Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001069

Physical Location & Seq

Genomic Coordinates Forward (+)

23979598 .. 23984846

Gene Structure 5249 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00102000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGCTCCTGAACATTCCCCCTCAAGCTCACGTCACCATCATCATGCAAACAAAAAAGTTCCACAGCTCTGCTCCAGAACCAACTTACTCGATTCCTTCCCACACTAACAGTCAACAAGGCCCTTCAGTCTCCCCATTTCGATCTCTTTCGCCTTCTTCAAGGAGTTGGACTGCACCTGCACCATCACCAACTACTTTTGAAGGCCACTATAACATGCCCATCTTTCCACCTGCAATTTCTCCCATAGATTCTTCCTTGAAGAGGACAAAGTCCCCACCACCATCACCAATTTTGGCACTACCACCTCCACCTCCCAATGAAGATTGTTCGTCAATCACATGCACGGATCCATTAACATATACTCCTCCAGGATCAACATGTGGTTGTGTGCAGCCAATTGAAGTTAAACTCCAACTAGATGTTGCAATATACACATTCTTCCCTTCAGTTTCAAAGCTGGCTGAGGAAATCGCAGACAGTGTTGCACTAAACCATAGCCAAGTTCGCATAATGGGAGCAGATGCATCTAGTCAGCAGCTAGAAAAAACTGCCGTCCTCGTTAACTTGGTACCTATAGGACTAACATTTGATGGCACTACTGCATTTCAAATCTATGACAAATTCTGGCGCAGACAGGTTTCCATAAATGCTTCTCTCTTTGGTGATTATGAAGTATTGAATGTTCACTATCCAGGTCTTCCACCTTCTCCCCCTTCAGCACCTTCAGCCATTTCTACTATAGATGACGGGCCATACATGGGCCAAGACAACAATGGAAGGGTAATAAAACCTATACCAGTTAATGTGCCAAGAAAAAGAAATGATGGAATCAAAGGAAGGGATCCCAGGTCAGTGATGTTTGGAAGCACACATGGTTCCAGATCAATGTCTTTTAGTTCTGGCACACTAACCTATACTGGATCTGCGAAGACCTTTACTCTGCATGACATGGAGAGAGCCACTAATAATTTTGATGCTTCAAGAATACTTGGAGAAGGTGGCTTTGGGCTTGTTTACAGTGCTACTTTAGATGATGGACGAGAGGTGGCTGTGAAGGTTCTGAAGAGAGATGATCATCATGGTGGCCGCGAATTCTTAGCAGAAGTTGAGATGCTTGGCCGTCTTCACCACAGAAATTTGGTCAAATTAATTGGTATCTGCACAGAGGGCCATACTCGTTGCCTCGTTTACGAACTTGTTCCAAATGGAAGTGTTGAATCCCATTTACATGGTGTTGACAAGGAAACTGATCCACTTGATTGGGATGCCAGAATAAAGATTGCCCTTGGTGCAGCTCGGGGCTTAGCTTATCTCCACGAAGACTCAAATCCTCGAGTTATACATCGTGACTTCAAGGCCAGCAACATCTTACTGGAATATGATTTTACACCCAAGGTTTCGGATTTTGGACTGGCTAGAGCGGCGCTGGAGGAGGGAAAAAGACATATTTCAACACATGTTATGGGAACTTTTGGTTACTTGGCTCCAGAGTATGCAATGACTGGTCATCTTCTAGTAAAAAGTGATGTTTACAGCTATGGTGTAGTCCTTCTTGAACTCCTGACAGGAAGAAAGCCGGTGGATCTGTCACAACCTTCAGGTCAAGAGAACCTCGTTGCTTGGGCTCGTCCTCTCCTCACCAGCAGAGAGGGTCTAGAATCAATAATAGACCCGGCGTTGAAATCTGATATGATCACATGGGACAGTGTAACCAAGGTAGCAGCAATTGCTTCAATGTGTATACAACCAGAAGTATCTCACCGCCCGTTCATGGGTGAGGTTGTTCAGGCCTTAAAGCTTGTTCAACAAGTTGTGGCCAAAGACGATGATGATCTCTGCATTCATACAGATAGTGGTAATCTTGAAGTGGCAGAATCACAGCTTCAGATGCCTGTATTCGGGGCTAGCCATGACACTAAGATACCCTCAACATCAGATTTGTTGAGTGCAAGTGTGGGATTTGAGGTTGAGGGGCAGGAAGTTGGATCTTTTAGGAGGTACTCTAGTTCAGGGCCTTTGAGGACTGGTAGGAGAAGGCAATTTTGGCAAAGACTAAGGAGTTTGTCTAGAGGAAGTATGAGTGAACATGGATCTTCATTGAAATTGTGGCCAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009987 GO:0010065 GO:0010068 GO:0010154 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0036211 GO:0038023 GO:0042335 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0048316 GO:0048507 GO:0048508 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

705

Amino Acids

77.1

Weight (kDa)

6.32

Isoelectric Point (pI)

50.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALE2_N	PF23180	115 - 234	2.4e-55	Receptor-like PK ALE2 N-terminal domain
Pkinase	PF00069	326 - 595	5.9e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	327 - 597	1.7e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56890
fragaria_vesca	FvH4_1g07530 FvH4_1g07530 FvH4_1g07530 FvH4_1g07530 FvH4_1g07530 FvH4_1g07530 FvH4_1g07530 FvH4_1g07530 FvH4_1g07530 FvH4_1g07530 FvH4_1g07530 FvH4_1g07530 FvH4_1g07530 FvH4_6g33370 FvH4_6g33370 FvH4_6g33370 FvH4_6g33370 FvH4_6g33370 FvH4_6g33370 FvH4_6g33370 FvH4_6g33370 FvH4_6g33370 FvH4_6g33370 FvH4_6g33370
malus_domestica	MD02G1079800.v1.1 MD09G1193100.v1.1 MD15G1207500.v1.1
prunus_persica	Prupe.3G049500_v2.0.a1 Prupe.7G209300_v2.0.a1 Prupe.7G209300_v2.0.a1
pyrus_communis	pycom02g06360 pycom09g10970 pycom15g18390
rosa_chinensis	RchiOBHm_Chr2g0093411 RchiOBHm_Chr2g0143231
rosa_laevigata	RLG00000016396 RLG00000020017 RLG00000020021
rosa_multiflora	Rmu_co8519777.1_g000001 Rmu_sc0003950.1_g000003
rosa_roxburghii	Rroxscaffold_2G00102000 Rroxscaffold_2G00148130
rosa_rugosa	Rorug02G0035200 Rorug02G0035200 Rorug02G0035300 Rorug02G0035400 Rorug02G0035500 Rorug02G0035600 Rorug02G0379700
rosa_samantha	Rh2AG081600 Rh2AG432500 Rh2BG082900 Rh2BG441100 Rh2CG084900 Rh2CG418300 Rh2DG080600 Rh2DG451200
rosa_wichuraiana	Rw2G006500 Rw2G035310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	184, 238
Acc36I	ACCTGC	2 cut(s)	184, 238
Acc65I	GGTACC	1 cut(s)	568
AccB1I	GGYRCC	1 cut(s)	568
AccBSI	CCGCTC	1 cut(s)	1421
AccI	GTMKAC	1 cut(s)	1741
AccII	CGCG	1 cut(s)	1089
AciI	CCGC	3 cut(s)	1087, 1421, 1762
AcoI	YGGCCR	4 cut(s)	1084, 1117, 1815, 2108
AcsI	RAATTY	3 cut(s)	620, 1091, 1135
AcuI	CTGAAG	7 cut(s)	108, 429, 699, 708, 1082, 1581, 1868
AfaI	GTAC	2 cut(s)	570, 2000
AfiI	CCNNNNNNNGG	5 cut(s)	261, 758, 1771, 1772, 1898
AflIII	ACRYGT	2 cut(s)	377, 1456
AjiI	CACGTC	1 cut(s)	31
AjnI	CCWGG	3 cut(s)	367, 691, 845
AjuI	GAANNNNNNNTTGG	4 cut(s)	987, 1019, 2026, 2058
AluBI	AGCT	9 cut(s)	26, 66, 457, 538, 1295, 1307, 1536, 1798, 1882
AluI	AGCT	9 cut(s)	26, 66, 457, 538, 1295, 1307, 1536, 1798, 1882
Alw26I	GTCTC	1 cut(s)	133
Ama87I	CYCGRG	2 cut(s)	1296, 1332
ApeKI	GCWGC	4 cut(s)	391, 535, 1292, 1721
ApoI	RAATTY	3 cut(s)	620, 1091, 1135
AseI	ATTAAT	1 cut(s)	1148
Asp700I	GAANNNNTTC	1 cut(s)	1197
Asp718I	GGTACC	1 cut(s)	568
AspLEI	GCGC	2 cut(s)	630, 1426
AspS9I	GGNCC	5 cut(s)	119, 749, 760, 1168, 2012
AsuC2I	CCSGG	1 cut(s)	1673
AsuHPI	GGTGA	8 cut(s)	25, 177, 276, 674, 1118, 1630, 1751, 1787
AsuNHI	GCTAGC	1 cut(s)	1904
AvaI	CYCGRG	2 cut(s)	1296, 1332
BaeI	ACNNNNGTAYC	2 cut(s)	1990, 2023
BalI	TGGCCA	2 cut(s)	1817, 2110
BamHI	GGATCC	2 cut(s)	346, 841
BanI	GGYRCC	1 cut(s)	568
BanII	GRGCYC	1 cut(s)	1627
BbsI	GAAGAC	4 cut(s)	689, 935, 1115, 1326
BbvCI	CCTCAGC	1 cut(s)	462
BbvI	GCAGC	4 cut(s)	403, 547, 1304, 1733
BccI	CCATC	7 cut(s)	44, 190, 227, 289, 584, 818, 1028
BceAI	ACGGC	2 cut(s)	536, 1104
BciT130I	CCWGG	3 cut(s)	369, 693, 847
BclI	TGATCA	2 cut(s)	1072, 1692
BcnI	CCSGG	1 cut(s)	1673
BcoDI	GTCTC	1 cut(s)	133
BfaI	CTAG	9 cut(s)	416, 528, 539, 1416, 1514, 1655, 1905, 2004, 2067
BfmI	CTRYAG	2 cut(s)	573, 738
BfoI	RGCGCY	1 cut(s)	1427
BfuAI	ACCTGC	2 cut(s)	184, 238
BisI	GCNGC	6 cut(s)	392, 536, 1087, 1293, 1422, 1722
BlpI	GCTNAGC	1 cut(s)	1303
BlsI	GCNGC	6 cut(s)	393, 537, 1088, 1294, 1423, 1723
Bme1390I	CCNGG	4 cut(s)	369, 693, 847, 1673
BmeT110I	CYCGRG	2 cut(s)	1296, 1332
BmgBI	CACGTC	1 cut(s)	31
BmgT120I	GGNCC	5 cut(s)	119, 749, 760, 1168, 2012
BmiI	GGNNCC	5 cut(s)	348, 570, 843, 877, 1485
BmrFI	CCNGG	4 cut(s)	369, 693, 847, 1673
BmsI	GCATC	6 cut(s)	511, 533, 964, 1101, 1255, 1878
BmtI	GCTAGC	1 cut(s)	1908
BpiI	GAAGAC	4 cut(s)	689, 935, 1115, 1326
BpmI	CTGGAG	4 cut(s)	57, 351, 1448, 1470
Bpu10I	CCTNAGC	1 cut(s)	462
Bpu1102I	GCTNAGC	1 cut(s)	1303
BpuEI	CTTGAG	1 cut(s)	6
BpuMI	CCSGG	1 cut(s)	1673
BsaBI	GATNNNNATC	2 cut(s)	1074, 1830
BsaJI	CCNNGG	4 cut(s)	845, 1285, 1392, 1713
BsaXI	ACNNNNNCTCC	2 cut(s)	346, 376
Bsc4I	CCNNNNNNNGG	5 cut(s)	261, 758, 1771, 1772, 1898
Bse118I	RCCGGY	1 cut(s)	1576
Bse1I	ACTGG	6 cut(s)	797, 922, 1377, 1416, 1507, 2029
Bse3DI	GCAATG	1 cut(s)	1503
Bse8I	GATNNNNATC	2 cut(s)	1074, 1830
BseBI	CCWGG	3 cut(s)	369, 693, 847
BseDI	CCNNGG	4 cut(s)	845, 1285, 1392, 1713
BseGI	GGATG	1 cut(s)	1270
BseJI	GATNNNNATC	2 cut(s)	1074, 1830
BseLI	CCNNNNNNNGG	5 cut(s)	261, 758, 1771, 1772, 1898
BseMI	GCAATG	1 cut(s)	1503
BseMII	CTCAG	1 cut(s)	453
BseNI	ACTGG	6 cut(s)	797, 922, 1377, 1416, 1507, 2029
BseRI	GAGGAG	3 cut(s)	354, 1445, 1625
BseXI	GCAGC	4 cut(s)	403, 547, 1304, 1733
BsgI	GTGCAG	5 cut(s)	156, 162, 410, 1144, 1311
Bsh1236I	CGCG	1 cut(s)	1089
BshNI	GGYRCC	1 cut(s)	568
BsiHKCI	CYCGRG	2 cut(s)	1296, 1332
BsiSI	CCGG	2 cut(s)	1577, 1673
BslFI	GGGAC	2 cut(s)	256, 1715
BslI	CCNNNNNNNGG	5 cut(s)	261, 758, 1771, 1772, 1898
BsmAI	GTCTC	1 cut(s)	133
BsmFI	GGGAC	2 cut(s)	256, 1715
BsmI	GAATGC	1 cut(s)	1839
BsoBI	CYCGRG	2 cut(s)	1296, 1332
Bsp1286I	GDGCHC	1 cut(s)	1627
Bsp1720I	GCTNAGC	1 cut(s)	1303
BspACI	CCGC	3 cut(s)	1087, 1421, 1762
BspCNI	CTCAG	1 cut(s)	454
BspFNI	CGCG	1 cut(s)	1089
BspLI	GGNNCC	5 cut(s)	348, 570, 843, 877, 1485
BspMI	ACCTGC	2 cut(s)	184, 238
BspOI	GCTAGC	1 cut(s)	1908
BspT107I	GGYRCC	1 cut(s)	568
BsrBI	CCGCTC	1 cut(s)	1421
BsrDI	GCAATG	1 cut(s)	1503
BsrFI	RCCGGY	1 cut(s)	1576
BsrI	ACTGG	6 cut(s)	797, 922, 1377, 1416, 1507, 2029
BssAI	RCCGGY	1 cut(s)	1576
BssECI	CCNNGG	4 cut(s)	845, 1285, 1392, 1713
BssNAI	GTATAC	1 cut(s)	1742
BssT1I	CCWWGG	3 cut(s)	1285, 1392, 1713
Bst1107I	GTATAC	1 cut(s)	1742
Bst2UI	CCWGG	3 cut(s)	369, 693, 847
Bst4CI	ACNGT	4 cut(s)	110, 479, 1019, 1706
Bst6I	CTCTTC	2 cut(s)	254, 1058
BstAPI	GCANNNNNTGC	1 cut(s)	1727
BstC8I	GCNNGC	3 cut(s)	459, 1360, 1906
BstDEI	CTNAG	5 cut(s)	462, 1096, 1303, 1917, 2054
BstENI	CCTNNNNNAGG	1 cut(s)	259
BstF5I	GGATG	1 cut(s)	1270
BstFNI	CGCG	1 cut(s)	1089
BstH2I	RGCGCY	1 cut(s)	1427
BstHHI	GCGC	2 cut(s)	630, 1426
BstMAI	GTCTC	1 cut(s)	133
BstMWI	GCNNNNNNNGC	8 cut(s)	504, 725, 1167, 1289, 1421, 1727, 1888, 2044
BstNI	CCWGG	3 cut(s)	369, 693, 847
BstNSI	RCATGY	4 cut(s)	217, 342, 381, 1460
BstSCI	CCNGG	4 cut(s)	367, 691, 845, 1671
BstSFI	CTRYAG	2 cut(s)	573, 738
BstUI	CGCG	1 cut(s)	1089
BstV1I	GCAGC	4 cut(s)	403, 547, 1304, 1733
BstV2I	GAAGAC	4 cut(s)	689, 935, 1115, 1326
BstX2I	RGATCY	6 cut(s)	346, 841, 920, 1582, 1985, 2090
BstXI	CCANNNNNNTGG	2 cut(s)	1229, 1260
BstYI	RGATCY	6 cut(s)	346, 841, 920, 1582, 1985, 2090
BstZ17I	GTATAC	1 cut(s)	1742
BtrI	CACGTC	1 cut(s)	31
BtsCI	GGATG	1 cut(s)	1270
BtsIMutI	CAGTG	4 cut(s)	484, 858, 1024, 1711
BveI	ACCTGC	2 cut(s)	184, 238
Cac8I	GCNNGC	3 cut(s)	459, 1360, 1906
CfoI	GCGC	2 cut(s)	630, 1426
Cfr10I	RCCGGY	1 cut(s)	1576
Cfr13I	GGNCC	5 cut(s)	119, 749, 760, 1168, 2012
Csp6I	GTAC	2 cut(s)	569, 1999
CviQI	GTAC	2 cut(s)	569, 1999
DdeI	CTNAG	5 cut(s)	462, 1096, 1303, 1917, 2054
EaeI	YGGCCR	4 cut(s)	1084, 1117, 1815, 2108
Eam1104I	CTCTTC	2 cut(s)	254, 1058
EarI	CTCTTC	2 cut(s)	254, 1058
Eco130I	CCWWGG	3 cut(s)	1285, 1392, 1713
Eco147I	AGGCCT	1 cut(s)	1790
Eco24I	GRGCYC	1 cut(s)	1627
Eco57I	CTGAAG	7 cut(s)	108, 429, 699, 708, 1082, 1581, 1868
Eco88I	CYCGRG	2 cut(s)	1296, 1332
EcoNI	CCTNNNNNAGG	1 cut(s)	259
EcoO109I	RGGNCCY	2 cut(s)	119, 2012
EcoRI	GAATTC	1 cut(s)	1091
EcoRII	CCWGG	3 cut(s)	367, 691, 845
EcoT14I	CCWWGG	3 cut(s)	1285, 1392, 1713
EcoT22I	ATGCAT	1 cut(s)	526
EcoT38I	GRGCYC	1 cut(s)	1627
ErhI	CCWWGG	3 cut(s)	1285, 1392, 1713
FaqI	GGGAC	2 cut(s)	256, 1715
FbaI	TGATCA	2 cut(s)	1072, 1692
FblI	GTMKAC	1 cut(s)	1741
Fnu4HI	GCNGC	6 cut(s)	392, 536, 1087, 1293, 1422, 1722
FokI	GGATG	1 cut(s)	1277
FriOI	GRGCYC	1 cut(s)	1627
Fsp4HI	GCNGC	6 cut(s)	392, 536, 1087, 1293, 1422, 1722
FspBI	CTAG	9 cut(s)	416, 528, 539, 1416, 1514, 1655, 1905, 2004, 2067
GlaI	GCGC	2 cut(s)	629, 1425
GluI	GCNGC	6 cut(s)	392, 536, 1087, 1293, 1422, 1722
GsuI	CTGGAG	4 cut(s)	57, 351, 1448, 1470
HaeII	RGCGCY	1 cut(s)	1427
HapII	CCGG	2 cut(s)	1577, 1673
HhaI	GCGC	2 cut(s)	630, 1426
Hin6I	GCGC	2 cut(s)	628, 1424
HinP1I	GCGC	2 cut(s)	628, 1424
HincII	GTYRAC	3 cut(s)	113, 562, 1237
HindII	GTYRAC	3 cut(s)	113, 562, 1237
HindIII	AAGCTT	1 cut(s)	1796
HinfI	GANTC	7 cut(s)	91, 248, 828, 1217, 1322, 1658, 1874
HpaI	GTTAAC	1 cut(s)	562
HpaII	CCGG	2 cut(s)	1577, 1673
HphI	GGTGA	8 cut(s)	25, 177, 276, 674, 1118, 1630, 1751, 1787
Hpy166II	GTNNAC	9 cut(s)	113, 562, 685, 1015, 1189, 1237, 1531, 1742, 2084
Hpy188I	TCNGA	5 cut(s)	1062, 1402, 1687, 1887, 1936
Hpy8I	GTNNAC	9 cut(s)	113, 562, 685, 1015, 1189, 1237, 1531, 1742, 2084
HpyCH4III	ACNGT	4 cut(s)	110, 479, 1019, 1706
HpyCH4IV	ACGT	1 cut(s)	30
HpyF10VI	GCNNNNNNNGC	8 cut(s)	504, 725, 1167, 1289, 1421, 1727, 1888, 2044
HpyF3I	CTNAG	5 cut(s)	462, 1096, 1303, 1917, 2054
HpySE526I	ACGT	1 cut(s)	30
HspAI	GCGC	2 cut(s)	628, 1424
KpnI	GGTACC	1 cut(s)	572
Ksp22I	TGATCA	2 cut(s)	1072, 1692
KspAI	GTTAAC	1 cut(s)	562
LmnI	GCTCC	4 cut(s)	9, 76, 515, 1489
Lsp1109I	GCAGC	4 cut(s)	403, 547, 1304, 1733
LweI	GCATC	6 cut(s)	511, 533, 964, 1101, 1255, 1878
MaeI	CTAG	9 cut(s)	416, 528, 539, 1416, 1514, 1655, 1905, 2004, 2067
MaeII	ACGT	1 cut(s)	30
MaeIII	GTNAC	5 cut(s)	31, 1346, 1475, 1587, 1708
MbiI	CCGCTC	1 cut(s)	1421
MfeI	CAATTG	2 cut(s)	396, 1725
MflI	RGATCY	6 cut(s)	346, 841, 920, 1582, 1985, 2090
MhlI	GDGCHC	1 cut(s)	1627
MlsI	TGGCCA	2 cut(s)	1817, 2110
MluNI	TGGCCA	2 cut(s)	1817, 2110
MlyI	GAGTC	1 cut(s)	1316
MmeI	TCCRAC	3 cut(s)	146, 436, 1963
Mox20I	TGGCCA	2 cut(s)	1817, 2110
Mph1103I	ATGCAT	1 cut(s)	526
MroXI	GAANNNNTTC	1 cut(s)	1197
MscI	TGGCCA	2 cut(s)	1817, 2110
MseI	TTAA	6 cut(s)	353, 405, 561, 801, 1148, 1793
MslI	CAYNNNNRTG	3 cut(s)	41, 1080, 1227
Msp20I	TGGCCA	2 cut(s)	1817, 2110
MspI	CCGG	2 cut(s)	1577, 1673
MspR9I	CCNGG	4 cut(s)	369, 693, 847, 1673
MunI	CAATTG	2 cut(s)	396, 1725
Mva1269I	GAATGC	1 cut(s)	1839
MvaI	CCWGG	3 cut(s)	369, 693, 847
MvnI	CGCG	1 cut(s)	1089
MwoI	GCNNNNNNNGC	8 cut(s)	504, 725, 1167, 1289, 1421, 1727, 1888, 2044
NciI	CCSGG	1 cut(s)	1673
NheI	GCTAGC	1 cut(s)	1904
NlaIV	GGNNCC	5 cut(s)	348, 570, 843, 877, 1485
NmuCI	GTSAC	3 cut(s)	31, 1346, 1587
NsiI	ATGCAT	1 cut(s)	526
NspI	RCATGY	4 cut(s)	217, 342, 381, 1460
PaeR7I	CTCGAG	1 cut(s)	1332
PaqCI	CACCTGC	2 cut(s)	184, 238
PceI	AGGCCT	1 cut(s)	1790
PciI	ACATGT	2 cut(s)	377, 1456
PctI	GAATGC	1 cut(s)	1839
PdmI	GAANNNNTTC	1 cut(s)	1197
PfeI	GAWTC	6 cut(s)	91, 248, 828, 1217, 1658, 1874
PflFI	GACNNNGTC	1 cut(s)	268
PfoI	TCCNGGA	1 cut(s)	367
PkrI	GCNGC	6 cut(s)	393, 537, 1088, 1294, 1423, 1723
PleI	GAGTC	1 cut(s)	1316
PpsI	GAGTC	1 cut(s)	1316
PscI	ACATGT	2 cut(s)	377, 1456
PshBI	ATTAAT	1 cut(s)	1148
Psp6I	CCWGG	3 cut(s)	367, 691, 845
PspGI	CCWGG	3 cut(s)	367, 691, 845
PspN4I	GGNNCC	5 cut(s)	348, 570, 843, 877, 1485
PspPI	GGNCC	5 cut(s)	119, 749, 760, 1168, 2012
PspXI	VCTCGAGB	1 cut(s)	1332
PsrI	GAACNNNNNNTAC	2 cut(s)	666, 698
PsuI	RGATCY	6 cut(s)	346, 841, 920, 1582, 1985, 2090
PsyI	GACNNNGTC	1 cut(s)	268
RsaI	GTAC	2 cut(s)	570, 2000
RsaNI	GTAC	2 cut(s)	569, 1999
RseI	CAYNNNNRTG	3 cut(s)	41, 1080, 1227
SaqAI	TTAA	6 cut(s)	353, 405, 561, 801, 1148, 1793
SatI	GCNGC	6 cut(s)	392, 536, 1087, 1293, 1422, 1722
Sau96I	GGNCC	5 cut(s)	119, 749, 760, 1168, 2012
SchI	GAGTC	1 cut(s)	1316
ScrFI	CCNGG	4 cut(s)	369, 693, 847, 1673
SduI	GDGCHC	1 cut(s)	1627
SfaNI	GCATC	6 cut(s)	511, 533, 964, 1101, 1255, 1878
SfcI	CTRYAG	2 cut(s)	573, 738
Sfr274I	CTCGAG	1 cut(s)	1332
SlaI	CTCGAG	1 cut(s)	1332
SmiMI	CAYNNNNRTG	3 cut(s)	41, 1080, 1227
SmlI	CTYRAG	2 cut(s)	21, 1332
SmoI	CTYRAG	2 cut(s)	21, 1332
SseBI	AGGCCT	1 cut(s)	1790
SsiI	CCGC	3 cut(s)	1087, 1421, 1762
SspMI	CTAG	9 cut(s)	416, 528, 539, 1416, 1514, 1655, 1905, 2004, 2067
StuI	AGGCCT	1 cut(s)	1790
StyD4I	CCNGG	4 cut(s)	367, 691, 845, 1671
StyI	CCWWGG	3 cut(s)	1285, 1392, 1713
TaaI	ACNGT	4 cut(s)	110, 479, 1019, 1706
TaiI	ACGT	1 cut(s)	33
TaqI	TCGA	3 cut(s)	89, 139, 1333
TauI	GCSGC	2 cut(s)	1089, 1424
TfiI	GAWTC	6 cut(s)	91, 248, 828, 1217, 1658, 1874
Tru1I	TTAA	6 cut(s)	353, 405, 561, 801, 1148, 1793
Tru9I	TTAA	6 cut(s)	353, 405, 561, 801, 1148, 1793
TscAI	CASTG	4 cut(s)	484, 858, 1024, 1711
TseFI	GTSAC	3 cut(s)	31, 1346, 1587
TseI	GCWGC	4 cut(s)	391, 535, 1292, 1721
Tsp45I	GTSAC	3 cut(s)	31, 1346, 1587
TspDTI	ATGAA	5 cut(s)	333, 684, 1759, 1832, 2085
TspGWI	ACGGA	1 cut(s)	359
TspRI	CASTG	4 cut(s)	484, 858, 1024, 1711
Tth111I	GACNNNGTC	1 cut(s)	268
VspI	ATTAAT	1 cut(s)	1148
XagI	CCTNNNNNAGG	1 cut(s)	259
XapI	RAATTY	3 cut(s)	620, 1091, 1135
XbaI	TCTAGA	2 cut(s)	1654, 2066
XceI	RCATGY	4 cut(s)	217, 342, 381, 1460
XcmI	CCANNNNNNNNNTGG	1 cut(s)	770
XhoI	CTCGAG	1 cut(s)	1332
XmiI	GTMKAC	1 cut(s)	1741
XmnI	GAANNNNTTC	1 cut(s)	1197
XspI	CTAG	9 cut(s)	416, 528, 539, 1416, 1514, 1655, 1905, 2004, 2067
Zsp2I	ATGCAT	1 cut(s)	526

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.