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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G55610 AT5G55610 |
| fragaria_vesca | FvH4_3g29460 |
| malus_domestica | MD00G1099100.v1.1 MD11G1201600.v1.1 |
| prunus_persica | Prupe.4G240000_v2.0.a1 |
| pyrus_communis | pycom03g13850 pycom11g17410 |
| rosa_chinensis | RchiOBHm_Chr5g0053951 RchiOBHm_Chr5g0077271 |
| rosa_laevigata | RLG00000034912 RLG00000036679 |
| rosa_multiflora | Rmu_sc0008383.1_g000005 Rmu_sc0023670.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00004720 Rroxscaffold_1G00026690 |
| rosa_rugosa | Rorug05G0284700 Rorug05G0453200 |
| rosa_samantha | Rh5AG354000 Rh5AG508300 Rh5BG365800 Rh5BG529500 Rh5CG390600 Rh5CG554000 Rh5DG380700 Rh5DG542000 |
| rosa_wichuraiana | Rw0G002080 Rw5G033370 Rw5G046930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 839, 920 |
| AciI | CCGC | 8 cut(s) | 5, 81, 87, 90, 93, 108, 227, 436 |
| AclWI | GGATC | 3 cut(s) | 339, 804, 917 |
| AcuI | CTGAAG | 2 cut(s) | 53, 375 |
| AfaI | GTAC | 1 cut(s) | 828 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 899 |
| AflIII | ACRYGT | 1 cut(s) | 625 |
| AgsI | TTSAA | 4 cut(s) | 524, 701, 713, 977 |
| AjnI | CCWGG | 1 cut(s) | 672 |
| AleI | CACNNNNGTG | 1 cut(s) | 500 |
| AluBI | AGCT | 3 cut(s) | 14, 791, 980 |
| AluI | AGCT | 3 cut(s) | 14, 791, 980 |
| Alw26I | GTCTC | 3 cut(s) | 485, 550, 921 |
| AlwI | GGATC | 3 cut(s) | 339, 804, 917 |
| Ama87I | CYCGRG | 1 cut(s) | 746 |
| AoxI | GGCC | 2 cut(s) | 306, 901 |
| ApeKI | GCWGC | 8 cut(s) | 104, 176, 179, 182, 238, 422, 683, 854 |
| AspLEI | GCGC | 3 cut(s) | 839, 920, 922 |
| AspS9I | GGNCC | 3 cut(s) | 267, 901, 938 |
| AsuC2I | CCSGG | 1 cut(s) | 868 |
| AvaI | CYCGRG | 1 cut(s) | 746 |
| AvaII | GGWCC | 2 cut(s) | 267, 938 |
| BaeGI | GKGCMC | 1 cut(s) | 325 |
| BbsI | GAAGAC | 1 cut(s) | 974 |
| BbvI | GCAGC | 8 cut(s) | 91, 163, 166, 169, 250, 409, 695, 841 |
| BccI | CCATC | 1 cut(s) | 937 |
| BceAI | ACGGC | 1 cut(s) | 402 |
| BciT130I | CCWGG | 1 cut(s) | 674 |
| BcnI | CCSGG | 1 cut(s) | 868 |
| BcoDI | GTCTC | 3 cut(s) | 485, 550, 921 |
| BfaI | CTAG | 3 cut(s) | 129, 156, 264 |
| BfmI | CTRYAG | 4 cut(s) | 336, 423, 718, 962 |
| BglII | AGATCT | 1 cut(s) | 25 |
| Bme1390I | CCNGG | 2 cut(s) | 674, 868 |
| Bme18I | GGWCC | 2 cut(s) | 267, 938 |
| BmeT110I | CYCGRG | 1 cut(s) | 746 |
| BmgT120I | GGNCC | 3 cut(s) | 267, 901, 938 |
| BmiI | GGNNCC | 2 cut(s) | 378, 865 |
| BmrFI | CCNGG | 2 cut(s) | 674, 868 |
| BmsI | GCATC | 2 cut(s) | 163, 695 |
| BpiI | GAAGAC | 1 cut(s) | 974 |
| Bpu10I | CCTNAGC | 1 cut(s) | 792 |
| BpuMI | CCSGG | 1 cut(s) | 868 |
| BsaI | GGTCTC | 1 cut(s) | 485 |
| BsaJI | CCNNGG | 5 cut(s) | 202, 270, 673, 747, 897 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 899 |
| Bse1I | ACTGG | 1 cut(s) | 296 |
| Bse3DI | GCAATG | 1 cut(s) | 336 |
| BseBI | CCWGG | 1 cut(s) | 674 |
| BseDI | CCNNGG | 5 cut(s) | 202, 270, 673, 747, 897 |
| BseGI | GGATG | 3 cut(s) | 235, 403, 583 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 899 |
| BseMI | GCAATG | 1 cut(s) | 336 |
| BseMII | CTCAG | 3 cut(s) | 527, 599, 620 |
| BseNI | ACTGG | 1 cut(s) | 296 |
| BsePI | GCGCGC | 1 cut(s) | 918 |
| BseRI | GAGGAG | 1 cut(s) | 779 |
| BseSI | GKGCMC | 1 cut(s) | 325 |
| BseXI | GCAGC | 8 cut(s) | 91, 163, 166, 169, 250, 409, 695, 841 |
| BseYI | CCCAGC | 1 cut(s) | 922 |
| Bsh1236I | CGCG | 2 cut(s) | 839, 920 |
| BshFI | GGCC | 2 cut(s) | 308, 903 |
| BsiHKCI | CYCGRG | 1 cut(s) | 746 |
| BsiSI | CCGG | 1 cut(s) | 867 |
| BslFI | GGGAC | 1 cut(s) | 876 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 899 |
| BsmAI | GTCTC | 3 cut(s) | 485, 550, 921 |
| BsmFI | GGGAC | 1 cut(s) | 876 |
| BsnI | GGCC | 2 cut(s) | 308, 903 |
| Bso31I | GGTCTC | 1 cut(s) | 485 |
| BsoBI | CYCGRG | 1 cut(s) | 746 |
| Bsp1286I | GDGCHC | 1 cut(s) | 325 |
| Bsp143I | GATC | 4 cut(s) | 25, 344, 796, 909 |
| BspACI | CCGC | 8 cut(s) | 5, 81, 87, 90, 93, 108, 227, 436 |
| BspANI | GGCC | 2 cut(s) | 308, 903 |
| BspCNI | CTCAG | 3 cut(s) | 528, 598, 619 |
| BspFNI | CGCG | 2 cut(s) | 839, 920 |
| BspLI | GGNNCC | 2 cut(s) | 378, 865 |
| BspMAI | CTGCAG | 2 cut(s) | 427, 966 |
| BspPI | GGATC | 3 cut(s) | 339, 804, 917 |
| BspTNI | GGTCTC | 1 cut(s) | 485 |
| BsrDI | GCAATG | 1 cut(s) | 336 |
| BsrI | ACTGG | 1 cut(s) | 296 |
| BssECI | CCNNGG | 5 cut(s) | 202, 270, 673, 747, 897 |
| BssHII | GCGCGC | 1 cut(s) | 918 |
| BssMI | GATC | 4 cut(s) | 25, 344, 796, 909 |
| BssT1I | CCWWGG | 2 cut(s) | 202, 270 |
| Bst2UI | CCWGG | 1 cut(s) | 674 |
| Bst4CI | ACNGT | 3 cut(s) | 340, 499, 826 |
| Bst6I | CTCTTC | 3 cut(s) | 143, 756, 978 |
| BstC8I | GCNNGC | 4 cut(s) | 531, 789, 920, 962 |
| BstDEI | CTNAG | 7 cut(s) | 48, 536, 585, 606, 659, 792, 844 |
| BstDSI | CCRYGG | 1 cut(s) | 897 |
| BstF5I | GGATG | 3 cut(s) | 235, 403, 583 |
| BstFNI | CGCG | 2 cut(s) | 839, 920 |
| BstHHI | GCGC | 3 cut(s) | 839, 920, 922 |
| BstKTI | GATC | 4 cut(s) | 28, 347, 799, 912 |
| BstMAI | GTCTC | 3 cut(s) | 485, 550, 921 |
| BstMBI | GATC | 4 cut(s) | 25, 344, 796, 909 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 11, 89, 101, 113, 122, 182, 863 |
| BstNI | CCWGG | 1 cut(s) | 674 |
| BstNSI | RCATGY | 1 cut(s) | 629 |
| BstSCI | CCNGG | 2 cut(s) | 672, 866 |
| BstSFI | CTRYAG | 4 cut(s) | 336, 423, 718, 962 |
| BstSLI | GKGCMC | 1 cut(s) | 325 |
| BstUI | CGCG | 2 cut(s) | 839, 920 |
| BstV1I | GCAGC | 8 cut(s) | 91, 163, 166, 169, 250, 409, 695, 841 |
| BstV2I | GAAGAC | 1 cut(s) | 974 |
| BstX2I | RGATCY | 3 cut(s) | 25, 344, 796 |
| BstYI | RGATCY | 3 cut(s) | 25, 344, 796 |
| BsuRI | GGCC | 2 cut(s) | 308, 903 |
| BtgI | CCRYGG | 1 cut(s) | 897 |
| BtsCI | GGATG | 3 cut(s) | 235, 403, 583 |
| BtsIMutI | CAGTG | 1 cut(s) | 345 |
| Cac8I | GCNNGC | 4 cut(s) | 531, 789, 920, 962 |
| CfoI | GCGC | 3 cut(s) | 839, 920, 922 |
| Cfr13I | GGNCC | 3 cut(s) | 267, 901, 938 |
| CseI | GACGC | 3 cut(s) | 114, 230, 828 |
| Csp6I | GTAC | 1 cut(s) | 827 |
| CviAII | CATG | 3 cut(s) | 561, 626, 690 |
| CviQI | GTAC | 1 cut(s) | 827 |
| DdeI | CTNAG | 7 cut(s) | 48, 536, 585, 606, 659, 792, 844 |
| DpnI | GATC | 4 cut(s) | 27, 346, 798, 911 |
| DpnII | GATC | 4 cut(s) | 25, 344, 796, 909 |
| DraI | TTTAAA | 1 cut(s) | 640 |
| Eam1104I | CTCTTC | 3 cut(s) | 143, 756, 978 |
| EarI | CTCTTC | 3 cut(s) | 143, 756, 978 |
| EciI | GGCGGA | 2 cut(s) | 70, 76 |
| Eco130I | CCWWGG | 2 cut(s) | 202, 270 |
| Eco31I | GGTCTC | 1 cut(s) | 485 |
| Eco32I | GATATC | 1 cut(s) | 780 |
| Eco47I | GGWCC | 2 cut(s) | 267, 938 |
| Eco57I | CTGAAG | 2 cut(s) | 53, 375 |
| Eco88I | CYCGRG | 1 cut(s) | 746 |
| EcoRII | CCWGG | 1 cut(s) | 672 |
| EcoRV | GATATC | 1 cut(s) | 780 |
| EcoT14I | CCWWGG | 2 cut(s) | 202, 270 |
| ErhI | CCWWGG | 2 cut(s) | 202, 270 |
| FaeI | CATG | 3 cut(s) | 564, 629, 693 |
| FaqI | GGGAC | 1 cut(s) | 876 |
| FatI | CATG | 3 cut(s) | 560, 625, 689 |
| FokI | GGATG | 3 cut(s) | 242, 410, 590 |
| FspBI | CTAG | 3 cut(s) | 129, 156, 264 |
| GlaI | GCGC | 3 cut(s) | 838, 919, 921 |
| GsaI | CCCAGC | 1 cut(s) | 926 |
| HaeIII | GGCC | 2 cut(s) | 308, 903 |
| HapII | CCGG | 1 cut(s) | 867 |
| HgaI | GACGC | 3 cut(s) | 114, 230, 828 |
| HhaI | GCGC | 3 cut(s) | 839, 920, 922 |
| Hin1II | CATG | 3 cut(s) | 564, 629, 693 |
| Hin6I | GCGC | 3 cut(s) | 837, 918, 920 |
| HinP1I | GCGC | 3 cut(s) | 837, 918, 920 |
| HincII | GTYRAC | 1 cut(s) | 245 |
| HindII | GTYRAC | 1 cut(s) | 245 |
| HinfI | GANTC | 3 cut(s) | 516, 678, 970 |
| HpaII | CCGG | 1 cut(s) | 867 |
| Hpy166II | GTNNAC | 1 cut(s) | 245 |
| Hpy188I | TCNGA | 6 cut(s) | 394, 513, 537, 609, 803, 942 |
| Hpy188III | TCNNGA | 2 cut(s) | 733, 775 |
| Hpy8I | GTNNAC | 1 cut(s) | 245 |
| HpyAV | CCTTC | 1 cut(s) | 82 |
| HpyCH4III | ACNGT | 3 cut(s) | 340, 499, 826 |
| HpyCH4V | TGCA | 5 cut(s) | 185, 238, 329, 425, 964 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 11, 89, 101, 113, 122, 182, 863 |
| HpyF3I | CTNAG | 7 cut(s) | 48, 536, 585, 606, 659, 792, 844 |
| Hsp92II | CATG | 3 cut(s) | 564, 629, 693 |
| HspAI | GCGC | 3 cut(s) | 837, 918, 920 |
| Kzo9I | GATC | 4 cut(s) | 25, 344, 796, 909 |
| LmnI | GCTCC | 3 cut(s) | 121, 376, 863 |
| Lsp1109I | GCAGC | 8 cut(s) | 91, 163, 166, 169, 250, 409, 695, 841 |
| LweI | GCATC | 2 cut(s) | 163, 695 |
| MaeI | CTAG | 3 cut(s) | 129, 156, 264 |
| MaeIII | GTNAC | 2 cut(s) | 502, 665 |
| MalI | GATC | 4 cut(s) | 27, 346, 798, 911 |
| MboI | GATC | 4 cut(s) | 25, 344, 796, 909 |
| MflI | RGATCY | 3 cut(s) | 25, 344, 796 |
| MhlI | GDGCHC | 1 cut(s) | 325 |
| MluCI | AATT | 1 cut(s) | 480 |
| MlyI | GAGTC | 2 cut(s) | 525, 964 |
| MseI | TTAA | 4 cut(s) | 462, 639, 741, 988 |
| MslI | CAYNNNNRTG | 1 cut(s) | 500 |
| MspA1I | CMGCKG | 1 cut(s) | 95 |
| MspI | CCGG | 1 cut(s) | 867 |
| MspR9I | CCNGG | 2 cut(s) | 674, 868 |
| MvaI | CCWGG | 1 cut(s) | 674 |
| MvnI | CGCG | 2 cut(s) | 839, 920 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 11, 89, 101, 113, 122, 182, 863 |
| NciI | CCSGG | 1 cut(s) | 868 |
| NdeII | GATC | 4 cut(s) | 25, 344, 796, 909 |
| NlaIII | CATG | 3 cut(s) | 564, 629, 693 |
| NlaIV | GGNNCC | 2 cut(s) | 378, 865 |
| NmeAIII | GCCGAG | 1 cut(s) | 284 |
| NmuCI | GTSAC | 2 cut(s) | 502, 665 |
| NspI | RCATGY | 1 cut(s) | 629 |
| OliI | CACNNNNGTG | 1 cut(s) | 500 |
| PauI | GCGCGC | 1 cut(s) | 918 |
| PciI | ACATGT | 1 cut(s) | 625 |
| PfeI | GAWTC | 1 cut(s) | 678 |
| PleI | GAGTC | 2 cut(s) | 524, 964 |
| PpsI | GAGTC | 2 cut(s) | 524, 964 |
| PscI | ACATGT | 1 cut(s) | 625 |
| Psp6I | CCWGG | 1 cut(s) | 672 |
| PspFI | CCCAGC | 1 cut(s) | 922 |
| PspGI | CCWGG | 1 cut(s) | 672 |
| PspN4I | GGNNCC | 2 cut(s) | 378, 865 |
| PspPI | GGNCC | 3 cut(s) | 267, 901, 938 |
| PstI | CTGCAG | 2 cut(s) | 427, 966 |
| PsuI | RGATCY | 3 cut(s) | 25, 344, 796 |
| PteI | GCGCGC | 1 cut(s) | 918 |
| RsaI | GTAC | 1 cut(s) | 828 |
| RsaNI | GTAC | 1 cut(s) | 827 |
| RseI | CAYNNNNRTG | 1 cut(s) | 500 |
| SaqAI | TTAA | 4 cut(s) | 462, 639, 741, 988 |
| Sau3AI | GATC | 4 cut(s) | 25, 344, 796, 909 |
| Sau96I | GGNCC | 3 cut(s) | 267, 901, 938 |
| SchI | GAGTC | 2 cut(s) | 525, 964 |
| ScrFI | CCNGG | 2 cut(s) | 674, 868 |
| SduI | GDGCHC | 1 cut(s) | 325 |
| SetI | ASST | 7 cut(s) | 16, 134, 204, 269, 667, 793, 982 |
| SfaNI | GCATC | 2 cut(s) | 163, 695 |
| SfcI | CTRYAG | 4 cut(s) | 336, 423, 718, 962 |
| SinI | GGWCC | 2 cut(s) | 267, 938 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 500 |
| Sse9I | AATT | 1 cut(s) | 480 |
| SsiI | CCGC | 8 cut(s) | 5, 81, 87, 90, 93, 108, 227, 436 |
| SspMI | CTAG | 3 cut(s) | 129, 156, 264 |
| StyD4I | CCNGG | 2 cut(s) | 672, 866 |
| StyI | CCWWGG | 2 cut(s) | 202, 270 |
| TaaI | ACNGT | 3 cut(s) | 340, 499, 826 |
| TaqI | TCGA | 1 cut(s) | 774 |
| TasI | AATT | 1 cut(s) | 480 |
| TauI | GCSGC | 3 cut(s) | 92, 95, 110 |
| TfiI | GAWTC | 1 cut(s) | 678 |
| Tru1I | TTAA | 4 cut(s) | 462, 639, 741, 988 |
| Tru9I | TTAA | 4 cut(s) | 462, 639, 741, 988 |
| TscAI | CASTG | 1 cut(s) | 345 |
| TseFI | GTSAC | 2 cut(s) | 502, 665 |
| TseI | GCWGC | 8 cut(s) | 104, 176, 179, 182, 238, 422, 683, 854 |
| Tsp45I | GTSAC | 2 cut(s) | 502, 665 |
| TspGWI | ACGGA | 2 cut(s) | 229, 878 |
| TspRI | CASTG | 1 cut(s) | 345 |
| VpaK11BI | GGWCC | 2 cut(s) | 267, 938 |
| XceI | RCATGY | 1 cut(s) | 629 |
| XspI | CTAG | 3 cut(s) | 129, 156, 264 |