gamete expressed
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 |
| fragaria_vesca | FvH4_4g18570 |
| prunus_persica | Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1 |
| pyrus_communis | pycom16g14000 pycom16g14010 |
| rosa_chinensis | RchiOBHm_Chr4g0423171 |
| rosa_laevigata | RLG00000007579 |
| rosa_multiflora | Rmu_sc0000744.1_g000001 Rmu_sc0008829.1_g000002 Rmu_sc0020601.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00365330 |
| rosa_rugosa | Rorug04G0184800 Rorug04G0184900 |
| rosa_samantha | Rh4AG244300 Rh4AG244400 Rh4BG249500 Rh4BG249600 Rh4CG258600 Rh4CG258700 Rh4DG244300 Rh4DG244400 |
| rosa_wichuraiana | Rw4G021050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2345 |
| AarI | CACCTGC | 1 cut(s) | 1142 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 586 |
| Acc36I | ACCTGC | 2 cut(s) | 1142, 1848 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1595 |
| AccI | GTMKAC | 3 cut(s) | 734, 1716, 2072 |
| AccII | CGCG | 2 cut(s) | 2502, 2613 |
| AciI | CCGC | 6 cut(s) | 1005, 1704, 1764, 2007, 2502, 2519 |
| AclWI | GGATC | 8 cut(s) | 769, 797, 970, 1484, 1888, 2099, 2234, 2450 |
| AcoI | YGGCCR | 1 cut(s) | 1374 |
| AcuI | CTGAAG | 5 cut(s) | 866, 999, 1800, 1997, 2381 |
| AcvI | CACGTG | 1 cut(s) | 2422 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1595, 1802, 1928 |
| AflIII | ACRYGT | 1 cut(s) | 2419 |
| AgeI | ACCGGT | 1 cut(s) | 595 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 884 |
| AjnI | CCWGG | 5 cut(s) | 628, 664, 1588, 1818, 1921 |
| Alw26I | GTCTC | 6 cut(s) | 246, 572, 819, 1899, 2208, 2626 |
| AlwI | GGATC | 8 cut(s) | 769, 797, 970, 1484, 1888, 2099, 2234, 2450 |
| AoxI | GGCC | 3 cut(s) | 1123, 1374, 1816 |
| ApeKI | GCWGC | 6 cut(s) | 977, 1169, 1706, 2386, 2405, 2491 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2318, 2350 |
| AseI | ATTAAT | 1 cut(s) | 2148 |
| AsiGI | ACCGGT | 1 cut(s) | 595 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1012 |
| AspS9I | GGNCC | 3 cut(s) | 395, 422, 886 |
| AsuC2I | CCSGG | 3 cut(s) | 145, 208, 2262 |
| AsuHPI | GGTGA | 9 cut(s) | 424, 643, 852, 962, 1166, 1288, 1967, 2195, 2279 |
| AvaII | GGWCC | 3 cut(s) | 395, 422, 886 |
| BalI | TGGCCA | 1 cut(s) | 1376 |
| BanII | GRGCYC | 1 cut(s) | 2656 |
| BbrPI | CACGTG | 1 cut(s) | 2422 |
| BbvCI | CCTCAGC | 1 cut(s) | 1300 |
| BbvI | GCAGC | 6 cut(s) | 964, 1181, 1718, 2392, 2398, 2478 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 539, 573, 1532, 1566, 1888, 1922, 1998, 2032 |
| BciT130I | CCWGG | 5 cut(s) | 630, 666, 1590, 1820, 1923 |
| BciVI | GTATCC | 1 cut(s) | 1460 |
| BcnI | CCSGG | 3 cut(s) | 145, 208, 2262 |
| BcoDI | GTCTC | 6 cut(s) | 246, 572, 819, 1899, 2208, 2626 |
| BfaI | CTAG | 5 cut(s) | 717, 899, 1025, 1797, 2436 |
| BfmI | CTRYAG | 1 cut(s) | 1710 |
| BfuAI | ACCTGC | 2 cut(s) | 1142, 1848 |
| BfuI | GTATCC | 1 cut(s) | 1460 |
| BglII | AGATCT | 3 cut(s) | 498, 1783, 2245 |
| BisI | GCNGC | 7 cut(s) | 978, 1170, 1704, 1707, 2387, 2406, 2492 |
| BlsI | GCNGC | 7 cut(s) | 979, 1171, 1705, 1708, 2388, 2407, 2493 |
| Bme1390I | CCNGG | 8 cut(s) | 145, 208, 630, 666, 1590, 1820, 1923, 2262 |
| Bme18I | GGWCC | 3 cut(s) | 395, 422, 886 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 884 |
| BmgT120I | GGNCC | 3 cut(s) | 395, 422, 886 |
| BmiI | GGNNCC | 2 cut(s) | 2653, 2688 |
| BmrFI | CCNGG | 8 cut(s) | 145, 208, 630, 666, 1590, 1820, 1923, 2262 |
| BmsI | GCATC | 5 cut(s) | 169, 547, 720, 832, 1896 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 933, 965, 1283, 1315 |
| BpmI | CTGGAG | 3 cut(s) | 1841, 1865, 2192 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1300 |
| BpuEI | CTTGAG | 3 cut(s) | 428, 1017, 2659 |
| BpuMI | CCSGG | 3 cut(s) | 145, 208, 2262 |
| BsaAI | YACGTR | 1 cut(s) | 2422 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2244 |
| BsaI | GGTCTC | 1 cut(s) | 2626 |
| BsaJI | CCNNGG | 6 cut(s) | 629, 1377, 2260, 2295, 2647, 2656 |
| BsaWI | WCCGGW | 2 cut(s) | 595, 2110 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 488, 518, 1045, 1075, 1723, 1753, 2478, 2508 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1595, 1802, 1928 |
| Bse118I | RCCGGY | 1 cut(s) | 595 |
| Bse1I | ACTGG | 7 cut(s) | 610, 863, 964, 1078, 1366, 1493, 1539 |
| Bse3DI | GCAATG | 3 cut(s) | 1468, 1954, 2474 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2244 |
| BseBI | CCWGG | 5 cut(s) | 630, 666, 1590, 1820, 1923 |
| BseDI | CCNNGG | 6 cut(s) | 629, 1377, 2260, 2295, 2647, 2656 |
| BseGI | GGATG | 6 cut(s) | 123, 153, 184, 436, 1249, 2110 |
| BseJI | GATNNNNATC | 1 cut(s) | 2244 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1595, 1802, 1928 |
| BseMI | GCAATG | 3 cut(s) | 1468, 1954, 2474 |
| BseMII | CTCAG | 7 cut(s) | 1314, 1598, 1757, 1848, 1953, 2244, 2528 |
| BseNI | ACTGG | 7 cut(s) | 610, 863, 964, 1078, 1366, 1493, 1539 |
| BseRI | GAGGAG | 4 cut(s) | 47, 1728, 1731, 2520 |
| BseXI | GCAGC | 6 cut(s) | 964, 1181, 1718, 2392, 2398, 2478 |
| BseYI | CCCAGC | 1 cut(s) | 806 |
| Bsh1236I | CGCG | 2 cut(s) | 2502, 2613 |
| BshFI | GGCC | 3 cut(s) | 1125, 1376, 1818 |
| BshTI | ACCGGT | 1 cut(s) | 595 |
| BsiSI | CCGG | 5 cut(s) | 144, 207, 596, 2111, 2262 |
| BslFI | GGGAC | 2 cut(s) | 970, 1366 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1595, 1802, 1928 |
| BsmAI | GTCTC | 6 cut(s) | 246, 572, 819, 1899, 2208, 2626 |
| BsmBI | CGTCTC | 1 cut(s) | 572 |
| BsmFI | GGGAC | 2 cut(s) | 970, 1366 |
| BsmI | GAATGC | 2 cut(s) | 157, 182 |
| BsnI | GGCC | 3 cut(s) | 1125, 1376, 1818 |
| Bso31I | GGTCTC | 1 cut(s) | 2626 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2656 |
| Bsp19I | CCATGG | 1 cut(s) | 1377 |
| BspACI | CCGC | 6 cut(s) | 1005, 1704, 1764, 2007, 2502, 2519 |
| BspANI | GGCC | 3 cut(s) | 1125, 1376, 1818 |
| BspCNI | CTCAG | 7 cut(s) | 1313, 1599, 1756, 1847, 1952, 2243, 2529 |
| BspFNI | CGCG | 2 cut(s) | 2502, 2613 |
| BspLI | GGNNCC | 2 cut(s) | 2653, 2688 |
| BspMI | ACCTGC | 2 cut(s) | 1142, 1848 |
| BspPI | GGATC | 8 cut(s) | 769, 797, 970, 1484, 1888, 2099, 2234, 2450 |
| BspQI | GCTCTTC | 1 cut(s) | 1003 |
| BspTNI | GGTCTC | 1 cut(s) | 2626 |
| BsrDI | GCAATG | 3 cut(s) | 1468, 1954, 2474 |
| BsrFI | RCCGGY | 1 cut(s) | 595 |
| BsrI | ACTGG | 7 cut(s) | 610, 863, 964, 1078, 1366, 1493, 1539 |
| BssAI | RCCGGY | 1 cut(s) | 595 |
| BssECI | CCNNGG | 6 cut(s) | 629, 1377, 2260, 2295, 2647, 2656 |
| BssNAI | GTATAC | 2 cut(s) | 735, 1717 |
| BssT1I | CCWWGG | 3 cut(s) | 1377, 2295, 2647 |
| Bst1107I | GTATAC | 2 cut(s) | 735, 1717 |
| Bst2UI | CCWGG | 5 cut(s) | 630, 666, 1590, 1820, 1923 |
| Bst4CI | ACNGT | 7 cut(s) | 739, 1266, 1714, 2142, 2334, 2573, 2660 |
| Bst6I | CTCTTC | 5 cut(s) | 1003, 1608, 2067, 2601, 2624 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2491 |
| BstBAI | YACGTR | 1 cut(s) | 2422 |
| BstC8I | GCNNGC | 6 cut(s) | 1127, 1555, 1567, 1571, 1773, 2611 |
| BstDSI | CCRYGG | 2 cut(s) | 1377, 2656 |
| BstF5I | GGATG | 6 cut(s) | 123, 153, 184, 436, 1249, 2110 |
| BstFNI | CGCG | 2 cut(s) | 2502, 2613 |
| BstMAI | GTCTC | 6 cut(s) | 246, 572, 819, 1899, 2208, 2626 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 803, 1815, 2491 |
| BstNI | CCWGG | 5 cut(s) | 630, 666, 1590, 1820, 1923 |
| BstNSI | RCATGY | 1 cut(s) | 1573 |
| BstSCI | CCNGG | 8 cut(s) | 143, 206, 628, 664, 1588, 1818, 1921, 2260 |
| BstSFI | CTRYAG | 1 cut(s) | 1710 |
| BstUI | CGCG | 2 cut(s) | 2502, 2613 |
| BstV1I | GCAGC | 6 cut(s) | 964, 1181, 1718, 2392, 2398, 2478 |
| BstX2I | RGATCY | 4 cut(s) | 498, 1783, 2239, 2245 |
| BstYI | RGATCY | 4 cut(s) | 498, 1783, 2239, 2245 |
| BstZ17I | GTATAC | 2 cut(s) | 735, 1717 |
| BsuI | GTATCC | 1 cut(s) | 1460 |
| BsuRI | GGCC | 3 cut(s) | 1125, 1376, 1818 |
| BtgI | CCRYGG | 2 cut(s) | 1377, 2656 |
| BtgZI | GCGATG | 1 cut(s) | 2483 |
| BtsCI | GGATG | 6 cut(s) | 123, 153, 184, 436, 1249, 2110 |
| BtsI | GCAGTG | 1 cut(s) | 2588 |
| BtsIMutI | CAGTG | 3 cut(s) | 1532, 2304, 2588 |
| BveI | ACCTGC | 2 cut(s) | 1142, 1848 |
| Cac8I | GCNNGC | 6 cut(s) | 1127, 1555, 1567, 1571, 1773, 2611 |
| Cfr10I | RCCGGY | 1 cut(s) | 595 |
| Cfr13I | GGNCC | 3 cut(s) | 395, 422, 886 |
| CseI | GACGC | 1 cut(s) | 144 |
| CsiI | ACCWGGT | 1 cut(s) | 1588 |
| CspAI | ACCGGT | 1 cut(s) | 595 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2419, 2454 |
| CviAII | CATG | 8 cut(s) | 474, 1001, 1326, 1378, 1570, 1595, 2482, 2545 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 586 |
| DriI | GACNNNNNGTC | 1 cut(s) | 884 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 586 |
| EaeI | YGGCCR | 1 cut(s) | 1374 |
| Eam1104I | CTCTTC | 5 cut(s) | 1003, 1608, 2067, 2601, 2624 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 884 |
| EarI | CTCTTC | 5 cut(s) | 1003, 1608, 2067, 2601, 2624 |
| EciI | GGCGGA | 2 cut(s) | 1020, 1779 |
| Eco130I | CCWWGG | 3 cut(s) | 1377, 2295, 2647 |
| Eco24I | GRGCYC | 1 cut(s) | 2656 |
| Eco31I | GGTCTC | 1 cut(s) | 2626 |
| Eco32I | GATATC | 1 cut(s) | 1687 |
| Eco47I | GGWCC | 3 cut(s) | 395, 422, 886 |
| Eco57I | CTGAAG | 5 cut(s) | 866, 999, 1800, 1997, 2381 |
| Eco72I | CACGTG | 1 cut(s) | 2422 |
| EcoRI | GAATTC | 1 cut(s) | 415 |
| EcoRII | CCWGG | 5 cut(s) | 628, 664, 1588, 1818, 1921 |
| EcoRV | GATATC | 1 cut(s) | 1687 |
| EcoT14I | CCWWGG | 3 cut(s) | 1377, 2295, 2647 |
| EcoT22I | ATGCAT | 1 cut(s) | 184 |
| EcoT38I | GRGCYC | 1 cut(s) | 2656 |
| ErhI | CCWWGG | 3 cut(s) | 1377, 2295, 2647 |
| Esp3I | CGTCTC | 1 cut(s) | 572 |
| FaeI | CATG | 8 cut(s) | 477, 1004, 1329, 1381, 1573, 1598, 2485, 2548 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2210, 2242, 2621, 2653 |
| FaqI | GGGAC | 2 cut(s) | 970, 1366 |
| FatI | CATG | 8 cut(s) | 473, 1000, 1325, 1377, 1569, 1594, 2481, 2544 |
| FauI | CCCGC | 1 cut(s) | 2014 |
| FauNDI | CATATG | 1 cut(s) | 727 |
| FblI | GTMKAC | 3 cut(s) | 734, 1716, 2072 |
| Fnu4HI | GCNGC | 7 cut(s) | 978, 1170, 1704, 1707, 2387, 2406, 2492 |
| FokI | GGATG | 6 cut(s) | 130, 160, 191, 443, 1256, 2117 |
| FriOI | GRGCYC | 1 cut(s) | 2656 |
| Fsp4HI | GCNGC | 7 cut(s) | 978, 1170, 1704, 1707, 2387, 2406, 2492 |
| FspBI | CTAG | 5 cut(s) | 717, 899, 1025, 1797, 2436 |
| GluI | GCNGC | 7 cut(s) | 978, 1170, 1704, 1707, 2387, 2406, 2492 |
| GsaI | CCCAGC | 1 cut(s) | 810 |
| GsuI | CTGGAG | 3 cut(s) | 1841, 1865, 2192 |
| HaeIII | GGCC | 3 cut(s) | 1125, 1376, 1818 |
| HapII | CCGG | 5 cut(s) | 144, 207, 596, 2111, 2262 |
| HgaI | GACGC | 1 cut(s) | 144 |
| Hin1II | CATG | 8 cut(s) | 477, 1004, 1329, 1381, 1573, 1598, 2485, 2548 |
| HindIII | AAGCTT | 1 cut(s) | 2711 |
| HpaII | CCGG | 5 cut(s) | 144, 207, 596, 2111, 2262 |
| HphI | GGTGA | 9 cut(s) | 424, 643, 852, 962, 1166, 1288, 1967, 2195, 2279 |
| Hpy166II | GTNNAC | 6 cut(s) | 287, 735, 832, 1717, 2073, 2617 |
| Hpy8I | GTNNAC | 6 cut(s) | 287, 735, 832, 1717, 2073, 2617 |
| Hpy99I | CGWCG | 3 cut(s) | 61, 160, 1448 |
| HpyAV | CCTTC | 5 cut(s) | 169, 364, 1450, 1959, 1976 |
| HpyCH4III | ACNGT | 7 cut(s) | 739, 1266, 1714, 2142, 2334, 2573, 2660 |
| HpyCH4IV | ACGT | 5 cut(s) | 1050, 1446, 2399, 2421, 2663 |
| HpyCH4V | TGCA | 9 cut(s) | 128, 182, 1151, 1404, 1565, 1771, 1909, 2472, 2485 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 803, 1815, 2491 |
| HpySE526I | ACGT | 5 cut(s) | 1050, 1446, 2399, 2421, 2663 |
| Hsp92II | CATG | 8 cut(s) | 477, 1004, 1329, 1381, 1573, 1598, 2485, 2548 |
| LguI | GCTCTTC | 1 cut(s) | 1003 |
| LmnI | GCTCC | 4 cut(s) | 66, 1741, 2499, 2651 |
| Lsp1109I | GCAGC | 6 cut(s) | 964, 1181, 1718, 2392, 2398, 2478 |
| LweI | GCATC | 5 cut(s) | 169, 547, 720, 832, 1896 |
| MabI | ACCWGGT | 1 cut(s) | 1588 |
| MaeI | CTAG | 5 cut(s) | 717, 899, 1025, 1797, 2436 |
| MaeII | ACGT | 5 cut(s) | 1050, 1446, 2399, 2421, 2663 |
| MfeI | CAATTG | 1 cut(s) | 439 |
| MflI | RGATCY | 4 cut(s) | 498, 1783, 2239, 2245 |
| MhlI | GDGCHC | 1 cut(s) | 2656 |
| MlsI | TGGCCA | 1 cut(s) | 1376 |
| MluNI | TGGCCA | 1 cut(s) | 1376 |
| MlyI | GAGTC | 6 cut(s) | 821, 1024, 1177, 1523, 1655, 2198 |
| MmeI | TCCRAC | 2 cut(s) | 1453, 2215 |
| Mox20I | TGGCCA | 1 cut(s) | 1376 |
| Mph1103I | ATGCAT | 1 cut(s) | 184 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1012 |
| MscI | TGGCCA | 1 cut(s) | 1376 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1637, 2103, 2424 |
| Msp20I | TGGCCA | 1 cut(s) | 1376 |
| MspA1I | CMGCKG | 1 cut(s) | 2491 |
| MspI | CCGG | 5 cut(s) | 144, 207, 596, 2111, 2262 |
| MspR9I | CCNGG | 8 cut(s) | 145, 208, 630, 666, 1590, 1820, 1923, 2262 |
| MunI | CAATTG | 1 cut(s) | 439 |
| Mva1269I | GAATGC | 2 cut(s) | 157, 182 |
| MvaI | CCWGG | 5 cut(s) | 630, 666, 1590, 1820, 1923 |
| MvnI | CGCG | 2 cut(s) | 2502, 2613 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 803, 1815, 2491 |
| NciI | CCSGG | 3 cut(s) | 145, 208, 2262 |
| NcoI | CCATGG | 1 cut(s) | 1377 |
| NdeI | CATATG | 1 cut(s) | 727 |
| NlaIII | CATG | 8 cut(s) | 477, 1004, 1329, 1381, 1573, 1598, 2485, 2548 |
| NlaIV | GGNNCC | 2 cut(s) | 2653, 2688 |
| NmuCI | GTSAC | 7 cut(s) | 968, 1027, 1180, 1266, 2190, 2302, 2540 |
| NsiI | ATGCAT | 1 cut(s) | 184 |
| NspI | RCATGY | 1 cut(s) | 1573 |
| PaeI | GCATGC | 1 cut(s) | 1573 |
| PaqCI | CACCTGC | 1 cut(s) | 1142 |
| PciSI | GCTCTTC | 1 cut(s) | 1003 |
| PctI | GAATGC | 2 cut(s) | 157, 182 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1012 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1595 |
| PfoI | TCCNGGA | 2 cut(s) | 206, 1921 |
| PinAI | ACCGGT | 1 cut(s) | 595 |
| PkrI | GCNGC | 7 cut(s) | 979, 1171, 1705, 1708, 2388, 2407, 2493 |
| PleI | GAGTC | 6 cut(s) | 820, 1024, 1177, 1522, 1655, 2197 |
| PmaCI | CACGTG | 1 cut(s) | 2422 |
| PmlI | CACGTG | 1 cut(s) | 2422 |
| PpsI | GAGTC | 6 cut(s) | 820, 1024, 1177, 1522, 1655, 2197 |
| Ppu21I | YACGTR | 1 cut(s) | 2422 |
| PshBI | ATTAAT | 1 cut(s) | 2148 |
| PsiI | TTATAA | 1 cut(s) | 2345 |
| Psp6I | CCWGG | 5 cut(s) | 628, 664, 1588, 1818, 1921 |
| PspCI | CACGTG | 1 cut(s) | 2422 |
| PspFI | CCCAGC | 1 cut(s) | 806 |
| PspGI | CCWGG | 5 cut(s) | 628, 664, 1588, 1818, 1921 |
| PspN4I | GGNNCC | 2 cut(s) | 2653, 2688 |
| PspPI | GGNCC | 3 cut(s) | 395, 422, 886 |
| PsuI | RGATCY | 4 cut(s) | 498, 1783, 2239, 2245 |
| PvuII | CAGCTG | 1 cut(s) | 2491 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1637, 2103, 2424 |
| SapI | GCTCTTC | 1 cut(s) | 1003 |
| SatI | GCNGC | 7 cut(s) | 978, 1170, 1704, 1707, 2387, 2406, 2492 |
| Sau96I | GGNCC | 3 cut(s) | 395, 422, 886 |
| SchI | GAGTC | 6 cut(s) | 821, 1024, 1177, 1523, 1655, 2198 |
| ScrFI | CCNGG | 8 cut(s) | 145, 208, 630, 666, 1590, 1820, 1923, 2262 |
| SduI | GDGCHC | 1 cut(s) | 2656 |
| SexAI | ACCWGGT | 1 cut(s) | 1588 |
| SfaNI | GCATC | 5 cut(s) | 169, 547, 720, 832, 1896 |
| SfcI | CTRYAG | 1 cut(s) | 1710 |
| SinI | GGWCC | 3 cut(s) | 395, 422, 886 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1637, 2103, 2424 |
| SmlI | CTYRAG | 3 cut(s) | 407, 1032, 2638 |
| SmoI | CTYRAG | 3 cut(s) | 407, 1032, 2638 |
| SphI | GCATGC | 1 cut(s) | 1573 |
| SsiI | CCGC | 6 cut(s) | 1005, 1704, 1764, 2007, 2502, 2519 |
| SspI | AATATT | 1 cut(s) | 19 |
| SspMI | CTAG | 5 cut(s) | 717, 899, 1025, 1797, 2436 |
| StyD4I | CCNGG | 8 cut(s) | 143, 206, 628, 664, 1588, 1818, 1921, 2260 |
| StyI | CCWWGG | 3 cut(s) | 1377, 2295, 2647 |
| TaaI | ACNGT | 7 cut(s) | 739, 1266, 1714, 2142, 2334, 2573, 2660 |
| TaiI | ACGT | 5 cut(s) | 1053, 1449, 2402, 2424, 2666 |
| TaqI | TCGA | 6 cut(s) | 51, 75, 158, 873, 1443, 2018 |
| TatI | WGTACW | 1 cut(s) | 284 |
| TauI | GCSGC | 1 cut(s) | 1706 |
| TscAI | CASTG | 3 cut(s) | 1539, 2311, 2595 |
| TseFI | GTSAC | 7 cut(s) | 968, 1027, 1180, 1266, 2190, 2302, 2540 |
| TseI | GCWGC | 6 cut(s) | 977, 1169, 1706, 2386, 2405, 2491 |
| Tsp45I | GTSAC | 7 cut(s) | 968, 1027, 1180, 1266, 2190, 2302, 2540 |
| TspDTI | ATGAA | 8 cut(s) | 164, 252, 710, 1123, 1236, 1655, 1743, 2684 |
| TspGWI | ACGGA | 1 cut(s) | 2325 |
| TspRI | CASTG | 3 cut(s) | 1539, 2311, 2595 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1595 |
| VpaK11BI | GGWCC | 3 cut(s) | 395, 422, 886 |
| VspI | ATTAAT | 1 cut(s) | 2148 |
| XceI | RCATGY | 1 cut(s) | 1573 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 386, 1500 |
| XmiI | GTMKAC | 3 cut(s) | 734, 1716, 2072 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1012 |
| XspI | CTAG | 5 cut(s) | 717, 899, 1025, 1797, 2436 |
| Zsp2I | ATGCAT | 1 cut(s) | 184 |