FvH4_1g07530

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
4007078 .. 4014456
7379 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g07530.t4

Sequence Viewer

Length: 3858 bp
ATGGGAATGGTGATGCCAGCCTTTCTCCAGCTGGTTAATCTCTGTTTCATTGGCTTTGCTTTAGCTCTCCAAGGATCTACCGGATTGAATCCATCACCGTCACCAGAATCTCTGTCTGTGAACCCTCCTATTGAGACAGCTCCTGGCCCTCTTCCTCACAGTAAGTCATTCAGCAGCAATGTACCAAGCCCAGCGTTACAGCCAAATGGGTCAGATTTGCACCCTGCGCCTGCAATGCCACCTCTTATGCCTCCCCCGGTGCCCCCTAAAATGGAAGGACAGGTACCATCCCTTTCACCAAGTACTCCAACAGTGTTGCCACCACAGATATCAGCTCCTCCGCCATTAGATGTACAAACTCATGCACCGTCTGTGCCGCCAACTGTTCCCCCCAAAAAGACACCAGTTAATAACGGTCCTATCTCAGTACCAGTTGCTCCAGTTGCAACACCTTCGAGGAATATGCCACCAGTATCACCAGTCCTCAATTCAAGCACACCAGAAATTTCACCATCAAGTTCTCAGGAAGGAAATGTGCCAGTAAATAAGGTTCCCATACCAGAACCAAATGCTCCAGCACCTATTTCATCACTGCCACGGGCATCAGGACCGAATCCATCTGTAGTCCATTCTATCACACCGAGTATAGCACCAGCTACATTACCTATACCAGTTGCATCACCAAGTAAACTGCCTCAAAACCCACCGTCAAGTCTTCCAGTTACACCAGGAGAGCCTCCAACCACACTTCCTGATCCTGAAGTCTCTCCTGTATCATCTCCTCCCCCAAGCATCAGCCAGAAAAAAGATGGGAATCCAGTTGTTGCACCACCATTTGAAGCTCCAAAGCCATCACTACCCATAGGACATACTCCAGCTATAGCTCCATCTGTCGACAAACCTGAGGTATCATCTCCTACCCCGAGCTCCAATTGGAAAAGGGATAAAACACCAGCTGTTGCACCCCCAGTTGAAGCTCCCAAGCCATCACTAACCATGGGCCATACTCCAGCTATAGCTCCATCTGTCAACAAACCTGTGGTATCATCTCCTACCCCGAGCTCCAGTGGGAAAAGGGATAAAACACCAGTTGTTGCACCCCCAGTTGAAGCTCCCAAGCCACCACTCCCCACAAGTCATTCCCCAGCTGAAGCTCCATCTGTCCCCAAACCAGTGGCATCATCACCTACCCCCAGCATTAACAGGAAAAGAGGTCAAATACCAGTTGTTGCACCACCATATGAAGCTCCCAGGCAATCACCCATGGGGCATACCCCAGCTAAAGCTCCATCTGTCCACAAACCTGTGGTATCGTCTCCTTCTCCCAGCATTCAATGGAAAAGGGGTGGAACACCAGTTGTTGCACCACCATATGAAGCTCCTAAGGCATCACTACCCATTAGTAGTTCCCCAGCTCAAGCTCCTTCTGTCCACAAACCTGTGAGACATCATAAACTTGCTCCTGGACCATCTGATTCAGTCCCTGAACCTCCTTCTGCTAATGGATATAGTTCTCCTGAATCATCGCCTCCAAGCTCATTCTATAAACATCATCATTCAAGGAACAACATTACCAATCCTTCTACAGCACCATCGTATTCGGTTTCTCCTTCTACTTCAAAACAGCAAGGTCCAGTGATTGCACCGACATCAATTCAAACAAGGAGGCAAACACACTATGCTCCTCCACCCCTATATCCAGTGTCAGCTCCCCCATCTCATTTACTAGTCACTCCACCAGCAAGCCATGATTCACCTGCTCCTTCTCCAGTTATTAAAGATGGATCTGACTATACCAAAATGCCCCCAACTCATTCAGCACCAGGGTCTTTATCAACAAGTCCAAAAGTGCCACCTCTGGCACAAGTTCATGCATTACCACCTCCACCTCCCAATGAAGATTGTGCATCAACGATTTGTTCAGATCCCTATACAAGTACCCCTCCTGGGTCACCTTGTATCTGTGTATTGCCTATGCAAGTTGGACTGCGCCTTAGCGTTCCTCTCTACACTTTTTTCCCCTTGGTTTCGGAGCTAGCCCAGGAAATTGCAGTGGGGGTTTTCATGCAACAAAGTCAGGTTCGCATCATTGGAGCCAATGCTGCTAATCAGGACCCAGAGAAAACAGTAGTCCTGATTGACTTGGTTCCCCTGGGAGAAAAGTTTGACAGCACCACAGCTTTCTTGACTGACCAGAGGTTTTGGCATAGACAAGTTGTCATAAAAGCATCCTACTTTGGGGACTATGAAGTACTATATGTGCGCTATCCAGGTTTGCCTCCATCTCCTCCTTCTTCAGACGCTGATGTATTAAATGCTGGACCATATCCTGGTAATACCAATAAGGCTAAGCCCTTTGGGGTTGCTGTGCCCAAGAGGAGGCATAAAAGTGGGCTTAGTGGTGGCATAATTGCTATTATTGCTCTGTCATCCTTCGTAGTCATTGCTTTATGCTCTGCTGCTGCTTGGGTTTTCCTACTCAAACCTAGAGACTGTGCTTCTCAACTATCATCAACTCCACGGAGTTTGCTACCTTCTATTGGAAAACGATCAGGTACTGTTGGGTCTATGAGGGATAGTAGGCATAGTTCTGCATCATTGTCATTTGGATCTAGCATTGCAACATATACAGGATCTGCTAATACTTTCAGTGCAAGTGACATAGCGAAAGCCACTGACAATTTTGATCCTTCAAGAATACTCGGAGAAGGTGGCTTTGGGCTTGTTTACAGTGGTGATCTTGAAGACGGAACCAAGGTTGCTGTCAAAGTTCTAAAAAGAGATGATCAACAGGGTGGTCGGGAGTTTTTGGCTGAAGTTGAGATGCTCAGTCGCCTTCATCATCGAAACTTGGTCAAGTTGATTGGCATATGTGTAGAAGAGCACCGCTGCTTGGTTTATGAGCTCATTCCTAATGGCAGTGTGGAATCTCATTTGCATGGAATTGACAAGGAAGCTGCTCCACTTAGTTGGGGTCCCCGGATGAAGATAGCACTTGGTGCTGCTCGTGGTTTGGCATATTTACACGAGGATTCCAGCCCCCGTGTCATACACAGAGATTTCAAATCCAGCAATATTTTGCTGGAAAATGATTTTACACCAAAAGTGTCTGATTTTGGTTTGGCACGGACTGCATTGGATGAGGAAAACAGACACATATCAACACGTGTAATGGGAACTTTTGGGTATGTGGCTCCAGAATATGCAATGACGGGGCATCTTCTTGTCAAGAGTGATGTTTACAGCTATGGGGTTGTTCTTCTTGAGCTCTTAAGTGGAAGAAAACCAGTAGACATGTCACAGCCACCTGGTGAAGAAAATCTGGTTGCATGGGCCCGTCCACTGCTCACAAGTCGTGAAGGGTTGGAAGCACTTGTAGATAAAAATCTAGGATCTGATGTTCCATTTGACAGTATAGCAAAAGTGGCTGCTATTGCTTCAATGTGTGTGCAACCAGAGGTATCACACCGACCTTTTATGGGGGAGGTTGTTCAGGCCTTAAAGCTAGTATGTAATGAGTTTGATGAGGCAAAAGAAATAGGTTCACGAAGTTCTAGCCGAGATGATTTATCCATTGACATGGCTGCTGCTGCAAGCACTACCTCGGAGCAGATGCCATATCCTTTCCAGCGCCAATATTCTGCTCCTACCTATGATTCAGGCCTTGACACAGAGAGGGAAGCTTCATTGTTGAAGTTGTACAGTACGTCAGTGAGAACTGGGAGGGAAGATTCAGAGTCATTCCGGAGGCACTCAAGTTCAGGTCCCTTGGGAACAGGAAGGAGTAAGCAGTTCTGGCAGAAACTGAGATCATCTGGAGGCAGTGTGAGTGAACATGGGTTTATGTTGAAGTTATGA

Protein Analysis

1286

Amino Acids

135.63

Weight (kDa)

8.65

Isoelectric Point (pI)

68.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALE2_N PF23180 597 - 715 1.9e-58 Receptor-like PK ALE2 N-terminal domain
Pkinase PF00069 853 - 1057 1.2e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 854 - 1122 4.1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1765
Acc36I ACCTGC 1 cut(s) 1765
Acc65I GGTACC 1 cut(s) 283
AccB1I GGYRCC 2 cut(s) 259, 283
AccB7I CCANNNNNTGG 1 cut(s) 2330
AccI GTMKAC 2 cut(s) 894, 3291
AccIII TCCGGA 1 cut(s) 3744
AciI CCGC 3 cut(s) 341, 377, 2887
AclWI GGATC 8 cut(s) 82, 749, 1792, 1919, 2617, 2641, 2681, 3400
AcsI RAATTY 1 cut(s) 504
AcuI CTGAAG 4 cut(s) 780, 1170, 2280, 2835
AcvI CACGTG 1 cut(s) 3167
AdeI CACNNNGTG 2 cut(s) 2999, 3311
AfiI CCNNNNNNNGG 8 cut(s) 271, 1947, 2238, 2330, 2379, 2540, 2893, 3479
AflII CTTAAG 1 cut(s) 3271
AflIII ACRYGT 3 cut(s) 3164, 3166, 3294
AhdI GACNNNNNGTC 1 cut(s) 2216
AhlI ACTAGT 1 cut(s) 1726
AjuI GAANNNNNNNTTGG 2 cut(s) 2700, 2732
AloI GAACNNNNNNTCC 2 cut(s) 3384, 3416
Alw21I GWGCWC 5 cut(s) 929, 1064, 2886, 2907, 3270
Alw26I GTCTC 5 cut(s) 128, 769, 1320, 1438, 2484
AlwI GGATC 8 cut(s) 82, 749, 1792, 1919, 2617, 2641, 2681, 3400
AlwNI CAGNNNCTG 6 cut(s) 143, 1484, 2303, 2558, 2636, 3805
Ama87I CYCGRG 2 cut(s) 922, 1057
Aor13HI TCCGGA 1 cut(s) 3744
AoxI GGCC 5 cut(s) 145, 1000, 3333, 3495, 3661
ApaI GGGCCC 1 cut(s) 3337
ApoI RAATTY 1 cut(s) 504
Asp718I GGTACC 1 cut(s) 283
AspLEI GCGC 4 cut(s) 229, 1992, 2265, 3633
AsuC2I CCSGG 2 cut(s) 257, 2980
AsuNHI GCTAGC 1 cut(s) 2035
AvaI CYCGRG 2 cut(s) 922, 1057
AvaII GGWCC 8 cut(s) 416, 608, 1466, 1631, 2113, 2321, 2975, 3764
AxyI CCTNAGG 2 cut(s) 903, 1383
BaeGI GKGCMC 3 cut(s) 264, 2373, 3337
BanI GGYRCC 2 cut(s) 259, 283
BanII GRGCYC 5 cut(s) 929, 1064, 2907, 3270, 3337
BarI GAAGNNNNNNTAC 2 cut(s) 267, 299
BauI CACGAG 2 cut(s) 3006, 3026
BbrPI CACGTG 1 cut(s) 3167
BbsI GAAGAC 2 cut(s) 707, 2751
Bbv12I GWGCWC 5 cut(s) 929, 1064, 2886, 2907, 3270
BcgI CGANNNNNNTGC 4 cut(s) 435, 445, 469, 479
BclI TGATCA 1 cut(s) 2785
BcnI CCSGG 2 cut(s) 257, 2980
BcoDI GTCTC 5 cut(s) 128, 769, 1320, 1438, 2484
BcuI ACTAGT 1 cut(s) 1726
BfaI CTAG 7 cut(s) 1727, 2036, 2487, 2613, 3389, 3506, 3555
BfmI CTRYAG 4 cut(s) 621, 879, 1014, 1584
BfoI RGCGCY 1 cut(s) 3634
BfrI CTTAAG 1 cut(s) 3271
BfuAI ACCTGC 1 cut(s) 1765
BlpI GCTNAGC 1 cut(s) 2349
BmcAI AGTACT 2 cut(s) 304, 2253
Bme18I GGWCC 8 cut(s) 416, 608, 1466, 1631, 2113, 2321, 2975, 3764
BmeRI GACNNNNNGTC 1 cut(s) 2216
BmeT110I CYCGRG 2 cut(s) 922, 1057
BmrI ACTGGG 3 cut(s) 962, 1097, 3729
BmtI GCTAGC 1 cut(s) 2039
BmuI ACTGGG 3 cut(s) 962, 1097, 3729
BpiI GAAGAC 2 cut(s) 707, 2751
BpmI CTGGAG 9 cut(s) 11, 423, 558, 858, 993, 1048, 1752, 3180, 3837
Bpu10I CCTNAGC 1 cut(s) 1994
Bpu1102I GCTNAGC 1 cut(s) 2349
BpuEI CTTGAG 3 cut(s) 1401, 3284, 3739
BpuMI CCSGG 2 cut(s) 257, 2980
BsaAI YACGTR 1 cut(s) 3167
BsaBI GATNNNNATC 2 cut(s) 813, 3384
BsaWI WCCGGW 2 cut(s) 80, 3744
BsaXI ACNNNNNCTCC 2 cut(s) 3810, 3840
Bsc4I CCNNNNNNNGG 8 cut(s) 271, 1947, 2238, 2330, 2379, 2540, 2893, 3479
Bse21I CCTNAGG 2 cut(s) 903, 1383
Bse3DI GCAATG 5 cut(s) 184, 240, 2442, 2616, 3213
Bse8I GATNNNNATC 2 cut(s) 813, 3384
BseAI TCCGGA 1 cut(s) 3744
BseGI GGATG 5 cut(s) 287, 2228, 2429, 2988, 3145
BseJI GATNNNNATC 2 cut(s) 813, 3384
BseLI CCNNNNNNNGG 8 cut(s) 271, 1947, 2238, 2330, 2379, 2540, 2893, 3479
BseMI GCAATG 5 cut(s) 184, 240, 2442, 2616, 3213
BseMII CTCAG 5 cut(s) 438, 536, 894, 2842, 3797
BseRI GAGGAG 5 cut(s) 327, 771, 1674, 2277, 2392
BseSI GKGCMC 3 cut(s) 264, 2373, 3337
BseYI CCCAGC 6 cut(s) 190, 1144, 1193, 1276, 1325, 1411
BshFI GGCC 5 cut(s) 147, 1002, 3335, 3497, 3663
BshNI GGYRCC 2 cut(s) 259, 283
BsiHKAI GWGCWC 5 cut(s) 929, 1064, 2886, 2907, 3270
BsiHKCI CYCGRG 2 cut(s) 922, 1057
BsiSI CCGG 4 cut(s) 81, 257, 2980, 3745
BslFI GGGAC 5 cut(s) 1148, 1466, 2255, 2961, 3750
BslI CCNNNNNNNGG 8 cut(s) 271, 1947, 2238, 2330, 2379, 2540, 2893, 3479
BsmAI GTCTC 5 cut(s) 128, 769, 1320, 1438, 2484
BsmBI CGTCTC 1 cut(s) 1320
BsmFI GGGAC 5 cut(s) 1148, 1466, 2255, 2961, 3750
BsmI GAATGC 1 cut(s) 1329
BsnI GGCC 5 cut(s) 147, 1002, 3335, 3497, 3663
BsoBI CYCGRG 2 cut(s) 922, 1057
Bsp120I GGGCCC 1 cut(s) 3333
Bsp1286I GDGCHC 8 cut(s) 264, 929, 1064, 2373, 2886, 2907, 3270, 3337
Bsp13I TCCGGA 1 cut(s) 3744
Bsp1407I TGTACA 2 cut(s) 352, 3699
Bsp1720I GCTNAGC 1 cut(s) 2349
Bsp19I CCATGG 2 cut(s) 996, 1263
BspACI CCGC 3 cut(s) 341, 377, 2887
BspANI GGCC 5 cut(s) 147, 1002, 3335, 3497, 3663
BspCNI CTCAG 5 cut(s) 437, 535, 895, 2841, 3798
BspEI TCCGGA 1 cut(s) 3744
BspMI ACCTGC 1 cut(s) 1765
BspOI GCTAGC 1 cut(s) 2039
BspPI GGATC 8 cut(s) 82, 749, 1792, 1919, 2617, 2641, 2681, 3400
BspQI GCTCTTC 1 cut(s) 2874
BspT107I GGYRCC 2 cut(s) 259, 283
BspTI CTTAAG 1 cut(s) 3271
BsrDI GCAATG 5 cut(s) 184, 240, 2442, 2616, 3213
BsrGI TGTACA 2 cut(s) 352, 3699
BssSI CACGAG 2 cut(s) 3006, 3026
BssT1I CCWWGG 6 cut(s) 70, 996, 1263, 2022, 2754, 3768
Bst2BI CACGAG 2 cut(s) 3006, 3026
Bst6I CTCTTC 2 cut(s) 156, 2874
BstAFI CTTAAG 1 cut(s) 3271
BstAPI GCANNNNNTGC 2 cut(s) 2999, 3131
BstAUI TGTACA 2 cut(s) 352, 3699
BstBAI YACGTR 1 cut(s) 3167
BstC8I GCNNGC 5 cut(s) 18, 231, 1744, 2037, 3595
BstDSI CCRYGG 4 cut(s) 596, 996, 1263, 2519
BstEII GGTNACC 1 cut(s) 1950
BstF5I GGATG 5 cut(s) 287, 2228, 2429, 2988, 3145
BstH2I RGCGCY 1 cut(s) 3634
BstHHI GCGC 4 cut(s) 229, 1992, 2265, 3633
BstMAI GTCTC 5 cut(s) 128, 769, 1320, 1438, 2484
BstNSI RCATGY 1 cut(s) 3298
BstPI GGTNACC 1 cut(s) 1950
BstSFI CTRYAG 4 cut(s) 621, 879, 1014, 1584
BstSLI GKGCMC 3 cut(s) 264, 2373, 3337
BstV2I GAAGAC 2 cut(s) 707, 2751
BstX2I RGATCY 6 cut(s) 74, 1784, 1924, 2609, 2633, 3392
BstXI CCANNNNNNTGG 3 cut(s) 1174, 2970, 3580
BstYI RGATCY 6 cut(s) 74, 1784, 1924, 2609, 2633, 3392
Bsu36I CCTNAGG 2 cut(s) 903, 1383
BsuRI GGCC 5 cut(s) 147, 1002, 3335, 3497, 3663
BtgI CCRYGG 4 cut(s) 596, 996, 1263, 2519
BtgZI GCGATG 1 cut(s) 1509
BtsCI GGATG 5 cut(s) 287, 2228, 2429, 2988, 3145
BtsI GCAGTG 5 cut(s) 590, 2058, 2926, 3341, 3829
BveI ACCTGC 1 cut(s) 1765
Cac8I GCNNGC 5 cut(s) 18, 231, 1744, 2037, 3595
CaiI CAGNNNCTG 6 cut(s) 143, 1484, 2303, 2558, 2636, 3805
CfoI GCGC 4 cut(s) 229, 1992, 2265, 3633
CseI GACGC 1 cut(s) 2309
CsiI ACCWGGT 1 cut(s) 3307
CspCI CAANNNNNGTGG 2 cut(s) 2508, 2543
DraIII CACNNNGTG 2 cut(s) 2999, 3311
DriI GACNNNNNGTC 1 cut(s) 2216
Eam1104I CTCTTC 2 cut(s) 156, 2874
Eam1105I GACNNNNNGTC 1 cut(s) 2216
EarI CTCTTC 2 cut(s) 156, 2874
EciI GGCGGA 1 cut(s) 330
Ecl136II GAGCTC 4 cut(s) 927, 1062, 2905, 3268
Eco130I CCWWGG 6 cut(s) 70, 996, 1263, 2022, 2754, 3768
Eco147I AGGCCT 2 cut(s) 3497, 3663
Eco24I GRGCYC 5 cut(s) 929, 1064, 2907, 3270, 3337
Eco32I GATATC 1 cut(s) 330
Eco47I GGWCC 8 cut(s) 416, 608, 1466, 1631, 2113, 2321, 2975, 3764
Eco53kI GAGCTC 4 cut(s) 927, 1062, 2905, 3268
Eco57I CTGAAG 4 cut(s) 780, 1170, 2280, 2835
Eco72I CACGTG 1 cut(s) 3167
Eco81I CCTNAGG 2 cut(s) 903, 1383
Eco88I CYCGRG 2 cut(s) 922, 1057
Eco91I GGTNACC 1 cut(s) 1950
EcoICRI GAGCTC 4 cut(s) 927, 1062, 2905, 3268
EcoO109I RGGNCCY 3 cut(s) 2113, 2975, 3764
EcoO65I GGTNACC 1 cut(s) 1950
EcoRV GATATC 1 cut(s) 330
EcoT14I CCWWGG 6 cut(s) 70, 996, 1263, 2022, 2754, 3768
EcoT22I ATGCAT 1 cut(s) 1876
EcoT38I GRGCYC 5 cut(s) 929, 1064, 2907, 3270, 3337
ErhI CCWWGG 6 cut(s) 70, 996, 1263, 2022, 2754, 3768
Esp3I CGTCTC 1 cut(s) 1320
FaqI GGGAC 5 cut(s) 1148, 1466, 2255, 2961, 3750
FauNDI CATATG 3 cut(s) 1240, 1372, 2870
FbaI TGATCA 1 cut(s) 2785
FblI GTMKAC 2 cut(s) 894, 3291
FokI GGATG 5 cut(s) 274, 2215, 2416, 2995, 3152
FriOI GRGCYC 5 cut(s) 929, 1064, 2907, 3270, 3337
FspBI CTAG 7 cut(s) 1727, 2036, 2487, 2613, 3389, 3506, 3555
GlaI GCGC 4 cut(s) 228, 1991, 2264, 3632
GsaI CCCAGC 6 cut(s) 194, 1148, 1197, 1280, 1329, 1415
GsuI CTGGAG 9 cut(s) 11, 423, 558, 858, 993, 1048, 1752, 3180, 3837
HaeII RGCGCY 1 cut(s) 3634
HaeIII GGCC 5 cut(s) 147, 1002, 3335, 3497, 3663
HapII CCGG 4 cut(s) 81, 257, 2980, 3745
HgaI GACGC 1 cut(s) 2309
HhaI GCGC 4 cut(s) 229, 1992, 2265, 3633
Hin6I GCGC 4 cut(s) 227, 1990, 2263, 3631
HinP1I GCGC 4 cut(s) 227, 1990, 2263, 3631
HincII GTYRAC 2 cut(s) 895, 1030
HindII GTYRAC 2 cut(s) 895, 1030
HindIII AAGCTT 1 cut(s) 3681
HpaII CCGG 4 cut(s) 81, 257, 2980, 3745
HpyCH4IV ACGT 2 cut(s) 3166, 3707
HpySE526I ACGT 2 cut(s) 3166, 3707
HspAI GCGC 4 cut(s) 227, 1990, 2263, 3631
KflI GGGWCCC 1 cut(s) 2975
Kpn2I TCCGGA 1 cut(s) 3744
KpnI GGTACC 1 cut(s) 287
Ksp22I TGATCA 1 cut(s) 2785
LguI GCTCTTC 1 cut(s) 2874
MabI ACCWGGT 1 cut(s) 3307
MaeI CTAG 7 cut(s) 1727, 2036, 2487, 2613, 3389, 3506, 3555
MaeII ACGT 2 cut(s) 3166, 3707
MaeIII GTNAC 7 cut(s) 99, 195, 721, 1729, 1950, 2657, 3297
MfeI CAATTG 1 cut(s) 931
MflI RGATCY 6 cut(s) 74, 1784, 1924, 2609, 2633, 3392
MhlI GDGCHC 8 cut(s) 264, 929, 1064, 2373, 2886, 2907, 3270, 3337
MluCI AATT 8 cut(s) 487, 504, 931, 1653, 2046, 2409, 2680, 2943
MlyI GAGTC 1 cut(s) 3746
MmeI TCCRAC 4 cut(s) 332, 764, 1963, 3345
Mph1103I ATGCAT 1 cut(s) 1876
MroI TCCGGA 1 cut(s) 3744
MseI TTAA 7 cut(s) 36, 408, 1200, 1776, 2312, 3272, 3500
MslI CAYNNNNRTG 3 cut(s) 2388, 2937, 3578
MspA1I CMGCKG 4 cut(s) 31, 956, 1148, 2889
MspCI CTTAAG 1 cut(s) 3271
MspI CCGG 4 cut(s) 81, 257, 2980, 3745
MunI CAATTG 1 cut(s) 931
Mva1269I GAATGC 1 cut(s) 1329
NciI CCSGG 2 cut(s) 257, 2980
NcoI CCATGG 2 cut(s) 996, 1263
NdeI CATATG 3 cut(s) 1240, 1372, 2870
NheI GCTAGC 1 cut(s) 2035
NmeAIII GCCGAG 1 cut(s) 3584
NmuCI GTSAC 5 cut(s) 99, 1729, 1950, 2657, 3297
NsiI ATGCAT 1 cut(s) 1876
NspI RCATGY 1 cut(s) 3298
PaqCI CACCTGC 1 cut(s) 1765
PasI CCCWGGG 1 cut(s) 2152
PceI AGGCCT 2 cut(s) 3497, 3663
PciI ACATGT 1 cut(s) 3294
PciSI GCTCTTC 1 cut(s) 2874
PctI GAATGC 1 cut(s) 1329
PflMI CCANNNNNTGG 1 cut(s) 2330
PfoI TCCNGGA 1 cut(s) 1462
PleI GAGTC 1 cut(s) 3745
PmaCI CACGTG 1 cut(s) 3167
PmlI CACGTG 1 cut(s) 3167
PpsI GAGTC 1 cut(s) 3745
Ppu21I YACGTR 1 cut(s) 3167
PpuMI RGGWCCY 3 cut(s) 2113, 2975, 3764
PscI ACATGT 1 cut(s) 3294
Psp124BI GAGCTC 4 cut(s) 929, 1064, 2907, 3270
Psp5II RGGWCCY 3 cut(s) 2113, 2975, 3764
PspCI CACGTG 1 cut(s) 3167
PspEI GGTNACC 1 cut(s) 1950
PspFI CCCAGC 6 cut(s) 190, 1144, 1193, 1276, 1325, 1411
PspOMI GGGCCC 1 cut(s) 3333
PspPPI RGGWCCY 3 cut(s) 2113, 2975, 3764
PsrI GAACNNNNNNTAC 4 cut(s) 534, 566, 2572, 2604
PstNI CAGNNNCTG 6 cut(s) 143, 1484, 2303, 2558, 2636, 3805
PsuI RGATCY 6 cut(s) 74, 1784, 1924, 2609, 2633, 3392
PvuII CAGCTG 3 cut(s) 31, 956, 1148
RseI CAYNNNNRTG 3 cut(s) 2388, 2937, 3578
SacI GAGCTC 4 cut(s) 929, 1064, 2907, 3270
SalI GTCGAC 1 cut(s) 893
SapI GCTCTTC 1 cut(s) 2874
SaqAI TTAA 7 cut(s) 36, 408, 1200, 1776, 2312, 3272, 3500
ScaI AGTACT 2 cut(s) 304, 2253
SchI GAGTC 1 cut(s) 3746
SduI GDGCHC 8 cut(s) 264, 929, 1064, 2373, 2886, 2907, 3270, 3337
SexAI ACCWGGT 1 cut(s) 3307
SfcI CTRYAG 4 cut(s) 621, 879, 1014, 1584
SinI GGWCC 8 cut(s) 416, 608, 1466, 1631, 2113, 2321, 2975, 3764
SmiMI CAYNNNNRTG 3 cut(s) 2388, 2937, 3578
SmlI CTYRAG 4 cut(s) 1416, 3263, 3271, 3754
SmoI CTYRAG 4 cut(s) 1416, 3263, 3271, 3754
SpeI ACTAGT 1 cut(s) 1726
Sse9I AATT 8 cut(s) 487, 504, 931, 1653, 2046, 2409, 2680, 2943
SseBI AGGCCT 2 cut(s) 3497, 3663
SsiI CCGC 3 cut(s) 341, 377, 2887
SspI AATATT 2 cut(s) 3076, 3638
SspMI CTAG 7 cut(s) 1727, 2036, 2487, 2613, 3389, 3506, 3555
SstI GAGCTC 4 cut(s) 929, 1064, 2907, 3270
StuI AGGCCT 2 cut(s) 3497, 3663
StyI CCWWGG 6 cut(s) 70, 996, 1263, 2022, 2754, 3768
TaiI ACGT 2 cut(s) 3169, 3710
TaqI TCGA 3 cut(s) 455, 894, 2845
TaqII GACCGA 1 cut(s) 625
TasI AATT 8 cut(s) 487, 504, 931, 1653, 2046, 2409, 2680, 2943
TatI WGTACW 4 cut(s) 302, 352, 2251, 3699
TauI GCSGC 1 cut(s) 379
Tru1I TTAA 7 cut(s) 36, 408, 1200, 1776, 2312, 3272, 3500
Tru9I TTAA 7 cut(s) 36, 408, 1200, 1776, 2312, 3272, 3500
TseFI GTSAC 5 cut(s) 99, 1729, 1950, 2657, 3297
Tsp45I GTSAC 5 cut(s) 99, 1729, 1950, 2657, 3297
TspGWI ACGGA 3 cut(s) 2536, 2763, 3142
Van91I CCANNNNNTGG 1 cut(s) 2330
Vha464I CTTAAG 1 cut(s) 3271
VpaK11BI GGWCC 8 cut(s) 416, 608, 1466, 1631, 2113, 2321, 2975, 3764
XapI RAATTY 1 cut(s) 504
XceI RCATGY 1 cut(s) 3298
XcmI CCANNNNNNNNNTGG 1 cut(s) 806
XmiI GTMKAC 2 cut(s) 894, 3291
XspI CTAG 7 cut(s) 1727, 2036, 2487, 2613, 3389, 3506, 3555
ZrmI AGTACT 2 cut(s) 304, 2253
Zsp2I ATGCAT 1 cut(s) 1876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.