Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0013442

Physical Location & Seq

Genomic Coordinates Forward (+)

22429007 .. 22430962

Gene Structure 1956 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00183350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGAACTCCACCATCTACAACCCCACAACTCCTCACCCATCTTCACAATTCCCACAAATCAAAACATGCAAAACCTTGAAAGACTTGCAACAAGTGCATGCCCACTTCATCAAAACCCGCCAAATCCACGACCCTCTTGCCGCTGCCGAAATCCTCCGATTCTACGCCCTCTCAAATCACCGCAACATTGAGTATGCTCGTGCCGTATTCAACCAAATCCAGACACCCAATTGCTTCTCCTGGAACACCATCGTCAGAGCCCTTGCCGAGAGCTCTGTTTCCGAGCACCCACTTGAGGCTCTGTTTTTGTTTTATCGAATGGTTTGCGATGGTTTGGTGGCGCCAAATAAGTTCACATTTCCTTCTGTGTTGAAGGCCTGTTCTAGAATAGGGAATGCTCAGGTTGGCAAAAGTGTTCATGGGATGGTTGTGAAGTTTGGGTTGGATGATGATGAGTTTGTTGTGAGTAGTCTTGTGAGGATGTATGTAATGTGTGGGGTTATGGAGGATGCACATTCATTGTTTTCTAGGAGTGTAGCTGATTGTGGTGGTTTGAATGAGAAGAAGCAAGAGGGTAATGTGGTTTTGTGGAATTTGATAGTTGATGGGCATGTGAGACTCGGGGAGTTTGGAGCTGCACGGGAGCTGTTCGACAAAATGCCTCAAAGAAGTGTTGTTTCGTGGAATGCGATGATATCCGCTTATGCGCAAAATGGGTTATTTAGGGAAGCTGTAGAAATGTTCCGTGATATGCAGATTGGGGATGTATGCCCAAATTATGTGACTTTGGTTAGCGTCTTGCCTGCGATAGCACGACTTGGTGTGCTTGAATTGGGGAAATGGGTGCATTTGTATGCCGAGAAGCATAAGATTGGGATTGATGATGTGCTTGGTTCTGCTTTGGTTGATATGTATTCCAAATGCGGCAACATTGAGAAGGCGCTTCTAGTTTTTGAGCAACTGCCTAAAAAGAACGTGATCACTTGGAATGCCATAATCAGTGGGCTTGCTATGCATGGTAGAGGAAAGGATGCACTAGATTATTTTTCAAAGATGGAAAGAGCTGGTGTGGTGCCTAGTGATGTAACATATATTGGTCTCTTGAGTGCTTGTAGCCATGGAGGTATGGTGGAGCAGGGCAGATCACTCTTCAACCACATGATTAATGTAGTTGGCTTAGAACCTAGAATCGAGCATTATGGGTGTGTGGTCGATTTATTAGGCCGTGCTGGACTGTTAGAAGAAGCTGAAGAGCTTATACTAAATATGCCAATTCAGCCGGATGATGTTATATGGAAGGCATTGCTTGGTGCTTGCAAGGTACAAGGGAATATTGAGATGGGAGAACGTGTCGCAAAGATTTTGATGGACTTGGCTCCCCATGATAGTGGATCATATGTTGCTCTATCGAACATGTATGCATCTTTGGGAAATTGGGAGGCAGTTTCAAATGTGAGATTGTTGATGAAGGATATGGACATTAGGAAAGACCCCGGTGGTAGTTGGATTGAGCTTGATGGAGTGCTTCATGAATTTCTGGTTGAAGATCAATCACATTCTAAAGCAGGAGAAATCCATTCAATGCTGGAAGAAATTTCCAACAAGTTAAGGTTAGAAGGATATAAGCCTAACACCACACAAGTATTGCTCAACGTGGCTGAAGCAGAAAAACAAAGTGCTTTACATTATCACAGTGAGAAAATTGCAGTTGCCTTTGGCTTAATCAGTACAGCCCCTCAATCGCCACTTCGAATTGTTAAGAACCTACGCATATGCGAGGATTGTCACTCCTCTATAAAGCTAATCTCAAAAATTTACAAACGAAAGATCATTGTTCGGGACCGTAAGCGCTTCCACCACTTTGAGCATGGGTTGTGCTCTTGCATGGACTACTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

632

Amino Acids

70.7

Weight (kDa)

6.58

Isoelectric Point (pI)

44.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	224 - 267	2.3e-09	PPR repeat family
PPR	PF01535	226 - 252	4.1e-09	PPR repeat
PPR_2	PF13041	324 - 372	2.9e-12	PPR repeat family
PPR	PF01535	327 - 357	5.2e-07	PPR repeat
E_motif	PF20431	444 - 504	4.2e-17	E motif
DYW_deaminase	PF14432	540 - 632	2.4e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013442)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48910
fragaria_vesca	FvH4_2g19560 FvH4_2g19570
malus_domestica	MD05G1179700.v1.1 MD10G1169300.v1.1
prunus_persica	Prupe.6G095600_v2.0.a1 Prupe.8G207000_v2.0.a1
pyrus_communis	pycom05g16620 pycom10g14610
rosa_chinensis	RchiOBHm_Chr6g0285331
rosa_laevigata	RLG00000012653
rosa_multiflora	Rmu_sc0011958.1_g000003
rosa_roxburghii	Rroxscaffold_7G00183350
rosa_rugosa	Rorug06G0173600
rosa_samantha	Rh6AG284300 Rh6BG285100 Rh6DG279600
rosa_wichuraiana	Rw6G024470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	708
AccB1I	GGYRCC	2 cut(s)	340, 1072
AciI	CCGC	5 cut(s)	118, 141, 181, 699, 924
AclWI	GGATC	1 cut(s)	1399
AcsI	RAATTY	4 cut(s)	592, 1532, 1593, 1812
AcuI	CTGAAG	2 cut(s)	1269, 1680
AcyI	GRCGYC	1 cut(s)	341
AfaI	GTAC	2 cut(s)	1323, 1729
AfeI	AGCGCT	1 cut(s)	1850
AfiI	CCNNNNNNNGG	1 cut(s)	295
AflIII	ACRYGT	2 cut(s)	1348, 1413
AjnI	CCWGG	1 cut(s)	239
AjuI	GAANNNNNNNTTGG	2 cut(s)	425, 457
Alw21I	GWGCWC	3 cut(s)	275, 288, 1880
Alw26I	GTCTC	2 cut(s)	610, 1103
AlwI	GGATC	1 cut(s)	1399
Ama87I	CYCGRG	1 cut(s)	620
Aor51HI	AGCGCT	1 cut(s)	1850
AoxI	GGCC	2 cut(s)	375, 1222
ApeKI	GCWGC	2 cut(s)	143, 635
ApoI	RAATTY	4 cut(s)	592, 1532, 1593, 1812
AseI	ATTAAT	1 cut(s)	1164
AspLEI	GCGC	4 cut(s)	343, 709, 943, 1851
AspS9I	GGNCC	1 cut(s)	1840
AsuC2I	CCSGG	1 cut(s)	1494
AsuHPI	GGTGA	2 cut(s)	26, 170
AsuII	TTCGAA	1 cut(s)	1750
AvaI	CYCGRG	1 cut(s)	620
AvaII	GGWCC	1 cut(s)	1840
BanI	GGYRCC	2 cut(s)	340, 1072
BanII	GRGCYC	2 cut(s)	262, 275
BarI	GAAGNNNNNNTAC	2 cut(s)	1242, 1274
BauI	CACGAG	1 cut(s)	198
Bbv12I	GWGCWC	3 cut(s)	275, 288, 1880
BbvI	GCAGC	2 cut(s)	130, 622
BceAI	ACGGC	2 cut(s)	188, 1209
BcgI	CGANNNNNNTGC	4 cut(s)	119, 153, 306, 340
BciT130I	CCWGG	1 cut(s)	241
BclI	TGATCA	1 cut(s)	978
BcnI	CCSGG	1 cut(s)	1494
BcoDI	GTCTC	2 cut(s)	610, 1103
BfaI	CTAG	6 cut(s)	384, 528, 947, 1037, 1077, 1185
BfmI	CTRYAG	1 cut(s)	732
BfoI	RGCGCY	3 cut(s)	344, 944, 1852
BisI	GCNGC	4 cut(s)	141, 144, 636, 925
BlsI	GCNGC	4 cut(s)	142, 145, 637, 926
Bme1390I	CCNGG	2 cut(s)	241, 1494
Bme18I	GGWCC	1 cut(s)	1840
BmeT110I	CYCGRG	1 cut(s)	620
BmgT120I	GGNCC	1 cut(s)	1840
BmiI	GGNNCC	4 cut(s)	342, 1074, 1377, 1841
BmrFI	CCNGG	2 cut(s)	241, 1494
BmsI	GCATC	3 cut(s)	499, 1021, 1430
Bpu10I	CCTNAGC	1 cut(s)	399
Bpu14I	TTCGAA	1 cut(s)	1750
BpuEI	CTTGAG	2 cut(s)	314, 1123
BpuMI	CCSGG	1 cut(s)	1494
BsaHI	GRCGYC	1 cut(s)	341
BsaI	GGTCTC	1 cut(s)	1103
BsaJI	CCNNGG	2 cut(s)	1117, 1492
BsaXI	ACNNNNNCTCC	4 cut(s)	1113, 1143, 1335, 1365
Bsc4I	CCNNNNNNNGG	1 cut(s)	295
Bse1I	ACTGG	1 cut(s)	1898
Bse3DI	GCAATG	1 cut(s)	1301
BseBI	CCWGG	1 cut(s)	241
BseDI	CCNNGG	2 cut(s)	1117, 1492
BseGI	GGATG	7 cut(s)	429, 451, 486, 514, 769, 1036, 1288
BseLI	CCNNNNNNNGG	1 cut(s)	295
BseMI	GCAATG	1 cut(s)	1301
BseMII	CTCAG	1 cut(s)	413
BseNI	ACTGG	1 cut(s)	1898
BseRI	GAGGAG	2 cut(s)	21, 1780
BseXI	GCAGC	2 cut(s)	130, 622
BsgI	GTGCAG	1 cut(s)	621
BshFI	GGCC	2 cut(s)	377, 1224
BshNI	GGYRCC	2 cut(s)	340, 1072
BsiHKAI	GWGCWC	3 cut(s)	275, 288, 1880
BsiHKCI	CYCGRG	1 cut(s)	620
BsiSI	CCGG	2 cut(s)	1280, 1494
BslFI	GGGAC	1 cut(s)	1853
BslI	CCNNNNNNNGG	1 cut(s)	295
BsmAI	GTCTC	2 cut(s)	610, 1103
BsmFI	GGGAC	1 cut(s)	1853
BsmI	GAATGC	3 cut(s)	400, 691, 994
BsnI	GGCC	2 cut(s)	377, 1224
Bso31I	GGTCTC	1 cut(s)	1103
BsoBI	CYCGRG	1 cut(s)	620
Bsp119I	TTCGAA	1 cut(s)	1750
Bsp1286I	GDGCHC	4 cut(s)	262, 275, 288, 1880
Bsp143I	GATC	5 cut(s)	978, 1142, 1391, 1546, 1827
Bsp19I	CCATGG	1 cut(s)	1117
BspACI	CCGC	5 cut(s)	118, 141, 181, 699, 924
BspANI	GGCC	2 cut(s)	377, 1224
BspCNI	CTCAG	1 cut(s)	412
BspHI	TCATGA	1 cut(s)	1528
BspLI	GGNNCC	4 cut(s)	342, 1074, 1377, 1841
BspPI	GGATC	1 cut(s)	1399
BspQI	GCTCTTC	1 cut(s)	1245
BspT104I	TTCGAA	1 cut(s)	1750
BspT107I	GGYRCC	2 cut(s)	340, 1072
BspTNI	GGTCTC	1 cut(s)	1103
BsrDI	GCAATG	1 cut(s)	1301
BsrI	ACTGG	1 cut(s)	1898
BssECI	CCNNGG	2 cut(s)	1117, 1492
BssMI	GATC	5 cut(s)	978, 1142, 1391, 1546, 1827
BssNI	GRCGYC	1 cut(s)	341
BssSI	CACGAG	1 cut(s)	198
BssT1I	CCWWGG	1 cut(s)	1117
Bst2BI	CACGAG	1 cut(s)	198
Bst2UI	CCWGG	1 cut(s)	241
Bst4CI	ACNGT	3 cut(s)	1236, 1694, 1844
Bst6I	CTCTTC	2 cut(s)	1154, 1245
BstACI	GRCGYC	1 cut(s)	341
BstAPI	GCANNNNNTGC	1 cut(s)	94
BstBI	TTCGAA	1 cut(s)	1750
BstC8I	GCNNGC	4 cut(s)	99, 804, 1008, 1315
BstDEI	CTNAG	2 cut(s)	399, 1177
BstDSI	CCRYGG	1 cut(s)	1117
BstF5I	GGATG	7 cut(s)	429, 451, 486, 514, 769, 1036, 1288
BstH2I	RGCGCY	3 cut(s)	344, 944, 1852
BstHHI	GCGC	4 cut(s)	343, 709, 943, 1851
BstKTI	GATC	5 cut(s)	981, 1145, 1394, 1549, 1830
BstMAI	GTCTC	2 cut(s)	610, 1103
BstMBI	GATC	5 cut(s)	978, 1142, 1391, 1546, 1827
BstMWI	GCNNNNNNNGC	3 cut(s)	94, 1012, 1276
BstNI	CCWGG	1 cut(s)	241
BstNSI	RCATGY	4 cut(s)	69, 101, 614, 1417
BstSCI	CCNGG	2 cut(s)	239, 1492
BstSFI	CTRYAG	1 cut(s)	732
BstV1I	GCAGC	2 cut(s)	130, 622
BstXI	CCANNNNNNTGG	1 cut(s)	1388
BsuRI	GGCC	2 cut(s)	377, 1224
BtgI	CCRYGG	1 cut(s)	1117
BtgZI	GCGATG	2 cut(s)	342, 704
BtsCI	GGATG	7 cut(s)	429, 451, 486, 514, 769, 1036, 1288
BtsIMutI	CAGTG	2 cut(s)	1006, 1699
Cac8I	GCNNGC	4 cut(s)	99, 804, 1008, 1315
CciI	TCATGA	1 cut(s)	1528
CfoI	GCGC	4 cut(s)	343, 709, 943, 1851
Cfr13I	GGNCC	1 cut(s)	1840
CseI	GACGC	1 cut(s)	784
Csp6I	GTAC	2 cut(s)	1322, 1728
CviQI	GTAC	2 cut(s)	1322, 1728
DdeI	CTNAG	2 cut(s)	399, 1177
DinI	GGCGCC	1 cut(s)	342
DpnI	GATC	5 cut(s)	980, 1144, 1393, 1548, 1829
DpnII	GATC	5 cut(s)	978, 1142, 1391, 1546, 1827
Eam1104I	CTCTTC	2 cut(s)	1154, 1245
EarI	CTCTTC	2 cut(s)	1154, 1245
Ecl136II	GAGCTC	1 cut(s)	273
Eco130I	CCWWGG	1 cut(s)	1117
Eco147I	AGGCCT	1 cut(s)	377
Eco24I	GRGCYC	2 cut(s)	262, 275
Eco31I	GGTCTC	1 cut(s)	1103
Eco32I	GATATC	1 cut(s)	696
Eco47I	GGWCC	1 cut(s)	1840
Eco47III	AGCGCT	1 cut(s)	1850
Eco53kI	GAGCTC	1 cut(s)	273
Eco57I	CTGAAG	2 cut(s)	1269, 1680
Eco88I	CYCGRG	1 cut(s)	620
EcoICRI	GAGCTC	1 cut(s)	273
EcoRII	CCWGG	1 cut(s)	239
EcoRV	GATATC	1 cut(s)	696
EcoT14I	CCWWGG	1 cut(s)	1117
EcoT22I	ATGCAT	2 cut(s)	1017, 1423
EcoT38I	GRGCYC	2 cut(s)	262, 275
EgeI	GGCGCC	1 cut(s)	342
EheI	GGCGCC	1 cut(s)	342
ErhI	CCWWGG	1 cut(s)	1117
FaqI	GGGAC	1 cut(s)	1853
FauI	CCCGC	1 cut(s)	125
FauNDI	CATATG	2 cut(s)	1396, 1772
FbaI	TGATCA	1 cut(s)	978
Fnu4HI	GCNGC	4 cut(s)	141, 144, 636, 925
FokI	GGATG	7 cut(s)	436, 458, 493, 521, 776, 1043, 1295
FriOI	GRGCYC	2 cut(s)	262, 275
Fsp4HI	GCNGC	4 cut(s)	141, 144, 636, 925
FspBI	CTAG	6 cut(s)	384, 528, 947, 1037, 1077, 1185
FspI	TGCGCA	1 cut(s)	708
GlaI	GCGC	4 cut(s)	342, 708, 942, 1850
GluI	GCNGC	4 cut(s)	141, 144, 636, 925
HaeII	RGCGCY	3 cut(s)	344, 944, 1852
HaeIII	GGCC	2 cut(s)	377, 1224
HapII	CCGG	2 cut(s)	1280, 1494
HgaI	GACGC	1 cut(s)	784
HhaI	GCGC	4 cut(s)	343, 709, 943, 1851
Hin1I	GRCGYC	1 cut(s)	341
Hin6I	GCGC	4 cut(s)	341, 707, 941, 1849
HinP1I	GCGC	4 cut(s)	341, 707, 941, 1849
HinfI	GANTC	3 cut(s)	159, 618, 1188
HpaII	CCGG	2 cut(s)	1280, 1494
HphI	GGTGA	2 cut(s)	26, 170
Hpy166II	GTNNAC	1 cut(s)	354
Hpy188I	TCNGA	3 cut(s)	158, 257, 283
Hpy188III	TCNNGA	5 cut(s)	220, 384, 1102, 1529, 1838
Hpy8I	GTNNAC	1 cut(s)	354
HpyAV	CCTTC	6 cut(s)	367, 372, 931, 1291, 1462, 1610
HpyCH4III	ACNGT	3 cut(s)	1236, 1694, 1844
HpyCH4IV	ACGT	3 cut(s)	975, 1348, 1653
HpyF10VI	GCNNNNNNNGC	3 cut(s)	94, 1012, 1276
HpyF3I	CTNAG	2 cut(s)	399, 1177
HpySE526I	ACGT	3 cut(s)	975, 1348, 1653
Hsp92I	GRCGYC	1 cut(s)	341
HspAI	GCGC	4 cut(s)	341, 707, 941, 1849
KasI	GGCGCC	1 cut(s)	340
Ksp22I	TGATCA	1 cut(s)	978
Kzo9I	GATC	5 cut(s)	978, 1142, 1391, 1546, 1827
LguI	GCTCTTC	1 cut(s)	1245
LmnI	GCTCC	4 cut(s)	632, 643, 1132, 1381
Lsp1109I	GCAGC	2 cut(s)	130, 622
LweI	GCATC	3 cut(s)	499, 1021, 1430
MaeI	CTAG	6 cut(s)	384, 528, 947, 1037, 1077, 1185
MaeII	ACGT	3 cut(s)	975, 1348, 1653
MaeIII	GTNAC	3 cut(s)	781, 1084, 1784
MalI	GATC	5 cut(s)	980, 1144, 1393, 1548, 1829
MboI	GATC	5 cut(s)	978, 1142, 1391, 1546, 1827
MboII	GAAGA	7 cut(s)	33, 574, 1141, 1253, 1262, 1556, 1601
MfeI	CAATTG	1 cut(s)	229
MhlI	GDGCHC	4 cut(s)	262, 275, 288, 1880
Mly113I	GGCGCC	1 cut(s)	341
MlyI	GAGTC	1 cut(s)	612
MmeI	TCCRAC	3 cut(s)	423, 1484, 1623
Mph1103I	ATGCAT	2 cut(s)	1017, 1423
MseI	TTAA	4 cut(s)	1164, 1607, 1721, 1758
MslI	CAYNNNNRTG	2 cut(s)	852, 1386
MspA1I	CMGCKG	1 cut(s)	143
MspI	CCGG	2 cut(s)	1280, 1494
MspR9I	CCNGG	2 cut(s)	241, 1494
MunI	CAATTG	1 cut(s)	229
Mva1269I	GAATGC	3 cut(s)	400, 691, 994
MvaI	CCWGG	1 cut(s)	241
MwoI	GCNNNNNNNGC	3 cut(s)	94, 1012, 1276
NarI	GGCGCC	1 cut(s)	341
NciI	CCSGG	1 cut(s)	1494
NcoI	CCATGG	1 cut(s)	1117
NdeI	CATATG	2 cut(s)	1396, 1772
NdeII	GATC	5 cut(s)	978, 1142, 1391, 1546, 1827
NlaIV	GGNNCC	4 cut(s)	342, 1074, 1377, 1841
NmeAIII	GCCGAG	2 cut(s)	292, 883
NmuCI	GTSAC	2 cut(s)	781, 1784
NsbI	TGCGCA	1 cut(s)	708
NsiI	ATGCAT	2 cut(s)	1017, 1423
NspI	RCATGY	4 cut(s)	69, 101, 614, 1417
NspV	TTCGAA	1 cut(s)	1750
PaeI	GCATGC	1 cut(s)	101
PagI	TCATGA	1 cut(s)	1528
PceI	AGGCCT	1 cut(s)	377
PciI	ACATGT	1 cut(s)	1413
PciSI	GCTCTTC	1 cut(s)	1245
PcsI	WCGNNNNNNNCGW	1 cut(s)	686
PctI	GAATGC	3 cut(s)	400, 691, 994
PfeI	GAWTC	2 cut(s)	159, 1188
PfoI	TCCNGGA	1 cut(s)	239
PkrI	GCNGC	4 cut(s)	142, 145, 637, 926
PleI	GAGTC	1 cut(s)	612
PluTI	GGCGCC	1 cut(s)	344
PpsI	GAGTC	1 cut(s)	612
PscI	ACATGT	1 cut(s)	1413
PshBI	ATTAAT	1 cut(s)	1164
Psp124BI	GAGCTC	1 cut(s)	275
Psp6I	CCWGG	1 cut(s)	239
PspGI	CCWGG	1 cut(s)	239
PspN4I	GGNNCC	4 cut(s)	342, 1074, 1377, 1841
PspPI	GGNCC	1 cut(s)	1840
RsaI	GTAC	2 cut(s)	1323, 1729
RsaNI	GTAC	2 cut(s)	1322, 1728
RseI	CAYNNNNRTG	2 cut(s)	852, 1386
SacI	GAGCTC	1 cut(s)	275
SapI	GCTCTTC	1 cut(s)	1245
SaqAI	TTAA	4 cut(s)	1164, 1607, 1721, 1758
SatI	GCNGC	4 cut(s)	141, 144, 636, 925
Sau3AI	GATC	5 cut(s)	978, 1142, 1391, 1546, 1827
Sau96I	GGNCC	1 cut(s)	1840
SchI	GAGTC	1 cut(s)	612
ScrFI	CCNGG	2 cut(s)	241, 1494
SduI	GDGCHC	4 cut(s)	262, 275, 288, 1880
SfaNI	GCATC	3 cut(s)	499, 1021, 1430
SfcI	CTRYAG	1 cut(s)	732
SfoI	GGCGCC	1 cut(s)	342
SfuI	TTCGAA	1 cut(s)	1750
SinI	GGWCC	1 cut(s)	1840
SmiMI	CAYNNNNRTG	2 cut(s)	852, 1386
SmlI	CTYRAG	2 cut(s)	293, 1102
SmoI	CTYRAG	2 cut(s)	293, 1102
SphI	GCATGC	1 cut(s)	101
SseBI	AGGCCT	1 cut(s)	377
SsiI	CCGC	5 cut(s)	118, 141, 181, 699, 924
SspDI	GGCGCC	1 cut(s)	340
SspI	AATATT	1 cut(s)	1333
SspMI	CTAG	6 cut(s)	384, 528, 947, 1037, 1077, 1185
SstI	GAGCTC	1 cut(s)	275
StuI	AGGCCT	1 cut(s)	377
StyD4I	CCNGG	2 cut(s)	239, 1492
StyI	CCWWGG	1 cut(s)	1117
TaaI	ACNGT	3 cut(s)	1236, 1694, 1844
TaiI	ACGT	3 cut(s)	978, 1351, 1656
TaqI	TCGA	6 cut(s)	316, 651, 1191, 1212, 1409, 1750
TatI	WGTACW	1 cut(s)	1727
TauI	GCSGC	2 cut(s)	143, 927
TfiI	GAWTC	2 cut(s)	159, 1188
Tru1I	TTAA	4 cut(s)	1164, 1607, 1721, 1758
Tru9I	TTAA	4 cut(s)	1164, 1607, 1721, 1758
TscAI	CASTG	2 cut(s)	1006, 1699
TseFI	GTSAC	2 cut(s)	781, 1784
TseI	GCWGC	2 cut(s)	143, 635
Tsp45I	GTSAC	2 cut(s)	781, 1784
TspDTI	ATGAA	7 cut(s)	17, 97, 407, 507, 1481, 1517, 1545
TspGWI	ACGGA	1 cut(s)	734
TspRI	CASTG	2 cut(s)	1006, 1699
VpaK11BI	GGWCC	1 cut(s)	1840
VspI	ATTAAT	1 cut(s)	1164
XapI	RAATTY	4 cut(s)	592, 1532, 1593, 1812
XbaI	TCTAGA	1 cut(s)	383
XceI	RCATGY	4 cut(s)	69, 101, 614, 1417
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1865
XspI	CTAG	6 cut(s)	384, 528, 947, 1037, 1077, 1185
Zsp2I	ATGCAT	2 cut(s)	1017, 1423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.