Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009792

Physical Location & Seq

Genomic Coordinates Reverse (-)

20448310 .. 20451062

Gene Structure 2753 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G50230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGTACAGGAGGAGAAAGCTATGGAAGCAATAAATGACGCTTTGAGAGCTTTGCGGAAGCGTCATCTTCTGGAAGAAGGAGCTCATGCTCCTGCGATTTCTGCTCTCTCTAAGCCTTTAATCTCTCAGGGTTCAGAATGGAAGGAGAAAACAGAAAAGCTGGAAACAGAGTTACAGCAATGTTACAAAGCTCAATCTCGACTATCTGAACAACTGGTGATAGAAGTAGCTGAATCCAGAACTTCAAAGGCTATTTTACAAGAGAAGGAGTTGTTAATTAATGACTTGCAGAAGGAATTAACACAAAGAAGGGAGGATTGTACACGATTACAAGAAGAGTTAGAGGAAAAGACCAAGACGGTGGATGTACTTATTGCTGAAAACCTGGAAATACGGTCTCAGTTGGAGGAGATGACAAGTAGAGTGCAAAAAGCAGAGACTGAGAATAAAATGTTAATTGATCGGTGGATGTTGCAGAAGATGCAGGATGCAGAACGTCTTAATGAGGCAAATGATCTCTATGAAGAAATGCTAGCTAAGCTGAAGGCAAATGGTTTGGAAACTCTTGCTCGGCAGCAAGTTGATGGTATTGTCCGCCGCAATGAAGATGGAACCGATCACTTTGTTGAGTCAACCATTCCGTCAACATGTGCGAATCGTATCCATGCTCATGAAGGTGGCTGTGGTTCAATAGTCTTTGAATACAACTCTGGTACTCTGTTTACTGGTGGGCAAGATCGAGCAGTAAAAATGTGGGACACCAATAGCGGAACTTTAATCAAAAGCTTATACGGTTCCCTTGGGAATATACTTGATATGGCCGTAACCCACGACAATAAATCCGTGATCGCAGCAACCAGCTCAAATAATTTGTTTGTATGGGATGTTAGCTCGGGTAGGGTACGCCATACACTCACAGGCCACACGGATAAGGTTTGTGCTGTGGATGTGAGCAAATTCTCTAGCCGACATGTTGTCAGTGCAGCATATGACCGTACCATAAAACTTTGGGATTTGCATAAAGGTTACTGCACTAACACAGTACTCTTTACCAGCAACTGCAATGCAATCTGCCTCAGCATAGATGGGCTTACGGTATTCTCAGGCCACATGGATGGGAATCTTAGGTTATGGGATATTCAAACTGGGAAACTTCTGTCCGAAGTAGCTGGACATTCTTCTGCTGTGACCTCAGTATCATTGTCCCGGAACGGAAATAGGATCTTGACGAGCGGGAGAGACAACGTGCATAATGTATTTGATACCCGGACTTTGGAAATATGTGGGACACTGAGAGCATCGGGGAACAGATTAGCATCGAATTGGAGCCGGTCATGCATAAGTCCAGATGATGATTATGTGGCTGCGGGATCTGCAGATGGTTCGGTTCATGTATGGTCGCTATCTAAAGGCAATATAGTGAGCATTCTCAAGGAGCAAACATCTCCTATACTGTGTTGTTCTTGGAGTGGGATCGGGAAACCATTGGCATCGGCTGATAAAAACGGGTACGTTTGTACGTGGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000421 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005776 GO:0006508 GO:0006511 GO:0006807 GO:0006810 GO:0006897 GO:0006907 GO:0006909 GO:0006914 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0016740 GO:0019538 GO:0019776 GO:0019941 GO:0022607 GO:0030163 GO:0030587 GO:0031090 GO:0031154 GO:0032502 GO:0032991 GO:0034274 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048856 GO:0051179 GO:0051234 GO:0051603 GO:0051703 GO:0051704 GO:0061919 GO:0070925 GO:0071704 GO:0071840 GO:0090382 GO:0090702 GO:0098588 GO:0098657 GO:0098805 GO:0099120 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905037 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04140 ko04621 map04136 map04138 map04140 map04621

Pfam Domains

Protein Families

ATG16 WD40

Protein Analysis

509

Amino Acids

56.43

Weight (kDa)

5.84

Isoelectric Point (pI)

43.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATG16	PF08614	43 - 168	6.3e-15	Autophagy protein 16 (ATG16)
Beta-prop_THOC3	PF25174	215 - 305	7.3e-11	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	216 - 351	2.5e-23	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	216 - 415	1.5e-19	CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd	PF25047	217 - 340	2.2e-10	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	217 - 297	1.4e-10	WDR3 second beta-propeller domain
WDR55	PF24796	221 - 421	7.6e-16	WDR55
Beta-prop_WDR36-Utp21_2nd	PF25168	221 - 372	3.7e-14	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR3_1st	PF25173	222 - 349	2.4e-19	WDR3 first beta-propeller domain
WD40_Gbeta	PF25391	223 - 315	8.7e-07	G protein beta WD-40 repeat protein
WD40_WDHD1_1st	PF24817	223 - 506	2.2e-27	WDHD1 first WD40 domain
WD40_Prp19	PF24814	230 - 435	1.8e-29	Prp19 WD40 domain
WD40_MABP1-WDR62_2nd	PF24782	235 - 339	5.1e-10	MABP1/WDR62 second WD40 domain
Beta-prop_ACSF4	PF13570	236 - 480	1.2e-08	Beta-alanine-activating enzyme, beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	245 - 416	1e-10	WDR36/Utp21 first beta-propeller
Beta-prop_WDR75_1st	PF23869	275 - 360	5e-06	WD repeat-containing protein 75 first beta-propeller
WD40_Gbeta	PF25391	278 - 466	9.1e-18	G protein beta WD-40 repeat protein
Beta-prop_WDR90_POC16_2nd	PF23393	278 - 357	8.8e-06	WDR90/POC16, second beta-propeller
Beta-prop_EML	PF23409	282 - 422	5.7e-09	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_THOC3	PF25174	293 - 506	1.1e-32	THOC3 beta-propeller domain
WD40	PF00400	300 - 338	2.9e-07	WD domain, G-beta repeat
Beta-prop_WDR3_2nd	PF25172	302 - 421	6.5e-13	WDR3 second beta-propeller domain
EIF3I	PF24805	304 - 365	2e-06	EIF3I
Beta-prop_SCAP	PF24017	317 - 424	1.3e-06	SCAP Beta-propeller
Beta-prop_EML_2	PF23414	322 - 429	3.7e-10	Echinoderm microtubule-associated protein second beta-propeller
WD40_CDC20-Fz	PF24807	334 - 427	2.4e-09	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	354 - 425	9.2e-11	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	360 - 437	4.2e-13	WDR5 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	362 - 429	1.2e-08	TEP-1 second beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	365 - 499	3.2e-08	WDR36/Utp21 second beta-propeller domain
EIF3I	PF24805	365 - 456	1.8e-08	EIF3I
WDR55	PF24796	385 - 507	1.6e-06	WDR55
EIF3I	PF24805	390 - 496	1.1e-08	EIF3I
Beta-prop_WDR3_1st	PF25173	419 - 508	3.4e-08	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	446 - 508	5.3e-07	WDR5 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0009792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50230
fragaria_vesca	FvH4_5g06790 FvH4_5g06790
malus_domestica	MD06G1161200.v1.1 MD14G1166400.v1.1
prunus_persica	Prupe.5G160700_v2.0.a1 Prupe.5G160700_v2.0.a1
pyrus_communis	pycom06g14390 pycom14g13900
rosa_chinensis	RchiOBHm_Chr7g0191761 RchiOBHm_Chr7g0191771
rosa_laevigata	RLG00000004427
rosa_multiflora	Rmu_co8375695.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263550
rosa_rugosa	Rorug06G0511200
rosa_samantha	Rh7AG121000 Rh7BG122700 Rh7CG125600 Rh7DG124300
rosa_wichuraiana	Rw7G010300 Rw7G010310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1233
AciI	CCGC	6 cut(s)	55, 595, 598, 768, 1233, 1367
AclWI	GGATC	3 cut(s)	1229, 1378, 1481
AcoI	YGGCCR	1 cut(s)	819
AcsI	RAATTY	1 cut(s)	956
AcuI	CTGAAG	1 cut(s)	563
AfaI	GTAC	9 cut(s)	6, 322, 369, 715, 903, 997, 1044, 1511, 1519
AfiI	CCNNNNNNNGG	1 cut(s)	1273
AflIII	ACRYGT	2 cut(s)	647, 970
AgsI	TTSAA	4 cut(s)	246, 690, 701, 1142
AhdI	GACNNNNNGTC	1 cut(s)	974
AjnI	CCWGG	1 cut(s)	384
Alw21I	GWGCWC	1 cut(s)	85
Alw26I	GTCTC	3 cut(s)	402, 431, 1233
AlwI	GGATC	3 cut(s)	1229, 1378, 1481
AlwNI	CAGNNNCTG	2 cut(s)	440, 1059
Ama87I	CYCGRG	1 cut(s)	892
AoxI	GGCC	3 cut(s)	819, 919, 1105
ApeKI	GCWGC	4 cut(s)	574, 851, 983, 1364
ApoI	RAATTY	1 cut(s)	956
AseI	ATTAAT	1 cut(s)	279
AsuC2I	CCSGG	2 cut(s)	1207, 1267
AsuHPI	GGTGA	1 cut(s)	229
AsuNHI	GCTAGC	1 cut(s)	532
AvaI	CYCGRG	1 cut(s)	892
BaeI	ACNNNNGTAYC	3 cut(s)	1179, 1212, 1501
BanII	GRGCYC	1 cut(s)	85
Bbv12I	GWGCWC	1 cut(s)	85
BbvCI	CCTCAGC	1 cut(s)	1076
BbvI	GCAGC	4 cut(s)	586, 863, 995, 1351
BccI	CCATC	5 cut(s)	578, 602, 1079, 1109, 1373
BceAI	ACGGC	1 cut(s)	806
BcgI	CGANNNNNNTGC	2 cut(s)	1365, 1399
BciT130I	CCWGG	1 cut(s)	386
BciVI	GTATCC	1 cut(s)	671
BcnI	CCSGG	2 cut(s)	1207, 1267
BcoDI	GTCTC	3 cut(s)	402, 431, 1233
BfaI	CTAG	2 cut(s)	533, 963
BfmI	CTRYAG	1 cut(s)	1374
BfuI	GTATCC	1 cut(s)	671
BisI	GCNGC	5 cut(s)	575, 598, 852, 984, 1365
BlpI	GCTNAGC	1 cut(s)	537
BlsI	GCNGC	5 cut(s)	576, 599, 853, 985, 1366
BmcAI	AGTACT	1 cut(s)	1044
Bme1390I	CCNGG	3 cut(s)	386, 1207, 1267
BmeRI	GACNNNNNGTC	1 cut(s)	974
BmeT110I	CYCGRG	1 cut(s)	892
BmiI	GGNNCC	3 cut(s)	613, 796, 1328
BmrFI	CCNGG	3 cut(s)	386, 1207, 1267
BmrI	ACTGGG	1 cut(s)	1155
BmsI	GCATC	5 cut(s)	471, 478, 1307, 1325, 1499
BmtI	GCTAGC	1 cut(s)	536
BmuI	ACTGGG	1 cut(s)	1155
Bpu10I	CCTNAGC	1 cut(s)	1076
Bpu1102I	GCTNAGC	1 cut(s)	537
BpuEI	CTTGAG	1 cut(s)	1415
BpuMI	CCSGG	2 cut(s)	1207, 1267
BsaAI	YACGTR	1 cut(s)	1521
BsaBI	GATNNNNATC	2 cut(s)	1119, 1315
BsaI	GGTCTC	1 cut(s)	402
BsaJI	CCNNGG	1 cut(s)	799
Bsc4I	CCNNNNNNNGG	1 cut(s)	1273
Bse118I	RCCGGY	1 cut(s)	1329
Bse1I	ACTGG	3 cut(s)	219, 730, 1150
Bse3DI	GCAATG	3 cut(s)	185, 607, 1069
Bse8I	GATNNNNATC	2 cut(s)	1119, 1315
BseBI	CCWGG	1 cut(s)	386
BseDI	CCNNGG	1 cut(s)	799
BseGI	GGATG	6 cut(s)	370, 474, 493, 889, 952, 1120
BseJI	GATNNNNATC	2 cut(s)	1119, 1315
BseLI	CCNNNNNNNGG	1 cut(s)	1273
BseMI	GCAATG	3 cut(s)	185, 607, 1069
BseMII	CTCAG	7 cut(s)	140, 413, 432, 1090, 1116, 1206, 1283
BseNI	ACTGG	3 cut(s)	219, 730, 1150
BseRI	GAGGAG	2 cut(s)	26, 422
BseXI	GCAGC	4 cut(s)	586, 863, 995, 1351
BsgI	GTGCAG	2 cut(s)	1002, 1015
BshFI	GGCC	3 cut(s)	821, 921, 1107
BsiHKAI	GWGCWC	1 cut(s)	85
BsiHKCI	CYCGRG	1 cut(s)	892
BsiSI	CCGG	3 cut(s)	1207, 1267, 1330
BslFI	GGGAC	3 cut(s)	770, 1189, 1300
BslI	CCNNNNNNNGG	1 cut(s)	1273
BsmAI	GTCTC	3 cut(s)	402, 431, 1233
BsmFI	GGGAC	3 cut(s)	770, 1189, 1300
BsmI	GAATGC	1 cut(s)	1425
BsnI	GGCC	3 cut(s)	821, 921, 1107
Bso31I	GGTCTC	1 cut(s)	402
BsoBI	CYCGRG	1 cut(s)	892
Bsp1286I	GDGCHC	1 cut(s)	85
Bsp1407I	TGTACA	1 cut(s)	320
Bsp143I	GATC	8 cut(s)	460, 514, 616, 736, 846, 1221, 1370, 1473
Bsp1720I	GCTNAGC	1 cut(s)	537
BspACI	CCGC	6 cut(s)	55, 595, 598, 768, 1233, 1367
BspANI	GGCC	3 cut(s)	821, 921, 1107
BspCNI	CTCAG	7 cut(s)	139, 412, 433, 1089, 1115, 1205, 1284
BspHI	TCATGA	1 cut(s)	670
BspLI	GGNNCC	3 cut(s)	613, 796, 1328
BspMAI	CTGCAG	1 cut(s)	1378
BspOI	GCTAGC	1 cut(s)	536
BspPI	GGATC	3 cut(s)	1229, 1378, 1481
BspTNI	GGTCTC	1 cut(s)	402
BsrBI	CCGCTC	1 cut(s)	1233
BsrDI	GCAATG	3 cut(s)	185, 607, 1069
BsrFI	RCCGGY	1 cut(s)	1329
BsrGI	TGTACA	1 cut(s)	320
BsrI	ACTGG	3 cut(s)	219, 730, 1150
BssAI	RCCGGY	1 cut(s)	1329
BssECI	CCNNGG	1 cut(s)	799
BssMI	GATC	8 cut(s)	460, 514, 616, 736, 846, 1221, 1370, 1473
BssT1I	CCWWGG	1 cut(s)	799
Bst2UI	CCWGG	1 cut(s)	386
Bst4CI	ACNGT	7 cut(s)	361, 396, 794, 995, 1042, 1096, 1455
Bst6I	CTCTTC	1 cut(s)	330
BstAPI	GCANNNNNTGC	1 cut(s)	481
BstAUI	TGTACA	1 cut(s)	320
BstBAI	YACGTR	1 cut(s)	1521
BstC8I	GCNNGC	1 cut(s)	534
BstF5I	GGATG	6 cut(s)	370, 474, 493, 889, 952, 1120
BstKTI	GATC	8 cut(s)	463, 517, 619, 739, 849, 1224, 1373, 1476
BstMAI	GTCTC	3 cut(s)	402, 431, 1233
BstMBI	GATC	8 cut(s)	460, 514, 616, 736, 846, 1221, 1370, 1473
BstMWI	GCNNNNNNNGC	7 cut(s)	26, 47, 101, 481, 538, 1335, 1373
BstNI	CCWGG	1 cut(s)	386
BstNSI	RCATGY	2 cut(s)	651, 974
BstSCI	CCNGG	3 cut(s)	384, 1205, 1265
BstSFI	CTRYAG	1 cut(s)	1374
BstV1I	GCAGC	4 cut(s)	586, 863, 995, 1351
BstX2I	RGATCY	2 cut(s)	1221, 1370
BstXI	CCANNNNNNTGG	2 cut(s)	361, 1115
BstYI	RGATCY	2 cut(s)	1221, 1370
BsuI	GTATCC	1 cut(s)	671
BsuRI	GGCC	3 cut(s)	821, 921, 1107
BtsCI	GGATG	6 cut(s)	370, 474, 493, 889, 952, 1120
BtsIMutI	CAGTG	2 cut(s)	985, 1289
Cac8I	GCNNGC	1 cut(s)	534
CaiI	CAGNNNCTG	2 cut(s)	440, 1059
CciI	TCATGA	1 cut(s)	670
Cfr10I	RCCGGY	1 cut(s)	1329
CseI	GACGC	2 cut(s)	47, 50
Csp6I	GTAC	9 cut(s)	5, 321, 368, 714, 902, 996, 1043, 1510, 1518
CviAII	CATG	9 cut(s)	86, 648, 665, 671, 971, 1111, 1335, 1391, 1527
CviQI	GTAC	9 cut(s)	5, 321, 368, 714, 902, 996, 1043, 1510, 1518
DpnI	GATC	8 cut(s)	462, 516, 618, 738, 848, 1223, 1372, 1475
DpnII	GATC	8 cut(s)	460, 514, 616, 736, 846, 1221, 1370, 1473
DriI	GACNNNNNGTC	1 cut(s)	974
EaeI	YGGCCR	1 cut(s)	819
Eam1104I	CTCTTC	1 cut(s)	330
Eam1105I	GACNNNNNGTC	1 cut(s)	974
EarI	CTCTTC	1 cut(s)	330
EciI	GGCGGA	1 cut(s)	584
Ecl136II	GAGCTC	1 cut(s)	83
Eco130I	CCWWGG	1 cut(s)	799
Eco24I	GRGCYC	1 cut(s)	85
Eco31I	GGTCTC	1 cut(s)	402
Eco53kI	GAGCTC	1 cut(s)	83
Eco57I	CTGAAG	1 cut(s)	563
Eco88I	CYCGRG	1 cut(s)	892
EcoICRI	GAGCTC	1 cut(s)	83
EcoRII	CCWGG	1 cut(s)	384
EcoT14I	CCWWGG	1 cut(s)	799
EcoT22I	ATGCAT	1 cut(s)	1340
EcoT38I	GRGCYC	1 cut(s)	85
ErhI	CCWWGG	1 cut(s)	799
FaeI	CATG	9 cut(s)	89, 651, 668, 674, 974, 1114, 1338, 1394, 1530
FaqI	GGGAC	3 cut(s)	770, 1189, 1300
FatI	CATG	9 cut(s)	85, 647, 664, 670, 970, 1110, 1334, 1390, 1526
FauI	CCCGC	2 cut(s)	1226, 1360
FauNDI	CATATG	1 cut(s)	988
Fnu4HI	GCNGC	5 cut(s)	575, 598, 852, 984, 1365
FokI	GGATG	6 cut(s)	377, 481, 500, 896, 959, 1127
FriOI	GRGCYC	1 cut(s)	85
Fsp4HI	GCNGC	5 cut(s)	575, 598, 852, 984, 1365
FspBI	CTAG	2 cut(s)	533, 963
GluI	GCNGC	5 cut(s)	575, 598, 852, 984, 1365
HaeIII	GGCC	3 cut(s)	821, 921, 1107
HapII	CCGG	3 cut(s)	1207, 1267, 1330
HgaI	GACGC	2 cut(s)	47, 50
Hin1II	CATG	9 cut(s)	89, 651, 668, 674, 974, 1114, 1338, 1394, 1530
HincII	GTYRAC	2 cut(s)	633, 645
HindII	GTYRAC	2 cut(s)	633, 645
HindIII	AAGCTT	1 cut(s)	784
HinfI	GANTC	4 cut(s)	233, 629, 655, 1120
HpaII	CCGG	3 cut(s)	1207, 1267, 1330
HphI	GGTGA	1 cut(s)	229
Hpy166II	GTNNAC	5 cut(s)	323, 633, 645, 723, 1524
Hpy188I	TCNGA	3 cut(s)	136, 208, 1162
Hpy188III	TCNNGA	7 cut(s)	71, 198, 237, 671, 1225, 1346, 1477
Hpy8I	GTNNAC	5 cut(s)	323, 633, 645, 723, 1524
HpyAV	CCTTC	7 cut(s)	71, 136, 259, 286, 303, 538, 668
HpyCH4III	ACNGT	7 cut(s)	361, 396, 794, 995, 1042, 1096, 1455
HpyCH4IV	ACGT	4 cut(s)	496, 1245, 1512, 1520
HpyF10VI	GCNNNNNNNGC	7 cut(s)	26, 47, 101, 481, 538, 1335, 1373
HpySE526I	ACGT	4 cut(s)	496, 1245, 1512, 1520
Hsp92II	CATG	9 cut(s)	89, 651, 668, 674, 974, 1114, 1338, 1394, 1530
Kzo9I	GATC	8 cut(s)	460, 514, 616, 736, 846, 1221, 1370, 1473
LmnI	GCTCC	4 cut(s)	80, 94, 1326, 1435
Lsp1109I	GCAGC	4 cut(s)	586, 863, 995, 1351
LweI	GCATC	5 cut(s)	471, 478, 1307, 1325, 1499
MaeI	CTAG	2 cut(s)	533, 963
MaeII	ACGT	4 cut(s)	496, 1245, 1512, 1520
MaeIII	GTNAC	5 cut(s)	171, 182, 823, 1025, 1186
MalI	GATC	8 cut(s)	462, 516, 618, 738, 848, 1223, 1372, 1475
MbiI	CCGCTC	1 cut(s)	1233
MboI	GATC	8 cut(s)	460, 514, 616, 736, 846, 1221, 1370, 1473
MboII	GAAGA	7 cut(s)	59, 86, 347, 490, 536, 617, 1170
MflI	RGATCY	2 cut(s)	1221, 1370
MhlI	GDGCHC	1 cut(s)	85
MluCI	AATT	6 cut(s)	276, 296, 456, 868, 956, 1321
MlyI	GAGTC	1 cut(s)	638
MmeI	TCCRAC	1 cut(s)	384
MnlI	CCTC	7 cut(s)	4, 307, 337, 400, 499, 1085, 1201
Mph1103I	ATGCAT	1 cut(s)	1340
MseI	TTAA	7 cut(s)	119, 275, 279, 299, 455, 501, 776
MslI	CAYNNNNRTG	3 cut(s)	669, 675, 1113
MspI	CCGG	3 cut(s)	1207, 1267, 1330
MspR9I	CCNGG	3 cut(s)	386, 1207, 1267
Mva1269I	GAATGC	1 cut(s)	1425
MvaI	CCWGG	1 cut(s)	386
MwoI	GCNNNNNNNGC	7 cut(s)	26, 47, 101, 481, 538, 1335, 1373
NciI	CCSGG	2 cut(s)	1207, 1267
NdeI	CATATG	1 cut(s)	988
NdeII	GATC	8 cut(s)	460, 514, 616, 736, 846, 1221, 1370, 1473
NheI	GCTAGC	1 cut(s)	532
NlaIII	CATG	9 cut(s)	89, 651, 668, 674, 974, 1114, 1338, 1394, 1530
NlaIV	GGNNCC	3 cut(s)	613, 796, 1328
NmeAIII	GCCGAG	1 cut(s)	550
NmuCI	GTSAC	1 cut(s)	1186
NsiI	ATGCAT	1 cut(s)	1340
NspI	RCATGY	2 cut(s)	651, 974
PacI	TTAATTAA	1 cut(s)	279
PagI	TCATGA	1 cut(s)	670
PciI	ACATGT	2 cut(s)	647, 970
PctI	GAATGC	1 cut(s)	1425
PfeI	GAWTC	3 cut(s)	233, 655, 1120
PfoI	TCCNGGA	1 cut(s)	1205
PkrI	GCNGC	5 cut(s)	576, 599, 853, 985, 1366
PleI	GAGTC	1 cut(s)	637
PpsI	GAGTC	1 cut(s)	637
Ppu21I	YACGTR	1 cut(s)	1521
PscI	ACATGT	2 cut(s)	647, 970
PshBI	ATTAAT	1 cut(s)	279
Psp124BI	GAGCTC	1 cut(s)	85
Psp6I	CCWGG	1 cut(s)	384
PspGI	CCWGG	1 cut(s)	384
PspN4I	GGNNCC	3 cut(s)	613, 796, 1328
PstI	CTGCAG	1 cut(s)	1378
PstNI	CAGNNNCTG	2 cut(s)	440, 1059
PsuI	RGATCY	2 cut(s)	1221, 1370
RsaI	GTAC	9 cut(s)	6, 322, 369, 715, 903, 997, 1044, 1511, 1519
RsaNI	GTAC	9 cut(s)	5, 321, 368, 714, 902, 996, 1043, 1510, 1518
RseI	CAYNNNNRTG	3 cut(s)	669, 675, 1113
SacI	GAGCTC	1 cut(s)	85
SaqAI	TTAA	7 cut(s)	119, 275, 279, 299, 455, 501, 776
SatI	GCNGC	5 cut(s)	575, 598, 852, 984, 1365
Sau3AI	GATC	8 cut(s)	460, 514, 616, 736, 846, 1221, 1370, 1473
ScaI	AGTACT	1 cut(s)	1044
SchI	GAGTC	1 cut(s)	638
ScrFI	CCNGG	3 cut(s)	386, 1207, 1267
SduI	GDGCHC	1 cut(s)	85
SfaNI	GCATC	5 cut(s)	471, 478, 1307, 1325, 1499
SfcI	CTRYAG	1 cut(s)	1374
SmiMI	CAYNNNNRTG	3 cut(s)	669, 675, 1113
SmlI	CTYRAG	1 cut(s)	1430
SmoI	CTYRAG	1 cut(s)	1430
Sse9I	AATT	6 cut(s)	276, 296, 456, 868, 956, 1321
SsiI	CCGC	6 cut(s)	55, 595, 598, 768, 1233, 1367
SspMI	CTAG	2 cut(s)	533, 963
SstI	GAGCTC	1 cut(s)	85
StyD4I	CCNGG	3 cut(s)	384, 1205, 1265
StyI	CCWWGG	1 cut(s)	799
TaaI	ACNGT	7 cut(s)	361, 396, 794, 995, 1042, 1096, 1455
TaiI	ACGT	4 cut(s)	499, 1248, 1515, 1523
TaqI	TCGA	3 cut(s)	199, 739, 1319
TasI	AATT	6 cut(s)	276, 296, 456, 868, 956, 1321
TatI	WGTACW	3 cut(s)	320, 367, 1042
TauI	GCSGC	1 cut(s)	600
TfiI	GAWTC	3 cut(s)	233, 655, 1120
Tru1I	TTAA	7 cut(s)	119, 275, 279, 299, 455, 501, 776
Tru9I	TTAA	7 cut(s)	119, 275, 279, 299, 455, 501, 776
TscAI	CASTG	2 cut(s)	985, 1296
TseFI	GTSAC	1 cut(s)	1186
TseI	GCWGC	4 cut(s)	574, 851, 983, 1364
Tsp45I	GTSAC	1 cut(s)	1186
TspDTI	ATGAA	4 cut(s)	537, 618, 687, 1379
TspGWI	ACGGA	4 cut(s)	630, 832, 941, 1227
TspRI	CASTG	2 cut(s)	985, 1296
VspI	ATTAAT	1 cut(s)	279
XapI	RAATTY	1 cut(s)	956
XceI	RCATGY	2 cut(s)	651, 974
XspI	CTAG	2 cut(s)	533, 963
ZrmI	AGTACT	1 cut(s)	1044
Zsp2I	ATGCAT	1 cut(s)	1340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.