MD15G1207500.v1.1

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
16488073 .. 16495360
7288 bp
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UTR
Exon/CDS
Intron
MD15G1207500.v1.1.491

Sequence Viewer

Length: 3819 bp
ATGATGCCAGCCATTCTCCAGCTGGTGAATCTCTGTGTCATTGGCTTTGCTTTTGCTCTCCAAGGATCTGCAGGGTTAAATATATCACCATCACCAGAACCTCTCTCTATGAATCCTCCTGTTGAAACAGCTCCCCCTCCTTTTCCCGACAGAAAGCCATTCACAAGTAATGTACCAATCCCCGGTTTACAGCCAAATGGGTCCAATTTGCACCCGTCACCCACAATGCCACCTCTTATGTCCACCCCACTGCCTCCAAATAATGCTCCTCCACCACTAAGCATTGAAGTTCATGTACCGTCCGCGCTACCAAATAATGCCCCTCCATCACCAACTGTTGGAGGTCAAGTACCACCTATGACACCAAATAATGCTCCACCACCACTAAGTATTGAAGTTCATACACCGTCTGCCCTACCCAATAATGCTCCCTCACCACCAAGTGTTGAAGGTCATGCACCATCTATGCCACCAACTAATTCTCCTCCACCACCAAGTGTTGAAGATCATGCACCGCCTATGCTACCAAATAATGCTCCTCCTCCTCCAAGTGTTGAAGGTCATGTACCGTCTATGCCACCAACTAATGCTCCTCCACCACCGAGTGTTGAAGGTCATGTACAGCCTATGCCACCAAATAATGCTCCTCCACCACTAAGCATTGAAGTTCAGGTGCCGTCTGCACCACCAAATGATGCTCCTCCACCACCAAGTGTTAAAGGTCATGTACCATCTACACCACCAAATAATGCTCCTCCACCACCAAGTGCTGAAGGCCATGTATGGCCTACGCCACCAAATAATGCTCCTCCACCATTAAGTATTGGAGTTCATGTGCCCTCTGCACCACCAAATAATGCTCCTCCACCACCAAGTGTTAAAGATCAGGTACCATCTACGCCACCAACTAATGCCCCACCACCACCAAGTGTTGAAGGTCATGTACCGTCTACGCCACCGACTGTTCCTCAAACAAAGCCAGCGATCAATAAGAGTCCTAGCTCAGTGCCATTTGCTCCAGTCCCTGTTGAAACACCTTTGAGGAATTTGCCTCAAATTTCACCGGCCATCCATGCAAGCACACCAGAAACTTCGCCATTTGCTCATCAAAGACATGTGCCAAACAATAAGGTTCCCATACCACAGCCAATTGCTCCAGCACCTATTTCATCCCTGCCAAGGACATTGGGACCAAATCCACCTATAGTCCATCCGATCACACCGAATGTACCTCCACCTATATTACCTGCACCAGTTGCATCACCAACTAGCAATTTGCGACAAAACCCGCCATCCGTTCACCCAGTTACACCTGGAGAATCACCATCCACTTTTCCTGATCCTCCTGTATCATCTACTCCACCCAGCATCAACGGGAAAAGGGGTCGTTTTCCAGTTGTTGCACCACCATATGAAGCTCCCAAGCCATCACTACCTGTGGACCGCACCCCAGCTGAAGCTCCATCTGTCCACAAACCTGTGGTATCATCTCGTCCCCCGGTTGGACCAGCATATGAAGCTCCCAGGCCGTCACTGCCCAAGGTCCATACTCCAGCCGAAGGTCCAGTGATGCCACCGGTATCATTTCGAACAGGCAGGCGAAGACACTATGCTCCTCCACCCCTAAATCCAGCGTCTTCGGTTCCTCCATCCCATTTACCTGAAGCTCCGTCAGTGACCCATGTTTCGCCTGCTCCTTCTCCATCTTTAGAAGGCTCTACTCACGAAACCAAATTGCACCCTAAGATTTCTCCATCTGGGTCTTTGGCAAAGAGCCCAAAAGCGCCACCACCGCTGCCACTAGTATTCCCACCGCCACCTCCCAATCAAGATTGTTCATCAACTATTTGCACCAATCCATATACAAATACCCCTCCTGGGTCACCTTGTGGCTGTGTCTTGCCTCTGCAAGTTGGACTGCGACTTAGTGTTGCACTGTATACGTTCTTCCCCTTGGTTTCAGAGCTAGCCCAGGAAATTGCTGTCGGGGTTTTTATGCAACAAAGTCAGGTCCGCATTATTGGAGCCAATGCAGCTACCCAGCAACCAGACAAGACAGTTGCCCTCATTGACTTGGTTCCCCTTGGGGAAAAGTTTGATAACACCACAGCTTTTTTGAATTCCCAGAGATTTTGGCATAAACAAGTTGTTATAAAAGCATCGTATTTTGGCGACTATGAAGTACTCTATGTGCGGTATCCAGGTTTACCCCCATCTCCACCTTCTTCGGATGCTGATGCAATGAATGCGGGGCCATATCCTGGTAATGACAATAATGGAAGGACAATGAAGCCCTTCGGGATTTACGTGCACAAGAGGAAGAATAAAAATGGGCTTAGTGGTGGGGTAATTGCTATTATTGCTTTGTCTACCTTTGTAGCAGTTGCTTTATGCTCTGCTGCTGCTTGGGTTTTTCTGTTCAAATCTAGAGACCGTGCTTCTCAACCAGCAGCAACTCCGCGGGCTTTGCTACCTTCTTCTGAAAAACCATCTGGTACTGCTGGGTCGATGATGGAAAGTAGGCACAGTTCCTTGTCGTTATCATTCGCATCCAGCATTGCACCATATACAGGATCTGCTAATACTTTCAGTGCAAGTGACATTGAGAGAGCCACTAACAATTATGACGATTCAAGAGTACTTGGGGAAGGTGGCTTTGGGCGTGTTTATAGTGGTGTTCTTGAAGACGGGACCAAGATTGCCGTCAAAGTTCTAAAAAGAGATGATCAGCAGGGTGGTCGGGAGTTTTTGGCTGAAGTAGAAATGCTTAGTCGTCTCCATCATCGAAACTTGGTCAAGTTGATTGGCATATGCACAGAAGAGCATAGCCGCTCCTTGGTTTATGAGCTCATTCCTAATGGCAGTGTGGAATCTCATTTGCATGGAATTGACAAGGACAGTGCTCCACTTAATTGGGTACAACGCATGAAAATAGCACTTGGTGCTGCTAGGGGGCTGGCATATCTACACGAGGATTCCAGCCCCCGTGTAATACACAGGGATTTCAAAGCCAGCAATATTTTGCTGGAAGATGATTTTACACCAAAAGTGTCCGACTTTGGTTTGGCGCGAACTGCCATGGATGAGGAAAACAGACATATATCAACACGGGTCATGGGAACTTTCGGGTATGTGGCTCCGGAATATGCAATGACTGGGCATCTTCTTGTCAAGAGTGATGTATACAGCTATGGCGTTGTCCTTCTTGAACTCTTAACTGGAAGAAAACCGGTAGACATGTCACAGCCACCTGGTGAAGAAAACCTAGTTGCATGGGCCCGGCCGCTTCTCACATGTAAGGAAGGGTTGGAAGCTATCATAGACCCACATCTAGGATCCGAGGTCCCATTTGAAAGTATTGCCAAAGTGGCAGCTATTGCTTCGATGTGTGTACAGCCTGAGGTATCACACCGCCCTTTTATGGGCGAGGTTGTCCAGGCATTAAAACTGGTATGCAATGAATTTGATGAGGCGAAAGAATTAGGTTCAAGGAGTTCTAGCCGAGACGATGTGTCCATTGATGTGGCTGATGACACAAATACTACCTCGGGACGGTTGGCAGATACTTTCCAAAACCGATATTCCATGCTGACCTATGATTCCGACCTTGAGACAGAGCGGGAAGCATCATTGTCGAGGATGCTCGGTACCTCAATGGGCACAGGGAGGTTAGATACCGAATCATTTAGGAGGCACTCCAGTTCAGGTCCTTGGGGAACAGGAAGGAGTAAGCAGTTATGGGAGAAACTGAGATCATCCGGGGGCAGTGTGAGCGAACATGGGTTTATGTTCAAATTATTTCAAGGCTCCCCCCATTGA

Protein Analysis

1273

Amino Acids

134.91

Weight (kDa)

6.6

Isoelectric Point (pI)

66.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALE2_N PF23180 618 - 737 2.3e-58 Receptor-like PK ALE2 N-terminal domain
Pkinase PF00069 875 - 1083 1.3e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 879 - 1148 5.2e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2153
Acc36I ACCTGC 1 cut(s) 1255
Acc65I GGTACC 2 cut(s) 889, 3647
AccB1I GGYRCC 3 cut(s) 673, 889, 3647
AccB7I CCANNNNNTGG 2 cut(s) 338, 2261
AccBSI CCGCTC 2 cut(s) 2832, 3619
AccI GTMKAC 5 cut(s) 950, 1940, 2369, 3183, 3234
AccII CGCG 3 cut(s) 305, 2461, 3070
AccIII TCCGGA 1 cut(s) 3139
AclWI GGATC 5 cut(s) 73, 1334, 2581, 3330, 3343
AcoI YGGCCR 2 cut(s) 1065, 3281
AcsI RAATTY 4 cut(s) 1045, 1056, 2119, 3461
AcuI CTGAAG 4 cut(s) 792, 1476, 1683, 2775
AflIII ACRYGT 3 cut(s) 1114, 3237, 3293
AgeI ACCGGT 2 cut(s) 1576, 3229
AhdI GACNNNNNGTC 1 cut(s) 3511
AhlI ACTAGT 1 cut(s) 1801
AjnI CCWGG 8 cut(s) 1312, 1523, 1876, 1971, 2200, 2260, 3250, 3435
AjuI GAANNNNNNNTTGG 2 cut(s) 2640, 2672
Alw21I GWGCWC 3 cut(s) 2313, 2850, 2905
Alw26I GTCTC 4 cut(s) 2424, 2780, 3498, 3605
Alw44I GTGCAC 1 cut(s) 2309
AlwI GGATC 5 cut(s) 73, 1334, 2581, 3330, 3343
AlwNI CAGNNNCTG 2 cut(s) 1025, 2576
Ama87I CYCGRG 1 cut(s) 3547
Aor13HI TCCGGA 1 cut(s) 3139
AoxI GGCC 7 cut(s) 775, 785, 1065, 1526, 2252, 3276, 3281
ApaI GGGCCC 1 cut(s) 3280
ApaLI GTGCAC 1 cut(s) 2309
ApeKI GCWGC 7 cut(s) 1795, 2033, 2399, 2402, 2450, 2945, 3371
ApoI RAATTY 4 cut(s) 1045, 1056, 2119, 3461
ArsI GACNNNNNNTTYG 2 cut(s) 1669, 1701
AsiGI ACCGGT 2 cut(s) 1576, 3229
Asp700I GAANNNNTTC 1 cut(s) 2294
Asp718I GGTACC 2 cut(s) 889, 3647
AspLEI GCGC 3 cut(s) 307, 1786, 3070
AsuC2I CCSGG 4 cut(s) 183, 1499, 3280, 3760
AsuII TTCGAA 1 cut(s) 1588
AsuNHI GCTAGC 1 cut(s) 1966
AvaI CYCGRG 1 cut(s) 3547
AxyI CCTNAGG 1 cut(s) 3399
BaeGI GKGCMC 4 cut(s) 840, 2313, 3280, 3662
BamHI GGATCC 1 cut(s) 3335
BanI GGYRCC 3 cut(s) 673, 889, 3647
BanII GRGCYC 3 cut(s) 1778, 2850, 3280
BauI CACGAG 1 cut(s) 2969
BbsI GAAGAC 3 cut(s) 1609, 1629, 2691
Bbv12I GWGCWC 3 cut(s) 2313, 2850, 2905
BbvI GCAGC 7 cut(s) 1782, 2045, 2386, 2389, 2462, 2932, 3383
BceAI ACGGC 3 cut(s) 661, 1513, 2687
BcgI CGANNNNNNTGC 4 cut(s) 2720, 2754, 3615, 3649
BciT130I CCWGG 8 cut(s) 1314, 1525, 1878, 1973, 2202, 2262, 3252, 3437
BciVI GTATCC 1 cut(s) 2208
BclI TGATCA 1 cut(s) 2725
BcnI CCSGG 4 cut(s) 183, 1499, 3280, 3760
BcoDI GTCTC 4 cut(s) 2424, 2780, 3498, 3605
BcuI ACTAGT 1 cut(s) 1801
BfaI CTAG 9 cut(s) 999, 1269, 1802, 1967, 2427, 2949, 3266, 3332, 3498
BfmI CTRYAG 2 cut(s) 69, 1203
BfoI RGCGCY 1 cut(s) 1787
BfuAI ACCTGC 1 cut(s) 1255
BfuI GTATCC 1 cut(s) 2208
BglI GCCNNNNNGGC 1 cut(s) 3368
BisI GCNGC 9 cut(s) 1796, 2034, 2400, 2403, 2451, 2830, 2946, 3284, 3372
BlsI GCNGC 9 cut(s) 1797, 2035, 2401, 2404, 2452, 2831, 2947, 3285, 3373
BmcAI AGTACT 2 cut(s) 2184, 2640
BmeRI GACNNNNNGTC 1 cut(s) 3511
BmeT110I CYCGRG 1 cut(s) 3547
BmrI ACTGGG 2 cut(s) 1298, 3165
BmtI GCTAGC 1 cut(s) 1970
BmuI ACTGGG 2 cut(s) 1298, 3165
BpiI GAAGAC 3 cut(s) 1609, 1629, 2691
BpmI CTGGAG 5 cut(s) 1002, 1140, 1335, 1536, 3682
Bpu14I TTCGAA 1 cut(s) 1588
BpuEI CTTGAG 1 cut(s) 3629
BpuMI CCSGG 4 cut(s) 183, 1499, 3280, 3760
BsaAI YACGTR 1 cut(s) 2308
BsaI GGTCTC 1 cut(s) 2424
BsaWI WCCGGW 3 cut(s) 1576, 3139, 3229
BsaXI ACNNNNNCTCC 8 cut(s) 333, 363, 466, 496, 574, 604, 819, 849
Bse118I RCCGGY 3 cut(s) 1063, 1576, 3229
Bse1I ACTGG 9 cut(s) 1019, 1253, 1304, 1394, 1565, 3160, 3223, 3453, 3699
Bse21I CCTNAGG 1 cut(s) 3399
Bse3DI GCAATG 4 cut(s) 2247, 2556, 3156, 3463
BseAI TCCGGA 1 cut(s) 3139
BseBI CCWGG 8 cut(s) 1314, 1525, 1878, 1973, 2202, 2262, 3252, 3437
BseMI GCAATG 4 cut(s) 2247, 2556, 3156, 3463
BseMII CTCAG 3 cut(s) 1017, 3390, 3740
BseNI ACTGG 9 cut(s) 1019, 1253, 1304, 1394, 1565, 3160, 3223, 3453, 3699
BseSI GKGCMC 4 cut(s) 840, 2313, 3280, 3662
BseX3I CGGCCG 1 cut(s) 3281
BseXI GCAGC 7 cut(s) 1782, 2045, 2386, 2389, 2462, 2932, 3383
BseYI CCCAGC 4 cut(s) 1364, 1450, 2040, 2501
BsgI GTGCAG 3 cut(s) 666, 828, 1233
Bsh1236I CGCG 3 cut(s) 305, 2461, 3070
Bsh1285I CGRYCG 1 cut(s) 3284
BshFI GGCC 7 cut(s) 777, 787, 1067, 1528, 2254, 3278, 3283
BshNI GGYRCC 3 cut(s) 673, 889, 3647
BshTI ACCGGT 2 cut(s) 1576, 3229
BsiEI CGRYCG 1 cut(s) 3284
BsiHKAI GWGCWC 3 cut(s) 2313, 2850, 2905
BsiHKCI CYCGRG 1 cut(s) 3547
BsiSI CCGG 8 cut(s) 183, 1064, 1499, 1577, 3140, 3230, 3280, 3759
BslFI GGGAC 6 cut(s) 1007, 1203, 1479, 2704, 3329, 3564
BsmAI GTCTC 4 cut(s) 2424, 2780, 3498, 3605
BsmBI CGTCTC 2 cut(s) 2780, 3498
BsmFI GGGAC 6 cut(s) 1007, 1203, 1479, 2704, 3329, 3564
BsmI GAATGC 1 cut(s) 2251
BsnI GGCC 7 cut(s) 777, 787, 1067, 1528, 2254, 3278, 3283
Bso31I GGTCTC 1 cut(s) 2424
BsoBI CYCGRG 1 cut(s) 3547
Bsp119I TTCGAA 1 cut(s) 1588
Bsp120I GGGCCC 1 cut(s) 3276
Bsp1286I GDGCHC 7 cut(s) 840, 1778, 2313, 2850, 2905, 3280, 3662
Bsp13I TCCGGA 1 cut(s) 3139
Bsp1407I TGTACA 2 cut(s) 619, 3391
Bsp19I CCATGG 1 cut(s) 3078
BspANI GGCC 7 cut(s) 777, 787, 1067, 1528, 2254, 3278, 3283
BspCNI CTCAG 3 cut(s) 1016, 3391, 3741
BspEI TCCGGA 1 cut(s) 3139
BspFNI CGCG 3 cut(s) 305, 2461, 3070
BspMAI CTGCAG 1 cut(s) 73
BspMI ACCTGC 1 cut(s) 1255
BspOI GCTAGC 1 cut(s) 1970
BspPI GGATC 5 cut(s) 73, 1334, 2581, 3330, 3343
BspQI GCTCTTC 1 cut(s) 2814
BspT104I TTCGAA 1 cut(s) 1588
BspT107I GGYRCC 3 cut(s) 673, 889, 3647
BspTNI GGTCTC 1 cut(s) 2424
BsrBI CCGCTC 2 cut(s) 2832, 3619
BsrDI GCAATG 4 cut(s) 2247, 2556, 3156, 3463
BsrFI RCCGGY 3 cut(s) 1063, 1576, 3229
BsrGI TGTACA 2 cut(s) 619, 3391
BsrI ACTGG 9 cut(s) 1019, 1253, 1304, 1394, 1565, 3160, 3223, 3453, 3699
BssAI RCCGGY 3 cut(s) 1063, 1576, 3229
BssNAI GTATAC 2 cut(s) 1941, 3184
BssSI CACGAG 1 cut(s) 2969
BssT1I CCWWGG 8 cut(s) 61, 1178, 1539, 1953, 2083, 2835, 3078, 3710
Bst1107I GTATAC 2 cut(s) 1941, 3184
Bst2BI CACGAG 1 cut(s) 2969
Bst2UI CCWGG 8 cut(s) 1314, 1525, 1878, 1973, 2202, 2262, 3252, 3437
Bst6I CTCTTC 1 cut(s) 2814
BstAPI GCANNNNNTGC 4 cut(s) 1256, 2246, 2942, 3377
BstAUI TGTACA 2 cut(s) 619, 3391
BstBAI YACGTR 1 cut(s) 2308
BstBI TTCGAA 1 cut(s) 1588
BstC8I GCNNGC 9 cut(s) 9, 981, 1078, 1598, 1692, 1968, 2463, 2958, 3013
BstDSI CCRYGG 2 cut(s) 2459, 3078
BstEII GGTNACC 1 cut(s) 1881
BstFNI CGCG 3 cut(s) 305, 2461, 3070
BstH2I RGCGCY 1 cut(s) 1787
BstHHI GCGC 3 cut(s) 307, 1786, 3070
BstMAI GTCTC 4 cut(s) 2424, 2780, 3498, 3605
BstMCI CGRYCG 1 cut(s) 3284
BstNI CCWGG 8 cut(s) 1314, 1525, 1878, 1973, 2202, 2262, 3252, 3437
BstNSI RCATGY 3 cut(s) 1118, 3241, 3297
BstPI GGTNACC 1 cut(s) 1881
BstSFI CTRYAG 2 cut(s) 69, 1203
BstSLI GKGCMC 4 cut(s) 840, 2313, 3280, 3662
BstUI CGCG 3 cut(s) 305, 2461, 3070
BstV1I GCAGC 7 cut(s) 1782, 2045, 2386, 2389, 2462, 2932, 3383
BstV2I GAAGAC 3 cut(s) 1609, 1629, 2691
BstX2I RGATCY 3 cut(s) 65, 2573, 3335
BstXI CCANNNNNNTGG 2 cut(s) 2913, 3523
BstYI RGATCY 3 cut(s) 65, 2573, 3335
BstZ17I GTATAC 2 cut(s) 1941, 3184
BstZI CGGCCG 1 cut(s) 3281
Bsu36I CCTNAGG 1 cut(s) 3399
BsuI GTATCC 1 cut(s) 2208
BsuRI GGCC 7 cut(s) 777, 787, 1067, 1528, 2254, 3278, 3283
BtgI CCRYGG 2 cut(s) 2459, 3078
BtsI GCAGTG 4 cut(s) 248, 1532, 2869, 3772
BveI ACCTGC 1 cut(s) 1255
Cac8I GCNNGC 9 cut(s) 9, 981, 1078, 1598, 1692, 1968, 2463, 2958, 3013
CaiI CAGNNNCTG 2 cut(s) 1025, 2576
CfoI GCGC 3 cut(s) 307, 1786, 3070
Cfr10I RCCGGY 3 cut(s) 1063, 1576, 3229
Cfr42I CCGCGG 1 cut(s) 2462
CseI GACGC 1 cut(s) 1623
CsiI ACCWGGT 1 cut(s) 3250
CspAI ACCGGT 2 cut(s) 1576, 3229
DriI GACNNNNNGTC 1 cut(s) 3511
EaeI YGGCCR 2 cut(s) 1065, 3281
EagI CGGCCG 1 cut(s) 3281
Eam1104I CTCTTC 1 cut(s) 2814
Eam1105I GACNNNNNGTC 1 cut(s) 3511
EarI CTCTTC 1 cut(s) 2814
Ecl136II GAGCTC 1 cut(s) 2848
EclXI CGGCCG 1 cut(s) 3281
Eco130I CCWWGG 8 cut(s) 61, 1178, 1539, 1953, 2083, 2835, 3078, 3710
Eco24I GRGCYC 3 cut(s) 1778, 2850, 3280
Eco31I GGTCTC 1 cut(s) 2424
Eco52I CGGCCG 1 cut(s) 3281
Eco53kI GAGCTC 1 cut(s) 2848
Eco57I CTGAAG 4 cut(s) 792, 1476, 1683, 2775
Eco81I CCTNAGG 1 cut(s) 3399
Eco88I CYCGRG 1 cut(s) 3547
Eco91I GGTNACC 1 cut(s) 1881
EcoICRI GAGCTC 1 cut(s) 2848
EcoO109I RGGNCCY 2 cut(s) 3343, 3707
EcoO65I GGTNACC 1 cut(s) 1881
EcoRI GAATTC 1 cut(s) 2119
EcoRII CCWGG 8 cut(s) 1312, 1523, 1876, 1971, 2200, 2260, 3250, 3435
EcoT14I CCWWGG 8 cut(s) 61, 1178, 1539, 1953, 2083, 2835, 3078, 3710
EcoT38I GRGCYC 3 cut(s) 1778, 2850, 3280
ErhI CCWWGG 8 cut(s) 61, 1178, 1539, 1953, 2083, 2835, 3078, 3710
Esp3I CGTCTC 2 cut(s) 2780, 3498
FaqI GGGAC 6 cut(s) 1007, 1203, 1479, 2704, 3329, 3564
FauI CCCGC 4 cut(s) 1296, 2242, 2454, 3612
FauNDI CATATG 3 cut(s) 1411, 1513, 2810
FbaI TGATCA 1 cut(s) 2725
FblI GTMKAC 5 cut(s) 950, 1940, 2369, 3183, 3234
Fnu4HI GCNGC 9 cut(s) 1796, 2034, 2400, 2403, 2451, 2830, 2946, 3284, 3372
FriOI GRGCYC 3 cut(s) 1778, 2850, 3280
Fsp4HI GCNGC 9 cut(s) 1796, 2034, 2400, 2403, 2451, 2830, 2946, 3284, 3372
FspBI CTAG 9 cut(s) 999, 1269, 1802, 1967, 2427, 2949, 3266, 3332, 3498
GlaI GCGC 3 cut(s) 306, 1785, 3069
GluI GCNGC 9 cut(s) 1796, 2034, 2400, 2403, 2451, 2830, 2946, 3284, 3372
GsaI CCCAGC 4 cut(s) 1368, 1454, 2044, 2505
GsuI CTGGAG 5 cut(s) 1002, 1140, 1335, 1536, 3682
HaeII RGCGCY 1 cut(s) 1787
HaeIII GGCC 7 cut(s) 777, 787, 1067, 1528, 2254, 3278, 3283
HapII CCGG 8 cut(s) 183, 1064, 1499, 1577, 3140, 3230, 3280, 3759
HgaI GACGC 1 cut(s) 1623
HhaI GCGC 3 cut(s) 307, 1786, 3070
Hin6I GCGC 3 cut(s) 305, 1784, 3068
HinP1I GCGC 3 cut(s) 305, 1784, 3068
HinfI GANTC 9 cut(s) 28, 112, 994, 1319, 2630, 2870, 2975, 3599, 3680
HpaII CCGG 8 cut(s) 183, 1064, 1499, 1577, 3140, 3230, 3280, 3759
Hpy188I TCNGA 7 cut(s) 1215, 1963, 2230, 2482, 3055, 3340, 3604
HpyCH4IV ACGT 2 cut(s) 1943, 2307
HpySE526I ACGT 2 cut(s) 1943, 2307
HspAI GCGC 3 cut(s) 305, 1784, 3068
Kpn2I TCCGGA 1 cut(s) 3139
KpnI GGTACC 2 cut(s) 893, 3651
Ksp22I TGATCA 1 cut(s) 2725
KspI CCGCGG 1 cut(s) 2462
LguI GCTCTTC 1 cut(s) 2814
Lsp1109I GCAGC 7 cut(s) 1782, 2045, 2386, 2389, 2462, 2932, 3383
MabI ACCWGGT 1 cut(s) 3250
MaeI CTAG 9 cut(s) 999, 1269, 1802, 1967, 2427, 2949, 3266, 3332, 3498
MaeII ACGT 2 cut(s) 1943, 2307
MaeIII GTNAC 7 cut(s) 216, 1306, 1530, 1675, 1881, 2597, 3240
MbiI CCGCTC 2 cut(s) 2832, 3619
MfeI CAATTG 1 cut(s) 1149
MflI RGATCY 3 cut(s) 65, 2573, 3335
MhlI GDGCHC 7 cut(s) 840, 1778, 2313, 2850, 2905, 3280, 3662
MlyI GAGTC 1 cut(s) 1003
MmeI TCCRAC 6 cut(s) 319, 1483, 1894, 3078, 3288, 3627
MroI TCCGGA 1 cut(s) 3139
MroXI GAANNNNTTC 1 cut(s) 2294
MseI TTAA 7 cut(s) 77, 717, 818, 879, 2910, 3215, 3443
MslI CAYNNNNRTG 2 cut(s) 2880, 3521
MspA1I CMGCKG 4 cut(s) 22, 1454, 1795, 2461
MspI CCGG 8 cut(s) 183, 1064, 1499, 1577, 3140, 3230, 3280, 3759
MunI CAATTG 1 cut(s) 1149
Mva1269I GAATGC 1 cut(s) 2251
MvaI CCWGG 8 cut(s) 1314, 1525, 1878, 1973, 2202, 2262, 3252, 3437
MvnI CGCG 3 cut(s) 305, 2461, 3070
NciI CCSGG 4 cut(s) 183, 1499, 3280, 3760
NcoI CCATGG 1 cut(s) 3078
NdeI CATATG 3 cut(s) 1411, 1513, 2810
NheI GCTAGC 1 cut(s) 1966
NmeAIII GCCGAG 1 cut(s) 3527
NmuCI GTSAC 6 cut(s) 216, 1530, 1675, 1881, 2597, 3240
NspI RCATGY 3 cut(s) 1118, 3241, 3297
NspV TTCGAA 1 cut(s) 1588
PciI ACATGT 3 cut(s) 1114, 3237, 3293
PciSI GCTCTTC 1 cut(s) 2814
PcsI WCGNNNNNNNCGW 1 cut(s) 2304
PctI GAATGC 1 cut(s) 2251
PdmI GAANNNNTTC 1 cut(s) 2294
PfeI GAWTC 8 cut(s) 28, 112, 1319, 2630, 2870, 2975, 3599, 3680
PflMI CCANNNNNTGG 2 cut(s) 338, 2261
PinAI ACCGGT 2 cut(s) 1576, 3229
PkrI GCNGC 9 cut(s) 1797, 2035, 2401, 2404, 2452, 2831, 2947, 3285, 3373
PleI GAGTC 1 cut(s) 1002
PpsI GAGTC 1 cut(s) 1002
Ppu21I YACGTR 1 cut(s) 2308
PpuMI RGGWCCY 2 cut(s) 3343, 3707
PscI ACATGT 3 cut(s) 1114, 3237, 3293
PsiI TTATAA 1 cut(s) 2153
Psp124BI GAGCTC 1 cut(s) 2850
Psp5II RGGWCCY 2 cut(s) 3343, 3707
Psp6I CCWGG 8 cut(s) 1312, 1523, 1876, 1971, 2200, 2260, 3250, 3435
PspEI GGTNACC 1 cut(s) 1881
PspFI CCCAGC 4 cut(s) 1364, 1450, 2040, 2501
PspGI CCWGG 8 cut(s) 1312, 1523, 1876, 1971, 2200, 2260, 3250, 3435
PspOMI GGGCCC 1 cut(s) 3276
PspPPI RGGWCCY 2 cut(s) 3343, 3707
PsrI GAACNNNNNNTAC 2 cut(s) 2512, 2544
PstI CTGCAG 1 cut(s) 73
PstNI CAGNNNCTG 2 cut(s) 1025, 2576
PsuI RGATCY 3 cut(s) 65, 2573, 3335
PvuII CAGCTG 2 cut(s) 22, 1454
RseI CAYNNNNRTG 2 cut(s) 2880, 3521
SacI GAGCTC 1 cut(s) 2850
SacII CCGCGG 1 cut(s) 2462
SapI GCTCTTC 1 cut(s) 2814
SaqAI TTAA 7 cut(s) 77, 717, 818, 879, 2910, 3215, 3443
SatI GCNGC 9 cut(s) 1796, 2034, 2400, 2403, 2451, 2830, 2946, 3284, 3372
ScaI AGTACT 2 cut(s) 2184, 2640
SchI GAGTC 1 cut(s) 1003
SduI GDGCHC 7 cut(s) 840, 1778, 2313, 2850, 2905, 3280, 3662
SexAI ACCWGGT 1 cut(s) 3250
SfcI CTRYAG 2 cut(s) 69, 1203
Sfr303I CCGCGG 1 cut(s) 2462
SfuI TTCGAA 1 cut(s) 1588
SgrBI CCGCGG 1 cut(s) 2462
SmiMI CAYNNNNRTG 2 cut(s) 2880, 3521
SmlI CTYRAG 1 cut(s) 3608
SmoI CTYRAG 1 cut(s) 3608
SpeI ACTAGT 1 cut(s) 1801
SspI AATATT 1 cut(s) 3019
SspMI CTAG 9 cut(s) 999, 1269, 1802, 1967, 2427, 2949, 3266, 3332, 3498
SstI GAGCTC 1 cut(s) 2850
StyI CCWWGG 8 cut(s) 61, 1178, 1539, 1953, 2083, 2835, 3078, 3710
TaiI ACGT 2 cut(s) 1946, 2310
TaqI TCGA 5 cut(s) 1588, 2507, 2785, 3383, 3635
TatI WGTACW 4 cut(s) 619, 2182, 2638, 3391
TauI GCSGC 2 cut(s) 2832, 3286
TfiI GAWTC 8 cut(s) 28, 112, 1319, 2630, 2870, 2975, 3599, 3680
Tru1I TTAA 7 cut(s) 77, 717, 818, 879, 2910, 3215, 3443
Tru9I TTAA 7 cut(s) 77, 717, 818, 879, 2910, 3215, 3443
TseFI GTSAC 6 cut(s) 216, 1530, 1675, 1881, 2597, 3240
TseI GCWGC 7 cut(s) 1795, 2033, 2399, 2402, 2450, 2945, 3371
Tsp45I GTSAC 6 cut(s) 216, 1530, 1675, 1881, 2597, 3240
TspGWI ACGGA 2 cut(s) 1285, 1659
Van91I CCANNNNNTGG 2 cut(s) 338, 2261
VneI GTGCAC 1 cut(s) 2309
XapI RAATTY 4 cut(s) 1045, 1056, 2119, 3461
XbaI TCTAGA 1 cut(s) 2426
XceI RCATGY 3 cut(s) 1118, 3241, 3297
XcmI CCANNNNNNNNNTGG 1 cut(s) 19
XmiI GTMKAC 5 cut(s) 950, 1940, 2369, 3183, 3234
XmnI GAANNNNTTC 1 cut(s) 2294
XspI CTAG 9 cut(s) 999, 1269, 1802, 1967, 2427, 2949, 3266, 3332, 3498
ZrmI AGTACT 2 cut(s) 2184, 2640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.