Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0013442

Physical Location & Seq

Genomic Coordinates Reverse (-)

19913845 .. 19915536

Gene Structure 1692 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g16620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGACCTCCACCGTCTGCAACCCCACAACTCCACCGTCCTCTCACCCATCTTTTCTCTTCCCACAAATCACATCATGCAAAACCATCAGAGACCTGCACCAAGTCCACGCCCACTTTATCAAAACCCGTCAAATCCACGACCCCCTCGCCGCCGCAGAAATCCTCCGCTTCTACGCCCTCTCGACCCACCGCAGTATCCAATGCGCCCGTTCCGTTTTCACCCAGATGGAGAAACCCAATAACTTTTCCTGGAACACAATCATCAGAGCTCTCGCAGAGAGCTCTGTTAACGACCACTCGCTCGATGCCCTCTTCTTCTTTTCTCAAATGGTTGCTGATGGTTCTGTGGGACCCAATAAGTTCACCTTCCCTTCAGTGCTGAAAGCCTGTGCAAAAATGGGGAATCTTGAGGTGGGTAAGTGTGTTCATGGCATGGCTGTGAAGTTTGGATTGGAATGTGATGGGTTTGTTGTGAGCAATCTGGTGAGGATGTATGTAATGTGTGAGGTTATGGAGGATGCAAATTTGTTGTTTTCTAGGAGTGTTGGGGATTTTGGTGTTTTGAATGGAAGGAAGCAAGAGGGCAATGTGGTTTTGTGGAATGTGATTGTTGATGGGTACGTTAGAGTTGGGGATTTTAGAGCTGCAAGGGAGCTGTTCGATAAAATGCCTCACAGAAGCGTGGTGTCCTGGAATGCGATGATATCCGGGTACGCGCAAAACGGGTTTTTAAAGGAGGCTGTGGAAATGTTCCGGGATATGCAGATTGGGAATGTGTGTCCAAATTATGTGACTTTGGTTAGTGTCTTGCCGGCGATATCACGGCTTGGTGCACTTGAACTAGGGAAGTGGATACATTTGTATGCCAACAAGAATGGAATCGGGATTGATGATGTGCTTGGTTCTGCTTTGGTGGATATGTACTGTAAGTGTGGGAGCATTGAGAAGGCACTTCTAGTTTTTGAGCAACTGCCTAAAAGGAATGTGATAACTTGGAATGCCATAATTAGCGGACTTGCTATGCACGGTCGTGTTGAGGATGCACTAGATTATTTTTCGAAGATGGAACAAGCTGGTGTGCTGCCTAGTGATGTAACATACATTGGTATCTTGAGTGCTTGTAGCCATGCCGGTTTGGTGGAGAAGGGGAGATCATTCTTCAACCATATGGTTAATGTAGTCGGCTTAGAACCTAGAATCGAGCATTATGGATGTATGGTTGATTTATTAGGTCGTGCAGGATTGTTAGAAGAAGCTGAAGAGCTTATACTGAACATGCCAATTCAGCCAGATGATGTTACATGGAAGGCGCTACTCGGTGCTTGCAAGATGCAAGGGAACATCGATATGGGTAAACGTGTGGCAGAGATTTTAATGGACTTGGCTCCTCGTGATAGTGGATCCTACATTGCTCTCTCGAACATGTATGCCTCTTTGGGAAATTGGGAGGAAGTAGCAAAGGTGAGATTGCGGATGAAAGATATGGACATTAGGAAAGACCCGGGAGGTAGTTCGATTGAGCTTGATGGAGCAATTCAAGAGTTTGTGGTGGAAGACGACTCTCATCCTAGAGCCGGAGAAATCCATTCAATGTTGGAGGAAATTTCCGAAAAACTGAGCTTGGAAGGCCATAGGCCTAACACCACACAAGTGTTGCTCAACATGGATGAAGAAGAAAAACAAAGTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

564

Amino Acids

62.42

Weight (kDa)

5.62

Isoelectric Point (pI)

45.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	196 - 228	5e-06	PPR repeat family
PPR_2	PF13041	227 - 269	1.7e-09	PPR repeat family
PPR_1	PF12854	227 - 255	4.9e-07	PPR repeat
PPR	PF01535	229 - 255	2.9e-09	PPR repeat
PPR_1	PF12854	326 - 356	2.1e-06	PPR repeat
PPR_2	PF13041	327 - 375	1.4e-12	PPR repeat family
PPR	PF01535	330 - 360	8.4e-08	PPR repeat
E_motif	PF20431	447 - 507	3.7e-16	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013442)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48910
fragaria_vesca	FvH4_2g19560 FvH4_2g19570
malus_domestica	MD05G1179700.v1.1 MD10G1169300.v1.1
prunus_persica	Prupe.6G095600_v2.0.a1 Prupe.8G207000_v2.0.a1
pyrus_communis	pycom05g16620 pycom10g14610
rosa_chinensis	RchiOBHm_Chr6g0285331
rosa_laevigata	RLG00000012653
rosa_multiflora	Rmu_sc0011958.1_g000003
rosa_roxburghii	Rroxscaffold_7G00183350
rosa_rugosa	Rorug06G0173600
rosa_samantha	Rh6AG284300 Rh6BG285100 Rh6DG279600
rosa_wichuraiana	Rw6G024470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	102
AccII	CGCG	1 cut(s)	716
AciI	CCGC	6 cut(s)	150, 153, 166, 190, 1011, 1471
AclWI	GGATC	2 cut(s)	1395, 1408
AcsI	RAATTY	2 cut(s)	523, 1602
AcuI	CTGAAG	2 cut(s)	357, 1278
AfaI	GTAC	3 cut(s)	620, 713, 923
AfiI	CCNNNNNNNGG	1 cut(s)	1574
AflIII	ACRYGT	2 cut(s)	1357, 1422
AgsI	TTSAA	5 cut(s)	565, 839, 1162, 1538, 1590
AjnI	CCWGG	2 cut(s)	248, 689
AjuI	GAANNNNNNNTTGG	2 cut(s)	434, 466
AleI	CACNNNNGTG	2 cut(s)	1029, 1649
AluBI	AGCT	9 cut(s)	269, 282, 644, 655, 1073, 1256, 1264, 1522, 1620
AluI	AGCT	9 cut(s)	269, 282, 644, 655, 1073, 1256, 1264, 1522, 1620
Alw21I	GWGCWC	3 cut(s)	271, 284, 835
Alw26I	GTCTC	1 cut(s)	84
Alw44I	GTGCAC	1 cut(s)	831
AlwI	GGATC	2 cut(s)	1395, 1408
Ama87I	CYCGRG	1 cut(s)	1501
AoxI	GGCC	2 cut(s)	1627, 1634
ApaLI	GTGCAC	1 cut(s)	831
ApeKI	GCWGC	2 cut(s)	644, 1081
ApoI	RAATTY	2 cut(s)	523, 1602
AspLEI	GCGC	3 cut(s)	206, 718, 1312
AspS9I	GGNCC	1 cut(s)	350
AsuC2I	CCSGG	4 cut(s)	709, 755, 1502, 1503
AsuHPI	GGTGA	5 cut(s)	35, 211, 355, 496, 1474
AsuII	TTCGAA	1 cut(s)	1058
AvaI	CYCGRG	1 cut(s)	1501
AvaII	GGWCC	1 cut(s)	350
BaeGI	GKGCMC	1 cut(s)	835
BaeI	ACNNNNGTAYC	6 cut(s)	178, 211, 845, 878, 1090, 1123
BamHI	GGATCC	1 cut(s)	1400
BanII	GRGCYC	2 cut(s)	271, 284
BarI	GAAGNNNNNNTAC	2 cut(s)	1251, 1283
BauI	CACGAG	1 cut(s)	1389
BbsI	GAAGAC	1 cut(s)	1560
Bbv12I	GWGCWC	3 cut(s)	271, 284, 835
BbvI	GCAGC	2 cut(s)	631, 1068
BccI	CCATC	8 cut(s)	55, 92, 220, 332, 455, 608, 1057, 1520
BceAI	ACGGC	1 cut(s)	839
BciT130I	CCWGG	2 cut(s)	250, 691
BciVI	GTATCC	2 cut(s)	206, 846
BcnI	CCSGG	4 cut(s)	709, 755, 1502, 1503
BcoDI	GTCTC	1 cut(s)	84
BfaI	CTAG	7 cut(s)	537, 842, 956, 1046, 1086, 1194, 1569
BfoI	RGCGCY	1 cut(s)	1313
BfuAI	ACCTGC	1 cut(s)	102
BfuI	GTATCC	2 cut(s)	206, 846
BisI	GCNGC	4 cut(s)	150, 153, 645, 1082
BlsI	GCNGC	4 cut(s)	151, 154, 646, 1083
Bme1390I	CCNGG	6 cut(s)	250, 691, 709, 755, 1502, 1503
Bme18I	GGWCC	1 cut(s)	350
BmeT110I	CYCGRG	1 cut(s)	1501
BmgT120I	GGNCC	1 cut(s)	350
BmiI	GGNNCC	4 cut(s)	351, 352, 1386, 1402
BmrFI	CCNGG	6 cut(s)	250, 691, 709, 755, 1502, 1503
BmsI	GCATC	4 cut(s)	295, 508, 1030, 1320
BpiI	GAAGAC	1 cut(s)	1560
Bpu14I	TTCGAA	1 cut(s)	1058
BpuEI	CTTGAG	2 cut(s)	428, 1132
BpuMI	CCSGG	4 cut(s)	709, 755, 1502, 1503
Bsa29I	ATCGAT	1 cut(s)	1344
BsaI	GGTCTC	1 cut(s)	84
BsaJI	CCNNGG	1 cut(s)	1501
Bsc4I	CCNNNNNNNGG	1 cut(s)	1574
Bse118I	RCCGGY	2 cut(s)	811, 1130
Bse3DI	GCAATG	2 cut(s)	592, 1407
BseBI	CCWGG	2 cut(s)	250, 691
BseCI	ATCGAT	1 cut(s)	1344
BseDI	CCNNGG	1 cut(s)	1501
BseGI	GGATG	7 cut(s)	495, 523, 1045, 1217, 1479, 1564, 1672
BseLI	CCNNNNNNNGG	1 cut(s)	1574
BseMI	GCAATG	2 cut(s)	592, 1407
BseMII	CTCAG	1 cut(s)	1607
BseRI	GAGGAG	1 cut(s)	1377
BseSI	GKGCMC	1 cut(s)	835
BseXI	GCAGC	2 cut(s)	631, 1068
BsgI	GTGCAG	2 cut(s)	80, 1257
Bsh1236I	CGCG	1 cut(s)	716
Bsh1285I	CGRYCG	1 cut(s)	1030
BshFI	GGCC	2 cut(s)	1629, 1636
BshVI	ATCGAT	1 cut(s)	1344
BsiEI	CGRYCG	1 cut(s)	1030
BsiHKAI	GWGCWC	3 cut(s)	271, 284, 835
BsiHKCI	CYCGRG	1 cut(s)	1501
BsiSI	CCGG	6 cut(s)	708, 754, 812, 1131, 1502, 1575
BslFI	GGGAC	1 cut(s)	363
BslI	CCNNNNNNNGG	1 cut(s)	1574
BsmAI	GTCTC	1 cut(s)	84
BsmFI	GGGAC	1 cut(s)	363
BsmI	GAATGC	2 cut(s)	700, 1003
BsnI	GGCC	2 cut(s)	1629, 1636
Bso31I	GGTCTC	1 cut(s)	84
BsoBI	CYCGRG	1 cut(s)	1501
Bsp119I	TTCGAA	1 cut(s)	1058
Bsp1286I	GDGCHC	3 cut(s)	271, 284, 835
Bsp143I	GATC	2 cut(s)	1151, 1400
BspACI	CCGC	6 cut(s)	150, 153, 166, 190, 1011, 1471
BspANI	GGCC	2 cut(s)	1629, 1636
BspCNI	CTCAG	1 cut(s)	1608
BspDI	ATCGAT	1 cut(s)	1344
BspFNI	CGCG	1 cut(s)	716
BspLI	GGNNCC	4 cut(s)	351, 352, 1386, 1402
BspMI	ACCTGC	1 cut(s)	102
BspPI	GGATC	2 cut(s)	1395, 1408
BspQI	GCTCTTC	1 cut(s)	1254
BspT104I	TTCGAA	1 cut(s)	1058
BspTNI	GGTCTC	1 cut(s)	84
BsrDI	GCAATG	2 cut(s)	592, 1407
BsrFI	RCCGGY	2 cut(s)	811, 1130
BssAI	RCCGGY	2 cut(s)	811, 1130
BssECI	CCNNGG	1 cut(s)	1501
BssMI	GATC	2 cut(s)	1151, 1400
BssSI	CACGAG	1 cut(s)	1389
Bst2BI	CACGAG	1 cut(s)	1389
Bst2UI	CCWGG	2 cut(s)	250, 691
Bst4CI	ACNGT	4 cut(s)	13, 36, 926, 1028
Bst6I	CTCTTC	3 cut(s)	62, 317, 1254
BstBI	TTCGAA	1 cut(s)	1058
BstC8I	GCNNGC	2 cut(s)	813, 1324
BstDEI	CTNAG	2 cut(s)	1186, 1616
BstF5I	GGATG	7 cut(s)	495, 523, 1045, 1217, 1479, 1564, 1672
BstFNI	CGCG	1 cut(s)	716
BstH2I	RGCGCY	1 cut(s)	1313
BstHHI	GCGC	3 cut(s)	206, 718, 1312
BstKTI	GATC	2 cut(s)	1154, 1403
BstMAI	GTCTC	1 cut(s)	84
BstMBI	GATC	2 cut(s)	1151, 1400
BstMCI	CGRYCG	1 cut(s)	1030
BstMWI	GCNNNNNNNGC	2 cut(s)	1285, 1626
BstNI	CCWGG	2 cut(s)	250, 691
BstNSI	RCATGY	2 cut(s)	1279, 1426
BstSCI	CCNGG	6 cut(s)	248, 689, 707, 753, 1500, 1501
BstSLI	GKGCMC	1 cut(s)	835
BstUI	CGCG	1 cut(s)	716
BstV1I	GCAGC	2 cut(s)	631, 1068
BstV2I	GAAGAC	1 cut(s)	1560
BstX2I	RGATCY	1 cut(s)	1400
BstYI	RGATCY	1 cut(s)	1400
Bsu15I	ATCGAT	1 cut(s)	1344
BsuI	GTATCC	2 cut(s)	206, 846
BsuRI	GGCC	2 cut(s)	1629, 1636
BsuTUI	ATCGAT	1 cut(s)	1344
BtgZI	GCGATG	1 cut(s)	713
BtsCI	GGATG	7 cut(s)	495, 523, 1045, 1217, 1479, 1564, 1672
BtsIMutI	CAGTG	1 cut(s)	381
BveI	ACCTGC	1 cut(s)	102
Cac8I	GCNNGC	2 cut(s)	813, 1324
CfoI	GCGC	3 cut(s)	206, 718, 1312
Cfr10I	RCCGGY	2 cut(s)	811, 1130
Cfr13I	GGNCC	1 cut(s)	350
Cfr9I	CCCGGG	1 cut(s)	1501
ClaI	ATCGAT	1 cut(s)	1344
Csp6I	GTAC	3 cut(s)	619, 712, 922
CviAII	CATG	8 cut(s)	75, 428, 433, 1127, 1276, 1302, 1423, 1663
CviQI	GTAC	3 cut(s)	619, 712, 922
DdeI	CTNAG	2 cut(s)	1186, 1616
DpnI	GATC	2 cut(s)	1153, 1402
DpnII	GATC	2 cut(s)	1151, 1400
DraI	TTTAAA	1 cut(s)	732
Eam1104I	CTCTTC	3 cut(s)	62, 317, 1254
EarI	CTCTTC	3 cut(s)	62, 317, 1254
Ecl136II	GAGCTC	2 cut(s)	269, 282
Eco147I	AGGCCT	1 cut(s)	1636
Eco24I	GRGCYC	2 cut(s)	271, 284
Eco31I	GGTCTC	1 cut(s)	84
Eco32I	GATATC	2 cut(s)	705, 819
Eco47I	GGWCC	1 cut(s)	350
Eco53kI	GAGCTC	2 cut(s)	269, 282
Eco57I	CTGAAG	2 cut(s)	357, 1278
Eco88I	CYCGRG	1 cut(s)	1501
EcoICRI	GAGCTC	2 cut(s)	269, 282
EcoO109I	RGGNCCY	1 cut(s)	350
EcoRII	CCWGG	2 cut(s)	248, 689
EcoRV	GATATC	2 cut(s)	705, 819
EcoT38I	GRGCYC	2 cut(s)	271, 284
FaeI	CATG	8 cut(s)	78, 431, 436, 1130, 1279, 1305, 1426, 1666
FalI	AAGNNNNNCTT	2 cut(s)	350, 382
FaqI	GGGAC	1 cut(s)	363
FatI	CATG	8 cut(s)	74, 427, 432, 1126, 1275, 1301, 1422, 1662
FauNDI	CATATG	1 cut(s)	1167
Fnu4HI	GCNGC	4 cut(s)	150, 153, 645, 1082
FokI	GGATG	7 cut(s)	502, 530, 1052, 1224, 1486, 1551, 1679
FriOI	GRGCYC	2 cut(s)	271, 284
Fsp4HI	GCNGC	4 cut(s)	150, 153, 645, 1082
FspBI	CTAG	7 cut(s)	537, 842, 956, 1046, 1086, 1194, 1569
GlaI	GCGC	3 cut(s)	205, 717, 1311
GluI	GCNGC	4 cut(s)	150, 153, 645, 1082
HaeII	RGCGCY	1 cut(s)	1313
HaeIII	GGCC	2 cut(s)	1629, 1636
HapII	CCGG	6 cut(s)	708, 754, 812, 1131, 1502, 1575
HhaI	GCGC	3 cut(s)	206, 718, 1312
Hin1II	CATG	8 cut(s)	78, 431, 436, 1130, 1279, 1305, 1426, 1666
Hin6I	GCGC	3 cut(s)	204, 716, 1310
HinP1I	GCGC	3 cut(s)	204, 716, 1310
HincII	GTYRAC	1 cut(s)	289
HindII	GTYRAC	1 cut(s)	289
HinfI	GANTC	4 cut(s)	403, 879, 1197, 1559
HpaI	GTTAAC	1 cut(s)	289
HpaII	CCGG	6 cut(s)	708, 754, 812, 1131, 1502, 1575
HphI	GGTGA	5 cut(s)	35, 211, 355, 496, 1474
Hpy166II	GTNNAC	5 cut(s)	106, 289, 363, 833, 1355
Hpy188I	TCNGA	3 cut(s)	89, 266, 1609
Hpy188III	TCNNGA	7 cut(s)	181, 407, 883, 1111, 1391, 1417, 1538
Hpy8I	GTNNAC	5 cut(s)	106, 289, 363, 833, 1355
HpyAV	CCTTC	7 cut(s)	376, 381, 564, 940, 1138, 1300, 1619
HpyCH4III	ACNGT	4 cut(s)	13, 36, 926, 1028
HpyCH4IV	ACGT	2 cut(s)	621, 1357
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1285, 1626
HpyF3I	CTNAG	2 cut(s)	1186, 1616
HpySE526I	ACGT	2 cut(s)	621, 1357
Hsp92II	CATG	8 cut(s)	78, 431, 436, 1130, 1279, 1305, 1426, 1666
HspAI	GCGC	3 cut(s)	204, 716, 1310
KflI	GGGWCCC	1 cut(s)	350
KroI	GCCGGC	1 cut(s)	811
KroNI	GCCGGC	1 cut(s)	813
KspAI	GTTAAC	1 cut(s)	289
Kzo9I	GATC	2 cut(s)	1151, 1400
LguI	GCTCTTC	1 cut(s)	1254
LmnI	GCTCC	4 cut(s)	652, 936, 1390, 1529
Lsp1109I	GCAGC	2 cut(s)	631, 1068
LweI	GCATC	4 cut(s)	295, 508, 1030, 1320
MaeI	CTAG	7 cut(s)	537, 842, 956, 1046, 1086, 1194, 1569
MaeII	ACGT	2 cut(s)	621, 1357
MaeIII	GTNAC	3 cut(s)	790, 1093, 1297
MalI	GATC	2 cut(s)	1153, 1402
MboI	GATC	2 cut(s)	1151, 1400
MflI	RGATCY	1 cut(s)	1400
MhlI	GDGCHC	3 cut(s)	271, 284, 835
MluCI	AATT	7 cut(s)	523, 784, 1005, 1281, 1441, 1533, 1602
MlyI	GAGTC	1 cut(s)	1553
MmeI	TCCRAC	1 cut(s)	1575
MroNI	GCCGGC	1 cut(s)	811
MseI	TTAA	4 cut(s)	288, 731, 1173, 1373
MslI	CAYNNNNRTG	6 cut(s)	224, 437, 861, 1029, 1346, 1649
MspI	CCGG	6 cut(s)	708, 754, 812, 1131, 1502, 1575
MspR9I	CCNGG	6 cut(s)	250, 691, 709, 755, 1502, 1503
Mva1269I	GAATGC	2 cut(s)	700, 1003
MvaI	CCWGG	2 cut(s)	250, 691
MvnI	CGCG	1 cut(s)	716
MwoI	GCNNNNNNNGC	2 cut(s)	1285, 1626
NaeI	GCCGGC	1 cut(s)	813
NciI	CCSGG	4 cut(s)	709, 755, 1502, 1503
NdeI	CATATG	1 cut(s)	1167
NdeII	GATC	2 cut(s)	1151, 1400
NgoMIV	GCCGGC	1 cut(s)	811
NlaIII	CATG	8 cut(s)	78, 431, 436, 1130, 1279, 1305, 1426, 1666
NlaIV	GGNNCC	4 cut(s)	351, 352, 1386, 1402
NmuCI	GTSAC	1 cut(s)	790
NspI	RCATGY	2 cut(s)	1279, 1426
NspV	TTCGAA	1 cut(s)	1058
OliI	CACNNNNGTG	2 cut(s)	1029, 1649
PceI	AGGCCT	1 cut(s)	1636
PciI	ACATGT	1 cut(s)	1422
PciSI	GCTCTTC	1 cut(s)	1254
PctI	GAATGC	2 cut(s)	700, 1003
PdiI	GCCGGC	1 cut(s)	813
PfeI	GAWTC	3 cut(s)	403, 879, 1197
PfoI	TCCNGGA	3 cut(s)	248, 689, 753
PkrI	GCNGC	4 cut(s)	151, 154, 646, 1083
PleI	GAGTC	1 cut(s)	1553
PpsI	GAGTC	1 cut(s)	1553
PpuMI	RGGWCCY	1 cut(s)	350
PscI	ACATGT	1 cut(s)	1422
Psp124BI	GAGCTC	2 cut(s)	271, 284
Psp5II	RGGWCCY	1 cut(s)	350
Psp6I	CCWGG	2 cut(s)	248, 689
PspGI	CCWGG	2 cut(s)	248, 689
PspN4I	GGNNCC	4 cut(s)	351, 352, 1386, 1402
PspPI	GGNCC	1 cut(s)	350
PspPPI	RGGWCCY	1 cut(s)	350
PsuI	RGATCY	1 cut(s)	1400
RsaI	GTAC	3 cut(s)	620, 713, 923
RsaNI	GTAC	3 cut(s)	619, 712, 922
RseI	CAYNNNNRTG	6 cut(s)	224, 437, 861, 1029, 1346, 1649
SacI	GAGCTC	2 cut(s)	271, 284
SapI	GCTCTTC	1 cut(s)	1254
SaqAI	TTAA	4 cut(s)	288, 731, 1173, 1373
SatI	GCNGC	4 cut(s)	150, 153, 645, 1082
Sau3AI	GATC	2 cut(s)	1151, 1400
Sau96I	GGNCC	1 cut(s)	350
SchI	GAGTC	1 cut(s)	1553
ScrFI	CCNGG	6 cut(s)	250, 691, 709, 755, 1502, 1503
SduI	GDGCHC	3 cut(s)	271, 284, 835
SfaNI	GCATC	4 cut(s)	295, 508, 1030, 1320
SfuI	TTCGAA	1 cut(s)	1058
SinI	GGWCC	1 cut(s)	350
SmaI	CCCGGG	1 cut(s)	1503
SmiMI	CAYNNNNRTG	6 cut(s)	224, 437, 861, 1029, 1346, 1649
SmlI	CTYRAG	2 cut(s)	407, 1111
SmoI	CTYRAG	2 cut(s)	407, 1111
Sse9I	AATT	7 cut(s)	523, 784, 1005, 1281, 1441, 1533, 1602
SseBI	AGGCCT	1 cut(s)	1636
SsiI	CCGC	6 cut(s)	150, 153, 166, 190, 1011, 1471
SspMI	CTAG	7 cut(s)	537, 842, 956, 1046, 1086, 1194, 1569
SstI	GAGCTC	2 cut(s)	271, 284
StuI	AGGCCT	1 cut(s)	1636
StyD4I	CCNGG	6 cut(s)	248, 689, 707, 753, 1500, 1501
TaaI	ACNGT	4 cut(s)	13, 36, 926, 1028
TaiI	ACGT	2 cut(s)	624, 1360
TaqI	TCGA	8 cut(s)	182, 303, 660, 1058, 1200, 1344, 1418, 1514
TasI	AATT	7 cut(s)	523, 784, 1005, 1281, 1441, 1533, 1602
TatI	WGTACW	1 cut(s)	921
TauI	GCSGC	2 cut(s)	152, 155
TfiI	GAWTC	3 cut(s)	403, 879, 1197
Tru1I	TTAA	4 cut(s)	288, 731, 1173, 1373
Tru9I	TTAA	4 cut(s)	288, 731, 1173, 1373
TscAI	CASTG	1 cut(s)	381
TseFI	GTSAC	1 cut(s)	790
TseI	GCWGC	2 cut(s)	644, 1081
Tsp45I	GTSAC	1 cut(s)	790
TspDTI	ATGAA	3 cut(s)	416, 1490, 1683
TspGWI	ACGGA	1 cut(s)	202
TspMI	CCCGGG	1 cut(s)	1501
TspRI	CASTG	1 cut(s)	381
VneI	GTGCAC	1 cut(s)	831
VpaK11BI	GGWCC	1 cut(s)	350
XapI	RAATTY	2 cut(s)	523, 1602
XceI	RCATGY	2 cut(s)	1279, 1426
XmaI	CCCGGG	1 cut(s)	1501
XspI	CTAG	7 cut(s)	537, 842, 956, 1046, 1086, 1194, 1569

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.