Rh2BG082900

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
6403957 .. 6411808
7852 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG082900.1

Sequence Viewer

Length: 4290 bp
ATGGGCATGGTGATGCCAGCCTTTCTCCAGCTGGTTAATCTGTGTGTCATTGGCTTTGCTTTAGCTCTCCAAGGATCTACAGGATTAAATCCATCACCATCACCAGAATCTCTCTCTGTGAATCCTCCTATTGAGACAGCACCTGGTCCTCTTCCTCAAAGCAAGTCATTCGGAAGCAATGTGCCAAGCCCAGCATTACAGCCAAACGGGTCGGATTTGCACCCTGTGCCTGCAATGCCACCTCTTATGCCTCCCCCAGTGCCCCCTAAAATCGAAGGACAGGTACCATCCCTTTCACCAAGTACTCCAGCAGTGCTGCCACCACAGAATACAGCTCCTCCACCATTAGATGTACAAACTCATGCACCATCTGTGCTGCCAACTGTTCCCCCAAAAAAGACACCAGTTAATAATGGCCCTATCTCAATGCCAGTTGCTCCAGTTCCAACACCTCCGAGGAATGTGCCACCAATTTCACCAGTCCTCAATTCGAGTACACCAGAAACTTCACCATCAAGTTCTCATCAAGGAAATGTGCCAGTAAATAAGGTTCCCATACCAGAGCCAAATGCTCCACAGAACACAGCTCCTCCACCATTGGATGTACAAACTCATGCACTGTCTGTGCCGCCAACTGTTCCCCCAAAAAAGACACCAGTTAATAATGGTCCTATCTCAGTGCCAGTTGCTCCAGTTGCAACACCTCGGAGGAATGTGCCACCAATTTCACCAGTCCTCAATTCGAGTACACCAGAAACTTCACCATCAAGTTCTCATCAAGGAAATGTGCCAGTAAATAAGGTTCCCATTCCAGAGCCAAATGCTCCACAGAACACAGCTCCTCCACCATTAGATGTACAAACTCATGCACCGTCTGTGCCGCCAACTGTTCCCCCAAAAAAGACACCAGTTAATAATGGTTCTATCTCAGTGCCAGTTGCTCCAGTTGCAACACCTTGGAGGAATTTGCCACCAATTTCACCAGAACTGAATTCGAGTACACCAGAAACTTCACCAGTCCTCAATTCCAGTACGCCAGAAACTTCACCATCAATTTCTCATCAAGGAAATGTGCCAGTAAATAAGGTTCCCATACCAGAGACAAATGCTCCAGCACCTATTTCATCACTGCCAAGGGCATCGGGACCAAATCCATCTGTAGTCCATTCTACCACACCGAGTACAGCACCAACTACATTACCTATGCCAGTTGCATCACCAAGTACACTGCCTCAAAACCCACCTTCCAGTCATCCAGTTTCACCGGGAGAGTCTCCATCAACAACTCCTGATCCTGAAGTCTCTCCTGTATCATCTCCTCCCCCAAACATCAACCAGAAAAAGGATGGAAATTCAGTTGTTGCACCACCATATGAAGCTCCAAAGCCATCACTACCCATGGGCCGTGCTCCAGCTATAGCTCCATCTGTCAACAAACCTGTGGTATCATCTCCTACCCCAAAATCCAATTGGAAAAGGGGTAAAATGCCAGTTGTTGCACCCCCAATTGAAGCTCCCAAGCCATCACTCCCCACGAGTCATACCCCAGCTGAAGCTCCATCTGTCCCCAAACCAGTGGTATCATCACCTAGCCCCAGCATCAACAGGAAAAGGGGTCAAATACCAGTTGTTGCACCACCTTATGAAGCTCCCAAGTCATCAACACCCACGGCGCATACCCCAGCTAAAGCTCCATCTGTCCGCAAACCTGTGGTATCATCTCCTTCCCCCAGCATTCACTGGAAAAGGGGTGGAATACCGGTTGTTGCACCACCATATGAAGCTCCTAAGCCATATCTACCCATGAGTCGTGCCCCAGCTCAAGCTCCTTCTGTCCACAAACCTCTGAGACATTATAAACTTGCTCCTGGACCATCTGATTCATTCCCTGAACCTCCTTCTGATAAAGGATCTCGTTCTCCTGCATCATCGCCTCCAAGCTCATTGTATAAACATCATCATACCAGGAACAACATCACCAATCCTACTGCTGCACCATCATATTCAGTTTCTCCTTCCACTTCAAAACAGCAAGGTCCAGTGATTGCACCGGCATCAGTTCAAACAAGGAGGCGAAGACACTATGCTTCTCCACCCCTATATCCAGGGTCTTCAGCTCCCCCATCTCATTTACCTGTCACTCCATCAGCAAGCCATGTTTCACCTGCTCCTTCTCCATCTCTAAAAGATGCATCTGACTATACCAAAATACCCCCAATACGTTCTGCACCAGGGTCTTTATCAACAAGTCCAAAAATGCCACCTCTGCCACAAGTTCACGCATTACCACCTCCACCTCCCAATGCAGATTGTTTAGTAGGGACTTGTTCAGATCCCTATACAAATACCCCTCCTGGGTCACCTTGTATCTGTGTCTTGCCAATGCAAGTGGGACTGCGCCTTAGCGTTCCTCTCTATACTTTTTTCCCCTTAGTTTCGGAGCTAGCCCAGGAAATTGCAGTTGGGGTTTTCATGCAACAAAGTCAGGTTCGCATCATTGGAGCCAATGCTGCCAGTCAGAACCCAGAGAAGACAGTAGTCCTTATTGACTTGGTTCCCCTGGGAGAAAAGTTTGACAGCACCACAGCTTTTTTGACTGACCAGAGATTTTGGCATAGACAAGTTGTTATAAAAGCATCCTACTTTGGGGACTATGAAGTACTGTATGTGCGCTATCCAGGTTTGCCTCCATCTCCTCCTTCTTCAGACGCTGATGTAATAAATGCCGGACCATATCCTGGTAATGACAATAATGCAAGGGCGGTAAAGCCCTTTGGGGTTAATGTGTCCAAGAGGAGGCATAAAAGTGGGCTTAGTGGGGGCATAATTGCTATTATTGCTCTGTCATCCTTTGTAGTCATTGCTTTATGCTCTGCTGCTGCTTGGGTTTTCCTATTCAAACCTAGAGACCGTGCTACTCAACTATCATCAACTCCACGGACTTTGCTACCTTCTATTGGAAAACGATCAGTTATTGTTGGCTCTATGAGGGATAGTAGGCACAGTTCCGCATCATTATCATTTGGATCGAGCATTGCAACATATACTGGATCTGCTAATACTTTCAGTGCAAGTGACATAGCAAAAGCCACTAACAATTTGGATCCTTCAAGAATACTCGGGGAAGGTGGCTTTGGGCTTGTTTACAGTGGTGATCTTGAAGACGGAACCAAGGTTGCCGTCAAAGTTCTAAAAAGAGATGATCAGCAGGGTGGTCGGGAGTTTTTGGCTGAAGTTGAGATGCTTAGTCGCCTTCATCATCGAAACTTGGTCAAGTTGATTGGTATATGTGTAGAAGAGCACCGCTGCTTGGTTTATGAGCTCATTCCTAATGGCAGTGTGGAATCTCATTTGCATGGAATTGACAAGGAAACTGCTCCACTCAGTTGGGGTCCCCGGATGAAGATAGCACTAGGTGCTGCTCGGGGTCTGGCATATTTACACGAGGATTCCAGCCCCCGTGTCATTCACAGAGATTTCAAATCCAGCAATATTTTGCTGGAAAATGATTTTACACCAAAAGTGTCTGATTTTGGTTTGGCACGGACTGCATTGGATGAGGAAAACAGACACATATCAACACGTGTAATGGGAACTTTTGGGTACGTGGCTCCAGAATATGCAATGACGGGGCATCTTCTTGTCAAGAGTGATGTTTACAGCTATGGGGTTGTCCTTCTTGAACTCTTAAGCGGAAGAAAACCAGTAGACATGTCACAGCCACCTGGTGAAGAAAACCTGGTTGCATGGGCCCGTCCGCTGCTGACAAGTAGAGAAGGGTTGGAGGCACTCGTAGATAAAAATCTAGGATCTGATGTTCCATTTGACAGTATTGCGAAAGTGGCTGCTATTGCTTCAATGTGTGTACAACCAGAGGTATCACACCGACCTTTTATGGGGGAGGTTGTTCAGGCCTTAAAGCTGGTATGTAATGAGTTTGATGAGTCAAAAGAAATAGGTTCACGGAGTTCTAGCCGAGAGGATTTGTCCATTGACATGGCTGCTGGTGCAAGTACTACCTCGGAACAGATGCCATATCCTTTCCAGCGCCAATATTCTGCTCCTACCTATGATTCAGACCTTGAGACAGAGAGGGAAGCAACATTGTTGAAGTTGTACAGTACGTCAATGAGAACTGGGAGGGAAGATTCTGAGTCATTTCGGCGGCACTCGAGTTCAGGTCCCTTGGGAACAGGAAGGAGTAAGCAGTTCTGGCAAAAACTGAGATCATCTGGAGGCAGTGTGAGTGAACATGGGTTTATGTTAAAGTTATGGCAAGGATCGCATTGA

Protein Analysis

1429

Amino Acids

151.16

Weight (kDa)

9.25

Isoelectric Point (pI)

70.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALE2_N PF23180 778 - 896 1.3e-58 Receptor-like PK ALE2 N-terminal domain
Pkinase PF00069 1037 - 1241 1.6e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1038 - 1306 3.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1857, 2630
AarI CACCTGC 1 cut(s) 2173
Acc36I ACCTGC 1 cut(s) 2173
Acc65I GGTACC 1 cut(s) 283
AccB1I GGYRCC 1 cut(s) 283
AccB7I CCANNNNNTGG 1 cut(s) 2738
AccI GTMKAC 1 cut(s) 3708
AciI CCGC 9 cut(s) 629, 881, 1702, 2762, 3009, 3304, 3693, 3758, 4165
AcsI RAATTY 3 cut(s) 964, 991, 1351
AcuI CTGAAG 5 cut(s) 1317, 1572, 2097, 2688, 3252
AcvI CACGTG 1 cut(s) 3584
AdeI CACNNNGTG 3 cut(s) 226, 3416, 3728
AfiI CCNNNNNNNGG 8 cut(s) 1342, 2355, 2646, 2738, 2796, 2957, 3310, 3896
AflII CTTAAG 1 cut(s) 3688
AflIII ACRYGT 3 cut(s) 3581, 3583, 3711
AgeI ACCGGT 1 cut(s) 1759
AjuI GAANNNNNNNTTGG 4 cut(s) 2445, 2477, 3117, 3149
AloI GAACNNNNNNTCC 2 cut(s) 3801, 3833
Alw21I GWGCWC 3 cut(s) 1411, 3303, 3324
Alw26I GTCTC 7 cut(s) 128, 1094, 1278, 1306, 1843, 2901, 4079
AlwNI CAGNNNCTG 2 cut(s) 143, 2711
Ama87I CYCGRG 3 cut(s) 3119, 3423, 4171
AoxI GGCC 4 cut(s) 415, 1402, 3750, 3912
ApaI GGGCCC 1 cut(s) 3754
ApoI RAATTY 3 cut(s) 964, 991, 1351
AsiGI ACCGGT 1 cut(s) 1759
Asp718I GGTACC 1 cut(s) 283
AspLEI GCGC 4 cut(s) 1675, 2400, 2673, 4050
AsuC2I CCSGG 2 cut(s) 1266, 3397
AsuNHI GCTAGC 1 cut(s) 2443
AvaI CYCGRG 3 cut(s) 3119, 3423, 4171
AvaII GGWCC 8 cut(s) 146, 668, 1145, 1871, 2036, 2729, 3392, 4181
BaeGI GKGCMC 3 cut(s) 264, 1816, 3754
BamHI GGATCC 1 cut(s) 3103
BanI GGYRCC 1 cut(s) 283
BanII GRGCYC 2 cut(s) 3324, 3754
BarI GAAGNNNNNNTAC 2 cut(s) 267, 299
BauI CACGAG 2 cut(s) 1534, 3443
BbrPI CACGTG 1 cut(s) 3584
BbsI GAAGAC 4 cut(s) 2083, 2103, 2537, 3168
Bbv12I GWGCWC 3 cut(s) 1411, 3303, 3324
BceAI ACGGC 3 cut(s) 1389, 1686, 3164
BcgI CGANNNNNNTGC 6 cut(s) 151, 185, 445, 479, 3197, 3231
BclI TGATCA 1 cut(s) 3202
BcnI CCSGG 2 cut(s) 1266, 3397
BcoDI GTCTC 7 cut(s) 128, 1094, 1278, 1306, 1843, 2901, 4079
BfaI CTAG 6 cut(s) 1590, 2444, 2904, 3413, 3806, 3972
BfmI CTRYAG 3 cut(s) 78, 1158, 1416
BfoI RGCGCY 1 cut(s) 4051
BfrI CTTAAG 1 cut(s) 3688
BfuAI ACCTGC 1 cut(s) 2173
BmcAI AGTACT 3 cut(s) 304, 2661, 4015
Bme18I GGWCC 8 cut(s) 146, 668, 1145, 1871, 2036, 2729, 3392, 4181
BmeT110I CYCGRG 3 cut(s) 3119, 3423, 4171
BmrI ACTGGG 2 cut(s) 251, 4146
BmtI GCTAGC 1 cut(s) 2447
BmuI ACTGGG 2 cut(s) 251, 4146
BoxI GACNNNNGTC 1 cut(s) 2537
BpiI GAAGAC 4 cut(s) 2083, 2103, 2537, 3168
BpmI CTGGAG 9 cut(s) 11, 291, 423, 675, 927, 1095, 1395, 3597, 4254
Bpu10I CCTNAGC 2 cut(s) 1788, 2402
BpuEI CTTGAG 2 cut(s) 1806, 4103
BpuMI CCSGG 2 cut(s) 1266, 3397
BsaAI YACGTR 2 cut(s) 3584, 3607
BsaBI GATNNNNATC 1 cut(s) 3801
BsaI GGTCTC 1 cut(s) 2901
BsaWI WCCGGW 1 cut(s) 1759
Bsc4I CCNNNNNNNGG 8 cut(s) 1342, 2355, 2646, 2738, 2796, 2957, 3310, 3896
Bse118I RCCGGY 2 cut(s) 1759, 2050
Bse3DI GCAATG 5 cut(s) 184, 240, 2859, 3033, 3630
Bse8I GATNNNNATC 1 cut(s) 3801
BseGI GGATG 8 cut(s) 287, 607, 1252, 1351, 2636, 2846, 3405, 3562
BseJI GATNNNNATC 1 cut(s) 3801
BseLI CCNNNNNNNGG 8 cut(s) 1342, 2355, 2646, 2738, 2796, 2957, 3310, 3896
BseMI GCAATG 5 cut(s) 184, 240, 2859, 3033, 3630
BseMII CTCAG 6 cut(s) 690, 942, 1838, 3397, 4143, 4214
BseRI GAGGAG 6 cut(s) 327, 579, 831, 1308, 2685, 2809
BseSI GKGCMC 3 cut(s) 264, 1816, 3754
BseYI CCCAGC 6 cut(s) 190, 1546, 1595, 1681, 1730, 1816
BsgI GTGCAG 2 cut(s) 1977, 2211
BshFI GGCC 4 cut(s) 417, 1404, 3752, 3914
BshNI GGYRCC 1 cut(s) 283
BshTI ACCGGT 1 cut(s) 1759
BsiHKAI GWGCWC 3 cut(s) 1411, 3303, 3324
BsiHKCI CYCGRG 3 cut(s) 3119, 3423, 4171
BsiSI CCGG 5 cut(s) 1265, 1760, 2051, 2727, 3397
BslFI GGGAC 7 cut(s) 1158, 1550, 2335, 2406, 2663, 3378, 4167
BslI CCNNNNNNNGG 8 cut(s) 1342, 2355, 2646, 2738, 2796, 2957, 3310, 3896
BsmAI GTCTC 7 cut(s) 128, 1094, 1278, 1306, 1843, 2901, 4079
BsmFI GGGAC 7 cut(s) 1158, 1550, 2335, 2406, 2663, 3378, 4167
BsmI GAATGC 1 cut(s) 1734
BsnI GGCC 4 cut(s) 417, 1404, 3752, 3914
Bso31I GGTCTC 1 cut(s) 2901
BsoBI CYCGRG 3 cut(s) 3119, 3423, 4171
Bsp120I GGGCCC 1 cut(s) 3750
Bsp1286I GDGCHC 6 cut(s) 264, 1411, 1816, 3303, 3324, 3754
Bsp1407I TGTACA 5 cut(s) 352, 604, 856, 3865, 4116
Bsp19I CCATGG 1 cut(s) 1398
BspACI CCGC 9 cut(s) 629, 881, 1702, 2762, 3009, 3304, 3693, 3758, 4165
BspANI GGCC 4 cut(s) 417, 1404, 3752, 3914
BspCNI CTCAG 6 cut(s) 689, 941, 1839, 3396, 4144, 4215
BspMI ACCTGC 1 cut(s) 2173
BspOI GCTAGC 1 cut(s) 2447
BspQI GCTCTTC 1 cut(s) 3291
BspT107I GGYRCC 1 cut(s) 283
BspTI CTTAAG 1 cut(s) 3688
BspTNI GGTCTC 1 cut(s) 2901
BsrDI GCAATG 5 cut(s) 184, 240, 2859, 3033, 3630
BsrFI RCCGGY 2 cut(s) 1759, 2050
BsrGI TGTACA 5 cut(s) 352, 604, 856, 3865, 4116
BssAI RCCGGY 2 cut(s) 1759, 2050
BssSI CACGAG 2 cut(s) 1534, 3443
BssT1I CCWWGG 6 cut(s) 70, 956, 1133, 1398, 3171, 4185
Bst2BI CACGAG 2 cut(s) 1534, 3443
Bst6I CTCTTC 2 cut(s) 156, 3291
BstAFI CTTAAG 1 cut(s) 3688
BstAPI GCANNNNNTGC 3 cut(s) 226, 3416, 3548
BstAUI TGTACA 5 cut(s) 352, 604, 856, 3865, 4116
BstBAI YACGTR 2 cut(s) 3584, 3607
BstC8I GCNNGC 4 cut(s) 18, 231, 2152, 2445
BstDSI CCRYGG 3 cut(s) 1398, 1668, 2936
BstEII GGTNACC 1 cut(s) 2358
BstF5I GGATG 8 cut(s) 287, 607, 1252, 1351, 2636, 2846, 3405, 3562
BstH2I RGCGCY 1 cut(s) 4051
BstHHI GCGC 4 cut(s) 1675, 2400, 2673, 4050
BstMAI GTCTC 7 cut(s) 128, 1094, 1278, 1306, 1843, 2901, 4079
BstNSI RCATGY 1 cut(s) 3715
BstPAI GACNNNNGTC 1 cut(s) 2537
BstPI GGTNACC 1 cut(s) 2358
BstSFI CTRYAG 3 cut(s) 78, 1158, 1416
BstSLI GKGCMC 3 cut(s) 264, 1816, 3754
BstV2I GAAGAC 4 cut(s) 2083, 2103, 2537, 3168
BstX2I RGATCY 6 cut(s) 74, 1910, 2332, 3050, 3103, 3809
BstXI CCANNNNNNTGG 3 cut(s) 1576, 3387, 3997
BstYI RGATCY 6 cut(s) 74, 1910, 2332, 3050, 3103, 3809
BsuRI GGCC 4 cut(s) 417, 1404, 3752, 3914
BtgI CCRYGG 3 cut(s) 1398, 1668, 2936
BtgZI GCGATG 1 cut(s) 1914
BtsCI GGATG 8 cut(s) 287, 607, 1252, 1351, 2636, 2846, 3405, 3562
BtsI GCAGTG 5 cut(s) 318, 1127, 1226, 3343, 4246
BveI ACCTGC 1 cut(s) 2173
Cac8I GCNNGC 4 cut(s) 18, 231, 2152, 2445
CaiI CAGNNNCTG 2 cut(s) 143, 2711
CfoI GCGC 4 cut(s) 1675, 2400, 2673, 4050
Cfr10I RCCGGY 2 cut(s) 1759, 2050
CseI GACGC 1 cut(s) 2717
CsiI ACCWGGT 3 cut(s) 142, 3724, 3738
CspAI ACCGGT 1 cut(s) 1759
CspCI CAANNNNNGTGG 4 cut(s) 2370, 2405, 2925, 2960
DraIII CACNNNGTG 3 cut(s) 226, 3416, 3728
Eam1104I CTCTTC 2 cut(s) 156, 3291
EarI CTCTTC 2 cut(s) 156, 3291
Ecl136II GAGCTC 1 cut(s) 3322
Eco130I CCWWGG 6 cut(s) 70, 956, 1133, 1398, 3171, 4185
Eco147I AGGCCT 1 cut(s) 3914
Eco24I GRGCYC 2 cut(s) 3324, 3754
Eco31I GGTCTC 1 cut(s) 2901
Eco47I GGWCC 8 cut(s) 146, 668, 1145, 1871, 2036, 2729, 3392, 4181
Eco53kI GAGCTC 1 cut(s) 3322
Eco57I CTGAAG 5 cut(s) 1317, 1572, 2097, 2688, 3252
Eco72I CACGTG 1 cut(s) 3584
Eco88I CYCGRG 3 cut(s) 3119, 3423, 4171
Eco91I GGTNACC 1 cut(s) 2358
EcoICRI GAGCTC 1 cut(s) 3322
EcoO109I RGGNCCY 2 cut(s) 3392, 4181
EcoO65I GGTNACC 1 cut(s) 2358
EcoRI GAATTC 1 cut(s) 991
EcoT14I CCWWGG 6 cut(s) 70, 956, 1133, 1398, 3171, 4185
EcoT22I ATGCAT 1 cut(s) 2194
EcoT38I GRGCYC 2 cut(s) 3324, 3754
ErhI CCWWGG 6 cut(s) 70, 956, 1133, 1398, 3171, 4185
FaqI GGGAC 7 cut(s) 1158, 1550, 2335, 2406, 2663, 3378, 4167
FauNDI CATATG 2 cut(s) 1372, 1777
FbaI TGATCA 1 cut(s) 3202
FblI GTMKAC 1 cut(s) 3708
FokI GGATG 8 cut(s) 274, 614, 1239, 1358, 2623, 2833, 3412, 3569
FriOI GRGCYC 2 cut(s) 3324, 3754
FspBI CTAG 6 cut(s) 1590, 2444, 2904, 3413, 3806, 3972
GlaI GCGC 4 cut(s) 1674, 2399, 2672, 4049
GsaI CCCAGC 6 cut(s) 194, 1550, 1599, 1685, 1734, 1820
GsuI CTGGAG 9 cut(s) 11, 291, 423, 675, 927, 1095, 1395, 3597, 4254
HaeII RGCGCY 1 cut(s) 4051
HaeIII GGCC 4 cut(s) 417, 1404, 3752, 3914
HapII CCGG 5 cut(s) 1265, 1760, 2051, 2727, 3397
HgaI GACGC 1 cut(s) 2717
HhaI GCGC 4 cut(s) 1675, 2400, 2673, 4050
Hin6I GCGC 4 cut(s) 1673, 2398, 2671, 4048
HinP1I GCGC 4 cut(s) 1673, 2398, 2671, 4048
HincII GTYRAC 1 cut(s) 1432
HindII GTYRAC 1 cut(s) 1432
HpaII CCGG 5 cut(s) 1265, 1760, 2051, 2727, 3397
HpyCH4IV ACGT 4 cut(s) 2221, 3583, 3606, 4124
HpySE526I ACGT 4 cut(s) 2221, 3583, 3606, 4124
HspAI GCGC 4 cut(s) 1673, 2398, 2671, 4048
KflI GGGWCCC 1 cut(s) 3392
KpnI GGTACC 1 cut(s) 287
Ksp22I TGATCA 1 cut(s) 3202
LguI GCTCTTC 1 cut(s) 3291
MabI ACCWGGT 3 cut(s) 142, 3724, 3738
MaeI CTAG 6 cut(s) 1590, 2444, 2904, 3413, 3806, 3972
MaeII ACGT 4 cut(s) 2221, 3583, 3606, 4124
MaeIII GTNAC 4 cut(s) 2137, 2358, 3074, 3714
MfeI CAATTG 2 cut(s) 1468, 1506
MflI RGATCY 6 cut(s) 74, 1910, 2332, 3050, 3103, 3809
MhlI GDGCHC 6 cut(s) 264, 1411, 1816, 3303, 3324, 3754
MlyI GAGTC 5 cut(s) 1280, 1546, 1816, 3953, 4163
MmeI TCCRAC 3 cut(s) 192, 470, 3762
Mph1103I ATGCAT 1 cut(s) 2194
MseI TTAA 9 cut(s) 36, 86, 408, 660, 912, 2781, 3689, 3917, 4265
MslI CAYNNNNRTG 4 cut(s) 11, 2805, 3354, 3995
MspA1I CMGCKG 4 cut(s) 31, 1550, 3306, 3760
MspCI CTTAAG 1 cut(s) 3688
MspI CCGG 5 cut(s) 1265, 1760, 2051, 2727, 3397
MunI CAATTG 2 cut(s) 1468, 1506
Mva1269I GAATGC 1 cut(s) 1734
NciI CCSGG 2 cut(s) 1266, 3397
NcoI CCATGG 1 cut(s) 1398
NdeI CATATG 2 cut(s) 1372, 1777
NheI GCTAGC 1 cut(s) 2443
NmeAIII GCCGAG 1 cut(s) 4001
NmuCI GTSAC 4 cut(s) 2137, 2358, 3074, 3714
NsiI ATGCAT 1 cut(s) 2194
NspI RCATGY 1 cut(s) 3715
PaeR7I CTCGAG 1 cut(s) 4171
PaqCI CACCTGC 1 cut(s) 2173
PasI CCCWGGG 1 cut(s) 2560
PceI AGGCCT 1 cut(s) 3914
PciI ACATGT 1 cut(s) 3711
PciSI GCTCTTC 1 cut(s) 3291
PctI GAATGC 1 cut(s) 1734
PfeI GAWTC 7 cut(s) 107, 121, 1880, 3344, 3449, 4073, 4148
PflMI CCANNNNNTGG 1 cut(s) 2738
PfoI TCCNGGA 1 cut(s) 1867
PinAI ACCGGT 1 cut(s) 1759
PleI GAGTC 5 cut(s) 1279, 1545, 1815, 3952, 4162
PmaCI CACGTG 1 cut(s) 3584
PmlI CACGTG 1 cut(s) 3584
PpsI GAGTC 5 cut(s) 1279, 1545, 1815, 3952, 4162
Ppu21I YACGTR 2 cut(s) 3584, 3607
PpuMI RGGWCCY 2 cut(s) 3392, 4181
PscI ACATGT 1 cut(s) 3711
PshAI GACNNNNGTC 1 cut(s) 2537
PsiI TTATAA 2 cut(s) 1857, 2630
Psp124BI GAGCTC 1 cut(s) 3324
Psp5II RGGWCCY 2 cut(s) 3392, 4181
PspCI CACGTG 1 cut(s) 3584
PspEI GGTNACC 1 cut(s) 2358
PspFI CCCAGC 6 cut(s) 190, 1546, 1595, 1681, 1730, 1816
PspOMI GGGCCC 1 cut(s) 3750
PspPPI RGGWCCY 2 cut(s) 3392, 4181
PspXI VCTCGAGB 1 cut(s) 4171
PsrI GAACNNNNNNTAC 8 cut(s) 534, 566, 786, 818, 1071, 1103, 2989, 3021
PstNI CAGNNNCTG 2 cut(s) 143, 2711
PsuI RGATCY 6 cut(s) 74, 1910, 2332, 3050, 3103, 3809
PvuII CAGCTG 2 cut(s) 31, 1550
RseI CAYNNNNRTG 4 cut(s) 11, 2805, 3354, 3995
SacI GAGCTC 1 cut(s) 3324
SapI GCTCTTC 1 cut(s) 3291
SaqAI TTAA 9 cut(s) 36, 86, 408, 660, 912, 2781, 3689, 3917, 4265
ScaI AGTACT 3 cut(s) 304, 2661, 4015
SchI GAGTC 5 cut(s) 1280, 1546, 1816, 3953, 4163
SduI GDGCHC 6 cut(s) 264, 1411, 1816, 3303, 3324, 3754
SexAI ACCWGGT 3 cut(s) 142, 3724, 3738
SfcI CTRYAG 3 cut(s) 78, 1158, 1416
Sfr274I CTCGAG 1 cut(s) 4171
SinI GGWCC 8 cut(s) 146, 668, 1145, 1871, 2036, 2729, 3392, 4181
SlaI CTCGAG 1 cut(s) 4171
SmiMI CAYNNNNRTG 4 cut(s) 11, 2805, 3354, 3995
SmlI CTYRAG 4 cut(s) 1821, 3688, 4082, 4171
SmoI CTYRAG 4 cut(s) 1821, 3688, 4082, 4171
SseBI AGGCCT 1 cut(s) 3914
SsiI CCGC 9 cut(s) 629, 881, 1702, 2762, 3009, 3304, 3693, 3758, 4165
SspI AATATT 2 cut(s) 3493, 4055
SspMI CTAG 6 cut(s) 1590, 2444, 2904, 3413, 3806, 3972
SstI GAGCTC 1 cut(s) 3324
StuI AGGCCT 1 cut(s) 3914
StyI CCWWGG 6 cut(s) 70, 956, 1133, 1398, 3171, 4185
TaiI ACGT 4 cut(s) 2224, 3586, 3609, 4127
TaqI TCGA 7 cut(s) 273, 491, 743, 995, 3029, 3262, 4172
TauI GCSGC 3 cut(s) 631, 883, 4168
TfiI GAWTC 7 cut(s) 107, 121, 1880, 3344, 3449, 4073, 4148
Tru1I TTAA 9 cut(s) 36, 86, 408, 660, 912, 2781, 3689, 3917, 4265
Tru9I TTAA 9 cut(s) 36, 86, 408, 660, 912, 2781, 3689, 3917, 4265
TseFI GTSAC 4 cut(s) 2137, 2358, 3074, 3714
Tsp45I GTSAC 4 cut(s) 2137, 2358, 3074, 3714
TspDTI ATGAA 9 cut(s) 1113, 1389, 1659, 1794, 1872, 2461, 2670, 3245, 3416
TspGWI ACGGA 4 cut(s) 2953, 3180, 3559, 3979
Van91I CCANNNNNTGG 1 cut(s) 2738
Vha464I CTTAAG 1 cut(s) 3688
VpaK11BI GGWCC 8 cut(s) 146, 668, 1145, 1871, 2036, 2729, 3392, 4181
XapI RAATTY 3 cut(s) 964, 991, 1351
XceI RCATGY 1 cut(s) 3715
XcmI CCANNNNNNNNNTGG 3 cut(s) 1343, 1467, 3097
XhoI CTCGAG 1 cut(s) 4171
XmiI GTMKAC 1 cut(s) 3708
XspI CTAG 6 cut(s) 1590, 2444, 2904, 3413, 3806, 3972
ZrmI AGTACT 3 cut(s) 304, 2661, 4015
Zsp2I ATGCAT 1 cut(s) 2194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.