Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000744.1

Orthogroup ID

OG0004455

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 5287

Gene Structure 5287 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000744.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2422 bp

atgagccagaccggcctcaccctcaccgcgccgctcctctctcctcctcctcctccgccatccgatcaaccccacttgaacgtcaccgtctacgacgacgacgacaatggcaacggcagcttcatcaacccgtttgattttcccgggtcgggcgggtttaaggtgcccgtatcaacgacagcggatccgttcaagaaccatactttgaaaatcggaggggtttacgagtggttaaagatcggggtttgcttccccatcgcgattttgaggcttgtgatctttggggtttcgttgctgattggcttattgttcttctgtgtagtactagtactagaagctgaagccgagctagttggagccaaagaaggtggtggagatttgactgagttggtggttgggttcatcagagtagtcgtcggaggcggcggtgctgctaagccggttgagggagttgaatcgaaagacgagggcgaggaagacaaagacccatttagtggcgagggcgagggagaaaagcagaaagaatttgaaaaaagagagagaagatcgatctctgcaattgcatggcccttttcccatgttagctcggctttccagatggagttggaggctatgagagcgggtcttctactacttattcaccaaggcatggatggtgtggacattgagaccgactgtgccgtagtggttacagcacttaaaggaaatatggaagatctttcagaggtaggttgtaatgtggaggattgcaaagattatatgagtgcaattccctcctacaatttacaatctatttacaggggagcaaataagcccaagcctctcactttttctcccatggcattcaaaatgaacttgctcatattcatctcactcttggttttctcagttggctccaagctttcatattcagtcaacgcaacggtgccggagttcacattcagttggctggacgataaagacacatttcaagcaggcgaaatcgccaccataagcatcagagcactaaacaactttgacaagcttgacaagaatgcgttcaagcccactcttacagtagatggaaagattgggaatagctctgtagtatctggggttctttcagattttgaaggagaccctactagttggaagcttttctttactacaatgacagccgggttgttcaacgtgttgatcgatgaggaccactacaaagtgtttgattcatctctgcatttccaagttcatccagggaaaatatacccatctgtctgtattgcttcatggatgggtttcgtccacgagtttgaagctggtgctcaagctagagtacagatacttccgaaggatgcatttgggaataggatcaatgaaaccagtgaaggtctaagggcacataattttacagggtctgtatttcatgcaaatgattccattgcaagcataccgaacatcacccactttggttggaaccaatttggttatatcatcatggaattcattgtggtaaaagctggagacctcttgttgcatgtggaaggtggtaatcagagcttaaatggctgtccactaccctttaaggtgaacccaggacctcttgaagtttccaattgtgtggtgaaatgggattttgaaccaaatgcatggcaattatattccaagatggaaatctttatataccagcaagatcaatatggtaaccttgttccaggactatatgaatttgatgctgaagttgttgagacagagacgaatttgtcaatacctgttccagatttgcactttgaagaagtggcggctggaattcagctgttttcttttactaatctggaaccaggcaactttttgctgactacatcagatatgaaacatgataaaagcatctctaatatgccatatgcttataccgtctttgttggtgagtttcatcttgttttagtaacatattggtgttataagttattcttcctccttacacatgcctctcttgtgtacatttggataggctattgcaatgggataaacagtgttgttaatggaactggtttaaatagctccgcggcaggagaaagatcagaattctcagtttatttgaatgatgcttatcaaaatccctctccagttgaaatcgaaaggcttgaaatacaaattgtaagggaaattgactcctatcatgtgcagtcgagcatatttcctatccagatcatcaatgggagtggacctgcacaaggaataagatatggtacaaccagccaaatagaatttgctccttcaccatctatgaccttgacaaattctactgtcgggaacttcagcactctggcaactgctctcaatgtggtatatacacctgacaagagtgggatttataaaatttatgtgttttgtggaaatattttgctgaatggaggccgtccctttgataaggaagttatagcag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009987 GO:0016020 GO:0016021 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051704 GO:0055046 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Filamin

Protein Analysis

807

Amino Acids

88.57

Weight (kDa)

4.73

Isoelectric Point (pI)

30.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004455)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150
fragaria_vesca	FvH4_4g18570
prunus_persica	Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1
pyrus_communis	pycom16g14000 pycom16g14010
rosa_chinensis	RchiOBHm_Chr4g0423171
rosa_laevigata	RLG00000007579
rosa_multiflora	Rmu_sc0000744.1_g000001 Rmu_sc0008829.1_g000002 Rmu_sc0020601.1_g000001
rosa_roxburghii	Rroxscaffold_5G00365330
rosa_rugosa	Rorug04G0184800 Rorug04G0184900
rosa_samantha	Rh4AG244300 Rh4AG244400 Rh4BG249500 Rh4BG249600 Rh4CG258600 Rh4CG258700 Rh4DG244300 Rh4DG244400
rosa_wichuraiana	Rw4G021050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1938, 2352
AasI	GACNNNNNNGTC	1 cut(s)	1738
Acc36I	ACCTGC	1 cut(s)	2212
AccB1I	GGYRCC	2 cut(s)	163, 925
AccB7I	CCANNNNNTGG	2 cut(s)	494, 649
AccBSI	CCGCTC	2 cut(s)	34, 620
AccI	GTMKAC	1 cut(s)	90
AccII	CGCG	3 cut(s)	29, 260, 2042
AclWI	GGATC	3 cut(s)	179, 192, 1355
AcsI	RAATTY	9 cut(s)	524, 1478, 1703, 1735, 1785, 2060, 2243, 2275, 2355
AcuI	CTGAAG	3 cut(s)	360, 1734, 2278
AfaI	GTAC	5 cut(s)	324, 330, 1314, 1976, 2227
AfiI	CCNNNNNNNGG	5 cut(s)	149, 446, 494, 649, 2210
AflIII	ACRYGT	1 cut(s)	1170
AhlI	ACTAGT	2 cut(s)	325, 1124
AjnI	CCWGG	4 cut(s)	1231, 1570, 1690, 1816
Alw21I	GWGCWC	2 cut(s)	1006, 1303
Alw26I	GTCTC	5 cut(s)	662, 1110, 1494, 1718, 1724
AlwI	GGATC	3 cut(s)	179, 192, 1355
AlwNI	CAGNNNCTG	1 cut(s)	1394
Ama87I	CYCGRG	1 cut(s)	143
AoxI	GGCC	3 cut(s)	13, 566, 2392
ApeKI	GCWGC	2 cut(s)	117, 431
ApoI	RAATTY	9 cut(s)	524, 1478, 1703, 1735, 1785, 2060, 2243, 2275, 2355
Asp700I	GAANNNNTTC	2 cut(s)	1037, 1136
AspLEI	GCGC	1 cut(s)	31
AspS9I	GGNCC	4 cut(s)	567, 1186, 1574, 2201
AsuC2I	CCSGG	3 cut(s)	144, 145, 1159
AsuHPI	GGTGA	9 cut(s)	10, 16, 76, 632, 1429, 1576, 1612, 1913, 2247
AvaI	CYCGRG	1 cut(s)	143
AvaII	GGWCC	3 cut(s)	1186, 1574, 2201
BaeGI	GKGCMC	2 cut(s)	168, 1378
BamHI	GGATCC	1 cut(s)	184
BanI	GGYRCC	2 cut(s)	163, 925
BarI	GAAGNNNNNNTAC	2 cut(s)	1305, 1337
BauI	CACGAG	1 cut(s)	1283
BbsI	GAAGAC	2 cut(s)	483, 617
Bbv12I	GWGCWC	2 cut(s)	1006, 1303
BbvI	GCAGC	2 cut(s)	129, 418
BccI	CCATC	9 cut(s)	67, 263, 592, 647, 1055, 1255, 1264, 1639, 2266
BceAI	ACGGC	3 cut(s)	130, 665, 2379
BciT130I	CCWGG	4 cut(s)	1233, 1572, 1692, 1818
BcnI	CCSGG	3 cut(s)	144, 145, 1159
BcoDI	GTCTC	5 cut(s)	662, 1110, 1494, 1718, 1724
BcuI	ACTAGT	2 cut(s)	325, 1124
BfaI	CTAG	5 cut(s)	326, 332, 350, 1125, 1308
BfmI	CTRYAG	1 cut(s)	1083
BfuAI	ACCTGC	1 cut(s)	2212
BglI	GCCNNNNNGGC	1 cut(s)	12
BglII	AGATCT	1 cut(s)	715
BisI	GCNGC	6 cut(s)	32, 118, 424, 432, 1779, 2043
BlpI	GCTNAGC	1 cut(s)	435
BlsI	GCNGC	6 cut(s)	33, 119, 425, 433, 1780, 2044
BmcAI	AGTACT	2 cut(s)	324, 330
Bme1390I	CCNGG	7 cut(s)	144, 145, 1159, 1233, 1572, 1692, 1818
Bme18I	GGWCC	3 cut(s)	1186, 1574, 2201
BmeT110I	CYCGRG	1 cut(s)	143
BmgT120I	GGNCC	4 cut(s)	567, 1186, 1574, 2201
BmiI	GGNNCC	7 cut(s)	165, 186, 358, 895, 927, 1454, 1815
BmrFI	CCNGG	7 cut(s)	144, 145, 1159, 1233, 1572, 1692, 1818
BmsI	GCATC	5 cut(s)	1005, 1321, 1699, 1872, 2071
BpiI	GAAGAC	2 cut(s)	483, 617
BpmI	CTGGAG	2 cut(s)	1518, 2085
Bpu1102I	GCTNAGC	1 cut(s)	435
BpuEI	CTTGAG	1 cut(s)	1287
BpuMI	CCSGG	3 cut(s)	144, 145, 1159
Bsa29I	ATCGAT	2 cut(s)	548, 1179
BsaBI	GATNNNNATC	2 cut(s)	1649, 2085
BsaI	GGTCTC	3 cut(s)	662, 1110, 1494
BsaJI	CCNNGG	6 cut(s)	143, 643, 837, 1232, 1570, 2040
BsaXI	ACNNNNNCTCC	2 cut(s)	817, 847
Bsc4I	CCNNNNNNNGG	5 cut(s)	149, 446, 494, 649, 2210
Bse118I	RCCGGY	2 cut(s)	11, 439
Bse1I	ACTGG	3 cut(s)	1359, 2029, 2102
Bse3DI	GCAATG	2 cut(s)	1416, 2002
Bse8I	GATNNNNATC	2 cut(s)	1649, 2085
BseBI	CCWGG	4 cut(s)	1233, 1572, 1692, 1818
BseCI	ATCGAT	2 cut(s)	548, 1179
BseDI	CCNNGG	6 cut(s)	143, 643, 837, 1232, 1570, 2040
BseGI	GGATG	5 cut(s)	59, 658, 1228, 1275, 1336
BseJI	GATNNNNATC	2 cut(s)	1649, 2085
BseLI	CCNNNNNNNGG	5 cut(s)	149, 446, 494, 649, 2210
BseMI	GCAATG	2 cut(s)	1416, 2002
BseMII	CTCAG	3 cut(s)	375, 900, 2079
BseNI	ACTGG	3 cut(s)	1359, 2029, 2102
BseRI	GAGGAG	5 cut(s)	26, 33, 36, 39, 42
BseSI	GKGCMC	2 cut(s)	168, 1378
BseXI	GCAGC	2 cut(s)	129, 418
BsgI	GTGCAG	2 cut(s)	2180, 2190
Bsh1236I	CGCG	3 cut(s)	29, 260, 2042
BshFI	GGCC	3 cut(s)	15, 568, 2394
BshNI	GGYRCC	2 cut(s)	163, 925
BshVI	ATCGAT	2 cut(s)	548, 1179
BsiHKAI	GWGCWC	2 cut(s)	1006, 1303
BsiHKCI	CYCGRG	1 cut(s)	143
BsiSI	CCGG	5 cut(s)	12, 144, 440, 929, 1158
BslFI	GGGAC	1 cut(s)	2382
BslI	CCNNNNNNNGG	5 cut(s)	149, 446, 494, 649, 2210
BsmAI	GTCTC	5 cut(s)	662, 1110, 1494, 1718, 1724
BsmBI	CGTCTC	1 cut(s)	1724
BsmFI	GGGAC	1 cut(s)	2382
BsmI	GAATGC	2 cut(s)	842, 1039
BsnI	GGCC	3 cut(s)	15, 568, 2394
Bso31I	GGTCTC	3 cut(s)	662, 1110, 1494
BsoBI	CYCGRG	1 cut(s)	143
Bsp1286I	GDGCHC	4 cut(s)	168, 1006, 1303, 1378
Bsp1407I	TGTACA	1 cut(s)	1974
Bsp1720I	GCTNAGC	1 cut(s)	435
Bsp19I	CCATGG	1 cut(s)	837
Bsp68I	TCGCGA	1 cut(s)	260
BspANI	GGCC	3 cut(s)	15, 568, 2394
BspCNI	CTCAG	3 cut(s)	376, 899, 2078
BspDI	ATCGAT	2 cut(s)	548, 1179
BspFNI	CGCG	3 cut(s)	29, 260, 2042
BspLI	GGNNCC	7 cut(s)	165, 186, 358, 895, 927, 1454, 1815
BspMI	ACCTGC	1 cut(s)	2212
BspPI	GGATC	3 cut(s)	179, 192, 1355
BspT107I	GGYRCC	2 cut(s)	163, 925
BspTNI	GGTCTC	3 cut(s)	662, 1110, 1494
BsrBI	CCGCTC	2 cut(s)	34, 620
BsrDI	GCAATG	2 cut(s)	1416, 2002
BsrFI	RCCGGY	2 cut(s)	11, 439
BsrGI	TGTACA	1 cut(s)	1974
BsrI	ACTGG	3 cut(s)	1359, 2029, 2102
BssAI	RCCGGY	2 cut(s)	11, 439
BssECI	CCNNGG	6 cut(s)	143, 643, 837, 1232, 1570, 2040
BssSI	CACGAG	1 cut(s)	1283
BssT1I	CCWWGG	2 cut(s)	643, 837
Bst2BI	CACGAG	1 cut(s)	1283
Bst2UI	CCWGG	4 cut(s)	1233, 1572, 1692, 1818
Bst4CI	ACNGT	7 cut(s)	88, 677, 925, 1057, 1891, 2009, 2284
BstAUI	TGTACA	1 cut(s)	1974
BstC8I	GCNNGC	2 cut(s)	976, 1423
BstDEI	CTNAG	5 cut(s)	384, 435, 886, 1370, 2065
BstDSI	CCRYGG	2 cut(s)	837, 2040
BstEII	GGTNACC	1 cut(s)	1679
BstENI	CCTNNNNNAGG	1 cut(s)	2208
BstF5I	GGATG	5 cut(s)	59, 658, 1228, 1275, 1336
BstFNI	CGCG	3 cut(s)	29, 260, 2042
BstHHI	GCGC	1 cut(s)	31
BstMAI	GTCTC	5 cut(s)	662, 1110, 1494, 1718, 1724
BstMWI	GCNNNNNNNGC	4 cut(s)	12, 117, 617, 1542
BstNI	CCWGG	4 cut(s)	1233, 1572, 1692, 1818
BstNSI	RCATGY	2 cut(s)	1517, 1964
BstPI	GGTNACC	1 cut(s)	1679
BstSCI	CCNGG	7 cut(s)	142, 143, 1157, 1231, 1570, 1690, 1816
BstSFI	CTRYAG	1 cut(s)	1083
BstSLI	GKGCMC	2 cut(s)	168, 1378
BstUI	CGCG	3 cut(s)	29, 260, 2042
BstV1I	GCAGC	2 cut(s)	129, 418
BstV2I	GAAGAC	2 cut(s)	483, 617
BstX2I	RGATCY	2 cut(s)	184, 715
BstXI	CCANNNNNNTGG	2 cut(s)	1597, 1626
BstYI	RGATCY	2 cut(s)	184, 715
Bsu15I	ATCGAT	2 cut(s)	548, 1179
BsuRI	GGCC	3 cut(s)	15, 568, 2394
BsuTUI	ATCGAT	2 cut(s)	548, 1179
BtgI	CCRYGG	2 cut(s)	837, 2040
BtgZI	GCGATG	1 cut(s)	241
BtsCI	GGATG	5 cut(s)	59, 658, 1228, 1275, 1336
BtsIMutI	CAGTG	2 cut(s)	1366, 2014
BtuMI	TCGCGA	1 cut(s)	260
BveI	ACCTGC	1 cut(s)	2212
Cac8I	GCNNGC	2 cut(s)	976, 1423
CaiI	CAGNNNCTG	1 cut(s)	1394
CfoI	GCGC	1 cut(s)	31
Cfr10I	RCCGGY	2 cut(s)	11, 439
Cfr13I	GGNCC	4 cut(s)	567, 1186, 1574, 2201
Cfr42I	CCGCGG	1 cut(s)	2043
Cfr9I	CCCGGG	1 cut(s)	143
ClaI	ATCGAT	2 cut(s)	548, 1179
Csp6I	GTAC	5 cut(s)	323, 329, 1313, 1975, 2226
CspCI	CAANNNNNGTGG	6 cut(s)	349, 384, 1430, 1465, 2179, 2214
CviQI	GTAC	5 cut(s)	323, 329, 1313, 1975, 2226
DdeI	CTNAG	5 cut(s)	384, 435, 886, 1370, 2065
DraI	TTTAAA	1 cut(s)	2031
DrdI	GACNNNNNNGTC	1 cut(s)	1738
DseDI	GACNNNNNNGTC	1 cut(s)	1738
EciI	GGCGGA	1 cut(s)	45
Eco130I	CCWWGG	2 cut(s)	643, 837
Eco31I	GGTCTC	3 cut(s)	662, 1110, 1494
Eco47I	GGWCC	3 cut(s)	1186, 1574, 2201
Eco57I	CTGAAG	3 cut(s)	360, 1734, 2278
Eco88I	CYCGRG	1 cut(s)	143
Eco91I	GGTNACC	1 cut(s)	1679
EcoNI	CCTNNNNNAGG	1 cut(s)	2208
EcoO109I	RGGNCCY	1 cut(s)	1574
EcoO65I	GGTNACC	1 cut(s)	1679
EcoRI	GAATTC	3 cut(s)	1478, 1785, 2060
EcoRII	CCWGG	4 cut(s)	1231, 1570, 1690, 1816
EcoT14I	CCWWGG	2 cut(s)	643, 837
EcoT22I	ATGCAT	2 cut(s)	1336, 1627
ErhI	CCWWGG	2 cut(s)	643, 837
Esp3I	CGTCTC	1 cut(s)	1724
FalI	AAGNNNNNCTT	4 cut(s)	1124, 1156, 1931, 1963
FaqI	GGGAC	1 cut(s)	2382
FauI	CCCGC	2 cut(s)	146, 613
FauNDI	CATATG	1 cut(s)	1879
FblI	GTMKAC	1 cut(s)	90
Fnu4HI	GCNGC	6 cut(s)	32, 118, 424, 432, 1779, 2043
FokI	GGATG	5 cut(s)	46, 665, 1215, 1282, 1343
Fsp4HI	GCNGC	6 cut(s)	32, 118, 424, 432, 1779, 2043
FspBI	CTAG	5 cut(s)	326, 332, 350, 1125, 1308
GlaI	GCGC	1 cut(s)	30
GluI	GCNGC	6 cut(s)	32, 118, 424, 432, 1779, 2043
GsuI	CTGGAG	2 cut(s)	1518, 2085
HaeIII	GGCC	3 cut(s)	15, 568, 2394
HapII	CCGG	5 cut(s)	12, 144, 440, 929, 1158
HhaI	GCGC	1 cut(s)	31
Hin6I	GCGC	1 cut(s)	29
HinP1I	GCGC	1 cut(s)	29
HincII	GTYRAC	1 cut(s)	916
HindII	GTYRAC	1 cut(s)	916
HindIII	AAGCTT	3 cut(s)	899, 1022, 1133
HinfI	GANTC	4 cut(s)	455, 1205, 1412, 2147
HpaII	CCGG	5 cut(s)	12, 144, 440, 929, 1158
HphI	GGTGA	9 cut(s)	10, 16, 76, 632, 1429, 1576, 1612, 1913, 2247
Hpy188III	TCNNGA	8 cut(s)	193, 259, 595, 1580, 1754, 1811, 2182, 2287
Hpy99I	CGWCG	4 cut(s)	98, 101, 104, 419
HpyAV	CCTTC	6 cut(s)	359, 1106, 1321, 1358, 1514, 2262
HpyCH4III	ACNGT	7 cut(s)	88, 677, 925, 1057, 1891, 2009, 2284
HpyCH4IV	ACGT	2 cut(s)	81, 1170
HpyF10VI	GCNNNNNNNGC	4 cut(s)	12, 117, 617, 1542
HpyF3I	CTNAG	5 cut(s)	384, 435, 886, 1370, 2065
HpySE526I	ACGT	2 cut(s)	81, 1170
HspAI	GCGC	1 cut(s)	29
KspI	CCGCGG	1 cut(s)	2043
LmnI	GCTCC	6 cut(s)	39, 356, 803, 899, 2042, 2254
Lsp1109I	GCAGC	2 cut(s)	129, 418
LweI	GCATC	5 cut(s)	1005, 1321, 1699, 1872, 2071
MaeI	CTAG	5 cut(s)	326, 332, 350, 1125, 1308
MaeII	ACGT	2 cut(s)	81, 1170
MaeIII	GTNAC	4 cut(s)	82, 688, 1679, 1921
MbiI	CCGCTC	2 cut(s)	34, 620
MboII	GAAGA	7 cut(s)	304, 488, 555, 617, 725, 1781, 1939
MfeI	CAATTG	2 cut(s)	558, 1591
MflI	RGATCY	2 cut(s)	184, 715
MhlI	GDGCHC	4 cut(s)	168, 1006, 1303, 1378
MlyI	GAGTC	1 cut(s)	2141
MmeI	TCCRAC	5 cut(s)	334, 397, 585, 1109, 1430
Mph1103I	ATGCAT	2 cut(s)	1336, 1627
MroXI	GAANNNNTTC	2 cut(s)	1037, 1136
MseI	TTAA	7 cut(s)	159, 233, 699, 1538, 1560, 2016, 2030
MslI	CAYNNNNRTG	2 cut(s)	1407, 1930
MspA1I	CMGCKG	3 cut(s)	182, 1792, 2042
MspI	CCGG	5 cut(s)	12, 144, 440, 929, 1158
MspR9I	CCNGG	7 cut(s)	144, 145, 1159, 1233, 1572, 1692, 1818
MunI	CAATTG	2 cut(s)	558, 1591
Mva1269I	GAATGC	2 cut(s)	842, 1039
MvaI	CCWGG	4 cut(s)	1233, 1572, 1692, 1818
MvnI	CGCG	3 cut(s)	29, 260, 2042
MwoI	GCNNNNNNNGC	4 cut(s)	12, 117, 617, 1542
NciI	CCSGG	3 cut(s)	144, 145, 1159
NcoI	CCATGG	1 cut(s)	837
NdeI	CATATG	1 cut(s)	1879
NlaIV	GGNNCC	7 cut(s)	165, 186, 358, 895, 927, 1454, 1815
NmeAIII	GCCGAG	2 cut(s)	370, 566
NmuCI	GTSAC	1 cut(s)	82
NruI	TCGCGA	1 cut(s)	260
NsiI	ATGCAT	2 cut(s)	1336, 1627
NspI	RCATGY	2 cut(s)	1517, 1964
PcsI	WCGNNNNNNNCGW	2 cut(s)	99, 1176
PctI	GAATGC	2 cut(s)	842, 1039
PdmI	GAANNNNTTC	2 cut(s)	1037, 1136
PfeI	GAWTC	3 cut(s)	455, 1205, 1412
PflMI	CCANNNNNTGG	2 cut(s)	494, 649
PfoI	TCCNGGA	1 cut(s)	1690
PkrI	GCNGC	6 cut(s)	33, 119, 425, 433, 1780, 2044
PleI	GAGTC	1 cut(s)	2141
PpsI	GAGTC	1 cut(s)	2141
PpuMI	RGGWCCY	1 cut(s)	1574
PsiI	TTATAA	2 cut(s)	1938, 2352
Psp5II	RGGWCCY	1 cut(s)	1574
Psp6I	CCWGG	4 cut(s)	1231, 1570, 1690, 1816
PspEI	GGTNACC	1 cut(s)	1679
PspGI	CCWGG	4 cut(s)	1231, 1570, 1690, 1816
PspN4I	GGNNCC	7 cut(s)	165, 186, 358, 895, 927, 1454, 1815
PspPI	GGNCC	4 cut(s)	567, 1186, 1574, 2201
PspPPI	RGGWCCY	1 cut(s)	1574
PsrI	GAACNNNNNNTAC	2 cut(s)	1080, 1112
PstNI	CAGNNNCTG	1 cut(s)	1394
PsuI	RGATCY	2 cut(s)	184, 715
PvuII	CAGCTG	1 cut(s)	1792
RruI	TCGCGA	1 cut(s)	260
RsaI	GTAC	5 cut(s)	324, 330, 1314, 1976, 2227
RsaNI	GTAC	5 cut(s)	323, 329, 1313, 1975, 2226
RseI	CAYNNNNRTG	2 cut(s)	1407, 1930
SacII	CCGCGG	1 cut(s)	2043
SaqAI	TTAA	7 cut(s)	159, 233, 699, 1538, 1560, 2016, 2030
SatI	GCNGC	6 cut(s)	32, 118, 424, 432, 1779, 2043
Sau96I	GGNCC	4 cut(s)	567, 1186, 1574, 2201
ScaI	AGTACT	2 cut(s)	324, 330
SchI	GAGTC	1 cut(s)	2141
ScrFI	CCNGG	7 cut(s)	144, 145, 1159, 1233, 1572, 1692, 1818
SduI	GDGCHC	4 cut(s)	168, 1006, 1303, 1378
SfaNI	GCATC	5 cut(s)	1005, 1321, 1699, 1872, 2071
SfcI	CTRYAG	1 cut(s)	1083
Sfr303I	CCGCGG	1 cut(s)	2043
SgrBI	CCGCGG	1 cut(s)	2043
SinI	GGWCC	3 cut(s)	1186, 1574, 2201
SmaI	CCCGGG	1 cut(s)	145
SmiMI	CAYNNNNRTG	2 cut(s)	1407, 1930
SmlI	CTYRAG	1 cut(s)	1302
SmoI	CTYRAG	1 cut(s)	1302
SpeI	ACTAGT	2 cut(s)	325, 1124
SspI	AATATT	1 cut(s)	2377
SspMI	CTAG	5 cut(s)	326, 332, 350, 1125, 1308
StyD4I	CCNGG	7 cut(s)	142, 143, 1157, 1231, 1570, 1690, 1816
StyI	CCWWGG	2 cut(s)	643, 837
TaaI	ACNGT	7 cut(s)	88, 677, 925, 1057, 1891, 2009, 2284
TaiI	ACGT	2 cut(s)	84, 1173
TaqI	TCGA	5 cut(s)	458, 548, 1179, 2112, 2165
TaqII	GACCGA	1 cut(s)	686
TatI	WGTACW	4 cut(s)	322, 328, 1312, 1974
TauI	GCSGC	4 cut(s)	34, 426, 1781, 2045
TfiI	GAWTC	3 cut(s)	455, 1205, 1412
Tru1I	TTAA	7 cut(s)	159, 233, 699, 1538, 1560, 2016, 2030
Tru9I	TTAA	7 cut(s)	159, 233, 699, 1538, 1560, 2016, 2030
TscAI	CASTG	2 cut(s)	1366, 2014
TseFI	GTSAC	1 cut(s)	82
TseI	GCWGC	2 cut(s)	117, 431
Tsp45I	GTSAC	1 cut(s)	82
TspGWI	ACGGA	1 cut(s)	177
TspMI	CCCGGG	1 cut(s)	143
TspRI	CASTG	2 cut(s)	1366, 2014
Van91I	CCANNNNNTGG	2 cut(s)	494, 649
VpaK11BI	GGWCC	3 cut(s)	1186, 1574, 2201
XagI	CCTNNNNNAGG	1 cut(s)	2208
XapI	RAATTY	9 cut(s)	524, 1478, 1703, 1735, 1785, 2060, 2243, 2275, 2355
XceI	RCATGY	2 cut(s)	1517, 1964
XcmI	CCANNNNNNNNNTGG	2 cut(s)	650, 2189
XmaI	CCCGGG	1 cut(s)	143
XmiI	GTMKAC	1 cut(s)	90
XmnI	GAANNNNTTC	2 cut(s)	1037, 1136
XspI	CTAG	5 cut(s)	326, 332, 350, 1125, 1308
ZrmI	AGTACT	2 cut(s)	324, 330
Zsp2I	ATGCAT	2 cut(s)	1336, 1627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.