Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0004455

Physical Location & Seq

Genomic Coordinates Reverse (-)

10026620 .. 10029972

Gene Structure 3353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g14010.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGGAGGGGGAGAAAAAGAGAGAACCCAAATATTATATAAACCGTTTTCAACCGTCACCAACCGCTCTAGAAGTATCAAACGGACAAAATTACTTGATCAGCTTCCCTTCGGAAATACAAACTTTGTCTCTGCAGAATTCCAAAACCTCTCGGCTTTCTCTCATGGCAGTCGAAATGCACTTACTCATATCCCTCTTGGCTCTCTCTTTTCGCCTTTCCTTGTTCGAATTTGTTTCAGACGAAGCAGCGATGCCGGAGTTCACTTTCAGTTGGATGGATGACAATGACACCTTCCGAGCCGGCAACATTGCAACCATAAGAATCAGAGTGCTGAACAACTTTGACAAGCTCGACAAGAACAAGTTTAAACCTACTCTTACGGTGAATGGGAAGCCCGGGAATTGCTCCTTCGTGTCGGGTGTTCTTTCGGATTTTGAAGGAGACCCTAGCAGTTGGAAACTCTTCTTTACTGCCATAACCGCCGGGGCATTTAACGTTATGATCAACGAGGATCGCTACAAAGTGTTTGATTCTTCTCTGCATTTTCAAGTTCATCCAGGGCAAATATACCCGTCTTCGTGTGTTGCTTCCTGGATGGGTTTCAACAATGAATTCGAAGCAGGGACTAAAGCTAGGGTAATGATACTTCCAAAGGACGCGTTTGGAAATAATGTCTCCAAAAACAGTGAAGATCCAAGATTACATAATTTTACAGTGTCTGCAGTCTATGCAAATGGTTCCATAGCGAACATGCCAGACATCACGCATTTGGGTTGGAATGATTTCGGTTATATCATCTTGGAGTTCATTGTGGTGAAAGCCGGAGATCTCTTGTTGTACGTGGGAGATGGTGATCAGACCTTGAATGGCTCTCCCCTACCGCTTAAGGTGAACCCAGCAGGACCACTAGAAGTTTCCAATTGTGCGGTGAAATGGAATTTTGAACCAAATGCGTGGCAGTTATATTCGAAGATGGAAATCTTTATACATCAGCAAGATCGATATGGGAACCTCGTTCCTGGTCTGTATGCATTTGACGCTGAAGTTGTAGAGATAGAGACAAATTTGTCTATACCTGTTGCAGATTTGCACTTTGAAGAAGTGGTGGCTGGAATTCAGTTGTTTTCCTTTAGCAATCTAGAACCGGGGAACTTCTTGCTCACTATATCCGATATGAAGCATTATAAGAGTATCTCTAATATGCCATATGCTTATACTGTCTTTGTCGGTTATTGCAACGGGACAAACAGCGTTGTCAATGGATCTGGTTTAAACAGTTCTACTGCTGGTGTGCTAGCAGAGTTTTCAGTTTATTTGAATGATGCTTTTCAATATACCTCTCCTGTTGAAATAGAACGGCTCGAAGTACAAATTGTAAGGGAAAATGACTCCTATAATGTGCAGTCAAGCATATTTCCTATGCAAACCATCAATGGTATAAATGGGAGTGGACCTGCTCGAGCGTTAAGATATGGTGCAACCAGCCAGATAGAAATCGCTCCATCACCATCTATGGACCCAATAAATTCTTCTGTTGGGAGCTTCAGCGCCCTGGTAACTGCTTTCAATGTGGTGTATACACCCACCAAGAGTGGGATCTATAACATCTACGTATTTTGTGGAAATATTCTACTCAATGGCGGTCATCCGTTTACAATGGAAGTAAAAGGAGGAAAGGTTAACACATCACTCTCAGAAGTAGTCAAATTTTCTCCCAAGGTGCCGAAGATGATTAACAATGAAGTATTAGTGCAGCTCGTGGATTCATTTTATAATCCTCTCTTGTCACAACAATCTAGGCTGAAACTAGAGATTGCTTCAGTTAACAGTTCTGGCTTTTCAAATTCCATGTTTGTGGATAACAATGATGGCTCATACACCGTTCAATATCTGGCTGAGAATGTTGGTAGTTATGAGATATGCGCTTCATTTGACGGCAAACGCATCTCTCCCTGCCCCTTCGGGATCAATGTCTACACCAGCGAATATTTTCCCAGAGCCTACATTGATACAATATCTGTCTGGGAGGATGAGTCAATCGCTTTTGATGTTTTAGCAAACGACTACTTTGCTGGAAATAATGCAAGTGTTGTCGAATACTCAAAGGTACAATACAAAGTGAAGGTTTTCAAACCATTGTTTCACTACTCTCTCTTCTTTACAAAAGTGGAACTGCTACTGATCAGTGATCACAAGCAGGCGTATGCACGCGAACACCACCTACCCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009987 GO:0016020 GO:0016021 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051704 GO:0055046 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Filamin

Protein Analysis

744

Amino Acids

82.75

Weight (kDa)

5.09

Isoelectric Point (pI)

34.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004455)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150
fragaria_vesca	FvH4_4g18570
prunus_persica	Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1
pyrus_communis	pycom16g14000 pycom16g14010
rosa_chinensis	RchiOBHm_Chr4g0423171
rosa_laevigata	RLG00000007579
rosa_multiflora	Rmu_sc0000744.1_g000001 Rmu_sc0008829.1_g000002 Rmu_sc0020601.1_g000001
rosa_roxburghii	Rroxscaffold_5G00365330
rosa_rugosa	Rorug04G0184800 Rorug04G0184900
rosa_samantha	Rh4AG244300 Rh4AG244400 Rh4BG249500 Rh4BG249600 Rh4CG258600 Rh4CG258700 Rh4DG244300 Rh4DG244400
rosa_wichuraiana	Rw4G021050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1185, 1773
AasI	GACNNNNNNGTC	1 cut(s)	1066
Acc36I	ACCTGC	1 cut(s)	1462
AccB1I	GGYRCC	1 cut(s)	1720
AccBSI	CCGCTC	1 cut(s)	65
AccI	GTMKAC	2 cut(s)	1577, 1974
AccII	CGCG	2 cut(s)	659, 2211
AciI	CCGC	5 cut(s)	63, 480, 881, 926, 1641
AclI	AACGTT	1 cut(s)	495
AclWI	GGATC	5 cut(s)	519, 686, 1270, 1604, 1973
AcsI	RAATTY	9 cut(s)	136, 227, 611, 937, 1063, 1113, 1525, 1706, 1843
AcuI	CTGAAG	3 cut(s)	1062, 1528, 1803
AfaI	GTAC	3 cut(s)	839, 1368, 2109
AfiI	CCNNNNNNNGG	1 cut(s)	1593
AflII	CTTAAG	1 cut(s)	884
AflIII	ACRYGT	1 cut(s)	657
AjnI	CCWGG	4 cut(s)	556, 590, 1018, 1551
AjuI	GAANNNNNNNTTGG	2 cut(s)	1513, 1545
AluBI	AGCT	5 cut(s)	102, 349, 632, 1542, 1756
AluI	AGCT	5 cut(s)	102, 349, 632, 1542, 1756
Alw26I	GTCTC	4 cut(s)	132, 435, 679, 1052
AlwI	GGATC	5 cut(s)	519, 686, 1270, 1604, 1973
AlwNI	CAGNNNCTG	1 cut(s)	719
Ama87I	CYCGRG	2 cut(s)	395, 1458
ApeKI	GCWGC	2 cut(s)	245, 1753
ApoI	RAATTY	9 cut(s)	136, 227, 611, 937, 1063, 1113, 1525, 1706, 1843
Asp700I	GAANNNNTTC	4 cut(s)	461, 782, 1989, 2126
AspLEI	GCGC	2 cut(s)	1550, 1925
AspS9I	GGNCC	3 cut(s)	902, 1451, 1516
AsuC2I	CCSGG	4 cut(s)	396, 397, 484, 1146
AsuHPI	GGTGA	7 cut(s)	48, 394, 826, 863, 901, 940, 1497
AsuII	TTCGAA	3 cut(s)	225, 615, 968
AsuNHI	GCTAGC	1 cut(s)	1294
AvaI	CYCGRG	2 cut(s)	395, 1458
AvaII	GGWCC	3 cut(s)	902, 1451, 1516
BanI	GGYRCC	1 cut(s)	1720
BarI	GAAGNNNNNNTAC	2 cut(s)	630, 662
BauI	CACGAG	1 cut(s)	1757
BbsI	GAAGAC	1 cut(s)	567
BbvI	GCAGC	2 cut(s)	257, 1765
BccI	CCATC	8 cut(s)	268, 589, 842, 967, 1436, 1510, 1516, 1862
BceAI	ACGGC	2 cut(s)	1373, 1951
BcgI	CGANNNNNNTGC	2 cut(s)	2051, 2085
BciT130I	CCWGG	4 cut(s)	558, 592, 1020, 1553
BclI	TGATCA	5 cut(s)	96, 501, 853, 2181, 2188
BcnI	CCSGG	4 cut(s)	396, 397, 484, 1146
BcoDI	GTCTC	4 cut(s)	132, 435, 679, 1052
BfaI	CTAG	8 cut(s)	68, 447, 633, 908, 1139, 1295, 1797, 1808
BfmI	CTRYAG	2 cut(s)	131, 720
BfoI	RGCGCY	1 cut(s)	1551
BfrI	CTTAAG	1 cut(s)	884
BfuAI	ACCTGC	1 cut(s)	1462
BglII	AGATCT	1 cut(s)	826
BisI	GCNGC	2 cut(s)	246, 1754
BlsI	GCNGC	2 cut(s)	247, 1755
Bme1390I	CCNGG	8 cut(s)	396, 397, 484, 558, 592, 1020, 1146, 1553
Bme18I	GGWCC	3 cut(s)	902, 1451, 1516
BmeT110I	CYCGRG	2 cut(s)	395, 1458
BmgT120I	GGNCC	3 cut(s)	902, 1451, 1516
BmiI	GGNNCC	4 cut(s)	739, 1010, 1518, 1722
BmrFI	CCNGG	8 cut(s)	396, 397, 484, 558, 592, 1020, 1146, 1553
BmsI	GCATC	3 cut(s)	240, 1312, 1953
BmtI	GCTAGC	1 cut(s)	1298
BpiI	GAAGAC	1 cut(s)	567
Bpu14I	TTCGAA	3 cut(s)	225, 615, 968
BpuMI	CCSGG	4 cut(s)	396, 397, 484, 1146
Bsa29I	ATCGAT	1 cut(s)	1000
BsaAI	YACGTR	2 cut(s)	841, 1612
BsaBI	GATNNNNATC	3 cut(s)	852, 977, 1493
BsaI	GGTCTC	1 cut(s)	435
BsaJI	CCNNGG	6 cut(s)	395, 483, 557, 1145, 1551, 1716
BsaXI	ACNNNNNCTCC	4 cut(s)	1662, 1692, 2018, 2048
Bsc4I	CCNNNNNNNGG	1 cut(s)	1593
Bse118I	RCCGGY	1 cut(s)	299
Bse3DI	GCAATG	1 cut(s)	306
Bse8I	GATNNNNATC	3 cut(s)	852, 977, 1493
BseBI	CCWGG	4 cut(s)	558, 592, 1020, 1553
BseCI	ATCGAT	1 cut(s)	1000
BseDI	CCNNGG	6 cut(s)	395, 483, 557, 1145, 1551, 1716
BseGI	GGATG	6 cut(s)	279, 283, 553, 600, 1645, 2035
BseJI	GATNNNNATC	3 cut(s)	852, 977, 1493
BseLI	CCNNNNNNNGG	1 cut(s)	1593
BseMI	GCAATG	1 cut(s)	306
BseMII	CTCAG	2 cut(s)	1707, 1887
BseXI	GCAGC	2 cut(s)	257, 1765
BseYI	CCCAGC	1 cut(s)	895
BsgI	GTGCAG	2 cut(s)	1421, 1772
Bsh1236I	CGCG	2 cut(s)	659, 2211
BshNI	GGYRCC	1 cut(s)	1720
BshVI	ATCGAT	1 cut(s)	1000
BsiHKCI	CYCGRG	2 cut(s)	395, 1458
BsiSI	CCGG	6 cut(s)	254, 300, 396, 483, 822, 1145
BslFI	GGGAC	2 cut(s)	637, 1255
BslI	CCNNNNNNNGG	1 cut(s)	1593
BsmAI	GTCTC	4 cut(s)	132, 435, 679, 1052
BsmFI	GGGAC	2 cut(s)	637, 1255
Bso31I	GGTCTC	1 cut(s)	435
BsoBI	CYCGRG	2 cut(s)	395, 1458
Bsp119I	TTCGAA	3 cut(s)	225, 615, 968
BspACI	CCGC	5 cut(s)	63, 480, 881, 926, 1641
BspCNI	CTCAG	2 cut(s)	1706, 1888
BspDI	ATCGAT	1 cut(s)	1000
BspFNI	CGCG	2 cut(s)	659, 2211
BspLI	GGNNCC	4 cut(s)	739, 1010, 1518, 1722
BspMAI	CTGCAG	2 cut(s)	135, 724
BspMI	ACCTGC	1 cut(s)	1462
BspOI	GCTAGC	1 cut(s)	1298
BspPI	GGATC	5 cut(s)	519, 686, 1270, 1604, 1973
BspT104I	TTCGAA	3 cut(s)	225, 615, 968
BspT107I	GGYRCC	1 cut(s)	1720
BspTI	CTTAAG	1 cut(s)	884
BspTNI	GGTCTC	1 cut(s)	435
BsrBI	CCGCTC	1 cut(s)	65
BsrDI	GCAATG	1 cut(s)	306
BsrFI	RCCGGY	1 cut(s)	299
BssAI	RCCGGY	1 cut(s)	299
BssECI	CCNNGG	6 cut(s)	395, 483, 557, 1145, 1551, 1716
BssNAI	GTATAC	1 cut(s)	1578
BssSI	CACGAG	1 cut(s)	1757
BssT1I	CCWWGG	1 cut(s)	1716
Bst1107I	GTATAC	1 cut(s)	1578
Bst2BI	CACGAG	1 cut(s)	1757
Bst2UI	CCWGG	4 cut(s)	558, 592, 1020, 1553
Bst4CI	ACNGT	9 cut(s)	44, 54, 382, 686, 715, 1219, 1277, 1829, 1882
Bst6I	CTCTTC	2 cut(s)	467, 2159
BstAFI	CTTAAG	1 cut(s)	884
BstAPI	GCANNNNNTGC	1 cut(s)	728
BstBAI	YACGTR	2 cut(s)	841, 1612
BstBI	TTCGAA	3 cut(s)	225, 615, 968
BstC8I	GCNNGC	4 cut(s)	301, 1296, 2199, 2209
BstDEI	CTNAG	2 cut(s)	1693, 1896
BstF5I	GGATG	6 cut(s)	279, 283, 553, 600, 1645, 2035
BstFNI	CGCG	2 cut(s)	659, 2211
BstH2I	RGCGCY	1 cut(s)	1551
BstHHI	GCGC	2 cut(s)	1550, 1925
BstMAI	GTCTC	4 cut(s)	132, 435, 679, 1052
BstMWI	GCNNNNNNNGC	3 cut(s)	479, 728, 1037
BstNI	CCWGG	4 cut(s)	558, 592, 1020, 1553
BstNSI	RCATGY	1 cut(s)	754
BstSCI	CCNGG	8 cut(s)	394, 395, 482, 556, 590, 1018, 1144, 1551
BstSFI	CTRYAG	2 cut(s)	131, 720
BstSNI	TACGTA	1 cut(s)	1612
BstUI	CGCG	2 cut(s)	659, 2211
BstV1I	GCAGC	2 cut(s)	257, 1765
BstV2I	GAAGAC	1 cut(s)	567
BstX2I	RGATCY	4 cut(s)	691, 826, 1262, 1596
BstXI	CCANNNNNNTGG	2 cut(s)	954, 1855
BstYI	RGATCY	4 cut(s)	691, 826, 1262, 1596
BstZ17I	GTATAC	1 cut(s)	1578
Bsu15I	ATCGAT	1 cut(s)	1000
BsuTUI	ATCGAT	1 cut(s)	1000
BtgZI	GCGATG	1 cut(s)	263
BtsCI	GGATG	6 cut(s)	279, 283, 553, 600, 1645, 2035
BtsIMutI	CAGTG	3 cut(s)	691, 720, 2191
BveI	ACCTGC	1 cut(s)	1462
Cac8I	GCNNGC	4 cut(s)	301, 1296, 2199, 2209
CaiI	CAGNNNCTG	1 cut(s)	719
CfoI	GCGC	2 cut(s)	1550, 1925
Cfr10I	RCCGGY	1 cut(s)	299
Cfr13I	GGNCC	3 cut(s)	902, 1451, 1516
Cfr9I	CCCGGG	1 cut(s)	395
ClaI	ATCGAT	1 cut(s)	1000
CseI	GACGC	2 cut(s)	665, 1046
Csp6I	GTAC	3 cut(s)	838, 1367, 2108
CviAII	CATG	3 cut(s)	163, 751, 1849
CviQI	GTAC	3 cut(s)	838, 1367, 2108
DdeI	CTNAG	2 cut(s)	1693, 1896
DraI	TTTAAA	2 cut(s)	367, 1272
DrdI	GACNNNNNNGTC	1 cut(s)	1066
DseDI	GACNNNNNNGTC	1 cut(s)	1066
Eam1104I	CTCTTC	2 cut(s)	467, 2159
EarI	CTCTTC	2 cut(s)	467, 2159
Eco105I	TACGTA	1 cut(s)	1612
Eco130I	CCWWGG	1 cut(s)	1716
Eco31I	GGTCTC	1 cut(s)	435
Eco47I	GGWCC	3 cut(s)	902, 1451, 1516
Eco57I	CTGAAG	3 cut(s)	1062, 1528, 1803
Eco88I	CYCGRG	2 cut(s)	395, 1458
EcoRI	GAATTC	3 cut(s)	136, 611, 1113
EcoRII	CCWGG	4 cut(s)	556, 590, 1018, 1551
EcoT14I	CCWWGG	1 cut(s)	1716
EcoT22I	ATGCAT	1 cut(s)	1033
ErhI	CCWWGG	1 cut(s)	1716
FaeI	CATG	3 cut(s)	166, 754, 1852
FaqI	GGGAC	2 cut(s)	637, 1255
FatI	CATG	3 cut(s)	162, 750, 1848
FauNDI	CATATG	1 cut(s)	1207
FbaI	TGATCA	5 cut(s)	96, 501, 853, 2181, 2188
FblI	GTMKAC	2 cut(s)	1577, 1974
Fnu4HI	GCNGC	2 cut(s)	246, 1754
FokI	GGATG	6 cut(s)	286, 290, 540, 607, 1632, 2042
Fsp4HI	GCNGC	2 cut(s)	246, 1754
FspBI	CTAG	8 cut(s)	68, 447, 633, 908, 1139, 1295, 1797, 1808
GlaI	GCGC	2 cut(s)	1549, 1924
GluI	GCNGC	2 cut(s)	246, 1754
GsaI	CCCAGC	1 cut(s)	899
HaeII	RGCGCY	1 cut(s)	1551
HapII	CCGG	6 cut(s)	254, 300, 396, 483, 822, 1145
HgaI	GACGC	2 cut(s)	665, 1046
HhaI	GCGC	2 cut(s)	1550, 1925
Hin1II	CATG	3 cut(s)	166, 754, 1852
Hin6I	GCGC	2 cut(s)	1548, 1923
HinP1I	GCGC	2 cut(s)	1548, 1923
HincII	GTYRAC	2 cut(s)	1681, 1825
HindII	GTYRAC	2 cut(s)	1681, 1825
HinfI	GANTC	5 cut(s)	321, 530, 1388, 1763, 2033
HpaI	GTTAAC	2 cut(s)	1681, 1825
HpaII	CCGG	6 cut(s)	254, 300, 396, 483, 822, 1145
HphI	GGTGA	7 cut(s)	48, 394, 826, 863, 901, 940, 1497
Hpy166II	GTNNAC	8 cut(s)	261, 892, 1451, 1578, 1653, 1681, 1825, 1975
Hpy188I	TCNGA	8 cut(s)	112, 238, 296, 326, 430, 858, 1171, 1696
Hpy188III	TCNNGA	3 cut(s)	68, 1139, 1963
Hpy8I	GTNNAC	8 cut(s)	261, 892, 1451, 1578, 1653, 1681, 1825, 1975
HpyAV	CCTTC	6 cut(s)	117, 301, 418, 431, 1969, 2116
HpyCH4III	ACNGT	9 cut(s)	44, 54, 382, 686, 715, 1219, 1277, 1829, 1882
HpyCH4IV	ACGT	3 cut(s)	495, 840, 1611
HpyF10VI	GCNNNNNNNGC	3 cut(s)	479, 728, 1037
HpyF3I	CTNAG	2 cut(s)	1693, 1896
HpySE526I	ACGT	3 cut(s)	495, 840, 1611
Hsp92II	CATG	3 cut(s)	166, 754, 1852
HspAI	GCGC	2 cut(s)	1548, 1923
KroI	GCCGGC	1 cut(s)	299
KroNI	GCCGGC	1 cut(s)	301
Ksp22I	TGATCA	5 cut(s)	96, 501, 853, 2181, 2188
KspAI	GTTAAC	2 cut(s)	1681, 1825
LmnI	GCTCC	3 cut(s)	410, 1504, 1539
Lsp1109I	GCAGC	2 cut(s)	257, 1765
LweI	GCATC	3 cut(s)	240, 1312, 1953
MaeI	CTAG	8 cut(s)	68, 447, 633, 908, 1139, 1295, 1797, 1808
MaeII	ACGT	3 cut(s)	495, 840, 1611
MaeIII	GTNAC	3 cut(s)	54, 1555, 1785
MbiI	CCGCTC	1 cut(s)	65
MboII	GAAGA	9 cut(s)	454, 525, 567, 701, 982, 1109, 1521, 1738, 2146
MfeI	CAATTG	1 cut(s)	919
MflI	RGATCY	4 cut(s)	691, 826, 1262, 1596
MluI	ACGCGT	1 cut(s)	657
MlyI	GAGTC	2 cut(s)	1382, 2042
MmeI	TCCRAC	3 cut(s)	251, 434, 755
MnlI	CCTC	8 cut(s)	157, 203, 502, 1022, 1348, 1664, 1788, 2020
Mph1103I	ATGCAT	1 cut(s)	1033
MroNI	GCCGGC	1 cut(s)	299
MroXI	GAANNNNTTC	4 cut(s)	461, 782, 1989, 2126
MseI	TTAA	8 cut(s)	366, 492, 885, 1271, 1466, 1680, 1734, 1824
MslI	CAYNNNNRTG	2 cut(s)	812, 1853
MspCI	CTTAAG	1 cut(s)	884
MspI	CCGG	6 cut(s)	254, 300, 396, 483, 822, 1145
MspR9I	CCNGG	8 cut(s)	396, 397, 484, 558, 592, 1020, 1146, 1553
MssI	GTTTAAAC	2 cut(s)	367, 1272
MunI	CAATTG	1 cut(s)	919
MvaI	CCWGG	4 cut(s)	558, 592, 1020, 1553
MvnI	CGCG	2 cut(s)	659, 2211
MwoI	GCNNNNNNNGC	3 cut(s)	479, 728, 1037
NaeI	GCCGGC	1 cut(s)	301
NciI	CCSGG	4 cut(s)	396, 397, 484, 1146
NdeI	CATATG	1 cut(s)	1207
NgoMIV	GCCGGC	1 cut(s)	299
NheI	GCTAGC	1 cut(s)	1294
NlaIII	CATG	3 cut(s)	166, 754, 1852
NlaIV	GGNNCC	4 cut(s)	739, 1010, 1518, 1722
NmeAIII	GCCGAG	1 cut(s)	130
NmuCI	GTSAC	2 cut(s)	54, 1785
NsiI	ATGCAT	1 cut(s)	1033
NspI	RCATGY	1 cut(s)	754
NspV	TTCGAA	3 cut(s)	225, 615, 968
PaeR7I	CTCGAG	1 cut(s)	1458
PdiI	GCCGGC	1 cut(s)	301
PdmI	GAANNNNTTC	4 cut(s)	461, 782, 1989, 2126
PfeI	GAWTC	3 cut(s)	321, 530, 1763
PfoI	TCCNGGA	1 cut(s)	590
PkrI	GCNGC	2 cut(s)	247, 1755
PleI	GAGTC	2 cut(s)	1382, 2041
PmeI	GTTTAAAC	2 cut(s)	367, 1272
PpsI	GAGTC	2 cut(s)	1382, 2041
Ppu21I	YACGTR	2 cut(s)	841, 1612
PsiI	TTATAA	2 cut(s)	1185, 1773
Psp1406I	AACGTT	1 cut(s)	495
Psp6I	CCWGG	4 cut(s)	556, 590, 1018, 1551
PspFI	CCCAGC	1 cut(s)	895
PspGI	CCWGG	4 cut(s)	556, 590, 1018, 1551
PspN4I	GGNNCC	4 cut(s)	739, 1010, 1518, 1722
PspPI	GGNCC	3 cut(s)	902, 1451, 1516
PspXI	VCTCGAGB	1 cut(s)	1458
PsrI	GAACNNNNNNTAC	1 cut(s)	2205
PstI	CTGCAG	2 cut(s)	135, 724
PstNI	CAGNNNCTG	1 cut(s)	719
PsuI	RGATCY	4 cut(s)	691, 826, 1262, 1596
RsaI	GTAC	3 cut(s)	839, 1368, 2109
RsaNI	GTAC	3 cut(s)	838, 1367, 2108
RseI	CAYNNNNRTG	2 cut(s)	812, 1853
SaqAI	TTAA	8 cut(s)	366, 492, 885, 1271, 1466, 1680, 1734, 1824
SatI	GCNGC	2 cut(s)	246, 1754
Sau96I	GGNCC	3 cut(s)	902, 1451, 1516
SchI	GAGTC	2 cut(s)	1382, 2042
ScrFI	CCNGG	8 cut(s)	396, 397, 484, 558, 592, 1020, 1146, 1553
SfaNI	GCATC	3 cut(s)	240, 1312, 1953
SfcI	CTRYAG	2 cut(s)	131, 720
Sfr274I	CTCGAG	1 cut(s)	1458
SfuI	TTCGAA	3 cut(s)	225, 615, 968
SinI	GGWCC	3 cut(s)	902, 1451, 1516
SlaI	CTCGAG	1 cut(s)	1458
SmaI	CCCGGG	1 cut(s)	397
SmiMI	CAYNNNNRTG	2 cut(s)	812, 1853
SmlI	CTYRAG	2 cut(s)	884, 1458
SmoI	CTYRAG	2 cut(s)	884, 1458
SnaBI	TACGTA	1 cut(s)	1612
SsiI	CCGC	5 cut(s)	63, 480, 881, 926, 1641
SspI	AATATT	3 cut(s)	32, 1627, 1988
SspMI	CTAG	8 cut(s)	68, 447, 633, 908, 1139, 1295, 1797, 1808
StyD4I	CCNGG	8 cut(s)	394, 395, 482, 556, 590, 1018, 1144, 1551
StyI	CCWWGG	1 cut(s)	1716
TaaI	ACNGT	9 cut(s)	44, 54, 382, 686, 715, 1219, 1277, 1829, 1882
TaiI	ACGT	3 cut(s)	498, 843, 1614
TaqI	TCGA	9 cut(s)	171, 225, 351, 615, 968, 1000, 1362, 1459, 2094
TatI	WGTACW	1 cut(s)	1366
TfiI	GAWTC	3 cut(s)	321, 530, 1763
Tru1I	TTAA	8 cut(s)	366, 492, 885, 1271, 1466, 1680, 1734, 1824
Tru9I	TTAA	8 cut(s)	366, 492, 885, 1271, 1466, 1680, 1734, 1824
TscAI	CASTG	3 cut(s)	691, 720, 2191
TseFI	GTSAC	2 cut(s)	54, 1785
TseI	GCWGC	2 cut(s)	245, 1753
Tsp45I	GTSAC	2 cut(s)	54, 1785
TspDTI	ATGAA	7 cut(s)	542, 624, 796, 1190, 1755, 1755, 1917
TspGWI	ACGGA	2 cut(s)	96, 1638
TspMI	CCCGGG	1 cut(s)	395
TspRI	CASTG	3 cut(s)	691, 720, 2191
Vha464I	CTTAAG	1 cut(s)	884
VpaK11BI	GGWCC	3 cut(s)	902, 1451, 1516
XapI	RAATTY	9 cut(s)	136, 227, 611, 937, 1063, 1113, 1525, 1706, 1843
XbaI	TCTAGA	2 cut(s)	67, 1138
XceI	RCATGY	1 cut(s)	754
XhoI	CTCGAG	1 cut(s)	1458
XmaI	CCCGGG	1 cut(s)	395
XmiI	GTMKAC	2 cut(s)	1577, 1974
XmnI	GAANNNNTTC	4 cut(s)	461, 782, 1989, 2126
XspI	CTAG	8 cut(s)	68, 447, 633, 908, 1139, 1295, 1797, 1808
Zsp2I	ATGCAT	1 cut(s)	1033

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.