Rw4G021050

Filamin/ABP280 repeat

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
45434961 .. 45440795
5835 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G021050.1

Sequence Viewer

Length: 3345 bp
ATGGCATTCAAAATGAACTTGCTCATATTCATCTCACTCTTGGTTTTCTCAGTTGGCTCCAAGCTTTCATATTCAGACAACGCAGCGGTGTCGGAGTTCACATTCAGTTGGCTGGACGATAAAGACACATTTCAAGCCGGCGAAATCGCCACCATAAGCATCAGAGCACTAAACAACTTTGACAAGCTTGACAAGAATGCGTTCAAGCCCACTCTTACAGTAGATGGAAAGATTGGGAATAGCTCTGTAGTATCTGGGGTTCTTTCAGATTTTGAAGGAGACCCTACTAGTTGGAAGCTTTTCTTTACTACAATGACAGCCGGGTTGTTCAACGTGTTGATCGATGAGGACCACTACAAAGTGTTTGATTCATCTCTGCATTTCCAAGTTCATCCAGGGAAATTATACCCATCTGTCTGTATTGCTTCATGGATGGGTTTCGTCCACGAGTTTGAAGCTGGTGCTCAAGCTAGAGTACAGATACTTCCGAAGGATGCATTTGGGAATAAGATCAATGAAACCAGTGAAGATCTAAGGGTACATAATTTTACAGTGTCTGTATTTCATGCAAATGATTCCATTGCAAGCATACCGAACATCACCCACTTTGGTTGGAACCAATTTGGTTATATCATCATGGAATTCTTTGTGGTAAAAGCTGGAGACCTCTTGTTGCATGTGGAAGGTGGTAATCAGAGCTTAAATGGCTGTCCACTACCCTTTAAGGTGAACCCAGGACCTCTTGAAGTTTCCAATTGTGTGGTGAAATGGGATTTTGAACCAAATGCATGGCAATTATATTCCAAGATGGAAATCTTTATATACCAGCAAGATCAATATGGTAACCTTACAGAGACGAATTTGTCAATACCTGTTCCAGATTTGCACTTTGAAGAAGTGGCGGCTGGAATTCAGCTGTTTTCTTTTACTAATCTGGAACCAGGCAACTTTTTGCTGACTATATCAGATATGAAGCATGATAAAAGCATCTCTAATATGCCATATGCTTATACCGTCTTTGTTGGCTATTGCAATGGGATAAACAGTGTTGTTAATGGAACTGGTTTAAATAGCTCCACGGCAGGAGAAAGATCAGAATTCTCAGTTTATTTGAATGATGCTTATCAAAATCCCTCTCCAGTTGAAATCGAAAGGCTTGAAATACAAATTGTAAGGGAAATTGACTCCTATCATGTGCAGTCGAGCATATTTCCTATCCAGATCATCAATGGGAGTGGACCTGCTCAAGGAATAAGATATGGTACAACCAGCCAAATAGAATTTGCTCCTTCACCATCTATGACCTTGACAAATTCTACTGTCGGGAGCTTCAGCACTCTGGCAACTGCTCTCAATGTGGTATATACACCTGACAAGAGTGGGATTTATAAAATTTATGTGTTTTGTGGAAATATTTTGCTGAATGGAGGCCGTCCCTTTGATAAGGAAGTTATAGCAGGGAGTGTTGATCCATCATGCTCAACAGTTGTCAAATTTTCTCCCAAGGTGGCAAGGACGATTAATAATGAAGTAGTAGTGAAGCTCGGGGATTCATTTTTCAATCCCGTCTTGTCACAACAATCTGGGCTGAAACTAGAGATTGTTTCTGTAAACAGTTCTGGCTTTTCAAGTTCCTTGTTTGTGGACAATAATGATGGGTCATACACTGTACAATATCTGGCTAAGGAGGTTGGAACTTATGAGATGTGTGCTTCATTTGATGGCAAACGTATTTCTGCCTGCCCCTTTGGGGTCAATGTCTACAGTAGGGAATATTTTCCCAGAGCCGAAAATGATACAATTTCTGTGTGGGAGGATGAGTCAATTGCTTTTGATGTTTTGGCCAATGACTACTTTGCTGGAAATAATGCTAGTGTTGTTGAGTTCTCCAAGCCAGGTCATGGTTCCCTTATTGAGTATGGAAGGCTCCTCCGGTATACACCTTATAAAGACTATTATGGAAATGATTCCTTTGTGTACACAATGTCTGATATAAACGGCAATCTTGCTGCTGCTTTTGTAAACATATCTGTTCTCACCATCCCACCACAATTTGTTTCTTTTCCAAGTGAATTGCAAGCTACTGAAGGCGAGATTAATCCAAAATTTGGTGGTTTCTCTGGGTTTATGATAAGATATTCCGACATGATGGAGAACATCTCTGTTAATATTAGTGCGCAATCTGGGACAGTATTTCTGTCTCCGATGCTAATGCAATTCTGGGAGCCCATTTGGAATGGACTTTCTGTGTACAAAGAGGATGGAGGAGTGAAGGGGTTGATATTACAAGGCAGTGCGGAAGTAATCAATTTTGCCCTTAAGTCAATACAGTACTATGGTAACGAGAACTTCTGTGGCTATGATACTATTCGGCTCACTACGAGGAATAGGAATGGAGTAAATGACTTGCATATTCCAGTTTTTGTGGAACCTATCAATGATCCTCCCTTTATTCATGCACCTGAGTTTATCATTCTGAAAAGTAATGAAAATGGGTCACTGATATATGACAGAGAAACAGACAAGTTTGAGTTCTATATTGGAGACCCAGATCTTCTTGCGTTCCCTGGTAATGAATCCCTTTTTTCGGTCATCTTCTCTATGGAAGTTAATGATGGATATTTGGTAACCAGCCTACCAGCTGAGCTCATCACTACAATAGAAGTGAAGACTAAGAATAGCTACCAGTGGCTACCACTTCAGACATATGTTACCATCTCAAAGCATTTCACGGTCAAAGCTAAGGGAATCAGATTTTATGCAACAGTTAATGAATGCAATACTGCTATGCAACGGCTGTTTTATCATGGTGGAGGAGAGCAAGATGCCATTTTGACAGTGACATTGAATGACCTGGGAAACTATGGGTGTTATTGTAACTGTTCCGAAAAGATATCAGTGCCCTTACTTGCTGAGGCTTCTGTTAATCTAATAAGAAGAAGGCCGATGAGTTCACTTGTGTCTCGTGGCTTAGGATCAGCTATTGTCATCGAGTCCATTATAGTGTTTTCACTGGGAGCAGCACTAATGTTTTTCACATGCAAATGTGCAACTATTCTTGTAAATGAAAGAAGAAACAGAGCTTCCAGGACTCCAGCTGTCCCAGCAAATGCACATAGTTTCGGCAAAGGAACTTGGAGTAAAAGTTTTCCAGAGAACGCAACTCACCTTACTGCGTCTTGTTCAAGTCCCCTGCTTGGCAGCCAACGTCCCAACTTTCGACAACGGTCCTGCCGTCAATCTAGAAATGGGGAATCAAGCAAGGCAGCATATAAGGCTACTGGTGAACGCATTCAGCAGAATCCTGCGATTAGTTTTAAGCCCTTTTGTGTTGAGAAGGAATAA

Protein Analysis

1114

Amino Acids

123.31

Weight (kDa)

5.18

Isoelectric Point (pI)

35.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ig_GEX2_N PF23616 32 - 130 5e-30 GEX2 N-terminal Ig-like domain
Ig_GEX2_N PF23616 138 - 243 3.3e-35 GEX2 N-terminal Ig-like domain
Filamin PF00630 531 - 583 3.5e-06 Filamin/ABP280 repeat
Big_9 PF17963 594 - 676 1.3e-12 Bacterial Ig domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1389, 1947
AasI GACNNNNNNGTC 1 cut(s) 862
Acc16I TGCGCA 1 cut(s) 2178
Acc36I ACCTGC 1 cut(s) 1249
AccB7I CCANNNNNTGG 2 cut(s) 1901, 2108
AccI GTMKAC 2 cut(s) 1761, 1937
AciI CCGC 3 cut(s) 86, 902, 2297
AclWI GGATC 3 cut(s) 1463, 2435, 2983
AcoI YGGCCR 1 cut(s) 1842
AcsI RAATTY 9 cut(s) 641, 859, 909, 1097, 1280, 1312, 1392, 1493, 2105
AcuI CTGAAG 3 cut(s) 1315, 2106, 2684
AfaI GTAC 7 cut(s) 477, 540, 1264, 1671, 1979, 2252, 2333
AfiI CCNNNNNNNGG 6 cut(s) 1247, 1750, 1901, 2108, 2587, 3197
AflII CTTAAG 1 cut(s) 2318
AflIII ACRYGT 1 cut(s) 333
AhlI ACTAGT 1 cut(s) 287
AjnI CCWGG 7 cut(s) 394, 733, 940, 1894, 2566, 2853, 3086
Alw21I GWGCWC 3 cut(s) 169, 466, 2649
Alw26I GTCTC 6 cut(s) 273, 657, 848, 2205, 2538, 2967
AlwI GGATC 3 cut(s) 1463, 2435, 2983
AlwNI CAGNNNCTG 1 cut(s) 557
Ama87I CYCGRG 1 cut(s) 1544
AoxI GGCC 3 cut(s) 1429, 1842, 2942
ApeKI GCWGC 6 cut(s) 83, 2009, 2012, 3020, 3201, 3266
ApoI RAATTY 9 cut(s) 641, 859, 909, 1097, 1280, 1312, 1392, 1493, 2105
AseI ATTAAT 2 cut(s) 1521, 2097
Asp700I GAANNNNTTC 5 cut(s) 200, 299, 1776, 1966, 3291
AspLEI GCGC 1 cut(s) 2179
AspS9I GGNCC 4 cut(s) 349, 737, 1238, 3228
AsuC2I CCSGG 1 cut(s) 322
AsuHPI GGTGA 7 cut(s) 592, 739, 775, 1284, 2029, 3158, 3296
AvaI CYCGRG 1 cut(s) 1544
AvaII GGWCC 4 cut(s) 349, 737, 1238, 3228
BaeGI GKGCMC 1 cut(s) 2904
BalI TGGCCA 1 cut(s) 1844
BanII GRGCYC 2 cut(s) 2229, 2649
BarI GAAGNNNNNNTAC 2 cut(s) 468, 500
BauI CACGAG 2 cut(s) 446, 2964
BbsI GAAGAC 1 cut(s) 2675
Bbv12I GWGCWC 3 cut(s) 169, 466, 2649
BbvCI CCTCAGC 1 cut(s) 2913
BbvI GCAGC 6 cut(s) 95, 1996, 1999, 3032, 3213, 3278
BceAI ACGGC 5 cut(s) 1095, 1416, 2014, 2810, 3219
BcgI CGANNNNNNTGC 4 cut(s) 72, 106, 2194, 2228
BciT130I CCWGG 7 cut(s) 396, 735, 942, 1896, 2568, 2855, 3088
BcnI CCSGG 1 cut(s) 322
BcoDI GTCTC 6 cut(s) 273, 657, 848, 2205, 2538, 2967
BcuI ACTAGT 1 cut(s) 287
BfaI CTAG 5 cut(s) 288, 471, 1595, 1872, 3243
BfmI CTRYAG 2 cut(s) 246, 1762
BfrI CTTAAG 1 cut(s) 2318
BfuAI ACCTGC 1 cut(s) 1249
BglII AGATCT 2 cut(s) 529, 2551
BisI GCNGC 7 cut(s) 84, 903, 2010, 2013, 3021, 3202, 3267
BlpI GCTNAGC 1 cut(s) 2643
BlsI GCNGC 7 cut(s) 85, 904, 2011, 2014, 3022, 3203, 3268
BmcAI AGTACT 1 cut(s) 2333
Bme1390I CCNGG 8 cut(s) 322, 396, 735, 942, 1896, 2568, 2855, 3088
Bme18I GGWCC 4 cut(s) 349, 737, 1238, 3228
BmeT110I CYCGRG 1 cut(s) 1544
BmgT120I GGNCC 4 cut(s) 349, 737, 1238, 3228
BmiI GGNNCC 7 cut(s) 58, 617, 939, 1906, 1928, 2226, 2430
BmrFI CCNGG 8 cut(s) 322, 396, 735, 942, 1896, 2568, 2855, 3088
BmrI ACTGGG 1 cut(s) 3023
BmsI GCATC 6 cut(s) 168, 484, 996, 1108, 2196, 2815
BmuI ACTGGG 1 cut(s) 3023
BoxI GACNNNNGTC 1 cut(s) 3226
BpiI GAAGAC 1 cut(s) 2675
BplI GAGNNNNNCTC 2 cut(s) 2144, 2176
BpmI CTGGAG 3 cut(s) 681, 1122, 3078
Bpu10I CCTNAGC 4 cut(s) 1683, 2742, 2913, 2971
Bpu1102I GCTNAGC 1 cut(s) 2643
BpuEI CTTGAG 2 cut(s) 450, 1230
BpuMI CCSGG 1 cut(s) 322
Bsa29I ATCGAT 1 cut(s) 342
BsaBI GATNNNNATC 2 cut(s) 812, 1122
BsaI GGTCTC 3 cut(s) 273, 657, 2538
BsaJI CCNNGG 6 cut(s) 395, 733, 1077, 1503, 2566, 2854
BsaWI WCCGGW 1 cut(s) 1932
BsaXI ACNNNNNCTCC 4 cut(s) 1805, 1835, 3130, 3160
Bsc4I CCNNNNNNNGG 6 cut(s) 1247, 1750, 1901, 2108, 2587, 3197
Bse118I RCCGGY 1 cut(s) 137
Bse1I ACTGG 7 cut(s) 522, 1066, 1139, 2417, 2686, 3018, 3286
Bse3DI GCAATG 2 cut(s) 579, 1039
Bse8I GATNNNNATC 2 cut(s) 812, 1122
BseBI CCWGG 7 cut(s) 396, 735, 942, 1896, 2568, 2855, 3088
BseCI ATCGAT 1 cut(s) 342
BseDI CCNNGG 6 cut(s) 395, 733, 1077, 1503, 2566, 2854
BseGI GGATG 6 cut(s) 391, 438, 499, 1822, 2040, 2266
BseJI GATNNNNATC 2 cut(s) 812, 1122
BseLI CCNNNNNNNGG 6 cut(s) 1247, 1750, 1901, 2108, 2587, 3197
BseMI GCAATG 2 cut(s) 579, 1039
BseMII CTCAG 5 cut(s) 63, 1116, 2454, 2634, 2904
BseNI ACTGG 7 cut(s) 522, 1066, 1139, 2417, 2686, 3018, 3286
BseRI GAGGAG 3 cut(s) 1919, 2280, 2829
BseSI GKGCMC 1 cut(s) 2904
BseXI GCAGC 6 cut(s) 95, 1996, 1999, 3032, 3213, 3278
BseYI CCCAGC 1 cut(s) 3103
BsgI GTGCAG 1 cut(s) 1217
BshFI GGCC 3 cut(s) 1431, 1844, 2944
BshVI ATCGAT 1 cut(s) 342
BsiHKAI GWGCWC 3 cut(s) 169, 466, 2649
BsiHKCI CYCGRG 1 cut(s) 1544
BsiSI CCGG 3 cut(s) 138, 321, 1933
BslFI GGGAC 5 cut(s) 1419, 2200, 3086, 3174, 3195
BslI CCNNNNNNNGG 6 cut(s) 1247, 1750, 1901, 2108, 2587, 3197
BsmAI GTCTC 6 cut(s) 273, 657, 848, 2205, 2538, 2967
BsmBI CGTCTC 1 cut(s) 848
BsmFI GGGAC 5 cut(s) 1419, 2200, 3086, 3174, 3195
BsmI GAATGC 4 cut(s) 5, 202, 2780, 3291
BsnI GGCC 3 cut(s) 1431, 1844, 2944
Bso31I GGTCTC 3 cut(s) 273, 657, 2538
BsoBI CYCGRG 1 cut(s) 1544
Bsp1286I GDGCHC 5 cut(s) 169, 466, 2229, 2649, 2904
Bsp1407I TGTACA 3 cut(s) 1669, 1977, 2250
Bsp1720I GCTNAGC 1 cut(s) 2643
BspACI CCGC 3 cut(s) 86, 902, 2297
BspANI GGCC 3 cut(s) 1431, 1844, 2944
BspCNI CTCAG 5 cut(s) 62, 1115, 2455, 2635, 2905
BspDI ATCGAT 1 cut(s) 342
BspLI GGNNCC 7 cut(s) 58, 617, 939, 1906, 1928, 2226, 2430
BspMI ACCTGC 1 cut(s) 1249
BspPI GGATC 3 cut(s) 1463, 2435, 2983
BspTI CTTAAG 1 cut(s) 2318
BspTNI GGTCTC 3 cut(s) 273, 657, 2538
BsrDI GCAATG 2 cut(s) 579, 1039
BsrFI RCCGGY 1 cut(s) 137
BsrGI TGTACA 3 cut(s) 1669, 1977, 2250
BsrI ACTGG 7 cut(s) 522, 1066, 1139, 2417, 2686, 3018, 3286
BssAI RCCGGY 1 cut(s) 137
BssECI CCNNGG 6 cut(s) 395, 733, 1077, 1503, 2566, 2854
BssNAI GTATAC 1 cut(s) 1938
BssSI CACGAG 2 cut(s) 446, 2964
BssT1I CCWWGG 1 cut(s) 1503
Bst1107I GTATAC 1 cut(s) 1938
Bst2BI CACGAG 2 cut(s) 446, 2964
Bst2UI CCWGG 7 cut(s) 396, 735, 942, 1896, 2568, 2855, 3088
BstAFI CTTAAG 1 cut(s) 2318
BstAUI TGTACA 3 cut(s) 1669, 1977, 2250
BstC8I GCNNGC 4 cut(s) 139, 586, 1741, 2079
BstDSI CCRYGG 1 cut(s) 1077
BstEII GGTNACC 2 cut(s) 842, 2626
BstENI CCTNNNNNAGG 1 cut(s) 1245
BstF5I GGATG 6 cut(s) 391, 438, 499, 1822, 2040, 2266
BstHHI GCGC 1 cut(s) 2179
BstMAI GTCTC 6 cut(s) 273, 657, 848, 2205, 2538, 2967
BstMWI GCNNNNNNNGC 3 cut(s) 705, 3104, 3275
BstNI CCWGG 7 cut(s) 396, 735, 942, 1896, 2568, 2855, 3088
BstNSI RCATGY 2 cut(s) 680, 3042
BstPAI GACNNNNGTC 1 cut(s) 3226
BstPI GGTNACC 2 cut(s) 842, 2626
BstSCI CCNGG 8 cut(s) 320, 394, 733, 940, 1894, 2566, 2853, 3086
BstSFI CTRYAG 2 cut(s) 246, 1762
BstSLI GKGCMC 1 cut(s) 2904
BstV1I GCAGC 6 cut(s) 95, 1996, 1999, 3032, 3213, 3278
BstV2I GAAGAC 1 cut(s) 2675
BstX2I RGATCY 2 cut(s) 529, 2551
BstXI CCANNNNNNTGG 2 cut(s) 760, 789
BstYI RGATCY 2 cut(s) 529, 2551
BstZ17I GTATAC 1 cut(s) 1938
Bsu15I ATCGAT 1 cut(s) 342
BsuRI GGCC 3 cut(s) 1431, 1844, 2944
BsuTUI ATCGAT 1 cut(s) 342
BtgI CCRYGG 1 cut(s) 1077
BtsCI GGATG 6 cut(s) 391, 438, 499, 1822, 2040, 2266
BtsI GCAGTG 1 cut(s) 2299
BveI ACCTGC 1 cut(s) 1249
Cac8I GCNNGC 4 cut(s) 139, 586, 1741, 2079
CaiI CAGNNNCTG 1 cut(s) 557
CfoI GCGC 1 cut(s) 2179
Cfr10I RCCGGY 1 cut(s) 137
Cfr13I GGNCC 4 cut(s) 349, 737, 1238, 3228
ClaI ATCGAT 1 cut(s) 342
CseI GACGC 1 cut(s) 3165
Csp6I GTAC 7 cut(s) 476, 539, 1263, 1670, 1978, 2251, 2332
CspCI CAANNNNNGTGG 4 cut(s) 593, 628, 1216, 1251
CviQI GTAC 7 cut(s) 476, 539, 1263, 1670, 1978, 2251, 2332
DraI TTTAAA 1 cut(s) 1068
DrdI GACNNNNNNGTC 1 cut(s) 862
DseDI GACNNNNNNGTC 1 cut(s) 862
EaeI YGGCCR 1 cut(s) 1842
Ecl136II GAGCTC 1 cut(s) 2647
Eco130I CCWWGG 1 cut(s) 1503
Eco24I GRGCYC 2 cut(s) 2229, 2649
Eco31I GGTCTC 3 cut(s) 273, 657, 2538
Eco32I GATATC 1 cut(s) 2895
Eco47I GGWCC 4 cut(s) 349, 737, 1238, 3228
Eco53kI GAGCTC 1 cut(s) 2647
Eco57I CTGAAG 3 cut(s) 1315, 2106, 2684
Eco88I CYCGRG 1 cut(s) 1544
Eco91I GGTNACC 2 cut(s) 842, 2626
EcoICRI GAGCTC 1 cut(s) 2647
EcoNI CCTNNNNNAGG 1 cut(s) 1245
EcoO109I RGGNCCY 1 cut(s) 737
EcoO65I GGTNACC 2 cut(s) 842, 2626
EcoRI GAATTC 3 cut(s) 641, 909, 1097
EcoRII CCWGG 7 cut(s) 394, 733, 940, 1894, 2566, 2853, 3086
EcoRV GATATC 1 cut(s) 2895
EcoT14I CCWWGG 1 cut(s) 1503
EcoT22I ATGCAT 2 cut(s) 499, 790
EcoT38I GRGCYC 2 cut(s) 2229, 2649
ErhI CCWWGG 1 cut(s) 1503
Esp3I CGTCTC 1 cut(s) 848
FalI AAGNNNNNCTT 2 cut(s) 287, 319
FaqI GGGAC 5 cut(s) 1419, 2200, 3086, 3174, 3195
FauNDI CATATG 2 cut(s) 1003, 2707
FblI GTMKAC 2 cut(s) 1761, 1937
Fnu4HI GCNGC 7 cut(s) 84, 903, 2010, 2013, 3021, 3202, 3267
FokI GGATG 6 cut(s) 378, 445, 506, 1829, 2027, 2273
FriOI GRGCYC 2 cut(s) 2229, 2649
Fsp4HI GCNGC 7 cut(s) 84, 903, 2010, 2013, 3021, 3202, 3267
FspBI CTAG 5 cut(s) 288, 471, 1595, 1872, 3243
FspI TGCGCA 1 cut(s) 2178
GlaI GCGC 1 cut(s) 2178
GluI GCNGC 7 cut(s) 84, 903, 2010, 2013, 3021, 3202, 3267
GsaI CCCAGC 1 cut(s) 3107
GsuI CTGGAG 3 cut(s) 681, 1122, 3078
HaeIII GGCC 3 cut(s) 1431, 1844, 2944
HapII CCGG 3 cut(s) 138, 321, 1933
HgaI GACGC 1 cut(s) 3165
HhaI GCGC 1 cut(s) 2179
Hin6I GCGC 1 cut(s) 2177
HinP1I GCGC 1 cut(s) 2177
HindIII AAGCTT 3 cut(s) 62, 185, 296
HpaII CCGG 3 cut(s) 138, 321, 1933
HphI GGTGA 7 cut(s) 592, 739, 775, 1284, 2029, 3158, 3296
Hpy188III TCNNGA 7 cut(s) 743, 878, 935, 1219, 1324, 3152, 3243
HpyAV CCTTC 9 cut(s) 269, 484, 677, 1299, 1917, 2081, 2266, 2934, 3331
HpyCH4IV ACGT 3 cut(s) 333, 1729, 3208
HpyF10VI GCNNNNNNNGC 3 cut(s) 705, 3104, 3275
HpySE526I ACGT 3 cut(s) 333, 1729, 3208
HspAI GCGC 1 cut(s) 2177
KroI GCCGGC 1 cut(s) 137
KroNI GCCGGC 1 cut(s) 139
LmnI GCTCC 7 cut(s) 62, 1079, 1291, 1326, 1932, 2224, 3017
Lsp1109I GCAGC 6 cut(s) 95, 1996, 1999, 3032, 3213, 3278
LweI GCATC 6 cut(s) 168, 484, 996, 1108, 2196, 2815
MaeI CTAG 5 cut(s) 288, 471, 1595, 1872, 3243
MaeII ACGT 3 cut(s) 333, 1729, 3208
MaeIII GTNAC 8 cut(s) 842, 1572, 2339, 2496, 2626, 2710, 2839, 2876
MboII GAAGA 7 cut(s) 539, 905, 2546, 2587, 2680, 2949, 3084
MfeI CAATTG 2 cut(s) 754, 1824
MflI RGATCY 2 cut(s) 529, 2551
MhlI GDGCHC 5 cut(s) 169, 466, 2229, 2649, 2904
MlsI TGGCCA 1 cut(s) 1844
MluNI TGGCCA 1 cut(s) 1844
MlyI GAGTC 4 cut(s) 1178, 1829, 3002, 3085
MmeI TCCRAC 5 cut(s) 72, 272, 593, 1672, 2166
Mox20I TGGCCA 1 cut(s) 1844
Mph1103I ATGCAT 2 cut(s) 499, 790
MroNI GCCGGC 1 cut(s) 137
MroXI GAANNNNTTC 5 cut(s) 200, 299, 1776, 1966, 3291
MscI TGGCCA 1 cut(s) 1844
MslI CAYNNNNRTG 3 cut(s) 570, 3002, 3043
Msp20I TGGCCA 1 cut(s) 1844
MspA1I CMGCKG 4 cut(s) 86, 916, 2642, 3098
MspCI CTTAAG 1 cut(s) 2318
MspI CCGG 3 cut(s) 138, 321, 1933
MspR9I CCNGG 8 cut(s) 322, 396, 735, 942, 1896, 2568, 2855, 3088
MunI CAATTG 2 cut(s) 754, 1824
Mva1269I GAATGC 4 cut(s) 5, 202, 2780, 3291
MvaI CCWGG 7 cut(s) 396, 735, 942, 1896, 2568, 2855, 3088
MwoI GCNNNNNNNGC 3 cut(s) 705, 3104, 3275
NaeI GCCGGC 1 cut(s) 139
NciI CCSGG 1 cut(s) 322
NdeI CATATG 2 cut(s) 1003, 2707
NgoMIV GCCGGC 1 cut(s) 137
NlaIV GGNNCC 7 cut(s) 58, 617, 939, 1906, 1928, 2226, 2430
NmuCI GTSAC 3 cut(s) 1572, 2496, 2839
NsbI TGCGCA 1 cut(s) 2178
NsiI ATGCAT 2 cut(s) 499, 790
NspI RCATGY 2 cut(s) 680, 3042
PcsI WCGNNNNNNNCGW 2 cut(s) 339, 3232
PctI GAATGC 4 cut(s) 5, 202, 2780, 3291
PdiI GCCGGC 1 cut(s) 139
PdmI GAANNNNTTC 5 cut(s) 200, 299, 1776, 1966, 3291
PfeI GAWTC 8 cut(s) 368, 575, 1550, 1967, 2576, 2748, 3254, 3301
PflMI CCANNNNNTGG 2 cut(s) 1901, 2108
PfoI TCCNGGA 1 cut(s) 3086
PkrI GCNGC 7 cut(s) 85, 904, 2011, 2014, 3022, 3203, 3268
PleI GAGTC 4 cut(s) 1178, 1828, 3001, 3085
PpsI GAGTC 4 cut(s) 1178, 1828, 3001, 3085
PpuMI RGGWCCY 1 cut(s) 737
PshAI GACNNNNGTC 1 cut(s) 3226
PshBI ATTAAT 2 cut(s) 1521, 2097
PsiI TTATAA 2 cut(s) 1389, 1947
Psp124BI GAGCTC 1 cut(s) 2649
Psp5II RGGWCCY 1 cut(s) 737
Psp6I CCWGG 7 cut(s) 394, 733, 940, 1894, 2566, 2853, 3086
PspEI GGTNACC 2 cut(s) 842, 2626
PspFI CCCAGC 1 cut(s) 3103
PspGI CCWGG 7 cut(s) 394, 733, 940, 1894, 2566, 2853, 3086
PspN4I GGNNCC 7 cut(s) 58, 617, 939, 1906, 1928, 2226, 2430
PspPI GGNCC 4 cut(s) 349, 737, 1238, 3228
PspPPI RGGWCCY 1 cut(s) 737
PsrI GAACNNNNNNTAC 2 cut(s) 243, 275
PstNI CAGNNNCTG 1 cut(s) 557
PsuI RGATCY 2 cut(s) 529, 2551
PvuII CAGCTG 3 cut(s) 916, 2642, 3098
RsaI GTAC 7 cut(s) 477, 540, 1264, 1671, 1979, 2252, 2333
RsaNI GTAC 7 cut(s) 476, 539, 1263, 1670, 1978, 2251, 2332
RseI CAYNNNNRTG 3 cut(s) 570, 3002, 3043
SacI GAGCTC 1 cut(s) 2649
SatI GCNGC 7 cut(s) 84, 903, 2010, 2013, 3021, 3202, 3267
Sau96I GGNCC 4 cut(s) 349, 737, 1238, 3228
ScaI AGTACT 1 cut(s) 2333
SchI GAGTC 4 cut(s) 1178, 1829, 3002, 3085
ScrFI CCNGG 8 cut(s) 322, 396, 735, 942, 1896, 2568, 2855, 3088
SduI GDGCHC 5 cut(s) 169, 466, 2229, 2649, 2904
SfaNI GCATC 6 cut(s) 168, 484, 996, 1108, 2196, 2815
SfcI CTRYAG 2 cut(s) 246, 1762
SinI GGWCC 4 cut(s) 349, 737, 1238, 3228
SmiMI CAYNNNNRTG 3 cut(s) 570, 3002, 3043
SmlI CTYRAG 3 cut(s) 465, 1245, 2318
SmoI CTYRAG 3 cut(s) 465, 1245, 2318
SpeI ACTAGT 1 cut(s) 287
SsiI CCGC 3 cut(s) 86, 902, 2297
SspI AATATT 3 cut(s) 1414, 1775, 2170
SspMI CTAG 5 cut(s) 288, 471, 1595, 1872, 3243
SstI GAGCTC 1 cut(s) 2649
StyD4I CCNGG 8 cut(s) 320, 394, 733, 940, 1894, 2566, 2853, 3086
StyI CCWWGG 1 cut(s) 1503
TaiI ACGT 3 cut(s) 336, 1732, 3211
TaqI TCGA 5 cut(s) 342, 1149, 1202, 2991, 3220
TaqII GACCGA 1 cut(s) 2578
TatI WGTACW 5 cut(s) 475, 1669, 1977, 2250, 2331
TauI GCSGC 1 cut(s) 905
TfiI GAWTC 8 cut(s) 368, 575, 1550, 1967, 2576, 2748, 3254, 3301
TseFI GTSAC 3 cut(s) 1572, 2496, 2839
TseI GCWGC 6 cut(s) 83, 2009, 2012, 3020, 3201, 3266
Tsp45I GTSAC 3 cut(s) 1572, 2496, 2839
Van91I CCANNNNNTGG 2 cut(s) 1901, 2108
Vha464I CTTAAG 1 cut(s) 2318
VpaK11BI GGWCC 4 cut(s) 349, 737, 1238, 3228
VspI ATTAAT 2 cut(s) 1521, 2097
XagI CCTNNNNNAGG 1 cut(s) 1245
XapI RAATTY 9 cut(s) 641, 859, 909, 1097, 1280, 1312, 1392, 1493, 2105
XbaI TCTAGA 1 cut(s) 3242
XceI RCATGY 2 cut(s) 680, 3042
XcmI CCANNNNNNNNNTGG 1 cut(s) 1226
XmiI GTMKAC 2 cut(s) 1761, 1937
XmnI GAANNNNTTC 5 cut(s) 200, 299, 1776, 1966, 3291
XspI CTAG 5 cut(s) 288, 471, 1595, 1872, 3243
ZrmI AGTACT 1 cut(s) 2333
Zsp2I ATGCAT 2 cut(s) 499, 790
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.