Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0013442

Physical Location & Seq

Genomic Coordinates Reverse (-)

30746349 .. 30748337

Gene Structure 1989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1179700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGAAGATACTGTGTTATCCAAATCCCACAGAGCTGAGAGCTCAAACTCTTTCCCCTTCACCAAACATTCCCAGCTCCGCCATGACCTCCACTGTCTGCATCCCCACAACTCCACCGTCCTCTCACCCATCTTCTCTCTTCCCACAAATCACATCATGCAAAACCATCAGAGACCTGCGCCAAGTCCACGCCCACTTTATCAAAACCCGCCAAATCCACGACCCCCTCGCCGCCGCCGAAATCCTCCGCTTCTACGCCCTCTCGACCCACCGCAGTATCCAATGCGCCCGTTCTGTTTTCACCCAGATGGAGAAACCCAATTACTTTTCCTGGAACACAATCATCAGAGCTCTCGCAGAGAGCTCTGTTAACGACCACTCGCTCGATGCCCTCTTCTTCTTTTCTCAAATGGTTGCTGATGGTTCTGTGGGACCCAATAAGTTCACCTTCCCTTCAGTGCTGAAAGCCTGTGCAAAAATGGGGAATCTTGAGGTGGGTAAGTGTGTTCATGGCATGGCTGTGAAGTTTGGATTGGAAAGTGATGGGTTTGTTGTGAGCAATCTGGTGAGGATGTATGTAATGTGTGAGGTTATGGAGGATGCAAATTTGTTGTTTTCTAGGAGTGTTGGGGATTTTGGTGTTTTGAATGGGAGGAAGCAAGAGGGCAATGTGGTTTTGTGGAATGTGATTGTTGATGGGTACGTGAGAGTTGGGGATTTTAGAGCTGCAAGGGAGCTGTTTGATAAAATGCCTCACAGAAGTGTGGTGTCCTGGAATGCGATGATATCCGGGTACGCGCAAAACGGGTTTTTTAAGGAGGCTGTGGAAATGTTCCGGGATATGCAGATTGGGAATGTGTGTCCAAATTATGTGACTTTGGTTAGTGTCTTGCCAGCGATATCACGGCTTGGTGCACTTGAACTAGGGAAGTGGATACATTTGTATGCCAACAAGAATGGAATCGGGATTGATGATGTGCTTGGTTCTGCTTTGGTGGATATGTACAGTAAGTGTGGGAGCTTTGAGAAGGCACTCGTAGTTTTTGAGCAACTGCCTAAAAGGAATGTGATAACTTGGAATGCTATAATTAGTGGACTTGCTATGCACGGTCGTGTTGAGGATGCACTAGATTATTTTTCGAAGATGGAACGAGCTGGTGTGGTGCCTAGTGATGTAACATACATTGGTATCTTGAGTGCTTGTAGCCATGCCGGTTTGGTGGAGAAGGGGAGATCATTCTTCAACCATATGGTTAATGTAGTCGGCTTAGAACCTAGAATCGAGCATTATGGTTGTATGGTTGATTTATTAGGTCGTGCCGGATTGTTAGAAGAAGCCGAAGAGCTTATACTGAACATGCCAATTCAGCCAGATGATGTTACATGGAAGGCGCTACTCGGTGCTTGCAAGATGCAAGGGAACATCGATATGGGTAAACGTGTGGCAGAGATTTTAATGGACTTGGCTCCTCGTGATAGTGGATCCTACATTGCTCTCTCGAACATGTATGCTTCTTTGGGAAATTGGGAGGAAGTAGCAAAGGTGAGATTGCGGATGAAAGATATGGACATTCGGAAAGACCCGGGAGGTAGTTCGATTGAGCTTGATGGAGCAATTCACGAGTTTGTGGTGGAAGACGAATCTCATCCTAGAGCCGGAGAAATCCATTCAATGTTGGAGGAAATTTCCGAAAAACTGAGCTTGGAAGGCCATAGGCCTAACACCACACAAGTGTTGCTCAACATGGATGAAGAAGAAAAACAAAGTGCTTTACGTTATCACAGCGAAAAGATTGCAACTGCCTGTGGCTTAATCAGTACAGCCGCTCAAACCACACTTCGAATTGTTAAGAATCTACGCATATGTGAAGATTGTCACTCTTCGATAAAGTTGATCTCGAAAATTTATAAACGCAAGATTGTTGTCAGGGATCGCAAGCGCTTCCACCACTTCGAAAATGGTTTATGCTCTTGCAAGGATTACTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

663

Amino Acids

73.85

Weight (kDa)

6.73

Isoelectric Point (pI)

45.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	223 - 255	6e-06	PPR repeat family
PPR_2	PF13041	254 - 296	1.8e-09	PPR repeat family
PPR_1	PF12854	254 - 282	3.3e-06	PPR repeat
PPR	PF01535	256 - 282	3.3e-09	PPR repeat
PPR_1	PF12854	353 - 383	2.6e-06	PPR repeat
PPR_2	PF13041	354 - 402	9.9e-13	PPR repeat family
PPR	PF01535	357 - 387	5.3e-08	PPR repeat
E_motif	PF20431	474 - 534	4.6e-16	E motif
DYW_deaminase	PF14432	570 - 662	1.6e-38	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013442)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48910
fragaria_vesca	FvH4_2g19560 FvH4_2g19570
malus_domestica	MD05G1179700.v1.1 MD10G1169300.v1.1
prunus_persica	Prupe.6G095600_v2.0.a1 Prupe.8G207000_v2.0.a1
pyrus_communis	pycom05g16620 pycom10g14610
rosa_chinensis	RchiOBHm_Chr6g0285331
rosa_laevigata	RLG00000012653
rosa_multiflora	Rmu_sc0011958.1_g000003
rosa_roxburghii	Rroxscaffold_7G00183350
rosa_rugosa	Rorug06G0173600
rosa_samantha	Rh6AG284300 Rh6BG285100 Rh6DG279600
rosa_wichuraiana	Rw6G024470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1908
Acc36I	ACCTGC	1 cut(s)	183
AccB1I	GGYRCC	1 cut(s)	1162
AccBSI	CCGCTC	1 cut(s)	1826
AccII	CGCG	1 cut(s)	797
AciI	CCGC	8 cut(s)	78, 208, 231, 234, 247, 271, 1552, 1824
AclWI	GGATC	3 cut(s)	1476, 1489, 1938
AcsI	RAATTY	3 cut(s)	604, 1683, 1902
AcuI	CTGAAG	1 cut(s)	438
AfaI	GTAC	4 cut(s)	701, 794, 1004, 1819
AfeI	AGCGCT	1 cut(s)	1940
AfiI	CCNNNNNNNGG	1 cut(s)	1655
AflIII	ACRYGT	2 cut(s)	1438, 1503
AgsI	TTSAA	4 cut(s)	646, 920, 1243, 1671
AjnI	CCWGG	2 cut(s)	329, 770
AjuI	GAANNNNNNNTTGG	2 cut(s)	515, 547
AleI	CACNNNNGTG	3 cut(s)	759, 1110, 1730
Alw21I	GWGCWC	4 cut(s)	43, 352, 365, 916
Alw26I	GTCTC	1 cut(s)	165
Alw44I	GTGCAC	1 cut(s)	912
AlwI	GGATC	3 cut(s)	1476, 1489, 1938
Ama87I	CYCGRG	1 cut(s)	1582
Aor51HI	AGCGCT	1 cut(s)	1940
AoxI	GGCC	2 cut(s)	1708, 1715
ApaLI	GTGCAC	1 cut(s)	912
ApeKI	GCWGC	1 cut(s)	725
ApoI	RAATTY	3 cut(s)	604, 1683, 1902
AspLEI	GCGC	5 cut(s)	180, 287, 799, 1393, 1941
AspS9I	GGNCC	1 cut(s)	431
AsuC2I	CCSGG	4 cut(s)	790, 836, 1583, 1584
AsuHPI	GGTGA	6 cut(s)	51, 116, 292, 436, 577, 1555
AsuII	TTCGAA	3 cut(s)	1139, 1840, 1953
AvaI	CYCGRG	1 cut(s)	1582
AvaII	GGWCC	1 cut(s)	431
BaeGI	GKGCMC	1 cut(s)	916
BaeI	ACNNNNGTAYC	6 cut(s)	259, 292, 926, 959, 1171, 1204
BamHI	GGATCC	1 cut(s)	1481
BanI	GGYRCC	1 cut(s)	1162
BanII	GRGCYC	3 cut(s)	43, 352, 365
BarI	GAAGNNNNNNTAC	2 cut(s)	1332, 1364
BauI	CACGAG	2 cut(s)	1470, 1619
BbsI	GAAGAC	1 cut(s)	1641
Bbv12I	GWGCWC	4 cut(s)	43, 352, 365, 916
BbvI	GCAGC	1 cut(s)	712
BccI	CCATC	8 cut(s)	136, 173, 301, 413, 536, 689, 1138, 1601
BceAI	ACGGC	1 cut(s)	920
BcgI	CGANNNNNNTGC	2 cut(s)	1775, 1809
BciT130I	CCWGG	2 cut(s)	331, 772
BciVI	GTATCC	2 cut(s)	287, 927
BcnI	CCSGG	4 cut(s)	790, 836, 1583, 1584
BcoDI	GTCTC	1 cut(s)	165
BfaI	CTAG	6 cut(s)	618, 923, 1127, 1167, 1275, 1650
BfoI	RGCGCY	2 cut(s)	1394, 1942
BfuAI	ACCTGC	1 cut(s)	183
BfuI	GTATCC	2 cut(s)	287, 927
BisI	GCNGC	4 cut(s)	231, 234, 726, 1824
BlsI	GCNGC	4 cut(s)	232, 235, 727, 1825
Bme1390I	CCNGG	6 cut(s)	331, 772, 790, 836, 1583, 1584
Bme18I	GGWCC	1 cut(s)	431
BmeT110I	CYCGRG	1 cut(s)	1582
BmgT120I	GGNCC	1 cut(s)	431
BmiI	GGNNCC	5 cut(s)	432, 433, 1164, 1467, 1483
BmrFI	CCNGG	6 cut(s)	331, 772, 790, 836, 1583, 1584
BmsI	GCATC	5 cut(s)	108, 376, 589, 1111, 1401
BpiI	GAAGAC	1 cut(s)	1641
Bpu14I	TTCGAA	3 cut(s)	1139, 1840, 1953
BpuEI	CTTGAG	2 cut(s)	509, 1213
BpuMI	CCSGG	4 cut(s)	790, 836, 1583, 1584
Bsa29I	ATCGAT	1 cut(s)	1425
BsaAI	YACGTR	1 cut(s)	703
BsaI	GGTCTC	1 cut(s)	165
BsaJI	CCNNGG	1 cut(s)	1582
Bsc4I	CCNNNNNNNGG	1 cut(s)	1655
Bse118I	RCCGGY	1 cut(s)	1211
Bse1I	ACTGG	1 cut(s)	1988
Bse3DI	GCAATG	2 cut(s)	673, 1488
BseBI	CCWGG	2 cut(s)	331, 772
BseCI	ATCGAT	1 cut(s)	1425
BseDI	CCNNGG	1 cut(s)	1582
BseGI	GGATG	7 cut(s)	99, 576, 604, 1126, 1560, 1645, 1753
BseLI	CCNNNNNNNGG	1 cut(s)	1655
BseMI	GCAATG	2 cut(s)	673, 1488
BseMII	CTCAG	2 cut(s)	26, 1688
BseNI	ACTGG	1 cut(s)	1988
BseRI	GAGGAG	1 cut(s)	1458
BseSI	GKGCMC	1 cut(s)	916
BseXI	GCAGC	1 cut(s)	712
BseYI	CCCAGC	1 cut(s)	71
Bsh1236I	CGCG	1 cut(s)	797
Bsh1285I	CGRYCG	1 cut(s)	1111
BshFI	GGCC	2 cut(s)	1710, 1717
BshNI	GGYRCC	1 cut(s)	1162
BshVI	ATCGAT	1 cut(s)	1425
BsiEI	CGRYCG	1 cut(s)	1111
BsiHKAI	GWGCWC	4 cut(s)	43, 352, 365, 916
BsiHKCI	CYCGRG	1 cut(s)	1582
BsiSI	CCGG	6 cut(s)	789, 835, 1212, 1320, 1583, 1656
BslFI	GGGAC	1 cut(s)	444
BslI	CCNNNNNNNGG	1 cut(s)	1655
BsmAI	GTCTC	1 cut(s)	165
BsmFI	GGGAC	1 cut(s)	444
BsmI	GAATGC	2 cut(s)	781, 1084
BsnI	GGCC	2 cut(s)	1710, 1717
Bso31I	GGTCTC	1 cut(s)	165
BsoBI	CYCGRG	1 cut(s)	1582
Bsp119I	TTCGAA	3 cut(s)	1139, 1840, 1953
Bsp1286I	GDGCHC	4 cut(s)	43, 352, 365, 916
Bsp1407I	TGTACA	1 cut(s)	1002
Bsp143I	GATC	4 cut(s)	1232, 1481, 1893, 1930
BspACI	CCGC	8 cut(s)	78, 208, 231, 234, 247, 271, 1552, 1824
BspANI	GGCC	2 cut(s)	1710, 1717
BspCNI	CTCAG	2 cut(s)	27, 1689
BspDI	ATCGAT	1 cut(s)	1425
BspFNI	CGCG	1 cut(s)	797
BspLI	GGNNCC	5 cut(s)	432, 433, 1164, 1467, 1483
BspMI	ACCTGC	1 cut(s)	183
BspPI	GGATC	3 cut(s)	1476, 1489, 1938
BspQI	GCTCTTC	1 cut(s)	1335
BspT104I	TTCGAA	3 cut(s)	1139, 1840, 1953
BspT107I	GGYRCC	1 cut(s)	1162
BspTNI	GGTCTC	1 cut(s)	165
BsrBI	CCGCTC	1 cut(s)	1826
BsrDI	GCAATG	2 cut(s)	673, 1488
BsrFI	RCCGGY	1 cut(s)	1211
BsrGI	TGTACA	1 cut(s)	1002
BsrI	ACTGG	1 cut(s)	1988
BssAI	RCCGGY	1 cut(s)	1211
BssECI	CCNNGG	1 cut(s)	1582
BssMI	GATC	4 cut(s)	1232, 1481, 1893, 1930
BssSI	CACGAG	2 cut(s)	1470, 1619
Bst2BI	CACGAG	2 cut(s)	1470, 1619
Bst2UI	CCWGG	2 cut(s)	331, 772
Bst4CI	ACNGT	5 cut(s)	12, 94, 117, 1007, 1109
Bst6I	CTCTTC	4 cut(s)	143, 398, 1335, 1885
BstAUI	TGTACA	1 cut(s)	1002
BstBAI	YACGTR	1 cut(s)	703
BstBI	TTCGAA	3 cut(s)	1139, 1840, 1953
BstC8I	GCNNGC	3 cut(s)	894, 1405, 1937
BstDEI	CTNAG	3 cut(s)	35, 1267, 1697
BstF5I	GGATG	7 cut(s)	99, 576, 604, 1126, 1560, 1645, 1753
BstFNI	CGCG	1 cut(s)	797
BstH2I	RGCGCY	2 cut(s)	1394, 1942
BstHHI	GCGC	5 cut(s)	180, 287, 799, 1393, 1941
BstKTI	GATC	4 cut(s)	1235, 1484, 1896, 1933
BstMAI	GTCTC	1 cut(s)	165
BstMBI	GATC	4 cut(s)	1232, 1481, 1893, 1930
BstMCI	CGRYCG	1 cut(s)	1111
BstMWI	GCNNNNNNNGC	2 cut(s)	1366, 1707
BstNI	CCWGG	2 cut(s)	331, 772
BstNSI	RCATGY	2 cut(s)	1360, 1507
BstSCI	CCNGG	6 cut(s)	329, 770, 788, 834, 1581, 1582
BstSLI	GKGCMC	1 cut(s)	916
BstUI	CGCG	1 cut(s)	797
BstV1I	GCAGC	1 cut(s)	712
BstV2I	GAAGAC	1 cut(s)	1641
BstX2I	RGATCY	1 cut(s)	1481
BstYI	RGATCY	1 cut(s)	1481
Bsu15I	ATCGAT	1 cut(s)	1425
BsuI	GTATCC	2 cut(s)	287, 927
BsuRI	GGCC	2 cut(s)	1710, 1717
BsuTUI	ATCGAT	1 cut(s)	1425
BtgZI	GCGATG	1 cut(s)	794
BtsCI	GGATG	7 cut(s)	99, 576, 604, 1126, 1560, 1645, 1753
BtsIMutI	CAGTG	2 cut(s)	90, 462
BveI	ACCTGC	1 cut(s)	183
Cac8I	GCNNGC	3 cut(s)	894, 1405, 1937
CfoI	GCGC	5 cut(s)	180, 287, 799, 1393, 1941
Cfr10I	RCCGGY	1 cut(s)	1211
Cfr13I	GGNCC	1 cut(s)	431
Cfr9I	CCCGGG	1 cut(s)	1582
ClaI	ATCGAT	1 cut(s)	1425
Csp6I	GTAC	4 cut(s)	700, 793, 1003, 1818
CviAII	CATG	9 cut(s)	82, 156, 509, 514, 1208, 1357, 1383, 1504, 1744
CviQI	GTAC	4 cut(s)	700, 793, 1003, 1818
DdeI	CTNAG	3 cut(s)	35, 1267, 1697
DpnI	GATC	4 cut(s)	1234, 1483, 1895, 1932
DpnII	GATC	4 cut(s)	1232, 1481, 1893, 1930
Eam1104I	CTCTTC	4 cut(s)	143, 398, 1335, 1885
EarI	CTCTTC	4 cut(s)	143, 398, 1335, 1885
EciI	GGCGGA	1 cut(s)	67
Ecl136II	GAGCTC	3 cut(s)	41, 350, 363
Eco147I	AGGCCT	1 cut(s)	1717
Eco24I	GRGCYC	3 cut(s)	43, 352, 365
Eco31I	GGTCTC	1 cut(s)	165
Eco32I	GATATC	2 cut(s)	786, 900
Eco47I	GGWCC	1 cut(s)	431
Eco47III	AGCGCT	1 cut(s)	1940
Eco53kI	GAGCTC	3 cut(s)	41, 350, 363
Eco57I	CTGAAG	1 cut(s)	438
Eco88I	CYCGRG	1 cut(s)	1582
EcoICRI	GAGCTC	3 cut(s)	41, 350, 363
EcoO109I	RGGNCCY	1 cut(s)	431
EcoRII	CCWGG	2 cut(s)	329, 770
EcoRV	GATATC	2 cut(s)	786, 900
EcoT38I	GRGCYC	3 cut(s)	43, 352, 365
FaeI	CATG	9 cut(s)	85, 159, 512, 517, 1211, 1360, 1386, 1507, 1747
FalI	AAGNNNNNCTT	2 cut(s)	431, 463
FaqI	GGGAC	1 cut(s)	444
FatI	CATG	9 cut(s)	81, 155, 508, 513, 1207, 1356, 1382, 1503, 1743
FauI	CCCGC	1 cut(s)	215
FauNDI	CATATG	2 cut(s)	1248, 1862
Fnu4HI	GCNGC	4 cut(s)	231, 234, 726, 1824
FokI	GGATG	7 cut(s)	86, 583, 611, 1133, 1567, 1632, 1760
FriOI	GRGCYC	3 cut(s)	43, 352, 365
Fsp4HI	GCNGC	4 cut(s)	231, 234, 726, 1824
FspBI	CTAG	6 cut(s)	618, 923, 1127, 1167, 1275, 1650
GlaI	GCGC	5 cut(s)	179, 286, 798, 1392, 1940
GluI	GCNGC	4 cut(s)	231, 234, 726, 1824
GsaI	CCCAGC	1 cut(s)	75
HaeII	RGCGCY	2 cut(s)	1394, 1942
HaeIII	GGCC	2 cut(s)	1710, 1717
HapII	CCGG	6 cut(s)	789, 835, 1212, 1320, 1583, 1656
HhaI	GCGC	5 cut(s)	180, 287, 799, 1393, 1941
Hin1II	CATG	9 cut(s)	85, 159, 512, 517, 1211, 1360, 1386, 1507, 1747
Hin6I	GCGC	5 cut(s)	178, 285, 797, 1391, 1939
HinP1I	GCGC	5 cut(s)	178, 285, 797, 1391, 1939
HincII	GTYRAC	1 cut(s)	370
HindII	GTYRAC	1 cut(s)	370
HinfI	GANTC	5 cut(s)	484, 960, 1278, 1640, 1852
HpaI	GTTAAC	1 cut(s)	370
HpaII	CCGG	6 cut(s)	789, 835, 1212, 1320, 1583, 1656
HphI	GGTGA	6 cut(s)	51, 116, 292, 436, 577, 1555
Hpy166II	GTNNAC	6 cut(s)	187, 370, 444, 914, 1094, 1436
Hpy188I	TCNGA	4 cut(s)	170, 347, 1575, 1690
Hpy188III	TCNNGA	8 cut(s)	262, 488, 964, 1192, 1472, 1498, 1619, 1897
Hpy8I	GTNNAC	6 cut(s)	187, 370, 444, 914, 1094, 1436
HpyAV	CCTTC	7 cut(s)	66, 457, 462, 1021, 1219, 1381, 1700
HpyCH4III	ACNGT	5 cut(s)	12, 94, 117, 1007, 1109
HpyCH4IV	ACGT	3 cut(s)	702, 1438, 1774
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1366, 1707
HpyF3I	CTNAG	3 cut(s)	35, 1267, 1697
HpySE526I	ACGT	3 cut(s)	702, 1438, 1774
Hsp92II	CATG	9 cut(s)	85, 159, 512, 517, 1211, 1360, 1386, 1507, 1747
HspAI	GCGC	5 cut(s)	178, 285, 797, 1391, 1939
KflI	GGGWCCC	1 cut(s)	431
KspAI	GTTAAC	1 cut(s)	370
Kzo9I	GATC	4 cut(s)	1232, 1481, 1893, 1930
LguI	GCTCTTC	1 cut(s)	1335
LmnI	GCTCC	5 cut(s)	80, 733, 1017, 1471, 1610
Lsp1109I	GCAGC	1 cut(s)	712
LweI	GCATC	5 cut(s)	108, 376, 589, 1111, 1401
MaeI	CTAG	6 cut(s)	618, 923, 1127, 1167, 1275, 1650
MaeII	ACGT	3 cut(s)	702, 1438, 1774
MaeIII	GTNAC	4 cut(s)	871, 1174, 1378, 1874
MalI	GATC	4 cut(s)	1234, 1483, 1895, 1932
MbiI	CCGCTC	1 cut(s)	1826
MboI	GATC	4 cut(s)	1232, 1481, 1893, 1930
MflI	RGATCY	1 cut(s)	1481
MhlI	GDGCHC	4 cut(s)	43, 352, 365, 916
MmeI	TCCRAC	1 cut(s)	1656
MseI	TTAA	6 cut(s)	369, 813, 1254, 1454, 1811, 1848
MslI	CAYNNNNRTG	7 cut(s)	305, 518, 759, 942, 1110, 1427, 1730
MspI	CCGG	6 cut(s)	789, 835, 1212, 1320, 1583, 1656
MspR9I	CCNGG	6 cut(s)	331, 772, 790, 836, 1583, 1584
Mva1269I	GAATGC	2 cut(s)	781, 1084
MvaI	CCWGG	2 cut(s)	331, 772
MvnI	CGCG	1 cut(s)	797
MwoI	GCNNNNNNNGC	2 cut(s)	1366, 1707
NciI	CCSGG	4 cut(s)	790, 836, 1583, 1584
NdeI	CATATG	2 cut(s)	1248, 1862
NdeII	GATC	4 cut(s)	1232, 1481, 1893, 1930
NlaIII	CATG	9 cut(s)	85, 159, 512, 517, 1211, 1360, 1386, 1507, 1747
NlaIV	GGNNCC	5 cut(s)	432, 433, 1164, 1467, 1483
NmuCI	GTSAC	2 cut(s)	871, 1874
NspI	RCATGY	2 cut(s)	1360, 1507
NspV	TTCGAA	3 cut(s)	1139, 1840, 1953
OliI	CACNNNNGTG	3 cut(s)	759, 1110, 1730
PceI	AGGCCT	1 cut(s)	1717
PciI	ACATGT	1 cut(s)	1503
PciSI	GCTCTTC	1 cut(s)	1335
PcsI	WCGNNNNNNNCGW	1 cut(s)	234
PctI	GAATGC	2 cut(s)	781, 1084
PfeI	GAWTC	5 cut(s)	484, 960, 1278, 1640, 1852
PfoI	TCCNGGA	3 cut(s)	329, 770, 834
PkrI	GCNGC	4 cut(s)	232, 235, 727, 1825
Ppu21I	YACGTR	1 cut(s)	703
PpuMI	RGGWCCY	1 cut(s)	431
PscI	ACATGT	1 cut(s)	1503
PsiI	TTATAA	1 cut(s)	1908
Psp124BI	GAGCTC	3 cut(s)	43, 352, 365
Psp5II	RGGWCCY	1 cut(s)	431
Psp6I	CCWGG	2 cut(s)	329, 770
PspFI	CCCAGC	1 cut(s)	71
PspGI	CCWGG	2 cut(s)	329, 770
PspN4I	GGNNCC	5 cut(s)	432, 433, 1164, 1467, 1483
PspPI	GGNCC	1 cut(s)	431
PspPPI	RGGWCCY	1 cut(s)	431
PsuI	RGATCY	1 cut(s)	1481
RsaI	GTAC	4 cut(s)	701, 794, 1004, 1819
RsaNI	GTAC	4 cut(s)	700, 793, 1003, 1818
RseI	CAYNNNNRTG	7 cut(s)	305, 518, 759, 942, 1110, 1427, 1730
SacI	GAGCTC	3 cut(s)	43, 352, 365
SapI	GCTCTTC	1 cut(s)	1335
SaqAI	TTAA	6 cut(s)	369, 813, 1254, 1454, 1811, 1848
SatI	GCNGC	4 cut(s)	231, 234, 726, 1824
Sau3AI	GATC	4 cut(s)	1232, 1481, 1893, 1930
Sau96I	GGNCC	1 cut(s)	431
ScrFI	CCNGG	6 cut(s)	331, 772, 790, 836, 1583, 1584
SduI	GDGCHC	4 cut(s)	43, 352, 365, 916
SfaNI	GCATC	5 cut(s)	108, 376, 589, 1111, 1401
SfuI	TTCGAA	3 cut(s)	1139, 1840, 1953
SinI	GGWCC	1 cut(s)	431
SmaI	CCCGGG	1 cut(s)	1584
SmiMI	CAYNNNNRTG	7 cut(s)	305, 518, 759, 942, 1110, 1427, 1730
SmlI	CTYRAG	2 cut(s)	488, 1192
SmoI	CTYRAG	2 cut(s)	488, 1192
SseBI	AGGCCT	1 cut(s)	1717
SsiI	CCGC	8 cut(s)	78, 208, 231, 234, 247, 271, 1552, 1824
SspMI	CTAG	6 cut(s)	618, 923, 1127, 1167, 1275, 1650
SstI	GAGCTC	3 cut(s)	43, 352, 365
StuI	AGGCCT	1 cut(s)	1717
StyD4I	CCNGG	6 cut(s)	329, 770, 788, 834, 1581, 1582
TaaI	ACNGT	5 cut(s)	12, 94, 117, 1007, 1109
TaiI	ACGT	3 cut(s)	705, 1441, 1777
TatI	WGTACW	2 cut(s)	1002, 1817
TauI	GCSGC	3 cut(s)	233, 236, 1826
TfiI	GAWTC	5 cut(s)	484, 960, 1278, 1640, 1852
Tru1I	TTAA	6 cut(s)	369, 813, 1254, 1454, 1811, 1848
Tru9I	TTAA	6 cut(s)	369, 813, 1254, 1454, 1811, 1848
TscAI	CASTG	2 cut(s)	97, 462
TseFI	GTSAC	2 cut(s)	871, 1874
TseI	GCWGC	1 cut(s)	725
Tsp45I	GTSAC	2 cut(s)	871, 1874
TspDTI	ATGAA	4 cut(s)	17, 497, 1571, 1764
TspMI	CCCGGG	1 cut(s)	1582
TspRI	CASTG	2 cut(s)	97, 462
VneI	GTGCAC	1 cut(s)	912
VpaK11BI	GGWCC	1 cut(s)	431
XapI	RAATTY	3 cut(s)	604, 1683, 1902
XceI	RCATGY	2 cut(s)	1360, 1507
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1955
XmaI	CCCGGG	1 cut(s)	1582
XspI	CTAG	6 cut(s)	618, 923, 1127, 1167, 1275, 1650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.