1777
BssMI GATC 6 cut(s) 205, 240, 327, 969, 1548, 1743
BssNI GRCGYC 1 cut(s) 47
BssSI CACGAG 3 cut(s) 546, 1771, 1921
BssT1I CCWWGG 2 cut(s) 1159, 1226
Bst2BI CACGAG 3 cut(s) 546, 1771, 1921
Bst2UI CCWGG 3 cut(s) 1064, 1536, 1779
Bst4CI ACNGT 5 cut(s) 98, 218, 1085, 1430, 1876
BstACI GRCGYC 1 cut(s) 47
BstAFI CTTAAG 1 cut(s) 404
BstAPI GCANNNNNTGC 1 cut(s) 1073
BstBAI YACGTR 1 cut(s) 1811
BstBI TTCGAA 1 cut(s) 959
BstC8I GCNNGC 5 cut(s) 45, 1104, 1357, 1388, 1565
BstDEI CTNAG 4 cut(s) 1290, 1502, 1639, 1649
BstDSI CCRYGG 1 cut(s) 1159
BstEII GGTNACC 1 cut(s) 1002
BstF5I GGATG 3 cut(s) 64, 690, 1219
BstFNI CGCG 1 cut(s) 1392
BstHHI GCGC 1 cut(s) 1392
BstKTI GATC 6 cut(s) 208, 243, 330, 972, 1551, 1746
BstMAI GTCTC 5 cut(s) 105, 153, 652, 1645, 1875
BstMBI GATC 6 cut(s) 205, 240, 327, 969, 1548, 1743
BstMWI GCNNNNNNNGC 3 cut(s) 329, 1073, 1442
BstNI CCWGG 3 cut(s) 1064, 1536, 1779
BstNSI RCATGY 1 cut(s) 1459
BstPI GGTNACC 1 cut(s) 1002
BstSCI CCNGG 4 cut(s) 28, 1062, 1534, 1777
BstSFI CTRYAG 1 cut(s) 1749
BstSNI TACGTA 1 cut(s) 1811
BstUI CGCG 1 cut(s) 1392
BstV1I GCAGC 1 cut(s) 664
BstV2I GAAGAC 3 cut(s) 42, 321, 1268
BstX2I RGATCY 1 cut(s) 240
BstYI RGATCY 1 cut(s) 240
BsuRI GGCC 1 cut(s) 1062
BtgI CCRYGG 1 cut(s) 1159
BtgZI GCGATG 1 cut(s) 1049
BtsCI GGATG 3 cut(s) 64, 690, 1219
BtsIMutI CAGTG 2 cut(s) 307, 1435
BveI ACCTGC 1 cut(s) 1058
Cac8I GCNNGC 5 cut(s) 45, 1104, 1357, 1388, 1565
CciI TCATGA 2 cut(s) 1423, 1570
CfoI GCGC 1 cut(s) 1392
Cfr10I RCCGGY 1 cut(s) 43
CseI GACGC 2 cut(s) 36, 692
Csp6I GTAC 2 cut(s) 1721, 1877
CviAII CATG 9 cut(s) 128, 452, 989, 1058, 1160, 1424, 1456, 1571, 1917
CviQI GTAC 2 cut(s) 1721, 1877
DdeI CTNAG 4 cut(s) 1290, 1502, 1639, 1649
DpnI GATC 6 cut(s) 207, 242, 329, 971, 1550, 1745
DpnII GATC 6 cut(s) 205, 240, 327, 969, 1548, 1743
EaeI YGGCCR 1 cut(s) 1060
Eco105I TACGTA 1 cut(s) 1811
Eco130I CCWWGG 2 cut(s) 1159, 1226
Eco24I GRGCYC 1 cut(s) 1778
Eco31I GGTCTC 2 cut(s) 105, 1875
Eco32I GATATC 1 cut(s) 738
Eco91I GGTNACC 1 cut(s) 1002
EcoO65I GGTNACC 1 cut(s) 1002
EcoRII CCWGG 3 cut(s) 1062, 1534, 1777
EcoRV GATATC 1 cut(s) 738
EcoT14I CCWWGG 2 cut(s) 1159, 1226
EcoT38I GRGCYC 1 cut(s) 1778
ErhI CCWWGG 2 cut(s) 1159, 1226
FaeI CATG 9 cut(s) 131, 455, 992, 1061, 1163, 1427, 1459, 1574, 1920
FatI CATG 9 cut(s) 127, 451, 988, 1057, 1159, 1423, 1455, 1570, 1916
FauI CCCGC 1 cut(s) 1157
Fnu4HI GCNGC 3 cut(s) 171, 174, 678
FokI GGATG 3 cut(s) 51, 697, 1226
FriOI GRGCYC 1 cut(s) 1778
Fsp4HI GCNGC 3 cut(s) 171, 174, 678
FspBI CTAG 4 cut(s) 1008, 1119, 1227, 1655
GlaI GCGC 1 cut(s) 1391
GluI GCNGC 3 cut(s) 171, 174, 678
GsaI CCCAGC 1 cut(s) 1662
GsuI CTGGAG 1 cut(s) 1128
HaeIII GGCC 1 cut(s) 1062
HapII CCGG 4 cut(s) 30, 44, 56, 1885
HgaI GACGC 2 cut(s) 36, 692
HhaI GCGC 1 cut(s) 1392
Hin1I GRCGYC 1 cut(s) 47
Hin1II CATG 9 cut(s) 131, 455, 992, 1061, 1163, 1427, 1459, 1574, 1920
Hin6I GCGC 1 cut(s) 1390
HinP1I GCGC 1 cut(s) 1390
HinfI GANTC 8 cut(s) 61, 181, 189, 379, 430, 448, 985, 1592
HpaII CCGG 4 cut(s) 30, 44, 56, 1885
HphI GGTGA 8 cut(s) 494, 601, 629, 677, 1082, 1216, 1666, 1889
Hpy166II GTNNAC 2 cut(s) 387, 1858
Hpy188I TCNGA 9 cut(s) 188, 205, 293, 327, 1200, 1407, 1483, 1492, 1642
Hpy188III TCNNGA 6 cut(s) 434, 788, 1280, 1378, 1424, 1571
Hpy8I GTNNAC 2 cut(s) 387, 1858
HpyAV CCTTC 5 cut(s) 431, 1172, 1176, 1504, 1510
HpyCH4III ACNGT 5 cut(s) 98, 218, 1085, 1430, 1876
HpyCH4IV ACGT 4 cut(s) 389, 1017, 1810, 1891
HpyCH4V TGCA 5 cut(s) 680, 889, 899, 1359, 1366
HpyF10VI GCNNNNNNNGC 3 cut(s) 329, 1073, 1442
HpyF3I CTNAG 4 cut(s) 1290, 1502, 1639, 1649
HpySE526I ACGT 4 cut(s) 389, 1017, 1810, 1891
Hsp92I GRCGYC 1 cut(s) 47
Hsp92II CATG 9 cut(s) 131, 455, 992, 1061, 1163, 1427, 1459, 1574, 1920
HspAI GCGC 1 cut(s) 1390
KroI GCCGGC 1 cut(s) 43
KroNI GCCGGC 1 cut(s) 45
Kzo9I GATC 6 cut(s) 205, 240, 327, 969, 1548, 1743
LmnI GCTCC 1 cut(s) 1433
Lsp1109I GCAGC 1 cut(s) 664
LweI GCATC 3 cut(s) 532, 760, 1063
MaeI CTAG 4 cut(s) 1008, 1119, 1227, 1655
MaeII ACGT 4 cut(s) 389, 1017, 1810, 1891
MaeIII GTNAC 5 cut(s) 35, 218, 308, 823, 1002
MalI GATC 6 cut(s) 207, 242, 329, 971, 1550, 1745
MboI GATC 6 cut(s) 205, 240, 327, 969, 1548, 1743
MflI RGATCY 1 cut(s) 240
MhlI GDGCHC 1 cut(s) 1778
MlsI TGGCCA 1 cut(s) 1062
MluCI AATT 4 cut(s) 265, 488, 817, 912
MluNI TGGCCA 1 cut(s) 1062
MlyI GAGTC 1 cut(s) 70
Mox20I TGGCCA 1 cut(s) 1062
MreI CGCCGGCG 1 cut(s) 43
MroNI GCCGGC 1 cut(s) 43
MscI TGGCCA 1 cut(s) 1062
MseI TTAA 8 cut(s) 141, 246, 405, 1041, 1137, 1305, 1691, 1800
MslI CAYNNNNRTG 4 cut(s) 216, 894, 1428, 1921
Msp20I TGGCCA 1 cut(s) 1062
MspCI CTTAAG 1 cut(s) 404
MspI CCGG 4 cut(s) 30, 44, 56, 1885
MspR9I CCNGG 4 cut(s) 30, 1064, 1536, 1779
Mva1269I GAATGC 1 cut(s) 1368
MvaI CCWGG 3 cut(s) 1064, 1536, 1779
MvnI CGCG 1 cut(s) 1392
MwoI GCNNNNNNNGC 3 cut(s) 329, 1073, 1442
NaeI GCCGGC 1 cut(s) 45
NciI CCSGG 1 cut(s) 30
NcoI CCATGG 1 cut(s) 1159
NdeII GATC 6 cut(s) 205, 240, 327, 969, 1548, 1743
NgoMIV GCCGGC 1 cut(s) 43
NlaIII CATG 9 cut(s) 131, 455, 992, 1061, 1163, 1427, 1459, 1574, 1920
NlaIV GGNNCC 1 cut(s) 1419
NmuCI GTSAC 2 cut(s) 218, 308
NspI RCATGY 1 cut(s) 1459
NspV TTCGAA 1 cut(s) 959
OliI CACNNNNGTG 1 cut(s) 216
PagI TCATGA 2 cut(s) 1423, 1570
PaqCI CACCTGC 1 cut(s) 1058
PasI CCCWGGG 1 cut(s) 1535
PciI ACATGT 1 cut(s) 1455
PcsI WCGNNNNNNNCGW 1 cut(s) 728
PctI GAATGC 1 cut(s) 1368
PdiI GCCGGC 1 cut(s) 45
PfeI GAWTC 7 cut(s) 181, 189, 379, 430, 448, 985, 1592
PkrI GCNGC 3 cut(s) 172, 175, 679
PleI GAGTC 1 cut(s) 69
PpsI GAGTC 1 cut(s) 69
Ppu21I YACGTR 1 cut(s) 1811
PscI ACATGT 1 cut(s) 1455
PshBI ATTAAT 1 cut(s) 1137
PsiI TTATAA 1 cut(s) 561
Psp1406I AACGTT 1 cut(s) 1891
Psp6I CCWGG 3 cut(s) 1062, 1534, 1777
PspEI GGTNACC 1 cut(s) 1002
PspFI CCCAGC 1 cut(s) 1658
PspGI CCWGG 3 cut(s) 1062, 1534, 1777
PspN4I GGNNCC 1 cut(s) 1419
PsuI RGATCY 1 cut(s) 240
RsaI GTAC 2 cut(s) 1722, 1878
RsaNI GTAC 2 cut(s) 1721, 1877
RseI CAYNNNNRTG 4 cut(s) 216, 894, 1428, 1921
SaqAI TTAA 8 cut(s) 141, 246, 405, 1041, 1137, 1305, 1691, 1800
SatI GCNGC 3 cut(s) 171, 174, 678
Sau3AI GATC 6 cut(s) 205, 240, 327, 969, 1548, 1743
SchI GAGTC 1 cut(s) 70
ScrFI CCNGG 4 cut(s) 30, 1064, 1536, 1779
SduI GDGCHC 1 cut(s) 1778
SfaNI GCATC 3 cut(s) 532, 760, 1063
SfcI CTRYAG 1 cut(s) 1749
SfuI TTCGAA 1 cut(s) 959
SgrAI CRCCGGYG 1 cut(s) 43
SmiMI CAYNNNNRTG 4 cut(s) 216, 894, 1428, 1921
SmlI CTYRAG 2 cut(s) 404, 1467
SmoI CTYRAG 2 cut(s) 404, 1467
SnaBI TACGTA 1 cut(s) 1811
Sse9I AATT 4 cut(s) 265, 488, 817, 912
SsiI CCGC 4 cut(s) 33, 171, 174, 1164
SspI AATATT 1 cut(s) 1402
SspMI CTAG 4 cut(s) 1008, 1119, 1227, 1655
StyD4I CCNGG 4 cut(s) 28, 1062, 1534, 1777
StyI CCWWGG 2 cut(s) 1159, 1226
TaaI ACNGT 5 cut(s) 98, 218, 1085, 1430, 1876
TaiI ACGT 4 cut(s) 392, 1020, 1813, 1894
TaqI TCGA 5 cut(s) 100, 959, 1114, 1377, 1551
TaqII GACCGA 1 cut(s) 829
TasI AATT 4 cut(s) 265, 488, 817, 912
TatI WGTACW 1 cut(s) 1720
TauI GCSGC 2 cut(s) 173, 176
TfiI GAWTC 7 cut(s) 181, 189, 379, 430, 448, 985, 1592
Tru1I TTAA 8 cut(s) 141, 246, 405, 1041, 1137, 1305, 1691, 1800
Tru9I TTAA 8 cut(s) 141, 246, 405, 1041, 1137, 1305, 1691, 1800
TscAI CASTG 2 cut(s) 307, 1435
TseFI GTSAC 2 cut(s) 218, 308
TseI GCWGC 1 cut(s) 677
Tsp45I GTSAC 2 cut(s) 218, 308
TspGWI ACGGA 1 cut(s) 697
TspRI CASTG 2 cut(s) 307, 1435
Vha464I CTTAAG 1 cut(s) 404
VspI ATTAAT 1 cut(s) 1137
XapI RAATTY 1 cut(s) 488
XceI RCATGY 1 cut(s) 1459
XcmI CCANNNNNNNNNTGG 2 cut(s) 1405, 1907
XmaJI CCTAGG 1 cut(s) 1226
XspI CTAG 4 cut(s) 1008, 1119, 1227, 1655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.