AT5G56890

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0001069
Physical Location & Seq
Reverse (-)
23010423 .. 23016015
5593 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G56890.1

Sequence Viewer

Length: 3342 bp
ATGGAGAATTTGACTCTCCTCCTTAGGATCTGTCTTGTTTCGTCGGTTTTAGTTGCTGCTTCTTCCTCAGGATCGGAATTGTTATCTCCGTTATCATCACCACCGTCTCCATTACCCGAAACTTCAAAAGGGTTTGGTCAAGCACCGAGTAATTCACCTGAATCTCACAAATCCGACAATGTGCCACCGTCTAAAGCTTCTTCTCAACCGTCTCTTCCTCCTTTAGCTGATTTGGCAGCTCCACCACCGTCAGATTCCGTCGGAGGTAAAGCACCGGCCGGTGTGCCTGTTGTCTTTGTTCCTAATGCTCCAGCTCCAGCTACAATACCCGTTAAGGATTTGCCCGTAGCTTCGCCTCCGGTTCTTCAACCCATTACACCGATTGCTTCACCACCTCGATTCATTCCAGGAGATGCACCAAAGGAGCCTCCTTTCTCAGGAAGAGTTACTCCAGCCCCGGTTTCATCACCTGTTTCGGATATTCCTCCAATTCCATCAGTGGCTCTGCCTCCGCCTACACCGAGCAATGTACCTCCTAGAAATGCTTCTAACAATCACAAGCCTCCTCCTATCGAAAAGTCTATTGCTCCTGTTGCATCACCACCAACAATATCAATTGACATTGCACCACCAGTACATCCCGTCATACCTAAGTTAACACCCTCGAGCTCACCTGTACCTACCTCGACTCCAACTAAGGGATCTCCGAGAAGAAATCCGCCAACTACCCACCCAGTTTTCCCCATAGAATCTCCTGCTGTCTCACCAGATCATGCTGCAAATCCAGTAAAACATCCGCCCCCCAGCGATAACGGAGATGATAGTAAAAGTCCGGGTGCTGCACCGGCAAATGAAACTGCTAAACCCTTACCTGTCTTCCCACATAAAGCTTCTCCTCCTTCGATTGCTCCCTCAGCCCCAAAATTTAACAGACACTCTCATCATACATCTCCATCTACTACTCCACCGCCAGATTCTACTCCTAGTAATGTACACCACCATCCTTCATCACCATCTCCTCCTCCTCTATCTTCACACCATCAACATCATCAAGAACGAAAGAAAATCGCAGATAGTCCAGCTCCTTCACCACTGCCACCGCATCTCATATCTCCAAAGAAGTCAAACCGTAAAGGTTCAATGACTCCTCCTCCACAATCGCACCATGCTCCTTCTCCTCCCATTCCTGATTCTTTGATTTCTCCTGCTCACGCTCCAGTCTCTTTCTCTATGAAACGCATCTCCCCGGCTCTAGCACCTTCTCCAACCCAAGTGTTTCCTCTCAGGTCCTCTTCAAGACCTTCAAAATCTCGGAAATTCCCTCTAGGTCCACCTCTTCAAGCATTTCCTCCTCCTCCCCCTAATTCAGATTGTTCTTCAACTATTTGTTTGGAACCGTACACAAACACACCTCCGGGATCTCCATGTGGCTGTGTCTGGCCAATTCAAGTTGAGCTACGCCTTAGCATGGCGCTCTACGACTTCTTCCCAATGGTTTCAGAATTTGCTCGGGAAATCAGCGCCGGAGTTTTCATGAAACAGAGCCAAGTCCGTATAATGGGAGCTAACGCGGCCAGCGAACAACCTGAGAAATCCATTGTTCTAATCGATTTAGTACCGCTTGGAGATAAATTCGATAACATGACTGCAATGCTGACTTACCAGAGATTCTGGAGTAAAAAAGTCTATATAGATGAACCAATCTTTGGCGGATACGACGTGATTTACGTGCGTTATCCTGGTTTACCCGCTTCCCCGCCAACTTCTGGTATGACCATTATAGATCAAGGACCGTACTCTGGTAATAATAACGGAAGGGCGGTCAAACCGCTCGGAGTTGATGTTCCAAGGAAGCCGCGCAAGAAAGAGCTCAATGGTGGAAGTATTGCTGTGATTGTTTTATCCGCAGCTGCTTTTATCGGTTTATGTTTCGTTATCGTTTGGTTCTTGGTTTTCCGGCGACAAAGAGATCGACGACGTCTTTCGAAAAGAACACCACTTGCTCGCCCTTCACTGCCTTCCCTCTCGAAACCATCAGGCTCGGCGAGATCTTTAACTGGAAGCCGATTTAGCTCAACTTCATTGTCATTTGAATCCAGCATTGCTCCGTTTACTCTCTCTGCAAAGACTTTCACCGCAAGTGAAATAATGAAAGCTACAAATAACTTTGATGAATCGAGGGTTCTTGGTGAAGGCGGATTTGGACGAGTTTACGAAGGTGTTTTCGATGACGGAACTAAAGTAGCAGTTAAGGTATTGAAGAGAGATGACCAGCAAGGTAGCAGGGAGTTCTTAGCCGAAGTGGAAATGCTTAGTCGTCTTCATCACAGAAACCTCGTGAATTTAATTGGTATTTGTATCGAAGATCGTAACCGTTCCCTGGTTTATGAACTCATACCAAATGGCAGCGTTGAATCTCACCTCCACGGGATTGATAAAGCATCTTCGCCTTTAGATTGGGATGCTCGGTTGAAGATAGCTCTTGGTGCGGCCCGTGGTTTAGCGTATTTACACGAAGACTCGAGCCCGCGAGTTATACACAGAGACTTCAAGTCCAGCAACATCTTGCTGGAAAACGATTTCACACCTAAAGTATCTGACTTTGGATTGGCTCGTAACGCCCTTGATGATGAAGATAACAGACATATATCGACACGCGTTATGGGAACGTTTGGGTATGTGGCACCGGAATACGCAATGACAGGGCATCTTTTGGTGAAGAGTGATGTGTATAGTTACGGAGTTGTGCTTCTCGAGCTACTTACAGGGCGGAAACCAGTGGATATGTCTCAACCGCCCGGACAAGAGAACTTAGTTTCATGGACTCGGCCTTTTCTTACGAGTGCAGAAGGGCTTGCAGCTATTATAGATCAGTCTTTAGGACCCGAGATCTCATTCGATAGCATAGCTAAAGTCGCGGCAATAGCTTCTATGTGCGTTCAACCAGAAGTATCACACCGTCCTTTCATGGGAGAAGTAGTGCAAGCTTTGAAACTTGTCAGCAACGAATGTGATGAAGCTAAAGAACTCAATTCTTTAACTTCTATCTCTAAAGACGATTTTAGAGATGACACTCAAGCTGAGAGCTCTTGTGGTGACAGCTCAGCAAGGATGGCTCGGTATCCATTGCTACCAAATTACGACTCTGAGCCTGATACAGAGAGAGGATTATCTACATCGGAAATGTACACGGGGTCAGGGAGGTTCGAGAGACAGTCTAACTCGGGTCCCTTGACCTCGGGTCGAGGCAAGAGTTTCTGGCAAAAGATGAGGAGATTATCGACCGGAAGCTTGAGTGAGCATGGAACACCAACGGTCATGTTACGATCCGGTTCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr

Protein Analysis

1113

Amino Acids

119.24

Weight (kDa)

8.98

Isoelectric Point (pI)

64.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALE2_N PF23180 465 - 583 2.1e-57 Receptor-like PK ALE2 N-terminal domain
Pkinase PF00069 724 - 932 1.1e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 726 - 997 3.2e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1981
AccB1I GGYRCC 1 cut(s) 2683
AccB7I CCANNNNNTGG 2 cut(s) 1706, 1766
AccBSI CCGCTC 1 cut(s) 1831
AccII CGCG 5 cut(s) 1571, 1858, 2530, 2658, 2918
AclI AACGTT 1 cut(s) 2669
AclWI GGATC 5 cut(s) 35, 79, 709, 1426, 3321
AcoI YGGCCR 3 cut(s) 276, 1439, 1572
AcsI RAATTY 6 cut(s) 7, 923, 1316, 1502, 1631, 2341
AcyI GRCGYC 1 cut(s) 1978
AfaI GTAC 8 cut(s) 531, 636, 678, 993, 1400, 1617, 1796, 3188
AfiI CCNNNNNNNGG 9 cut(s) 437, 698, 1468, 1558, 1706, 1766, 1799, 2380, 2969
AflIII ACRYGT 1 cut(s) 2656
AhdI GACNNNNNGTC 2 cut(s) 2551, 3240
AjiI CACGTC 1 cut(s) 1720
AjnI CCWGG 3 cut(s) 406, 1738, 2379
AjuI GAANNNNNNNTTGG 4 cut(s) 1689, 1721, 2184, 2216
AloI GAACNNNNNNTCC 2 cut(s) 1827, 1859
Alw21I GWGCWC 3 cut(s) 671, 1872, 3089
Alw26I GTCTC 7 cut(s) 111, 216, 766, 1225, 2538, 2793, 3205
AlwI GGATC 5 cut(s) 35, 79, 709, 1426, 3321
Ama87I CYCGRG 7 cut(s) 664, 1509, 2521, 2753, 2885, 3223, 3238
AoxI GGCC 5 cut(s) 276, 1439, 1572, 2490, 2828
ApeKI GCWGC 8 cut(s) 56, 236, 776, 839, 1907, 1910, 2406, 2858
ApoI RAATTY 6 cut(s) 7, 923, 1316, 1502, 1631, 2341
Asp700I GAANNNNTTC 1 cut(s) 544
AspLEI GCGC 3 cut(s) 1474, 1523, 1860
AspS9I GGNCC 6 cut(s) 1287, 1328, 1790, 2491, 2882, 3227
AsuC2I CCSGG 5 cut(s) 458, 834, 1247, 1416, 2799
AsuII TTCGAA 1 cut(s) 1985
AvaI CYCGRG 7 cut(s) 664, 1509, 2521, 2753, 2885, 3223, 3238
AvaII GGWCC 5 cut(s) 1287, 1328, 1790, 2882, 3227
AxyI CCTNAGG 2 cut(s) 23, 67
BalI TGGCCA 1 cut(s) 1441
BanI GGYRCC 1 cut(s) 2683
BanII GRGCYC 4 cut(s) 671, 1872, 2528, 3089
BauI CACGAG 1 cut(s) 2336
BbsI GAAGAC 3 cut(s) 868, 2312, 2523
Bbv12I GWGCWC 3 cut(s) 671, 1872, 3089
BbvCI CCTCAGC 1 cut(s) 913
BbvI GCAGC 8 cut(s) 43, 248, 763, 826, 1897, 1919, 2418, 2870
BccI CCATC 7 cut(s) 502, 961, 1008, 1021, 1047, 2041, 3106
BciT130I CCWGG 3 cut(s) 408, 1740, 2381
BciVI GTATCC 2 cut(s) 1706, 3132
BcnI CCSGG 5 cut(s) 458, 834, 1247, 1416, 2799
BcoDI GTCTC 7 cut(s) 111, 216, 766, 1225, 2538, 2793, 3205
BfaI CTAG 4 cut(s) 537, 984, 1253, 1325
BfoI RGCGCY 2 cut(s) 1475, 1524
BfuI GTATCC 2 cut(s) 1706, 3132
BglII AGATCT 2 cut(s) 2048, 2889
BlpI GCTNAGC 1 cut(s) 3103
Bme1390I CCNGG 8 cut(s) 408, 458, 834, 1247, 1416, 1740, 2381, 2799
Bme18I GGWCC 5 cut(s) 1287, 1328, 1790, 2882, 3227
BmeRI GACNNNNNGTC 2 cut(s) 2551, 3240
BmeT110I CYCGRG 7 cut(s) 664, 1509, 2521, 2753, 2885, 3223, 3238
BmgBI CACGTC 1 cut(s) 1720
BmgT120I GGNCC 6 cut(s) 1287, 1328, 1790, 2491, 2882, 3227
BmiI GGNNCC 6 cut(s) 426, 1395, 2685, 2884, 3228, 3229
BmrFI CCNGG 8 cut(s) 408, 458, 834, 1247, 1416, 1740, 2381, 2799
BmrI ACTGGG 1 cut(s) 728
BmsI GCATC 7 cut(s) 403, 605, 1111, 1248, 2450, 2452, 2716
BmuI ACTGGG 1 cut(s) 728
BpiI GAAGAC 3 cut(s) 868, 2312, 2523
BpmI CTGGAG 5 cut(s) 294, 300, 435, 1200, 1693
Bpu10I CCTNAGC 2 cut(s) 913, 1463
Bpu1102I GCTNAGC 1 cut(s) 3103
Bpu14I TTCGAA 1 cut(s) 1985
BpuEI CTTGAG 2 cut(s) 3060, 3313
BpuMI CCSGG 5 cut(s) 458, 834, 1247, 1416, 2799
Bsa29I ATCGAT 1 cut(s) 1608
BsaAI YACGTR 1 cut(s) 1729
BsaHI GRCGYC 1 cut(s) 1978
BsaJI CCNNGG 7 cut(s) 456, 1245, 1847, 2379, 2425, 2494, 3237
BsaWI WCCGGW 4 cut(s) 358, 2686, 3284, 3329
BsaXI ACNNNNNCTCC 8 cut(s) 673, 703, 1135, 1165, 1827, 1857, 2964, 2994
Bsc4I CCNNNNNNNGG 9 cut(s) 437, 698, 1468, 1558, 1706, 1766, 1799, 2380, 2969
Bse118I RCCGGY 3 cut(s) 274, 278, 844
Bse1I ACTGG 6 cut(s) 632, 734, 785, 1217, 2062, 2777
Bse21I CCTNAGG 2 cut(s) 23, 67
Bse3DI GCAATG 6 cut(s) 532, 621, 1656, 2100, 2703, 3125
BseBI CCWGG 3 cut(s) 408, 1740, 2381
BseCI ATCGAT 1 cut(s) 1608
BseDI CCNNGG 7 cut(s) 456, 1245, 1847, 2379, 2425, 2494, 3237
BseGI GGATG 5 cut(s) 637, 793, 1000, 2467, 3117
BseLI CCNNNNNNNGG 9 cut(s) 437, 698, 1468, 1558, 1706, 1766, 1799, 2380, 2969
BseMI GCAATG 6 cut(s) 532, 621, 1656, 2100, 2703, 3125
BseMII CTCAG 8 cut(s) 81, 450, 927, 1297, 1578, 3072, 3117, 3138
BseNI ACTGG 6 cut(s) 632, 734, 785, 1217, 2062, 2777
BseX3I CGGCCG 1 cut(s) 276
BseXI GCAGC 8 cut(s) 43, 248, 763, 826, 1897, 1919, 2418, 2870
BseYI CCCAGC 1 cut(s) 803
BsgI GTGCAG 2 cut(s) 825, 2865
Bsh1236I CGCG 5 cut(s) 1571, 1858, 2530, 2658, 2918
Bsh1285I CGRYCG 2 cut(s) 279, 3285
BshFI GGCC 5 cut(s) 278, 1441, 1574, 2492, 2830
BshNI GGYRCC 1 cut(s) 2683
BshVI ATCGAT 1 cut(s) 1608
BsiEI CGRYCG 2 cut(s) 279, 3285
BsiHKAI GWGCWC 3 cut(s) 671, 1872, 3089
BsiHKCI CYCGRG 7 cut(s) 664, 1509, 2521, 2753, 2885, 3223, 3238
BslFI GGGAC 1 cut(s) 3213
BslI CCNNNNNNNGG 9 cut(s) 437, 698, 1468, 1558, 1706, 1766, 1799, 2380, 2969
BsmAI GTCTC 7 cut(s) 111, 216, 766, 1225, 2538, 2793, 3205
BsmBI CGTCTC 2 cut(s) 111, 216
BsmFI GGGAC 1 cut(s) 3213
BsnI GGCC 5 cut(s) 278, 1441, 1574, 2492, 2830
BsoBI CYCGRG 7 cut(s) 664, 1509, 2521, 2753, 2885, 3223, 3238
Bsp119I TTCGAA 1 cut(s) 1985
Bsp1286I GDGCHC 4 cut(s) 671, 1872, 2528, 3089
Bsp1407I TGTACA 2 cut(s) 991, 3186
Bsp1720I GCTNAGC 1 cut(s) 3103
BspANI GGCC 5 cut(s) 278, 1441, 1574, 2492, 2830
BspCNI CTCAG 8 cut(s) 80, 449, 926, 1296, 1579, 3073, 3116, 3139
BspDI ATCGAT 1 cut(s) 1608
BspFNI CGCG 5 cut(s) 1571, 1858, 2530, 2658, 2918
BspHI TCATGA 1 cut(s) 1533
BspLI GGNNCC 6 cut(s) 426, 1395, 2685, 2884, 3228, 3229
BspPI GGATC 5 cut(s) 35, 79, 709, 1426, 3321
BspT104I TTCGAA 1 cut(s) 1985
BspT107I GGYRCC 1 cut(s) 2683
BsrBI CCGCTC 1 cut(s) 1831
BsrDI GCAATG 6 cut(s) 532, 621, 1656, 2100, 2703, 3125
BsrFI RCCGGY 3 cut(s) 274, 278, 844
BsrGI TGTACA 2 cut(s) 991, 3186
BsrI ACTGG 6 cut(s) 632, 734, 785, 1217, 2062, 2777
BssAI RCCGGY 3 cut(s) 274, 278, 844
BssECI CCNNGG 7 cut(s) 456, 1245, 1847, 2379, 2425, 2494, 3237
BssNI GRCGYC 1 cut(s) 1978
BssSI CACGAG 1 cut(s) 2336
BssT1I CCWWGG 1 cut(s) 1847
Bst2BI CACGAG 1 cut(s) 2336
Bst2UI CCWGG 3 cut(s) 408, 1740, 2381
Bst6I CTCTTC 6 cut(s) 219, 436, 1297, 1341, 2255, 2714
BstACI GRCGYC 1 cut(s) 1978
BstAUI TGTACA 2 cut(s) 991, 3186
BstBAI YACGTR 1 cut(s) 1729
BstBI TTCGAA 1 cut(s) 1985
BstC8I GCNNGC 5 cut(s) 1576, 2005, 2528, 2856, 2985
BstDSI CCRYGG 2 cut(s) 2425, 2494
BstENI CCTNNNNNAGG 1 cut(s) 435
BstF5I GGATG 5 cut(s) 637, 793, 1000, 2467, 3117
BstFNI CGCG 5 cut(s) 1571, 1858, 2530, 2658, 2918
BstH2I RGCGCY 2 cut(s) 1475, 1524
BstHHI GCGC 3 cut(s) 1474, 1523, 1860
BstMAI GTCTC 7 cut(s) 111, 216, 766, 1225, 2538, 2793, 3205
BstMCI CGRYCG 2 cut(s) 279, 3285
BstNI CCWGG 3 cut(s) 408, 1740, 2381
BstSCI CCNGG 8 cut(s) 406, 456, 832, 1245, 1414, 1738, 2379, 2797
BstUI CGCG 5 cut(s) 1571, 1858, 2530, 2658, 2918
BstV1I GCAGC 8 cut(s) 43, 248, 763, 826, 1897, 1919, 2418, 2870
BstV2I GAAGAC 3 cut(s) 868, 2312, 2523
BstX2I RGATCY 5 cut(s) 27, 701, 1418, 2048, 2889
BstYI RGATCY 5 cut(s) 27, 701, 1418, 2048, 2889
BstZI CGGCCG 1 cut(s) 276
Bsu15I ATCGAT 1 cut(s) 1608
Bsu36I CCTNAGG 2 cut(s) 23, 67
BsuI GTATCC 2 cut(s) 1706, 3132
BsuRI GGCC 5 cut(s) 278, 1441, 1574, 2492, 2830
BsuTUI ATCGAT 1 cut(s) 1608
BtgI CCRYGG 2 cut(s) 2425, 2494
BtrI CACGTC 1 cut(s) 1720
BtsCI GGATG 5 cut(s) 637, 793, 1000, 2467, 3117
BtsI GCAGTG 2 cut(s) 1091, 2012
BtsIMutI CAGTG 4 cut(s) 504, 1091, 2012, 2784
Cac8I GCNNGC 5 cut(s) 1576, 2005, 2528, 2856, 2985
CciI TCATGA 1 cut(s) 1533
CfoI GCGC 3 cut(s) 1474, 1523, 1860
Cfr10I RCCGGY 3 cut(s) 274, 278, 844
Cfr13I GGNCC 6 cut(s) 1287, 1328, 1790, 2491, 2882, 3227
ClaI ATCGAT 1 cut(s) 1608
Csp6I GTAC 8 cut(s) 530, 635, 677, 992, 1399, 1616, 1795, 3187
CviQI GTAC 8 cut(s) 530, 635, 677, 992, 1399, 1616, 1795, 3187
DriI GACNNNNNGTC 2 cut(s) 2551, 3240
EaeI YGGCCR 3 cut(s) 276, 1439, 1572
EagI CGGCCG 1 cut(s) 276
Eam1104I CTCTTC 6 cut(s) 219, 436, 1297, 1341, 2255, 2714
Eam1105I GACNNNNNGTC 2 cut(s) 2551, 3240
EarI CTCTTC 6 cut(s) 219, 436, 1297, 1341, 2255, 2714
EciI GGCGGA 6 cut(s) 501, 708, 786, 1725, 2211, 2785
Ecl136II GAGCTC 3 cut(s) 669, 1870, 3087
EclXI CGGCCG 1 cut(s) 276
Eco130I CCWWGG 1 cut(s) 1847
Eco24I GRGCYC 4 cut(s) 671, 1872, 2528, 3089
Eco47I GGWCC 5 cut(s) 1287, 1328, 1790, 2882, 3227
Eco52I CGGCCG 1 cut(s) 276
Eco53kI GAGCTC 3 cut(s) 669, 1870, 3087
Eco81I CCTNAGG 2 cut(s) 23, 67
Eco88I CYCGRG 7 cut(s) 664, 1509, 2521, 2753, 2885, 3223, 3238
EcoICRI GAGCTC 3 cut(s) 669, 1870, 3087
EcoNI CCTNNNNNAGG 1 cut(s) 435
EcoO109I RGGNCCY 3 cut(s) 1287, 2882, 3227
EcoRII CCWGG 3 cut(s) 406, 1738, 2379
EcoT14I CCWWGG 1 cut(s) 1847
EcoT38I GRGCYC 4 cut(s) 671, 1872, 2528, 3089
ErhI CCWWGG 1 cut(s) 1847
Esp3I CGTCTC 2 cut(s) 111, 216
FaqI GGGAC 1 cut(s) 3213
FauI CCCGC 3 cut(s) 1756, 1764, 2535
FokI GGATG 5 cut(s) 624, 780, 987, 2474, 3124
FriOI GRGCYC 4 cut(s) 671, 1872, 2528, 3089
FspBI CTAG 4 cut(s) 537, 984, 1253, 1325
GlaI GCGC 3 cut(s) 1473, 1522, 1859
GsaI CCCAGC 1 cut(s) 807
GsuI CTGGAG 5 cut(s) 294, 300, 435, 1200, 1693
HaeII RGCGCY 2 cut(s) 1475, 1524
HaeIII GGCC 5 cut(s) 278, 1441, 1574, 2492, 2830
HhaI GCGC 3 cut(s) 1474, 1523, 1860
Hin1I GRCGYC 1 cut(s) 1978
Hin6I GCGC 3 cut(s) 1472, 1521, 1858
HinP1I GCGC 3 cut(s) 1472, 1521, 1858
HincII GTYRAC 1 cut(s) 657
HindII GTYRAC 1 cut(s) 657
HindIII AAGCTT 4 cut(s) 195, 888, 2985, 3289
HpaI GTTAAC 1 cut(s) 657
Hpy166II GTNNAC 8 cut(s) 657, 994, 1331, 1401, 1745, 2112, 2212, 3189
Hpy8I GTNNAC 8 cut(s) 657, 994, 1331, 1401, 1745, 2112, 2212, 3189
Hpy99I CGWCG 5 cut(s) 46, 263, 1721, 1977, 1980
HpyCH4IV ACGT 4 cut(s) 1719, 1728, 1978, 2669
HpySE526I ACGT 4 cut(s) 1719, 1728, 1978, 2669
Hsp92I GRCGYC 1 cut(s) 1978
HspAI GCGC 3 cut(s) 1472, 1521, 1858
KflI GGGWCCC 1 cut(s) 3227
KspAI GTTAAC 1 cut(s) 657
Lsp1109I GCAGC 8 cut(s) 43, 248, 763, 826, 1897, 1919, 2418, 2870
LweI GCATC 7 cut(s) 403, 605, 1111, 1248, 2450, 2452, 2716
MaeI CTAG 4 cut(s) 537, 984, 1253, 1325
MaeII ACGT 4 cut(s) 1719, 1728, 1978, 2669
MaeIII GTNAC 6 cut(s) 445, 2369, 2615, 2735, 3095, 3321
MbiI CCGCTC 1 cut(s) 1831
MfeI CAATTG 1 cut(s) 615
MflI RGATCY 5 cut(s) 27, 701, 1418, 2048, 2889
MhlI GDGCHC 4 cut(s) 671, 1872, 2528, 3089
MlsI TGGCCA 1 cut(s) 1441
MluI ACGCGT 1 cut(s) 2656
MluNI TGGCCA 1 cut(s) 1441
MlyI GAGTC 6 cut(s) 7, 682, 1138, 2513, 2818, 3137
MmeI TCCRAC 4 cut(s) 198, 241, 716, 1289
Mox20I TGGCCA 1 cut(s) 1441
MroXI GAANNNNTTC 1 cut(s) 544
MscI TGGCCA 1 cut(s) 1441
MseI TTAA 7 cut(s) 333, 656, 927, 2054, 2250, 2345, 3038
Msp20I TGGCCA 1 cut(s) 1441
MspA1I CMGCKG 1 cut(s) 1910
MspR9I CCNGG 8 cut(s) 408, 458, 834, 1247, 1416, 1740, 2381, 2799
MunI CAATTG 1 cut(s) 615
MvaI CCWGG 3 cut(s) 408, 1740, 2381
MvnI CGCG 5 cut(s) 1571, 1858, 2530, 2658, 2918
NciI CCSGG 5 cut(s) 458, 834, 1247, 1416, 2799
NlaIV GGNNCC 6 cut(s) 426, 1395, 2685, 2884, 3228, 3229
NmeAIII GCCGAG 2 cut(s) 2021, 2806
NmuCI GTSAC 1 cut(s) 3095
NspV TTCGAA 1 cut(s) 1985
PaeR7I CTCGAG 3 cut(s) 664, 2521, 2753
PagI TCATGA 1 cut(s) 1533
PcsI WCGNNNNNNNCGW 2 cut(s) 1575, 1725
PdmI GAANNNNTTC 1 cut(s) 544
PflFI GACNNNGTC 1 cut(s) 1977
PflMI CCANNNNNTGG 2 cut(s) 1706, 1766
PfoI TCCNGGA 2 cut(s) 406, 1414
PleI GAGTC 6 cut(s) 7, 682, 1138, 2513, 2818, 3137
PpsI GAGTC 6 cut(s) 7, 682, 1138, 2513, 2818, 3137
Ppu21I YACGTR 1 cut(s) 1729
PpuMI RGGWCCY 3 cut(s) 1287, 2882, 3227
Psp124BI GAGCTC 3 cut(s) 671, 1872, 3089
Psp1406I AACGTT 1 cut(s) 2669
Psp5II RGGWCCY 3 cut(s) 1287, 2882, 3227
Psp6I CCWGG 3 cut(s) 406, 1738, 2379
PspFI CCCAGC 1 cut(s) 803
PspGI CCWGG 3 cut(s) 406, 1738, 2379
PspN4I GGNNCC 6 cut(s) 426, 1395, 2685, 2884, 3228, 3229
PspPI GGNCC 6 cut(s) 1287, 1328, 1790, 2491, 2882, 3227
PspPPI RGGWCCY 3 cut(s) 1287, 2882, 3227
PspXI VCTCGAGB 2 cut(s) 664, 2521
PsuI RGATCY 5 cut(s) 27, 701, 1418, 2048, 2889
PsyI GACNNNGTC 1 cut(s) 1977
PvuII CAGCTG 1 cut(s) 1910
RsaI GTAC 8 cut(s) 531, 636, 678, 993, 1400, 1617, 1796, 3188
RsaNI GTAC 8 cut(s) 530, 635, 677, 992, 1399, 1616, 1795, 3187
SacI GAGCTC 3 cut(s) 671, 1872, 3089
SaqAI TTAA 7 cut(s) 333, 656, 927, 2054, 2250, 2345, 3038
Sau96I GGNCC 6 cut(s) 1287, 1328, 1790, 2491, 2882, 3227
SchI GAGTC 6 cut(s) 7, 682, 1138, 2513, 2818, 3137
ScrFI CCNGG 8 cut(s) 408, 458, 834, 1247, 1416, 1740, 2381, 2799
SduI GDGCHC 4 cut(s) 671, 1872, 2528, 3089
SfaNI GCATC 7 cut(s) 403, 605, 1111, 1248, 2450, 2452, 2716
Sfr274I CTCGAG 3 cut(s) 664, 2521, 2753
SfuI TTCGAA 1 cut(s) 1985
SinI GGWCC 5 cut(s) 1287, 1328, 1790, 2882, 3227
SlaI CTCGAG 3 cut(s) 664, 2521, 2753
SmlI CTYRAG 5 cut(s) 664, 2521, 2753, 3075, 3292
SmoI CTYRAG 5 cut(s) 664, 2521, 2753, 3075, 3292
SspMI CTAG 4 cut(s) 537, 984, 1253, 1325
SstI GAGCTC 3 cut(s) 671, 1872, 3089
StyD4I CCNGG 8 cut(s) 406, 456, 832, 1245, 1414, 1738, 2379, 2797
StyI CCWWGG 1 cut(s) 1847
TaiI ACGT 4 cut(s) 1722, 1731, 1981, 2672
TatI WGTACW 3 cut(s) 634, 991, 3186
TauI GCSGC 4 cut(s) 1574, 1858, 2492, 2921
Tru1I TTAA 7 cut(s) 333, 656, 927, 2054, 2250, 2345, 3038
Tru9I TTAA 7 cut(s) 333, 656, 927, 2054, 2250, 2345, 3038
TscAI CASTG 4 cut(s) 504, 1098, 2019, 2784
TseFI GTSAC 1 cut(s) 3095
TseI GCWGC 8 cut(s) 56, 236, 776, 839, 1907, 1910, 2406, 2858
Tsp45I GTSAC 1 cut(s) 3095
TspGWI ACGGA 8 cut(s) 78, 247, 828, 1541, 1827, 2097, 2247, 2754
TspRI CASTG 4 cut(s) 504, 1098, 2019, 2784
Tth111I GACNNNGTC 1 cut(s) 1977
Van91I CCANNNNNTGG 2 cut(s) 1706, 1766
VpaK11BI GGWCC 5 cut(s) 1287, 1328, 1790, 2882, 3227
XagI CCTNNNNNAGG 1 cut(s) 435
XapI RAATTY 6 cut(s) 7, 923, 1316, 1502, 1631, 2341
XhoI CTCGAG 3 cut(s) 664, 2521, 2753
XmnI GAANNNNTTC 1 cut(s) 544
XspI CTAG 4 cut(s) 537, 984, 1253, 1325
ZraI GACGTC 1 cut(s) 1979
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.