Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0004455

Physical Location & Seq

Genomic Coordinates Forward (+)

51303524 .. 51307916

Gene Structure 4393 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG258700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2574 bp

ATGGAAATCTTTATATACCAGCAAGATCAATATGGTAACCTTGTTCCAGGACTATATGAATTTGATGCTGAAGTTGTTGAGACAGAGACGAATTTGTCAATACCTGTTCCAGATTTGCACTTTGAAGAAGTGGCGGCTGGAATTCAGCTGTTTTCTTTTACTAATCTGGAACCAGGCAACTTTTTGCTGACTATATCAGATATGAAGCATGATAAAAGCATCTCTAATATGCCATATGCTTATACCGTCTTTGTTGGCTATTGCAATGGGATAAACAGTGTTGTTAATGGAACTGGTTTAAATAGCTCCGTGGCAGGAGAAAGATCAGAATTCTCAGTTTATTTGAATGATGCTTATCAAAATCCCTCTCCAGTTGAAATCGAAAGGCTTGAAATACAAATTGTAAGGGAAATTGACTCCTATCATGTGCAGTCGAGCATATTTCCTATCCAGATCATCAATGGGAGTGGACCTGCACAAGGAATAAGATATGGTACAACCAGCCAAATAGAATTTGCTCCTTCACCATCTATGACCTTGACAAATTCTACTGTCGGGAGCTTCAGCACTCTGGCAACTGCTCTCAATGTGGTATATACACCTGACAAGAGTGGGATTTATAAAATTTATGTGTTTTGTGGAAATATTTTGCTGAATGGAGGCCGTCCCTTTGATAAGGAAGTTATAGCAGGGAGTGTTGATCCATCATGCTCAACAGTTGTCAAATTTTCTCCCAAGGTGGCAAGGACGATTAATAATGAAGTAGTAGTGAAGCTCGGGGATTCATTTTTCAATCCCGTCTTGTCACAACAATCTGGGCTGAAACTAGAGATTGTTTCTGTAAACAGTTCTGGCTTTTCAAGTTCCTTGTTTGTGGACAATAATGATGGGTCATACACTGTACAATATCTGGCTAAGGAGGTTGGAACTTATGAGATGTGTGCTTCATTTGATGGCAAACGTATTTCTGCCTGCCCCTTTGGGGTCAATGTCTACAGTAGCGAATATTTTCCCAGAGCCGAAAATGATACAATTTCTGTGTGGGAGGATGAGTCAATTGCTTTTGATGTTTTGGCCAATGACTACTTTGCTGGAAATAATGCTAGTGTTGTTGAGTTCTCCAAGCCAGGTCATGGTTCCCTTATTGAGTATGGAAGGCTCCTCCGGTATACACCTTATAAAGACTATTATGGAAATGATTCCTTTGTGTACACAATGTCTGATATAAACGGCAATCTTGCTGCTGCTTTTGTAAACATATCTGTTCTCACCATCCCACCACAATTTGTTTCTTTTCCAAGTGAATTGCAAGCTACTGAAGGCGAGATTAATCCAAAATTTGGTGGTTTCTCTGGGTTTATGATAAGATATTCCGACATGATGGAGAACATCTCTGTTAATCTTAGTGCACAATCTGGGACAGTATTTCTGTCTCCGATGCTAATGCAATTCTGGGAGCCCATTTGGAATGGACTTTCTGTGTACAAAGAGGATGGAGGAGTGAAGGGGTTGATATTACAAGGCAGTGTGGAAGTAATCAATTTTGCCCTTAAGTCAATACAGTACTATGGTAACGAGAACTTCTGTGGCTATGATACCATTCGGCTCACTACGAGGAATAGGAATGGAGTAAATGACTTGCATATTCCAGTTTTTGTGGAACCTATTAATGATCCTCCCTTTATTCATGCACCTGAGTTTATCATTCTGAAAAGTAATGAAAATGGGTCACTGATATATGACAGAGAAACAGACAAGTTTGAGTTCTATATTGGAGACCCAGATCTTCTTGCGTTCCCTGGTAATGAATCCCTTTTTTCGGTCATCTTCTCTATGGAAGTTAATGATGGATATTTGGTAACCAGCCTACCAGCTGAGCTCATCACTACAATAGAAGTGAAGACTAAGAATAGCTACCAGTGGCTACCACTTCAGACATATGTTACCATCTCAAAGCATTTTACGGTCAAAGCTAAGGGAATTAGATTTTATGCAACAGTTAATGAATGCAATACTGCCATGCAACAGCTGTTTTATCATGGTGGAGAGCAAGATGCCATTTTGACAGTGACATTGAATGACCTGGGAAACTATGGCTGTTATTGTAACTGTTCCGAAAAGATATCAGTGCCCTTACTTGCTGAGGCTTCTGTTAATCTAATAAGAAGAAGGCAGATGAGTTCACTTGTGTCTCGTGGCTTAGGATCAGCTATTGTCATCGAGTCCATTATAGTGTTTTCACTGGGAGCAGCACTAATGTTTTTCACATGCAAATGTGCAACTATCCTTGTAAATGAAAGAAGAAACAGAGCTACCAAGACTCCAGCTGACCCAGCAAGTGCACATAGTTTGGGCAAAGGAACTTCGGGTAAAAGTTTGCCAGAGAACGCAACTCACCTTACTGCGTCTTGTTCAAGTCCCCTGCTTGGCAGCCAACGTCCCAACTTTCGACAACGGTCCTGCCGTCAATCTGGAAATGGGGAATCAAGCAAGGCAGCATATACGGCTACTGGTGAACGCATTCAGCAGAATCTTGCGCCTAGTTTTAAGCCCTTTTGTGTTGAGAAGGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009987 GO:0016020 GO:0016021 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051704 GO:0055046 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Filamin

Protein Analysis

857

Amino Acids

94.37

Weight (kDa)

4.9

Isoelectric Point (pI)

39.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Filamin	PF00630	275 - 327	2.5e-06	Filamin/ABP280 repeat
Big_9	PF17963	338 - 420	9.1e-13	Bacterial Ig domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004455)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150
fragaria_vesca	FvH4_4g18570
prunus_persica	Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1
pyrus_communis	pycom16g14000 pycom16g14010
rosa_chinensis	RchiOBHm_Chr4g0423171
rosa_laevigata	RLG00000007579
rosa_multiflora	Rmu_sc0000744.1_g000001 Rmu_sc0008829.1_g000002 Rmu_sc0020601.1_g000001
rosa_roxburghii	Rroxscaffold_5G00365330
rosa_rugosa	Rorug04G0184800 Rorug04G0184900
rosa_samantha	Rh4AG244300 Rh4AG244400 Rh4BG249500 Rh4BG249600 Rh4CG258600 Rh4CG258700 Rh4DG244300 Rh4DG244400
rosa_wichuraiana	Rw4G021050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	621, 1179
AasI	GACNNNNNNGTC	1 cut(s)	94
Acc36I	ACCTGC	1 cut(s)	481
AccB7I	CCANNNNNTGG	2 cut(s)	1133, 1340
AccI	GTMKAC	2 cut(s)	993, 1169
AciI	CCGC	1 cut(s)	134
AclWI	GGATC	3 cut(s)	695, 1667, 2212
AcoI	YGGCCR	1 cut(s)	1074
AcsI	RAATTY	9 cut(s)	59, 91, 141, 329, 512, 544, 624, 725, 1337
AcuI	CTGAAG	4 cut(s)	90, 547, 1338, 1916
AfaI	GTAC	5 cut(s)	496, 903, 1211, 1484, 1565
AfiI	CCNNNNNNNGG	6 cut(s)	479, 982, 1133, 1340, 1819, 2426
AflII	CTTAAG	1 cut(s)	1550
AgsI	TTSAA	8 cut(s)	125, 346, 377, 392, 793, 861, 2077, 2415
AjnI	CCWGG	5 cut(s)	46, 172, 1126, 1798, 2082
Alw21I	GWGCWC	3 cut(s)	1411, 1881, 2344
Alw26I	GTCTC	5 cut(s)	74, 80, 1437, 1770, 2196
Alw44I	GTGCAC	2 cut(s)	1407, 2340
AlwI	GGATC	3 cut(s)	695, 1667, 2212
Ama87I	CYCGRG	1 cut(s)	776
AoxI	GGCC	2 cut(s)	661, 1074
ApaLI	GTGCAC	2 cut(s)	1407, 2340
ApeKI	GCWGC	5 cut(s)	1241, 1244, 2249, 2430, 2495
ApoI	RAATTY	9 cut(s)	59, 91, 141, 329, 512, 544, 624, 725, 1337
AseI	ATTAAT	3 cut(s)	753, 1329, 1668
Asp700I	GAANNNNTTC	3 cut(s)	1008, 1198, 2520
AspLEI	GCGC	1 cut(s)	2539
AspS9I	GGNCC	2 cut(s)	470, 2457
AsuHPI	GGTGA	4 cut(s)	516, 1261, 2387, 2525
AvaI	CYCGRG	1 cut(s)	776
AvaII	GGWCC	2 cut(s)	470, 2457
BaeGI	GKGCMC	3 cut(s)	1411, 2133, 2344
BalI	TGGCCA	1 cut(s)	1076
BanII	GRGCYC	2 cut(s)	1461, 1881
BauI	CACGAG	1 cut(s)	2193
BbsI	GAAGAC	1 cut(s)	1907
Bbv12I	GWGCWC	3 cut(s)	1411, 1881, 2344
BbvCI	CCTCAGC	1 cut(s)	2142
BbvI	GCAGC	5 cut(s)	1228, 1231, 2261, 2442, 2507
BccI	CCATC	9 cut(s)	535, 712, 881, 947, 1280, 1375, 1487, 1841, 1955
BceAI	ACGGC	4 cut(s)	648, 1246, 2448, 2520
BcgI	CGANNNNNNTGC	2 cut(s)	1426, 1460
BciT130I	CCWGG	5 cut(s)	48, 174, 1128, 1800, 2084
BcoDI	GTCTC	5 cut(s)	74, 80, 1437, 1770, 2196
BfaI	CTAG	3 cut(s)	827, 1104, 2541
BfmI	CTRYAG	1 cut(s)	994
BfrI	CTTAAG	1 cut(s)	1550
BfuAI	ACCTGC	1 cut(s)	481
BglII	AGATCT	1 cut(s)	1783
BisI	GCNGC	6 cut(s)	135, 1242, 1245, 2250, 2431, 2496
BlpI	GCTNAGC	1 cut(s)	1875
BlsI	GCNGC	6 cut(s)	136, 1243, 1246, 2251, 2432, 2497
BmcAI	AGTACT	1 cut(s)	1565
Bme1390I	CCNGG	5 cut(s)	48, 174, 1128, 1800, 2084
Bme18I	GGWCC	2 cut(s)	470, 2457
BmeT110I	CYCGRG	1 cut(s)	776
BmgT120I	GGNCC	2 cut(s)	470, 2457
BmiI	GGNNCC	5 cut(s)	171, 1138, 1160, 1458, 1662
BmrFI	CCNGG	5 cut(s)	48, 174, 1128, 1800, 2084
BmrI	ACTGGG	1 cut(s)	2252
BmsI	GCATC	5 cut(s)	55, 228, 340, 1428, 2044
BmuI	ACTGGG	1 cut(s)	2252
BoxI	GACNNNNGTC	1 cut(s)	2455
BpiI	GAAGAC	1 cut(s)	1907
BplI	GAGNNNNNCTC	2 cut(s)	1376, 1408
BpmI	CTGGAG	2 cut(s)	354, 2307
Bpu10I	CCTNAGC	4 cut(s)	915, 1974, 2142, 2200
Bpu1102I	GCTNAGC	1 cut(s)	1875
BsaBI	GATNNNNATC	1 cut(s)	354
BsaI	GGTCTC	1 cut(s)	1770
BsaJI	CCNNGG	4 cut(s)	309, 735, 1798, 2083
BsaWI	WCCGGW	1 cut(s)	1164
BsaXI	ACNNNNNCTCC	4 cut(s)	1037, 1067, 2305, 2335
Bsc4I	CCNNNNNNNGG	6 cut(s)	479, 982, 1133, 1340, 1819, 2426
Bse1I	ACTGG	6 cut(s)	298, 371, 1649, 1918, 2247, 2515
Bse3DI	GCAATG	1 cut(s)	271
Bse8I	GATNNNNATC	1 cut(s)	354
BseBI	CCWGG	5 cut(s)	48, 174, 1128, 1800, 2084
BseDI	CCNNGG	4 cut(s)	309, 735, 1798, 2083
BseGI	GGATG	3 cut(s)	1054, 1272, 1498
BseJI	GATNNNNATC	1 cut(s)	354
BseLI	CCNNNNNNNGG	6 cut(s)	479, 982, 1133, 1340, 1819, 2426
BseMI	GCAATG	1 cut(s)	271
BseMII	CTCAG	4 cut(s)	348, 1686, 1866, 2133
BseNI	ACTGG	6 cut(s)	298, 371, 1649, 1918, 2247, 2515
BseRI	GAGGAG	2 cut(s)	1151, 1512
BseSI	GKGCMC	3 cut(s)	1411, 2133, 2344
BseXI	GCAGC	5 cut(s)	1228, 1231, 2261, 2442, 2507
BseYI	CCCAGC	1 cut(s)	2332
BsgI	GTGCAG	2 cut(s)	449, 459
BshFI	GGCC	2 cut(s)	663, 1076
BsiHKAI	GWGCWC	3 cut(s)	1411, 1881, 2344
BsiHKCI	CYCGRG	1 cut(s)	776
BsiSI	CCGG	1 cut(s)	1165
BslFI	GGGAC	4 cut(s)	651, 1432, 2403, 2424
BslI	CCNNNNNNNGG	6 cut(s)	479, 982, 1133, 1340, 1819, 2426
BsmAI	GTCTC	5 cut(s)	74, 80, 1437, 1770, 2196
BsmBI	CGTCTC	1 cut(s)	80
BsmFI	GGGAC	4 cut(s)	651, 1432, 2403, 2424
BsmI	GAATGC	2 cut(s)	2012, 2520
BsnI	GGCC	2 cut(s)	663, 1076
Bso31I	GGTCTC	1 cut(s)	1770
BsoBI	CYCGRG	1 cut(s)	776
Bsp1286I	GDGCHC	5 cut(s)	1411, 1461, 1881, 2133, 2344
Bsp1407I	TGTACA	3 cut(s)	901, 1209, 1482
Bsp143I	GATC	7 cut(s)	25, 323, 453, 700, 1672, 1783, 2204
Bsp1720I	GCTNAGC	1 cut(s)	1875
BspACI	CCGC	1 cut(s)	134
BspANI	GGCC	2 cut(s)	663, 1076
BspCNI	CTCAG	4 cut(s)	347, 1687, 1867, 2134
BspLI	GGNNCC	5 cut(s)	171, 1138, 1160, 1458, 1662
BspMI	ACCTGC	1 cut(s)	481
BspPI	GGATC	3 cut(s)	695, 1667, 2212
BspTI	CTTAAG	1 cut(s)	1550
BspTNI	GGTCTC	1 cut(s)	1770
BsrDI	GCAATG	1 cut(s)	271
BsrGI	TGTACA	3 cut(s)	901, 1209, 1482
BsrI	ACTGG	6 cut(s)	298, 371, 1649, 1918, 2247, 2515
BssECI	CCNNGG	4 cut(s)	309, 735, 1798, 2083
BssMI	GATC	7 cut(s)	25, 323, 453, 700, 1672, 1783, 2204
BssNAI	GTATAC	1 cut(s)	1170
BssSI	CACGAG	1 cut(s)	2193
BssT1I	CCWWGG	1 cut(s)	735
Bst1107I	GTATAC	1 cut(s)	1170
Bst2BI	CACGAG	1 cut(s)	2193
Bst2UI	CCWGG	5 cut(s)	48, 174, 1128, 1800, 2084
BstAFI	CTTAAG	1 cut(s)	1550
BstAUI	TGTACA	3 cut(s)	901, 1209, 1482
BstC8I	GCNNGC	2 cut(s)	973, 1311
BstDEI	CTNAG	9 cut(s)	334, 915, 1403, 1695, 1875, 1905, 1974, 2142, 2200
BstDSI	CCRYGG	1 cut(s)	309
BstEII	GGTNACC	2 cut(s)	35, 1858
BstENI	CCTNNNNNAGG	1 cut(s)	477
BstF5I	GGATG	3 cut(s)	1054, 1272, 1498
BstHHI	GCGC	1 cut(s)	2539
BstKTI	GATC	7 cut(s)	28, 326, 456, 703, 1675, 1786, 2207
BstMAI	GTCTC	5 cut(s)	74, 80, 1437, 1770, 2196
BstMBI	GATC	7 cut(s)	25, 323, 453, 700, 1672, 1783, 2204
BstMWI	GCNNNNNNNGC	2 cut(s)	2333, 2504
BstNI	CCWGG	5 cut(s)	48, 174, 1128, 1800, 2084
BstNSI	RCATGY	1 cut(s)	2271
BstPAI	GACNNNNGTC	1 cut(s)	2455
BstPI	GGTNACC	2 cut(s)	35, 1858
BstSCI	CCNGG	5 cut(s)	46, 172, 1126, 1798, 2082
BstSFI	CTRYAG	1 cut(s)	994
BstSLI	GKGCMC	3 cut(s)	1411, 2133, 2344
BstV1I	GCAGC	5 cut(s)	1228, 1231, 2261, 2442, 2507
BstV2I	GAAGAC	1 cut(s)	1907
BstX2I	RGATCY	1 cut(s)	1783
BstYI	RGATCY	1 cut(s)	1783
BstZ17I	GTATAC	1 cut(s)	1170
BsuRI	GGCC	2 cut(s)	663, 1076
BtgI	CCRYGG	1 cut(s)	309
BtsCI	GGATG	3 cut(s)	1054, 1272, 1498
BtsI	GCAGTG	1 cut(s)	1531
BtsIMutI	CAGTG	8 cut(s)	283, 897, 1531, 1730, 1925, 2073, 2133, 2240
BveI	ACCTGC	1 cut(s)	481
Cac8I	GCNNGC	2 cut(s)	973, 1311
CfoI	GCGC	1 cut(s)	2539
Cfr13I	GGNCC	2 cut(s)	470, 2457
CseI	GACGC	1 cut(s)	2394
Csp6I	GTAC	5 cut(s)	495, 902, 1210, 1483, 1564
CspCI	CAANNNNNGTGG	2 cut(s)	448, 483
CviAII	CATG	9 cut(s)	209, 425, 708, 1133, 1378, 1688, 2020, 2039, 2268
CviQI	GTAC	5 cut(s)	495, 902, 1210, 1483, 1564
DdeI	CTNAG	9 cut(s)	334, 915, 1403, 1695, 1875, 1905, 1974, 2142, 2200
DpnI	GATC	7 cut(s)	27, 325, 455, 702, 1674, 1785, 2206
DpnII	GATC	7 cut(s)	25, 323, 453, 700, 1672, 1783, 2204
DraI	TTTAAA	1 cut(s)	300
DrdI	GACNNNNNNGTC	1 cut(s)	94
DseDI	GACNNNNNNGTC	1 cut(s)	94
EaeI	YGGCCR	1 cut(s)	1074
Ecl136II	GAGCTC	1 cut(s)	1879
Eco130I	CCWWGG	1 cut(s)	735
Eco24I	GRGCYC	2 cut(s)	1461, 1881
Eco31I	GGTCTC	1 cut(s)	1770
Eco32I	GATATC	1 cut(s)	2124
Eco47I	GGWCC	2 cut(s)	470, 2457
Eco53kI	GAGCTC	1 cut(s)	1879
Eco57I	CTGAAG	4 cut(s)	90, 547, 1338, 1916
Eco88I	CYCGRG	1 cut(s)	776
Eco91I	GGTNACC	2 cut(s)	35, 1858
EcoICRI	GAGCTC	1 cut(s)	1879
EcoNI	CCTNNNNNAGG	1 cut(s)	477
EcoO65I	GGTNACC	2 cut(s)	35, 1858
EcoRI	GAATTC	2 cut(s)	141, 329
EcoRII	CCWGG	5 cut(s)	46, 172, 1126, 1798, 2082
EcoRV	GATATC	1 cut(s)	2124
EcoT14I	CCWWGG	1 cut(s)	735
EcoT38I	GRGCYC	2 cut(s)	1461, 1881
ErhI	CCWWGG	1 cut(s)	735
Esp3I	CGTCTC	1 cut(s)	80
FaeI	CATG	9 cut(s)	212, 428, 711, 1136, 1381, 1691, 2023, 2042, 2271
FaqI	GGGAC	4 cut(s)	651, 1432, 2403, 2424
FatI	CATG	9 cut(s)	208, 424, 707, 1132, 1377, 1687, 2019, 2038, 2267
FauNDI	CATATG	2 cut(s)	235, 1939
FblI	GTMKAC	2 cut(s)	993, 1169
Fnu4HI	GCNGC	6 cut(s)	135, 1242, 1245, 2250, 2431, 2496
FokI	GGATG	3 cut(s)	1061, 1259, 1505
FriOI	GRGCYC	2 cut(s)	1461, 1881
Fsp4HI	GCNGC	6 cut(s)	135, 1242, 1245, 2250, 2431, 2496
FspBI	CTAG	3 cut(s)	827, 1104, 2541
GlaI	GCGC	1 cut(s)	2538
GluI	GCNGC	6 cut(s)	135, 1242, 1245, 2250, 2431, 2496
GsaI	CCCAGC	1 cut(s)	2336
GsuI	CTGGAG	2 cut(s)	354, 2307
HaeIII	GGCC	2 cut(s)	663, 1076
HapII	CCGG	1 cut(s)	1165
HgaI	GACGC	1 cut(s)	2394
HhaI	GCGC	1 cut(s)	2539
Hin1II	CATG	9 cut(s)	212, 428, 711, 1136, 1381, 1691, 2023, 2042, 2271
Hin6I	GCGC	1 cut(s)	2537
HinP1I	GCGC	1 cut(s)	2537
HinfI	GANTC	9 cut(s)	416, 782, 1052, 1199, 1808, 2222, 2320, 2483, 2530
HpaII	CCGG	1 cut(s)	1165
HphI	GGTGA	4 cut(s)	516, 1261, 2387, 2525
Hpy188I	TCNGA	8 cut(s)	199, 328, 1222, 1375, 1437, 1710, 1935, 2116
Hpy188III	TCNNGA	5 cut(s)	110, 167, 451, 556, 2472
HpyAV	CCTTC	6 cut(s)	531, 1149, 1313, 1498, 2163, 2560
HpyCH4IV	ACGT	2 cut(s)	961, 2437
HpyF10VI	GCNNNNNNNGC	2 cut(s)	2333, 2504
HpyF3I	CTNAG	9 cut(s)	334, 915, 1403, 1695, 1875, 1905, 1974, 2142, 2200
HpySE526I	ACGT	2 cut(s)	961, 2437
Hsp92II	CATG	9 cut(s)	212, 428, 711, 1136, 1381, 1691, 2023, 2042, 2271
HspAI	GCGC	1 cut(s)	2537
Kzo9I	GATC	7 cut(s)	25, 323, 453, 700, 1672, 1783, 2204
LmnI	GCTCC	6 cut(s)	311, 523, 558, 1164, 1456, 2246
Lsp1109I	GCAGC	5 cut(s)	1228, 1231, 2261, 2442, 2507
LweI	GCATC	5 cut(s)	55, 228, 340, 1428, 2044
MaeI	CTAG	3 cut(s)	827, 1104, 2541
MaeII	ACGT	2 cut(s)	961, 2437
MaeIII	GTNAC	8 cut(s)	35, 804, 1571, 1728, 1858, 1942, 2068, 2105
MalI	GATC	7 cut(s)	27, 325, 455, 702, 1674, 1785, 2206
MboI	GATC	7 cut(s)	25, 323, 453, 700, 1672, 1783, 2204
MboII	GAAGA	6 cut(s)	137, 1778, 1819, 1912, 2178, 2313
MfeI	CAATTG	1 cut(s)	1056
MflI	RGATCY	1 cut(s)	1783
MhlI	GDGCHC	5 cut(s)	1411, 1461, 1881, 2133, 2344
MlsI	TGGCCA	1 cut(s)	1076
MluNI	TGGCCA	1 cut(s)	1076
MlyI	GAGTC	4 cut(s)	410, 1061, 2231, 2314
MmeI	TCCRAC	2 cut(s)	904, 1398
Mox20I	TGGCCA	1 cut(s)	1076
MroXI	GAANNNNTTC	3 cut(s)	1008, 1198, 2520
MscI	TGGCCA	1 cut(s)	1076
MslI	CAYNNNNRTG	2 cut(s)	2231, 2272
Msp20I	TGGCCA	1 cut(s)	1076
MspA1I	CMGCKG	4 cut(s)	148, 1874, 2029, 2327
MspCI	CTTAAG	1 cut(s)	1550
MspI	CCGG	1 cut(s)	1165
MspR9I	CCNGG	5 cut(s)	48, 174, 1128, 1800, 2084
MunI	CAATTG	1 cut(s)	1056
Mva1269I	GAATGC	2 cut(s)	2012, 2520
MvaI	CCWGG	5 cut(s)	48, 174, 1128, 1800, 2084
MwoI	GCNNNNNNNGC	2 cut(s)	2333, 2504
NdeI	CATATG	2 cut(s)	235, 1939
NdeII	GATC	7 cut(s)	25, 323, 453, 700, 1672, 1783, 2204
NlaIII	CATG	9 cut(s)	212, 428, 711, 1136, 1381, 1691, 2023, 2042, 2271
NlaIV	GGNNCC	5 cut(s)	171, 1138, 1160, 1458, 1662
NmuCI	GTSAC	3 cut(s)	804, 1728, 2068
NspI	RCATGY	1 cut(s)	2271
PcsI	WCGNNNNNNNCGW	1 cut(s)	2461
PctI	GAATGC	2 cut(s)	2012, 2520
PdmI	GAANNNNTTC	3 cut(s)	1008, 1198, 2520
PfeI	GAWTC	5 cut(s)	782, 1199, 1808, 2483, 2530
PflMI	CCANNNNNTGG	2 cut(s)	1133, 1340
PfoI	TCCNGGA	1 cut(s)	46
PkrI	GCNGC	6 cut(s)	136, 1243, 1246, 2251, 2432, 2497
PleI	GAGTC	4 cut(s)	410, 1060, 2230, 2314
PpsI	GAGTC	4 cut(s)	410, 1060, 2230, 2314
PshAI	GACNNNNGTC	1 cut(s)	2455
PshBI	ATTAAT	3 cut(s)	753, 1329, 1668
PsiI	TTATAA	2 cut(s)	621, 1179
Psp124BI	GAGCTC	1 cut(s)	1881
Psp6I	CCWGG	5 cut(s)	46, 172, 1126, 1798, 2082
PspEI	GGTNACC	2 cut(s)	35, 1858
PspFI	CCCAGC	1 cut(s)	2332
PspGI	CCWGG	5 cut(s)	46, 172, 1126, 1798, 2082
PspN4I	GGNNCC	5 cut(s)	171, 1138, 1160, 1458, 1662
PspPI	GGNCC	2 cut(s)	470, 2457
PsuI	RGATCY	1 cut(s)	1783
PvuII	CAGCTG	4 cut(s)	148, 1874, 2029, 2327
RsaI	GTAC	5 cut(s)	496, 903, 1211, 1484, 1565
RsaNI	GTAC	5 cut(s)	495, 902, 1210, 1483, 1564
RseI	CAYNNNNRTG	2 cut(s)	2231, 2272
SacI	GAGCTC	1 cut(s)	1881
SatI	GCNGC	6 cut(s)	135, 1242, 1245, 2250, 2431, 2496
Sau3AI	GATC	7 cut(s)	25, 323, 453, 700, 1672, 1783, 2204
Sau96I	GGNCC	2 cut(s)	470, 2457
ScaI	AGTACT	1 cut(s)	1565
SchI	GAGTC	4 cut(s)	410, 1061, 2231, 2314
ScrFI	CCNGG	5 cut(s)	48, 174, 1128, 1800, 2084
SduI	GDGCHC	5 cut(s)	1411, 1461, 1881, 2133, 2344
SfaNI	GCATC	5 cut(s)	55, 228, 340, 1428, 2044
SfcI	CTRYAG	1 cut(s)	994
SinI	GGWCC	2 cut(s)	470, 2457
SmiMI	CAYNNNNRTG	2 cut(s)	2231, 2272
SmlI	CTYRAG	1 cut(s)	1550
SmoI	CTYRAG	1 cut(s)	1550
SsiI	CCGC	1 cut(s)	134
SspI	AATATT	2 cut(s)	646, 1007
SspMI	CTAG	3 cut(s)	827, 1104, 2541
SstI	GAGCTC	1 cut(s)	1881
StyD4I	CCNGG	5 cut(s)	46, 172, 1126, 1798, 2082
StyI	CCWWGG	1 cut(s)	735
TaiI	ACGT	2 cut(s)	964, 2440
TaqI	TCGA	4 cut(s)	381, 434, 2220, 2449
TaqII	GACCGA	1 cut(s)	1810
TatI	WGTACW	4 cut(s)	901, 1209, 1482, 1563
TauI	GCSGC	1 cut(s)	137
TfiI	GAWTC	5 cut(s)	782, 1199, 1808, 2483, 2530
TscAI	CASTG	8 cut(s)	283, 904, 1531, 1737, 1925, 2073, 2133, 2247
TseFI	GTSAC	3 cut(s)	804, 1728, 2068
TseI	GCWGC	5 cut(s)	1241, 1244, 2249, 2430, 2495
Tsp45I	GTSAC	3 cut(s)	804, 1728, 2068
TspGWI	ACGGA	1 cut(s)	298
TspRI	CASTG	8 cut(s)	283, 904, 1531, 1737, 1925, 2073, 2133, 2247
Van91I	CCANNNNNTGG	2 cut(s)	1133, 1340
Vha464I	CTTAAG	1 cut(s)	1550
VneI	GTGCAC	2 cut(s)	1407, 2340
VpaK11BI	GGWCC	2 cut(s)	470, 2457
VspI	ATTAAT	3 cut(s)	753, 1329, 1668
XagI	CCTNNNNNAGG	1 cut(s)	477
XapI	RAATTY	9 cut(s)	59, 91, 141, 329, 512, 544, 624, 725, 1337
XceI	RCATGY	1 cut(s)	2271
XcmI	CCANNNNNNNNNTGG	1 cut(s)	458
XmiI	GTMKAC	2 cut(s)	993, 1169
XmnI	GAANNNNTTC	3 cut(s)	1008, 1198, 2520
XspI	CTAG	3 cut(s)	827, 1104, 2541
ZrmI	AGTACT	1 cut(s)	1565

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.