Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004455

Physical Location & Seq

Genomic Coordinates Forward (+)

48805435 .. 48811244

Gene Structure 5810 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39259

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3378 bp

ATGGCATTCAAAATGAACTTGCTCATATTCATCTCACTCTTGGCTTTCTCAGTTGGCTCCAAGCTTTCATATTCAGACAACGCAGCGGTGCCGGAGTTCACATTCAGTTGGCTGGACGATAAAGACACATATCAAGCCGGCGAAATCGCCACCATAAGCATCAGAGCACTAAACAACTTTGACAAGCTTGACAAGAATGCGTTCAAGCCCACTCTTACAGTAGATGGAAAGATTGGGAATAGCTCTGTAGTATCTGGGGTTCTTTCAGATTTTGAAGGAGACCCTACTAGTTGGAAGCTTTTCTTTACTACAATAACAGCCGGGTTGTTTAACGTGTTGATCAATGAGGACCACTACAAAGTGTTTGATTCATCTCTGCATTTCCAAGTTCATCCAGGGAAAATATACCCATCTGTCTGTGTTGCTTCGTGGATGGGTTTCGTCCACGAGTTTGAAGCTGGTGCTCAAGCTAGAGTACAGATACTTCCGAAGGATGCATTTGGGAATAAGATCAATGAAACCAGTGAAGATCCAAGGGTACATAATTTTACAGTGTCTGTATTTCATGCAAATGATTCCACAAGCATACCGAACATCACCCACTTTGGTTGGAACCAATTTGGTTATATCATCATGGAATTCATTGTGGTAAAAGCTGGAGACCTCTTGTTGCATGTGGAAGGTGGTAATCAGAGCTTAAATGGCTGTCCACTACCCTTTAAGGTGAACCCAGGACCTCTTGAAGTTTCCAATTGTGTGGTGAAATGGGATTTTGAACCAAATGCATGGCAATTATATTCCAAGATGGAAATCTTTATATACCAGCAAGATCAATATGGTAACCTTGTTCCAGGACTCTATGAATTTGATGCTGAAGTTGTTGAGACAGAGACGAATTTGTCAATACCTGTTCCAGATTTGCACTTTGAAGAAGTGGCAGCTGGAATTCAGCTGTTTTCTTTTACTAATCTGGAACCAGGCAACTTTTTGCTGACTATATCAGATATGAAGCATGATAAAAGCATCTCTAATATGCCATATGCTTATACCGTCTTTGTTGGCTATTGCAATGGGATAAACAGTGTTGTTAATGGAACTGGTTTAAATAGCTCCGCGGCAGGAGAAAGATCAGAATTTTCAGTTTATTTGAATGATGCTTATCAAAATCCCTCTCCAGTTGAAATCGAAAGGCTTGAAATACAAATTGTAAGGGAAATTGACTCCTACCATGTGCAGTCGAGCATATTTCCTATCCAGATCATCAATGGGAGTGGACCTGCACAAGGAATAAGATATGGTACAACCAGCCAAATAGAATTTGCTCCTTCACCATCTATGACCTTGACAAATTCTACTGTCGGGAGCTTCAGTACTCTGGCAATAGCTCTCAATGTGGTATATACACCTGACAAGAGTGGGATTTATAAAATTTATGTGTTTTGTGGAAATATTTTGCTGAATGGAGGCCGTCCCTTTGATAAGGAAGTTATAGCAGGGAGTGTTGATCCATCATGCTCAACAGTTGTCAAATTTTCTCCCAAGGTGGCAAGGACGATTAATAATGAAGTAGTAGTGAAGCTCGGGGATTCATTTTTCAATCCCGTCTTGTCACAACAATCTGGGCTGAAACTAGAGATTGTTTCTGTAAACAGTTCTGGCTTTTCAAGTTCCTTGTTTGTGGACAATAATGATGGGTCATACACTGTACAATATCTGGCTAAGGAGGTTGGAACTTATGAGATGTGTGCTTCATTTGATGGCAAACGTATTTCTGCCTGCCCCTTTGGGGTCAATGTCTACAGTAGCGAATATTTTCCCAGAGCCGAAAATGATACAATTTCTGTGTGGGAGGATGAGTCAATTGCTTTTGATGTTTTGGCCAATGACTACTTTGCTGGAAATAATGCTAGTGTTGTTGAGTTCTCCAAGCCAGGTCATGGTTCCCTTATTGAGTATGGAAGGCTCCTCCGGTATACACCTTATAAAGACTATTATGGAAATGATTCCTTTGTGTACACAATGTCTGATATAAACGGCAATCTTGCTACTGCTTTTGTAAACATATCTGTTCTCACCATCCCACCACAATTTGTTTCATTTCCAAGTGAATTGCAAGCTACTGAAGGCGAGATTAATCCAAAATTTGGTGGTTTCTCTGGGTTTATGATAAGATATTCCGACATGATGGAGAACATCTCTGTTAATCTTAGTGCGCAATCTGGGACAGTATTTCTGTCTCCGATGCTAATGCAATTCTGGGAGCCCATTTGGAATGGACTTTCTGTGTACAAAGAGGATGGAGGAGTGAAGGGGTTGATATTACAAGGCAGTGTGGAAGTAATCAATTTTGCCCTTAAGTCAATACAGTACTATGGTAACGAGAACTTCTGTGGCTATGATACTATTCGGCTCACTACGAGGAATAGGAATGGAGTAAATGACTTGCATATTCCAGTTTTTGTGGAACCTATCAATGATCCTCCCTTTATTCATGCACCTGAGTTTATCATTCTGAAAAGTAATGAAAATGGGTCACTGATATATGACAGAGAAACAGACAAGTTTGAGTTCTATATTGGAGACCCAGATCTTCTTGCGTTCCCTGGTAATGAATCCCTTTTTTCGGTCATCTTCTCTATGGAAGTTAATGATGGATATTTGGTAACCAGCCTACCAGCTGAGCTCATCACTACAATAGAAGTGAAGACTAAGAATAGCTACCAGTGGCTACCACTTCAGACATATGTTACCATCTCAAAGCATTTCACGGTCAAAGCTAAGGGAATTAGATTTTATGCAACAGTTAATGAATGCAATACTGCCATGCAACAGCTGTTTTATCATGGTGGAGAGCAAGATGCCATTTTGACAGTGACATTGAATGACCTGGGAAACTATGGCTGTTATTGTAACTGTTCCGAAAAGATATCAGTGCCCTTACTTGCTGAGGCTTCTGTTAATCTAATAAGAAGAAGGCAAATGAGTTCACTTGTGTCTCGTGGCTTAGGATCAGCTATTGTCATCGAGTCCATTATAGTGTTTTCACTGGGAGCAGCACTAATGTTTTTCACATGCAAATGTGCAACTATCCTTGTAAATGAAAGAAGAACCAGAGCTACCAAGACTCCAGCTGACCCAGCAAGTGCACATAGTTTGGGCAAAGGAACTTCGGGTAAAAGTTTACCAGAGAACGCAACTCACCTTACTGCGTCTTGTTCAAGTCCCCTGCTTGGCAGCCAACGTCCCAACTTTCGACAACGGTCCTGCCGTCAATCTGGAAATAGGGAATCAAGCAAGGCAGCATATACGGCTAGTGGTGAACGCATTCAGCAGAATCTTGCGCCTAGTTTTAAGCCCTTTTGTGTTGAGAAGGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009987 GO:0016020 GO:0016021 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051704 GO:0055046 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Filamin

Protein Analysis

1125

Amino Acids

124.23

Weight (kDa)

5.0

Isoelectric Point (pI)

34.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ig_GEX2_N	PF23616	31 - 130	3.8e-30	GEX2 N-terminal Ig-like domain
Ig_GEX2_N	PF23616	138 - 242	5.6e-35	GEX2 N-terminal Ig-like domain
Filamin	PF00630	543 - 595	3.5e-06	Filamin/ABP280 repeat
Big_9	PF17963	606 - 688	2.2e-13	Bacterial Ig domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004455)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150 AT5G49150
fragaria_vesca	FvH4_4g18570
prunus_persica	Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1 Prupe.1G132400_v2.0.a1
pyrus_communis	pycom16g14000 pycom16g14010
rosa_chinensis	RchiOBHm_Chr4g0423171
rosa_laevigata	RLG00000007579
rosa_multiflora	Rmu_sc0000744.1_g000001 Rmu_sc0008829.1_g000002 Rmu_sc0020601.1_g000001
rosa_roxburghii	Rroxscaffold_5G00365330
rosa_rugosa	Rorug04G0184800 Rorug04G0184900
rosa_samantha	Rh4AG244300 Rh4AG244400 Rh4BG249500 Rh4BG249600 Rh4CG258600 Rh4CG258700 Rh4DG244300 Rh4DG244400
rosa_wichuraiana	Rw4G021050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1425, 1983
AasI	GACNNNNNNGTC	1 cut(s)	898
Acc16I	TGCGCA	1 cut(s)	2214
Acc36I	ACCTGC	1 cut(s)	1285
AccB1I	GGYRCC	1 cut(s)	88
AccB7I	CCANNNNNTGG	2 cut(s)	1937, 2144
AccI	GTMKAC	2 cut(s)	1797, 1973
AccII	CGCG	1 cut(s)	1115
AciI	CCGC	3 cut(s)	86, 1113, 1115
AclWI	GGATC	4 cut(s)	524, 1499, 2471, 3016
AcoI	YGGCCR	1 cut(s)	1878
AcuI	CTGAAG	4 cut(s)	894, 1351, 2142, 2720
AfaI	GTAC	8 cut(s)	477, 540, 1300, 1372, 1707, 2015, 2288, 2369
AfiI	CCNNNNNNNGG	6 cut(s)	1283, 1786, 1937, 2144, 2623, 3230
AflII	CTTAAG	1 cut(s)	2354
AflIII	ACRYGT	1 cut(s)	333
AhlI	ACTAGT	1 cut(s)	287
AjnI	CCWGG	7 cut(s)	394, 730, 850, 976, 1930, 2602, 2886
Alw21I	GWGCWC	4 cut(s)	169, 466, 2685, 3148
Alw26I	GTCTC	7 cut(s)	273, 654, 878, 884, 2241, 2574, 3000
Alw44I	GTGCAC	1 cut(s)	3144
AlwI	GGATC	4 cut(s)	524, 1499, 2471, 3016
AlwNI	CAGNNNCTG	1 cut(s)	557
Ama87I	CYCGRG	1 cut(s)	1580
AoxI	GGCC	2 cut(s)	1465, 1878
ApaLI	GTGCAC	1 cut(s)	3144
ApeKI	GCWGC	5 cut(s)	83, 938, 3053, 3234, 3299
AseI	ATTAAT	2 cut(s)	1557, 2133
Asp700I	GAANNNNTTC	5 cut(s)	200, 299, 1812, 2002, 3324
AspLEI	GCGC	2 cut(s)	2215, 3343
AspS9I	GGNCC	4 cut(s)	349, 734, 1274, 3261
AsuC2I	CCSGG	1 cut(s)	322
AsuHPI	GGTGA	7 cut(s)	589, 736, 772, 1320, 2065, 3191, 3329
AvaI	CYCGRG	1 cut(s)	1580
AvaII	GGWCC	4 cut(s)	349, 734, 1274, 3261
BaeGI	GKGCMC	2 cut(s)	2937, 3148
BalI	TGGCCA	1 cut(s)	1880
BanI	GGYRCC	1 cut(s)	88
BanII	GRGCYC	2 cut(s)	2265, 2685
BarI	GAAGNNNNNNTAC	2 cut(s)	468, 500
BauI	CACGAG	2 cut(s)	446, 2997
BbsI	GAAGAC	1 cut(s)	2711
Bbv12I	GWGCWC	4 cut(s)	169, 466, 2685, 3148
BbvCI	CCTCAGC	1 cut(s)	2946
BbvI	GCAGC	5 cut(s)	95, 950, 3065, 3246, 3311
BceAI	ACGGC	4 cut(s)	1452, 2050, 3252, 3324
BcgI	CGANNNNNNTGC	2 cut(s)	2230, 2264
BciT130I	CCWGG	7 cut(s)	396, 732, 852, 978, 1932, 2604, 2888
BclI	TGATCA	1 cut(s)	339
BcnI	CCSGG	1 cut(s)	322
BcoDI	GTCTC	7 cut(s)	273, 654, 878, 884, 2241, 2574, 3000
BcuI	ACTAGT	1 cut(s)	287
BfaI	CTAG	6 cut(s)	288, 471, 1631, 1908, 3312, 3345
BfmI	CTRYAG	2 cut(s)	246, 1798
BfrI	CTTAAG	1 cut(s)	2354
BfuAI	ACCTGC	1 cut(s)	1285
BglII	AGATCT	1 cut(s)	2587
BisI	GCNGC	6 cut(s)	84, 939, 1116, 3054, 3235, 3300
BlpI	GCTNAGC	1 cut(s)	2679
BlsI	GCNGC	6 cut(s)	85, 940, 1117, 3055, 3236, 3301
BmcAI	AGTACT	2 cut(s)	1372, 2369
Bme1390I	CCNGG	8 cut(s)	322, 396, 732, 852, 978, 1932, 2604, 2888
Bme18I	GGWCC	4 cut(s)	349, 734, 1274, 3261
BmeT110I	CYCGRG	1 cut(s)	1580
BmgT120I	GGNCC	4 cut(s)	349, 734, 1274, 3261
BmiI	GGNNCC	8 cut(s)	58, 90, 614, 975, 1942, 1964, 2262, 2466
BmrFI	CCNGG	8 cut(s)	322, 396, 732, 852, 978, 1932, 2604, 2888
BmrI	ACTGGG	1 cut(s)	3056
BmsI	GCATC	7 cut(s)	168, 484, 859, 1032, 1144, 2232, 2848
BmuI	ACTGGG	1 cut(s)	3056
BoxI	GACNNNNGTC	1 cut(s)	3259
BpiI	GAAGAC	1 cut(s)	2711
BplI	GAGNNNNNCTC	2 cut(s)	2180, 2212
BpmI	CTGGAG	3 cut(s)	678, 1158, 3111
Bpu10I	CCTNAGC	4 cut(s)	1719, 2778, 2946, 3004
Bpu1102I	GCTNAGC	1 cut(s)	2679
BpuEI	CTTGAG	1 cut(s)	450
BpuMI	CCSGG	1 cut(s)	322
BsaBI	GATNNNNATC	2 cut(s)	809, 1158
BsaI	GGTCTC	3 cut(s)	273, 654, 2574
BsaJI	CCNNGG	7 cut(s)	395, 533, 730, 1113, 1539, 2602, 2887
BsaWI	WCCGGW	1 cut(s)	1968
BsaXI	ACNNNNNCTCC	6 cut(s)	1354, 1384, 1841, 1871, 3109, 3139
Bsc4I	CCNNNNNNNGG	6 cut(s)	1283, 1786, 1937, 2144, 2623, 3230
Bse118I	RCCGGY	1 cut(s)	137
Bse1I	ACTGG	6 cut(s)	522, 1102, 1175, 2453, 2722, 3051
Bse3DI	GCAATG	1 cut(s)	1075
Bse8I	GATNNNNATC	2 cut(s)	809, 1158
BseBI	CCWGG	7 cut(s)	396, 732, 852, 978, 1932, 2604, 2888
BseDI	CCNNGG	7 cut(s)	395, 533, 730, 1113, 1539, 2602, 2887
BseGI	GGATG	6 cut(s)	391, 438, 499, 1858, 2076, 2302
BseJI	GATNNNNATC	2 cut(s)	809, 1158
BseLI	CCNNNNNNNGG	6 cut(s)	1283, 1786, 1937, 2144, 2623, 3230
BseMI	GCAATG	1 cut(s)	1075
BseMII	CTCAG	4 cut(s)	63, 2490, 2670, 2937
BseNI	ACTGG	6 cut(s)	522, 1102, 1175, 2453, 2722, 3051
BseRI	GAGGAG	2 cut(s)	1955, 2316
BseSI	GKGCMC	2 cut(s)	2937, 3148
BseXI	GCAGC	5 cut(s)	95, 950, 3065, 3246, 3311
BseYI	CCCAGC	1 cut(s)	3136
BsgI	GTGCAG	2 cut(s)	1253, 1263
Bsh1236I	CGCG	1 cut(s)	1115
BshFI	GGCC	2 cut(s)	1467, 1880
BshNI	GGYRCC	1 cut(s)	88
BsiHKAI	GWGCWC	4 cut(s)	169, 466, 2685, 3148
BsiHKCI	CYCGRG	1 cut(s)	1580
BsiSI	CCGG	4 cut(s)	92, 138, 321, 1969
BslFI	GGGAC	4 cut(s)	1455, 2236, 3207, 3228
BslI	CCNNNNNNNGG	6 cut(s)	1283, 1786, 1937, 2144, 2623, 3230
BsmAI	GTCTC	7 cut(s)	273, 654, 878, 884, 2241, 2574, 3000
BsmBI	CGTCTC	1 cut(s)	884
BsmFI	GGGAC	4 cut(s)	1455, 2236, 3207, 3228
BsmI	GAATGC	4 cut(s)	5, 202, 2816, 3324
BsnI	GGCC	2 cut(s)	1467, 1880
Bso31I	GGTCTC	3 cut(s)	273, 654, 2574
BsoBI	CYCGRG	1 cut(s)	1580
Bsp1286I	GDGCHC	6 cut(s)	169, 466, 2265, 2685, 2937, 3148
Bsp1407I	TGTACA	3 cut(s)	1705, 2013, 2286
Bsp1720I	GCTNAGC	1 cut(s)	2679
BspACI	CCGC	3 cut(s)	86, 1113, 1115
BspANI	GGCC	2 cut(s)	1467, 1880
BspCNI	CTCAG	4 cut(s)	62, 2491, 2671, 2938
BspFNI	CGCG	1 cut(s)	1115
BspLI	GGNNCC	8 cut(s)	58, 90, 614, 975, 1942, 1964, 2262, 2466
BspMI	ACCTGC	1 cut(s)	1285
BspPI	GGATC	4 cut(s)	524, 1499, 2471, 3016
BspT107I	GGYRCC	1 cut(s)	88
BspTI	CTTAAG	1 cut(s)	2354
BspTNI	GGTCTC	3 cut(s)	273, 654, 2574
BsrDI	GCAATG	1 cut(s)	1075
BsrFI	RCCGGY	1 cut(s)	137
BsrGI	TGTACA	3 cut(s)	1705, 2013, 2286
BsrI	ACTGG	6 cut(s)	522, 1102, 1175, 2453, 2722, 3051
BssAI	RCCGGY	1 cut(s)	137
BssECI	CCNNGG	7 cut(s)	395, 533, 730, 1113, 1539, 2602, 2887
BssNAI	GTATAC	1 cut(s)	1974
BssSI	CACGAG	2 cut(s)	446, 2997
BssT1I	CCWWGG	2 cut(s)	533, 1539
Bst1107I	GTATAC	1 cut(s)	1974
Bst2BI	CACGAG	2 cut(s)	446, 2997
Bst2UI	CCWGG	7 cut(s)	396, 732, 852, 978, 1932, 2604, 2888
BstAFI	CTTAAG	1 cut(s)	2354
BstAUI	TGTACA	3 cut(s)	1705, 2013, 2286
BstC8I	GCNNGC	3 cut(s)	139, 1777, 2115
BstDEI	CTNAG	9 cut(s)	49, 1719, 2207, 2499, 2679, 2709, 2778, 2946, 3004
BstDSI	CCRYGG	1 cut(s)	1113
BstEII	GGTNACC	2 cut(s)	839, 2662
BstENI	CCTNNNNNAGG	1 cut(s)	1281
BstF5I	GGATG	6 cut(s)	391, 438, 499, 1858, 2076, 2302
BstFNI	CGCG	1 cut(s)	1115
BstHHI	GCGC	2 cut(s)	2215, 3343
BstMAI	GTCTC	7 cut(s)	273, 654, 878, 884, 2241, 2574, 3000
BstMWI	GCNNNNNNNGC	3 cut(s)	702, 3137, 3308
BstNI	CCWGG	7 cut(s)	396, 732, 852, 978, 1932, 2604, 2888
BstNSI	RCATGY	2 cut(s)	677, 3075
BstPAI	GACNNNNGTC	1 cut(s)	3259
BstPI	GGTNACC	2 cut(s)	839, 2662
BstSCI	CCNGG	8 cut(s)	320, 394, 730, 850, 976, 1930, 2602, 2886
BstSFI	CTRYAG	2 cut(s)	246, 1798
BstSLI	GKGCMC	2 cut(s)	2937, 3148
BstUI	CGCG	1 cut(s)	1115
BstV1I	GCAGC	5 cut(s)	95, 950, 3065, 3246, 3311
BstV2I	GAAGAC	1 cut(s)	2711
BstX2I	RGATCY	2 cut(s)	529, 2587
BstXI	CCANNNNNNTGG	2 cut(s)	757, 786
BstYI	RGATCY	2 cut(s)	529, 2587
BstZ17I	GTATAC	1 cut(s)	1974
BsuRI	GGCC	2 cut(s)	1467, 1880
BtgI	CCRYGG	1 cut(s)	1113
BtsCI	GGATG	6 cut(s)	391, 438, 499, 1858, 2076, 2302
BtsI	GCAGTG	1 cut(s)	2335
BveI	ACCTGC	1 cut(s)	1285
Cac8I	GCNNGC	3 cut(s)	139, 1777, 2115
CaiI	CAGNNNCTG	1 cut(s)	557
CfoI	GCGC	2 cut(s)	2215, 3343
Cfr10I	RCCGGY	1 cut(s)	137
Cfr13I	GGNCC	4 cut(s)	349, 734, 1274, 3261
Cfr42I	CCGCGG	1 cut(s)	1116
CseI	GACGC	1 cut(s)	3198
Csp6I	GTAC	8 cut(s)	476, 539, 1299, 1371, 1706, 2014, 2287, 2368
CspCI	CAANNNNNGTGG	4 cut(s)	590, 625, 1252, 1287
CviQI	GTAC	8 cut(s)	476, 539, 1299, 1371, 1706, 2014, 2287, 2368
DdeI	CTNAG	9 cut(s)	49, 1719, 2207, 2499, 2679, 2709, 2778, 2946, 3004
DraI	TTTAAA	1 cut(s)	1104
DrdI	GACNNNNNNGTC	1 cut(s)	898
DseDI	GACNNNNNNGTC	1 cut(s)	898
EaeI	YGGCCR	1 cut(s)	1878
Ecl136II	GAGCTC	1 cut(s)	2683
Eco130I	CCWWGG	2 cut(s)	533, 1539
Eco24I	GRGCYC	2 cut(s)	2265, 2685
Eco31I	GGTCTC	3 cut(s)	273, 654, 2574
Eco32I	GATATC	1 cut(s)	2928
Eco47I	GGWCC	4 cut(s)	349, 734, 1274, 3261
Eco53kI	GAGCTC	1 cut(s)	2683
Eco57I	CTGAAG	4 cut(s)	894, 1351, 2142, 2720
Eco88I	CYCGRG	1 cut(s)	1580
Eco91I	GGTNACC	2 cut(s)	839, 2662
EcoICRI	GAGCTC	1 cut(s)	2683
EcoNI	CCTNNNNNAGG	1 cut(s)	1281
EcoO109I	RGGNCCY	1 cut(s)	734
EcoO65I	GGTNACC	2 cut(s)	839, 2662
EcoRI	GAATTC	2 cut(s)	638, 945
EcoRII	CCWGG	7 cut(s)	394, 730, 850, 976, 1930, 2602, 2886
EcoRV	GATATC	1 cut(s)	2928
EcoT14I	CCWWGG	2 cut(s)	533, 1539
EcoT22I	ATGCAT	2 cut(s)	499, 787
EcoT38I	GRGCYC	2 cut(s)	2265, 2685
ErhI	CCWWGG	2 cut(s)	533, 1539
Esp3I	CGTCTC	1 cut(s)	884
FalI	AAGNNNNNCTT	2 cut(s)	287, 319
FaqI	GGGAC	4 cut(s)	1455, 2236, 3207, 3228
FauNDI	CATATG	2 cut(s)	1039, 2743
FbaI	TGATCA	1 cut(s)	339
FblI	GTMKAC	2 cut(s)	1797, 1973
Fnu4HI	GCNGC	6 cut(s)	84, 939, 1116, 3054, 3235, 3300
FokI	GGATG	6 cut(s)	378, 445, 506, 1865, 2063, 2309
FriOI	GRGCYC	2 cut(s)	2265, 2685
Fsp4HI	GCNGC	6 cut(s)	84, 939, 1116, 3054, 3235, 3300
FspBI	CTAG	6 cut(s)	288, 471, 1631, 1908, 3312, 3345
FspI	TGCGCA	1 cut(s)	2214
GlaI	GCGC	2 cut(s)	2214, 3342
GluI	GCNGC	6 cut(s)	84, 939, 1116, 3054, 3235, 3300
GsaI	CCCAGC	1 cut(s)	3140
GsuI	CTGGAG	3 cut(s)	678, 1158, 3111
HaeIII	GGCC	2 cut(s)	1467, 1880
HapII	CCGG	4 cut(s)	92, 138, 321, 1969
HgaI	GACGC	1 cut(s)	3198
HhaI	GCGC	2 cut(s)	2215, 3343
Hin6I	GCGC	2 cut(s)	2213, 3341
HinP1I	GCGC	2 cut(s)	2213, 3341
HindIII	AAGCTT	3 cut(s)	62, 185, 296
HpaII	CCGG	4 cut(s)	92, 138, 321, 1969
HphI	GGTGA	7 cut(s)	589, 736, 772, 1320, 2065, 3191, 3329
Hpy188III	TCNNGA	6 cut(s)	740, 914, 971, 1255, 1360, 3276
HpyAV	CCTTC	9 cut(s)	269, 484, 674, 1335, 1953, 2117, 2302, 2967, 3364
HpyCH4IV	ACGT	3 cut(s)	333, 1765, 3241
HpyF10VI	GCNNNNNNNGC	3 cut(s)	702, 3137, 3308
HpyF3I	CTNAG	9 cut(s)	49, 1719, 2207, 2499, 2679, 2709, 2778, 2946, 3004
HpySE526I	ACGT	3 cut(s)	333, 1765, 3241
HspAI	GCGC	2 cut(s)	2213, 3341
KroI	GCCGGC	1 cut(s)	137
KroNI	GCCGGC	1 cut(s)	139
Ksp22I	TGATCA	1 cut(s)	339
KspI	CCGCGG	1 cut(s)	1116
LmnI	GCTCC	7 cut(s)	62, 1115, 1327, 1362, 1968, 2260, 3050
Lsp1109I	GCAGC	5 cut(s)	95, 950, 3065, 3246, 3311
LweI	GCATC	7 cut(s)	168, 484, 859, 1032, 1144, 2232, 2848
MaeI	CTAG	6 cut(s)	288, 471, 1631, 1908, 3312, 3345
MaeII	ACGT	3 cut(s)	333, 1765, 3241
MaeIII	GTNAC	8 cut(s)	839, 1608, 2375, 2532, 2662, 2746, 2872, 2909
MboII	GAAGA	7 cut(s)	539, 941, 2582, 2623, 2716, 2982, 3117
MfeI	CAATTG	2 cut(s)	751, 1860
MflI	RGATCY	2 cut(s)	529, 2587
MhlI	GDGCHC	6 cut(s)	169, 466, 2265, 2685, 2937, 3148
MlsI	TGGCCA	1 cut(s)	1880
MluNI	TGGCCA	1 cut(s)	1880
MlyI	GAGTC	5 cut(s)	849, 1214, 1865, 3035, 3118
MmeI	TCCRAC	4 cut(s)	272, 590, 1708, 2202
Mox20I	TGGCCA	1 cut(s)	1880
Mph1103I	ATGCAT	2 cut(s)	499, 787
MroNI	GCCGGC	1 cut(s)	137
MroXI	GAANNNNTTC	5 cut(s)	200, 299, 1812, 2002, 3324
MscI	TGGCCA	1 cut(s)	1880
MslI	CAYNNNNRTG	3 cut(s)	570, 3035, 3076
Msp20I	TGGCCA	1 cut(s)	1880
MspA1I	CMGCKG	7 cut(s)	86, 941, 952, 1115, 2678, 2833, 3131
MspCI	CTTAAG	1 cut(s)	2354
MspI	CCGG	4 cut(s)	92, 138, 321, 1969
MspR9I	CCNGG	8 cut(s)	322, 396, 732, 852, 978, 1932, 2604, 2888
MunI	CAATTG	2 cut(s)	751, 1860
Mva1269I	GAATGC	4 cut(s)	5, 202, 2816, 3324
MvaI	CCWGG	7 cut(s)	396, 732, 852, 978, 1932, 2604, 2888
MvnI	CGCG	1 cut(s)	1115
MwoI	GCNNNNNNNGC	3 cut(s)	702, 3137, 3308
NaeI	GCCGGC	1 cut(s)	139
NciI	CCSGG	1 cut(s)	322
NdeI	CATATG	2 cut(s)	1039, 2743
NgoMIV	GCCGGC	1 cut(s)	137
NlaIV	GGNNCC	8 cut(s)	58, 90, 614, 975, 1942, 1964, 2262, 2466
NmuCI	GTSAC	3 cut(s)	1608, 2532, 2872
NsbI	TGCGCA	1 cut(s)	2214
NsiI	ATGCAT	2 cut(s)	499, 787
NspI	RCATGY	2 cut(s)	677, 3075
PcsI	WCGNNNNNNNCGW	1 cut(s)	3265
PctI	GAATGC	4 cut(s)	5, 202, 2816, 3324
PdiI	GCCGGC	1 cut(s)	139
PdmI	GAANNNNTTC	5 cut(s)	200, 299, 1812, 2002, 3324
PfeI	GAWTC	7 cut(s)	368, 575, 1586, 2003, 2612, 3287, 3334
PflMI	CCANNNNNTGG	2 cut(s)	1937, 2144
PfoI	TCCNGGA	1 cut(s)	850
PkrI	GCNGC	6 cut(s)	85, 940, 1117, 3055, 3236, 3301
PleI	GAGTC	5 cut(s)	849, 1214, 1864, 3034, 3118
PpsI	GAGTC	5 cut(s)	849, 1214, 1864, 3034, 3118
PpuMI	RGGWCCY	1 cut(s)	734
PshAI	GACNNNNGTC	1 cut(s)	3259
PshBI	ATTAAT	2 cut(s)	1557, 2133
PsiI	TTATAA	2 cut(s)	1425, 1983
Psp124BI	GAGCTC	1 cut(s)	2685
Psp5II	RGGWCCY	1 cut(s)	734
Psp6I	CCWGG	7 cut(s)	394, 730, 850, 976, 1930, 2602, 2886
PspEI	GGTNACC	2 cut(s)	839, 2662
PspFI	CCCAGC	1 cut(s)	3136
PspGI	CCWGG	7 cut(s)	394, 730, 850, 976, 1930, 2602, 2886
PspN4I	GGNNCC	8 cut(s)	58, 90, 614, 975, 1942, 1964, 2262, 2466
PspPI	GGNCC	4 cut(s)	349, 734, 1274, 3261
PspPPI	RGGWCCY	1 cut(s)	734
PsrI	GAACNNNNNNTAC	4 cut(s)	243, 275, 3100, 3132
PstNI	CAGNNNCTG	1 cut(s)	557
PsuI	RGATCY	2 cut(s)	529, 2587
PvuII	CAGCTG	5 cut(s)	941, 952, 2678, 2833, 3131
RsaI	GTAC	8 cut(s)	477, 540, 1300, 1372, 1707, 2015, 2288, 2369
RsaNI	GTAC	8 cut(s)	476, 539, 1299, 1371, 1706, 2014, 2287, 2368
RseI	CAYNNNNRTG	3 cut(s)	570, 3035, 3076
SacI	GAGCTC	1 cut(s)	2685
SacII	CCGCGG	1 cut(s)	1116
SatI	GCNGC	6 cut(s)	84, 939, 1116, 3054, 3235, 3300
Sau96I	GGNCC	4 cut(s)	349, 734, 1274, 3261
ScaI	AGTACT	2 cut(s)	1372, 2369
SchI	GAGTC	5 cut(s)	849, 1214, 1865, 3035, 3118
ScrFI	CCNGG	8 cut(s)	322, 396, 732, 852, 978, 1932, 2604, 2888
SduI	GDGCHC	6 cut(s)	169, 466, 2265, 2685, 2937, 3148
SfaNI	GCATC	7 cut(s)	168, 484, 859, 1032, 1144, 2232, 2848
SfcI	CTRYAG	2 cut(s)	246, 1798
Sfr303I	CCGCGG	1 cut(s)	1116
SgrBI	CCGCGG	1 cut(s)	1116
SinI	GGWCC	4 cut(s)	349, 734, 1274, 3261
SmiMI	CAYNNNNRTG	3 cut(s)	570, 3035, 3076
SmlI	CTYRAG	2 cut(s)	465, 2354
SmoI	CTYRAG	2 cut(s)	465, 2354
SpeI	ACTAGT	1 cut(s)	287
SsiI	CCGC	3 cut(s)	86, 1113, 1115
SspI	AATATT	2 cut(s)	1450, 1811
SspMI	CTAG	6 cut(s)	288, 471, 1631, 1908, 3312, 3345
SstI	GAGCTC	1 cut(s)	2685
StyD4I	CCNGG	8 cut(s)	320, 394, 730, 850, 976, 1930, 2602, 2886
StyI	CCWWGG	2 cut(s)	533, 1539
TaiI	ACGT	3 cut(s)	336, 1768, 3244
TaqI	TCGA	4 cut(s)	1185, 1238, 3024, 3253
TaqII	GACCGA	1 cut(s)	2614
TatI	WGTACW	6 cut(s)	475, 1370, 1705, 2013, 2286, 2367
TauI	GCSGC	1 cut(s)	1118
TfiI	GAWTC	7 cut(s)	368, 575, 1586, 2003, 2612, 3287, 3334
TseFI	GTSAC	3 cut(s)	1608, 2532, 2872
TseI	GCWGC	5 cut(s)	83, 938, 3053, 3234, 3299
Tsp45I	GTSAC	3 cut(s)	1608, 2532, 2872
Van91I	CCANNNNNTGG	2 cut(s)	1937, 2144
Vha464I	CTTAAG	1 cut(s)	2354
VneI	GTGCAC	1 cut(s)	3144
VpaK11BI	GGWCC	4 cut(s)	349, 734, 1274, 3261
VspI	ATTAAT	2 cut(s)	1557, 2133
XagI	CCTNNNNNAGG	1 cut(s)	1281
XceI	RCATGY	2 cut(s)	677, 3075
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1262
XmiI	GTMKAC	2 cut(s)	1797, 1973
XmnI	GAANNNNTTC	5 cut(s)	200, 299, 1812, 2002, 3324
XspI	CTAG	6 cut(s)	288, 471, 1631, 1908, 3312, 3345
ZrmI	AGTACT	2 cut(s)	1372, 2369
Zsp2I	ATGCAT	2 cut(s)	499, 787

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.