Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0009792

Physical Location & Seq

Genomic Coordinates Reverse (-)

3991425 .. 3996508

Gene Structure 5084 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g06790.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGTCGCTGGAGGAGGTAGCTAGGAGAGCGATAAAGCACGCGCTCCAGGCTCTGCGGCAGCGGCATTTGCTCGAAGAAGGCGCTCATGCTCCGGCCTACATCGCTCTCGCCAAGCCGATTGCTCAACAGGGCTCGGAATGGAAGGATAAGGCGGAGACTTTGGAGCTGGAGCTTCAGCAGTGCTATAAGGCTCAGTCTCGGCTGTCGGAGCAGCTTGTGGTGGAAGTAGCAGAGACCAGGTCTTCGAAGGCTTTACTCTTGGAGAAAGAAGCAGTGATTGAGGATCAGCAGAAGGAGCTGACTGAAAGGAGGGATGAGTGCTCTCAGTTGAAGGCTGAGTTGGAAAAGAAGATTGAGGCTCTAGAGTTGGTTATGAGTGAGAACAATGAAATACGAGCGCAGCTGGAAGAAATGTCTGTTAGAGCTAAGACTGCTGAGGCTGAAAATAAGGTGTTAATTGACCGCTGGATGTTGGAAAAGATGAGGGATGCTGAACGCCTAAATGAGGCAAATGCTCTATATGAAGATATGCTTGAGCGGATCAGGGCCAGTGGTTTGCAAAAACTTGCCATGCAGCAAGTAGATGGTGTGGTGCGCCAAAGTGAAGAAGGTGCTGAGTACTTTGTGGAATCAACCAATCCATCCACATGCAAGAACAGGATCAATGCCCATGATGGCGGCTGTGCTTCGATATTATTCGAGTACAATTCAGGCAAATTGATCTCTGGAGGACAGGATGGGACAATTAAAACGTGGGATACAAGTACAGGAGCTTTGGCTAATACACTTCATGGTTGCATTGGTTCTGTTCTTGATCTTACCATTACCCATGATAATAGATCTATCATCGCTGCAAGCAGTTCAAACAAATTGTATGTCTGGGATGCTAACTCGGGGAGGGTTCGCCATACTCTCACGGGTCACACGGATAAAGTGTGTGCTGTAGATGTCAGCAAGTTCTCAAGTCGTCACATTGTAAGTGCAGCTTATGATCGTACCATAAAAGTTTGGGATTTGCAGAAAGGCTACTGCACCAACACAATCATCTTCCCCAAACACTGCAATGCTCTCGGCTTCAGTATGGATGGACAGACTATTTGCTCAGGTCATGTTGATGGAAATCTTCGGTTGTGGGATATTCAAAAAGGAAAGCTGCTCAATGAAGTGGCTGCACACTCCAATGCTGTTACATCTATATCTTTGTCACGAAGCGGCAACATGATATTGACCAGTGGGAGGGACAATGTGCATCACCTTTTCGATATGAGAACCCTTGAAGTTTGTGGGACATTGAGAGCCACCGGGAACAGAGTAGCATCTAATTGGAGCCGATCTTGTATCAGTCCAGATGACAGTTACGTCGCAGCTGGATCTGCCGATGGTGCTGTTTATATTTGGTCTATAGCCAAAGCTGACATCGTCAGCACTCTGAAGGAACACACCAACTCTGTCCTCTGCTGCTCATGGAGCGGGCATGGAAAACCACTAGCTTCTGCGGACAAGAATGGAGTAATTTGTACTTGGACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000421 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005776 GO:0006508 GO:0006511 GO:0006807 GO:0006810 GO:0006897 GO:0006907 GO:0006909 GO:0006914 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0016740 GO:0019538 GO:0019776 GO:0019941 GO:0022607 GO:0030163 GO:0030587 GO:0031090 GO:0031154 GO:0032502 GO:0032991 GO:0034274 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048856 GO:0051179 GO:0051234 GO:0051603 GO:0051703 GO:0051704 GO:0061919 GO:0070925 GO:0071704 GO:0071840 GO:0090382 GO:0090702 GO:0098588 GO:0098657 GO:0098805 GO:0099120 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905037 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04140 ko04621 map04136 map04138 map04140 map04621

Pfam Domains

Protein Families

ATG16 WD40

Protein Analysis

510

Amino Acids

56.19

Weight (kDa)

6.09

Isoelectric Point (pI)

36.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATG16	PF08614	42 - 168	7.7e-12	Autophagy protein 16 (ATG16)
WDR55	PF24796	213 - 423	2.2e-18	WDR55
Beta-prop_THOC3	PF25174	213 - 305	5.6e-12	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	214 - 349	6e-24	WDR5 beta-propeller domain
Beta-prop_SCAP	PF24017	215 - 299	4.1e-06	SCAP Beta-propeller
WD40_CDC20-Fz	PF24807	215 - 415	4.1e-22	CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd	PF25047	217 - 341	9.7e-10	TEP-1 second beta-propeller
Beta-prop_WDR3_2nd	PF25172	217 - 296	5.1e-10	WDR3 second beta-propeller domain
Beta-prop_WDR3_1st	PF25173	220 - 349	1e-21	WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	221 - 372	1.4e-16	WDR36/Utp21 second beta-propeller domain
WD40_Gbeta	PF25391	221 - 315	1e-07	G protein beta WD-40 repeat protein
WD40_WDHD1_1st	PF24817	223 - 506	1.5e-29	WDHD1 first WD40 domain
WD40_Prp19	PF24814	227 - 436	1.1e-30	Prp19 WD40 domain
WD40_MABP1-WDR62_2nd	PF24782	236 - 339	9.2e-08	MABP1/WDR62 second WD40 domain
Beta-prop_ACSF4	PF13570	246 - 506	2.9e-08	Beta-alanine-activating enzyme, beta-propeller
Beta-prop_WDR75_1st	PF23869	275 - 357	2.2e-06	WD repeat-containing protein 75 first beta-propeller
WD40_Gbeta	PF25391	278 - 466	8.3e-19	G protein beta WD-40 repeat protein
Beta-prop_WDR90_POC16_2nd	PF23393	280 - 366	9.5e-07	WDR90/POC16, second beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	282 - 416	7.7e-12	WDR36/Utp21 first beta-propeller
Beta-prop_THOC3	PF25174	283 - 507	8.1e-37	THOC3 beta-propeller domain
Beta-prop_EML	PF23409	283 - 421	4.5e-12	Echinoderm microtubule-associated protein first beta-propeller
EIF3I	PF24805	291 - 366	1.5e-08	EIF3I
WD40	PF00400	300 - 338	1.7e-07	WD domain, G-beta repeat
NBCH_WD40	PF20426	300 - 471	4.1e-08	Neurobeachin beta propeller domain
Beta-prop_WDR3_2nd	PF25172	301 - 421	6.7e-13	WDR3 second beta-propeller domain
Beta-prop_SCAP	PF24017	317 - 423	8.9e-06	SCAP Beta-propeller
Beta-prop_EML_2	PF23414	322 - 434	9.6e-12	Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta	PF25391	323 - 500	1.1e-12	G protein beta WD-40 repeat protein
Beta-prop_EML	PF23409	334 - 508	3e-11	Echinoderm microtubule-associated protein first beta-propeller
WD40_CDC20-Fz	PF24807	353 - 493	1.2e-16	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	354 - 440	5.7e-12	WDR3 first beta-propeller domain
EIF3I	PF24805	355 - 455	8.8e-12	EIF3I
Beta-prop_WDR5	PF25175	355 - 439	8.3e-16	WDR5 beta-propeller domain
WD40_MABP1-WDR62_2nd	PF24782	356 - 423	1.1e-06	MABP1/WDR62 second WD40 domain
Beta-prop_CAF1B_HIR1	PF24105	357 - 428	1.2e-06	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	364 - 501	1.2e-08	WDR36/Utp21 second beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	388 - 472	4.7e-06	TEP-1 second beta-propeller
WDR90_beta-prop_4th	PF23342	442 - 506	5.7e-07	WDR90, 4th beta-propeller
Beta-prop_WDR3_1st	PF25173	443 - 508	8.5e-10	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	446 - 508	1.1e-09	WDR5 beta-propeller domain
Beta-prop_EML_2	PF23414	447 - 508	6.4e-07	Echinoderm microtubule-associated protein second beta-propeller
WD40_Prp19	PF24814	447 - 508	2.1e-06	Prp19 WD40 domain
Beta-prop_IFT140_1st	PF23383	449 - 508	9.8e-07	IFT140 first beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0009792)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50230
fragaria_vesca	FvH4_5g06790 FvH4_5g06790
malus_domestica	MD06G1161200.v1.1 MD14G1166400.v1.1
prunus_persica	Prupe.5G160700_v2.0.a1 Prupe.5G160700_v2.0.a1
pyrus_communis	pycom06g14390 pycom14g13900
rosa_chinensis	RchiOBHm_Chr7g0191761 RchiOBHm_Chr7g0191771
rosa_laevigata	RLG00000004427
rosa_multiflora	Rmu_co8375695.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263550
rosa_rugosa	Rorug06G0511200
rosa_samantha	Rh7AG121000 Rh7BG122700 Rh7CG125600 Rh7DG124300
rosa_wichuraiana	Rw7G010300 Rw7G010310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1358
AccBSI	CCGCTC	2 cut(s)	538, 1470
AccII	CGCG	1 cut(s)	41
AciI	CCGC	9 cut(s)	55, 61, 152, 463, 538, 678, 1212, 1470, 1496
AclWI	GGATC	4 cut(s)	291, 548, 668, 1378
AcuI	CTGAAG	3 cut(s)	158, 1060, 1451
AfaI	GTAC	5 cut(s)	620, 704, 766, 997, 1519
AfiI	CCNNNNNNNGG	2 cut(s)	505, 1236
AgsI	TTSAA	4 cut(s)	331, 864, 1142, 1277
AjiI	CACGTC	1 cut(s)	1527
AjnI	CCWGG	2 cut(s)	45, 236
AjuI	GAANNNNNNNTTGG	2 cut(s)	323, 355
Alw21I	GWGCWC	1 cut(s)	323
Alw26I	GTCTC	3 cut(s)	149, 201, 227
AlwI	GGATC	4 cut(s)	291, 548, 668, 1378
AlwNI	CAGNNNCTG	1 cut(s)	52
Ama87I	CYCGRG	1 cut(s)	892
AoxI	GGCC	2 cut(s)	93, 546
ArsI	GACNNNNNNTTYG	6 cut(s)	226, 258, 861, 893, 1080, 1112
AspLEI	GCGC	4 cut(s)	43, 83, 400, 597
AspS9I	GGNCC	1 cut(s)	546
AsuC2I	CCSGG	1 cut(s)	1303
AsuHPI	GGTGA	1 cut(s)	1244
AsuII	TTCGAA	1 cut(s)	245
AvaI	CYCGRG	1 cut(s)	892
BanII	GRGCYC	1 cut(s)	134
BbsI	GAAGAC	1 cut(s)	234
Bbv12I	GWGCWC	1 cut(s)	323
BbvCI	CCTCAGC	1 cut(s)	435
BccI	CCATC	7 cut(s)	578, 649, 668, 731, 1079, 1109, 1373
BcgI	CGANNNNNNTGC	2 cut(s)	1051, 1085
BciT130I	CCWGG	2 cut(s)	47, 238
BciVI	GTATCC	1 cut(s)	751
BcnI	CCSGG	1 cut(s)	1303
BcoDI	GTCTC	3 cut(s)	149, 201, 227
BfaI	CTAG	3 cut(s)	21, 362, 1487
BfmI	CTRYAG	2 cut(s)	942, 1401
BfoI	RGCGCY	1 cut(s)	84
BfuI	GTATCC	1 cut(s)	751
BglII	AGATCT	1 cut(s)	839
BmcAI	AGTACT	1 cut(s)	620
Bme1390I	CCNGG	3 cut(s)	47, 238, 1303
BmeT110I	CYCGRG	1 cut(s)	892
BmgBI	CACGTC	1 cut(s)	1527
BmgT120I	GGNCC	1 cut(s)	546
BmiI	GGNNCC	1 cut(s)	1328
BmrFI	CCNGG	3 cut(s)	47, 238, 1303
BmsI	GCATC	4 cut(s)	478, 874, 1258, 1325
BpiI	GAAGAC	1 cut(s)	234
BpmI	CTGGAG	4 cut(s)	29, 29, 188, 747
Bpu10I	CCTNAGC	2 cut(s)	435, 1102
Bpu14I	TTCGAA	1 cut(s)	245
BpuEI	CTTGAG	2 cut(s)	554, 946
BpuMI	CCSGG	1 cut(s)	1303
BsaBI	GATNNNNATC	1 cut(s)	1119
BsaI	GGTCTC	1 cut(s)	227
Bsc4I	CCNNNNNNNGG	2 cut(s)	505, 1236
Bse1I	ACTGG	2 cut(s)	549, 1230
Bse3DI	GCAATG	1 cut(s)	1069
Bse8I	GATNNNNATC	1 cut(s)	1119
BseBI	CCWGG	2 cut(s)	47, 238
BseGI	GGATG	7 cut(s)	319, 474, 493, 641, 742, 889, 1090
BseJI	GATNNNNATC	1 cut(s)	1119
BseLI	CCNNNNNNNGG	2 cut(s)	505, 1236
BseMI	GCAATG	1 cut(s)	1069
BseMII	CTCAG	6 cut(s)	206, 327, 338, 426, 606, 1116
BseNI	ACTGG	2 cut(s)	549, 1230
BseRI	GAGGAG	1 cut(s)	26
BsgI	GTGCAG	3 cut(s)	1002, 1015, 1155
Bsh1236I	CGCG	1 cut(s)	41
BshFI	GGCC	2 cut(s)	95, 548
BsiHKAI	GWGCWC	1 cut(s)	323
BsiHKCI	CYCGRG	1 cut(s)	892
BsiSI	CCGG	2 cut(s)	92, 1302
BslFI	GGGAC	3 cut(s)	754, 1253, 1300
BslI	CCNNNNNNNGG	2 cut(s)	505, 1236
BsmAI	GTCTC	3 cut(s)	149, 201, 227
BsmFI	GGGAC	3 cut(s)	754, 1253, 1300
BsnI	GGCC	2 cut(s)	95, 548
Bso31I	GGTCTC	1 cut(s)	227
BsoBI	CYCGRG	1 cut(s)	892
Bsp119I	TTCGAA	1 cut(s)	245
Bsp1286I	GDGCHC	2 cut(s)	134, 323
Bsp143I	GATC	9 cut(s)	283, 540, 660, 720, 814, 839, 991, 1331, 1370
BspACI	CCGC	9 cut(s)	55, 61, 152, 463, 538, 678, 1212, 1470, 1496
BspANI	GGCC	2 cut(s)	95, 548
BspCNI	CTCAG	6 cut(s)	205, 328, 337, 427, 607, 1115
BspFNI	CGCG	1 cut(s)	41
BspLI	GGNNCC	1 cut(s)	1328
BspPI	GGATC	4 cut(s)	291, 548, 668, 1378
BspT104I	TTCGAA	1 cut(s)	245
BspTNI	GGTCTC	1 cut(s)	227
BsrBI	CCGCTC	2 cut(s)	538, 1470
BsrDI	GCAATG	1 cut(s)	1069
BsrI	ACTGG	2 cut(s)	549, 1230
BssMI	GATC	9 cut(s)	283, 540, 660, 720, 814, 839, 991, 1331, 1370
Bst2UI	CCWGG	2 cut(s)	47, 238
Bst4CI	ACNGT	1 cut(s)	1355
BstBI	TTCGAA	1 cut(s)	245
BstC8I	GCNNGC	3 cut(s)	39, 856, 1472
BstDEI	CTNAG	7 cut(s)	192, 324, 336, 426, 435, 615, 1102
BstENI	CCTNNNNNAGG	1 cut(s)	503
BstF5I	GGATG	7 cut(s)	319, 474, 493, 641, 742, 889, 1090
BstFNI	CGCG	1 cut(s)	41
BstH2I	RGCGCY	1 cut(s)	84
BstHHI	GCGC	4 cut(s)	43, 83, 400, 597
BstKTI	GATC	9 cut(s)	286, 543, 663, 723, 817, 842, 994, 1334, 1373
BstMAI	GTCTC	3 cut(s)	149, 201, 227
BstMBI	GATC	9 cut(s)	283, 540, 660, 720, 814, 839, 991, 1331, 1370
BstNI	CCWGG	2 cut(s)	47, 238
BstNSI	RCATGY	1 cut(s)	651
BstSCI	CCNGG	3 cut(s)	45, 236, 1301
BstSFI	CTRYAG	2 cut(s)	942, 1401
BstUI	CGCG	1 cut(s)	41
BstV2I	GAAGAC	1 cut(s)	234
BstX2I	RGATCY	2 cut(s)	839, 1370
BstYI	RGATCY	2 cut(s)	839, 1370
BsuI	GTATCC	1 cut(s)	751
BsuRI	GGCC	2 cut(s)	95, 548
BtgZI	GCGATG	2 cut(s)	85, 832
BtrI	CACGTC	1 cut(s)	1527
BtsCI	GGATG	7 cut(s)	319, 474, 493, 641, 742, 889, 1090
BtsI	GCAGTG	3 cut(s)	185, 279, 1057
BtsIMutI	CAGTG	5 cut(s)	185, 279, 556, 1057, 1237
Cac8I	GCNNGC	3 cut(s)	39, 856, 1472
CaiI	CAGNNNCTG	1 cut(s)	52
CfoI	GCGC	4 cut(s)	43, 83, 400, 597
Cfr13I	GGNCC	1 cut(s)	546
CsiI	ACCWGGT	1 cut(s)	236
Csp6I	GTAC	5 cut(s)	619, 703, 765, 996, 1518
CviQI	GTAC	5 cut(s)	619, 703, 765, 996, 1518
DdeI	CTNAG	7 cut(s)	192, 324, 336, 426, 435, 615, 1102
DpnI	GATC	9 cut(s)	285, 542, 662, 722, 816, 841, 993, 1333, 1372
DpnII	GATC	9 cut(s)	283, 540, 660, 720, 814, 839, 991, 1331, 1370
DrdI	GACNNNNNNGTC	1 cut(s)	1358
DseDI	GACNNNNNNGTC	1 cut(s)	1358
EciI	GGCGGA	1 cut(s)	167
Eco24I	GRGCYC	1 cut(s)	134
Eco31I	GGTCTC	1 cut(s)	227
Eco57I	CTGAAG	3 cut(s)	158, 1060, 1451
Eco88I	CYCGRG	1 cut(s)	892
EcoNI	CCTNNNNNAGG	1 cut(s)	503
EcoRII	CCWGG	2 cut(s)	45, 236
EcoT38I	GRGCYC	1 cut(s)	134
FalI	AAGNNNNNCTT	4 cut(s)	516, 548, 970, 1002
FaqI	GGGAC	3 cut(s)	754, 1253, 1300
FauI	CCCGC	1 cut(s)	1463
FokI	GGATG	7 cut(s)	326, 481, 500, 628, 749, 896, 1097
FriOI	GRGCYC	1 cut(s)	134
FspBI	CTAG	3 cut(s)	21, 362, 1487
GlaI	GCGC	4 cut(s)	42, 82, 399, 596
GsuI	CTGGAG	4 cut(s)	29, 29, 188, 747
HaeII	RGCGCY	1 cut(s)	84
HaeIII	GGCC	2 cut(s)	95, 548
HapII	CCGG	2 cut(s)	92, 1302
HhaI	GCGC	4 cut(s)	43, 83, 400, 597
Hin6I	GCGC	4 cut(s)	41, 81, 398, 595
HinP1I	GCGC	4 cut(s)	41, 81, 398, 595
HinfI	GANTC	1 cut(s)	629
HpaII	CCGG	2 cut(s)	92, 1302
HphI	GGTGA	1 cut(s)	1244
Hpy188I	TCNGA	3 cut(s)	136, 208, 1431
Hpy188III	TCNNGA	5 cut(s)	362, 726, 812, 1206, 1346
Hpy99I	CGWCG	1 cut(s)	1364
HpyAV	CCTTC	7 cut(s)	71, 136, 241, 286, 325, 602, 1426
HpyCH4III	ACNGT	1 cut(s)	1355
HpyCH4IV	ACGT	3 cut(s)	752, 1359, 1526
HpyF3I	CTNAG	7 cut(s)	192, 324, 336, 426, 435, 615, 1102
HpySE526I	ACGT	3 cut(s)	752, 1359, 1526
HspAI	GCGC	4 cut(s)	41, 81, 398, 595
Kzo9I	GATC	9 cut(s)	283, 540, 660, 720, 814, 839, 991, 1331, 1370
LmnI	GCTCC	9 cut(s)	48, 94, 163, 169, 208, 295, 770, 1326, 1467
LweI	GCATC	4 cut(s)	478, 874, 1258, 1325
MabI	ACCWGGT	1 cut(s)	236
MaeI	CTAG	3 cut(s)	21, 362, 1487
MaeII	ACGT	3 cut(s)	752, 1359, 1526
MaeIII	GTNAC	5 cut(s)	920, 968, 1186, 1203, 1355
MalI	GATC	9 cut(s)	285, 542, 662, 722, 816, 841, 993, 1333, 1372
MbiI	CCGCTC	2 cut(s)	538, 1470
MboI	GATC	9 cut(s)	283, 540, 660, 720, 814, 839, 991, 1331, 1370
MboII	GAAGA	8 cut(s)	86, 234, 361, 419, 536, 617, 1039, 1115
MflI	RGATCY	2 cut(s)	839, 1370
MhlI	GDGCHC	2 cut(s)	134, 323
MluCI	AATT	7 cut(s)	456, 706, 716, 744, 869, 1321, 1512
MmeI	TCCRAC	3 cut(s)	186, 321, 453
MseI	TTAA	2 cut(s)	455, 747
MslI	CAYNNNNRTG	4 cut(s)	646, 1062, 1113, 1179
MspA1I	CMGCKG	4 cut(s)	61, 403, 465, 1367
MspI	CCGG	2 cut(s)	92, 1302
MspR9I	CCNGG	3 cut(s)	47, 238, 1303
MvaI	CCWGG	2 cut(s)	47, 238
MvnI	CGCG	1 cut(s)	41
NciI	CCSGG	1 cut(s)	1303
NdeII	GATC	9 cut(s)	283, 540, 660, 720, 814, 839, 991, 1331, 1370
NlaIV	GGNNCC	1 cut(s)	1328
NmeAIII	GCCGAG	2 cut(s)	178, 1050
NmuCI	GTSAC	3 cut(s)	920, 968, 1203
NspI	RCATGY	1 cut(s)	651
NspV	TTCGAA	1 cut(s)	245
PfeI	GAWTC	1 cut(s)	629
PflFI	GACNNNGTC	2 cut(s)	238, 1418
Psp6I	CCWGG	2 cut(s)	45, 236
PspGI	CCWGG	2 cut(s)	45, 236
PspN4I	GGNNCC	1 cut(s)	1328
PspPI	GGNCC	1 cut(s)	546
PstNI	CAGNNNCTG	1 cut(s)	52
PsuI	RGATCY	2 cut(s)	839, 1370
PsyI	GACNNNGTC	2 cut(s)	238, 1418
PvuII	CAGCTG	2 cut(s)	403, 1367
RsaI	GTAC	5 cut(s)	620, 704, 766, 997, 1519
RsaNI	GTAC	5 cut(s)	619, 703, 765, 996, 1518
RseI	CAYNNNNRTG	4 cut(s)	646, 1062, 1113, 1179
SaqAI	TTAA	2 cut(s)	455, 747
Sau3AI	GATC	9 cut(s)	283, 540, 660, 720, 814, 839, 991, 1331, 1370
Sau96I	GGNCC	1 cut(s)	546
ScaI	AGTACT	1 cut(s)	620
ScrFI	CCNGG	3 cut(s)	47, 238, 1303
SduI	GDGCHC	2 cut(s)	134, 323
SexAI	ACCWGGT	1 cut(s)	236
SfaNI	GCATC	4 cut(s)	478, 874, 1258, 1325
SfcI	CTRYAG	2 cut(s)	942, 1401
SfuI	TTCGAA	1 cut(s)	245
SmiMI	CAYNNNNRTG	4 cut(s)	646, 1062, 1113, 1179
SmlI	CTYRAG	2 cut(s)	533, 961
SmoI	CTYRAG	2 cut(s)	533, 961
Sse9I	AATT	7 cut(s)	456, 706, 716, 744, 869, 1321, 1512
SsiI	CCGC	9 cut(s)	55, 61, 152, 463, 538, 678, 1212, 1470, 1496
SspMI	CTAG	3 cut(s)	21, 362, 1487
StyD4I	CCNGG	3 cut(s)	45, 236, 1301
TaaI	ACNGT	1 cut(s)	1355
TaiI	ACGT	3 cut(s)	755, 1362, 1529
TaqI	TCGA	5 cut(s)	72, 245, 689, 699, 1260
TasI	AATT	7 cut(s)	456, 706, 716, 744, 869, 1321, 1512
TatI	WGTACW	4 cut(s)	618, 702, 764, 1517
TauI	GCSGC	4 cut(s)	58, 64, 681, 1215
TfiI	GAWTC	1 cut(s)	629
Tru1I	TTAA	2 cut(s)	455, 747
Tru9I	TTAA	2 cut(s)	455, 747
TscAI	CASTG	5 cut(s)	185, 279, 556, 1064, 1237
TseFI	GTSAC	3 cut(s)	920, 968, 1203
Tsp45I	GTSAC	3 cut(s)	920, 968, 1203
TspDTI	ATGAA	4 cut(s)	402, 537, 779, 1176
TspGWI	ACGGA	1 cut(s)	941
TspRI	CASTG	5 cut(s)	185, 279, 556, 1064, 1237
Tth111I	GACNNNGTC	2 cut(s)	238, 1418
XagI	CCTNNNNNAGG	1 cut(s)	503
XbaI	TCTAGA	1 cut(s)	361
XceI	RCATGY	1 cut(s)	651
XspI	CTAG	3 cut(s)	21, 362, 1487
ZrmI	AGTACT	1 cut(s)	620

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.