60S acidic ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25890 AT5G57290 AT5G57290 AT5G57290 |
| fragaria_vesca | FvH4_4g07630 |
| malus_domestica | MD13G1245200.v1.1 MD16G1253100.v1.1 |
| prunus_persica | Prupe.1G079500_v2.0.a1 |
| pyrus_communis | pycom13g21620 pycom16g21450 |
| rosa_chinensis | RchiOBHm_Chr1g0341131 RchiOBHm_Chr4g0400241 |
| rosa_laevigata | RLG00000009201 |
| rosa_multiflora | Rmu_sc0004338.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00032730 Rroxscaffold_5G00345200 |
| rosa_rugosa | Rorug04G0024100 Rorug04G0024100 |
| rosa_samantha | Rh4AG099100 Rh4BG097400 Rh4CG108700 Rh4DG094100 |
| rosa_wichuraiana | Rw4G008250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 6 cut(s) | 36, 48, 132, 147, 186, 282 |
| AcuI | CTGAAG | 2 cut(s) | 63, 342 |
| AgsI | TTSAA | 1 cut(s) | 74 |
| AluBI | AGCT | 4 cut(s) | 77, 83, 112, 251 |
| AluI | AGCT | 4 cut(s) | 77, 83, 112, 251 |
| Alw26I | GTCTC | 2 cut(s) | 178, 330 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 254 |
| ApeKI | GCWGC | 5 cut(s) | 233, 248, 251, 278, 284 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 329, 361 |
| AspLEI | GCGC | 1 cut(s) | 108 |
| AspS9I | GGNCC | 1 cut(s) | 45 |
| AsuHPI | GGTGA | 1 cut(s) | 284 |
| AvaII | GGWCC | 1 cut(s) | 45 |
| BbsI | GAAGAC | 2 cut(s) | 150, 184 |
| BbvI | GCAGC | 5 cut(s) | 220, 238, 260, 265, 296 |
| BceAI | ACGGC | 1 cut(s) | 173 |
| BcoDI | GTCTC | 2 cut(s) | 178, 330 |
| BglII | AGATCT | 1 cut(s) | 67 |
| BisI | GCNGC | 7 cut(s) | 148, 234, 249, 252, 279, 282, 285 |
| BlsI | GCNGC | 7 cut(s) | 149, 235, 250, 253, 280, 283, 286 |
| Bme18I | GGWCC | 1 cut(s) | 45 |
| BmgT120I | GGNCC | 1 cut(s) | 45 |
| BpiI | GAAGAC | 2 cut(s) | 150, 184 |
| BpmI | CTGGAG | 2 cut(s) | 86, 276 |
| BseRI | GAGGAG | 1 cut(s) | 255 |
| BseXI | GCAGC | 5 cut(s) | 220, 238, 260, 265, 296 |
| BsgI | GTGCAG | 1 cut(s) | 267 |
| BsiSI | CCGG | 1 cut(s) | 237 |
| BsmAI | GTCTC | 2 cut(s) | 178, 330 |
| Bsp143I | GATC | 3 cut(s) | 67, 97, 349 |
| BspACI | CCGC | 6 cut(s) | 36, 48, 132, 147, 186, 282 |
| BssMI | GATC | 3 cut(s) | 67, 97, 349 |
| Bst6I | CTCTTC | 3 cut(s) | 294, 318, 324 |
| BstC8I | GCNNGC | 1 cut(s) | 110 |
| BstHHI | GCGC | 1 cut(s) | 108 |
| BstKTI | GATC | 3 cut(s) | 70, 100, 352 |
| BstMAI | GTCTC | 2 cut(s) | 178, 330 |
| BstMBI | GATC | 3 cut(s) | 67, 97, 349 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 131, 284 |
| BstV1I | GCAGC | 5 cut(s) | 220, 238, 260, 265, 296 |
| BstV2I | GAAGAC | 2 cut(s) | 150, 184 |
| BstX2I | RGATCY | 1 cut(s) | 67 |
| BstYI | RGATCY | 1 cut(s) | 67 |
| Cac8I | GCNNGC | 1 cut(s) | 110 |
| CaiI | CAGNNNCTG | 1 cut(s) | 254 |
| CfoI | GCGC | 1 cut(s) | 108 |
| Cfr13I | GGNCC | 1 cut(s) | 45 |
| CviJI | RGCY | 6 cut(s) | 77, 83, 112, 251, 278, 287 |
| CviKI_1 | RGCY | 6 cut(s) | 77, 83, 112, 251, 278, 287 |
| DpnI | GATC | 3 cut(s) | 69, 99, 351 |
| DpnII | GATC | 3 cut(s) | 67, 97, 349 |
| Eam1104I | CTCTTC | 3 cut(s) | 294, 318, 324 |
| EarI | CTCTTC | 3 cut(s) | 294, 318, 324 |
| EciI | GGCGGA | 3 cut(s) | 51, 121, 175 |
| Eco47I | GGWCC | 1 cut(s) | 45 |
| Eco57I | CTGAAG | 2 cut(s) | 63, 342 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 54, 86 |
| Fnu4HI | GCNGC | 7 cut(s) | 148, 234, 249, 252, 279, 282, 285 |
| Fsp4HI | GCNGC | 7 cut(s) | 148, 234, 249, 252, 279, 282, 285 |
| GlaI | GCGC | 1 cut(s) | 107 |
| GluI | GCNGC | 7 cut(s) | 148, 234, 249, 252, 279, 282, 285 |
| GsuI | CTGGAG | 2 cut(s) | 86, 276 |
| HapII | CCGG | 1 cut(s) | 237 |
| HhaI | GCGC | 1 cut(s) | 108 |
| Hin6I | GCGC | 1 cut(s) | 106 |
| HinP1I | GCGC | 1 cut(s) | 106 |
| HindIII | AAGCTT | 2 cut(s) | 75, 110 |
| HinfI | GANTC | 2 cut(s) | 137, 317 |
| HpaII | CCGG | 1 cut(s) | 237 |
| HphI | GGTGA | 1 cut(s) | 284 |
| Hpy188I | TCNGA | 2 cut(s) | 120, 322 |
| Hpy188III | TCNNGA | 1 cut(s) | 71 |
| HpyAV | CCTTC | 2 cut(s) | 56, 304 |
| HpyCH4V | TGCA | 2 cut(s) | 24, 248 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 131, 284 |
| HspAI | GCGC | 1 cut(s) | 106 |
| Kzo9I | GATC | 3 cut(s) | 67, 97, 349 |
| LpnPI | CCDG | 4 cut(s) | 116, 129, 240, 250 |
| Lsp1109I | GCAGC | 5 cut(s) | 220, 238, 260, 265, 296 |
| MalI | GATC | 3 cut(s) | 69, 99, 351 |
| MboI | GATC | 3 cut(s) | 67, 97, 349 |
| MboII | GAAGA | 9 cut(s) | 78, 150, 184, 311, 316, 319, 326, 335, 341 |
| MflI | RGATCY | 1 cut(s) | 67 |
| MnlI | CCTC | 9 cut(s) | 193, 218, 233, 236, 251, 268, 289, 319, 325 |
| MseI | TTAA | 1 cut(s) | 361 |
| MslI | CAYNNNNRTG | 1 cut(s) | 19 |
| MspA1I | CMGCKG | 1 cut(s) | 251 |
| MspI | CCGG | 1 cut(s) | 237 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 131, 284 |
| NdeII | GATC | 3 cut(s) | 67, 97, 349 |
| PfeI | GAWTC | 2 cut(s) | 137, 317 |
| PkrI | GCNGC | 7 cut(s) | 149, 235, 250, 253, 280, 283, 286 |
| PspPI | GGNCC | 1 cut(s) | 45 |
| PstNI | CAGNNNCTG | 1 cut(s) | 254 |
| PsuI | RGATCY | 1 cut(s) | 67 |
| PvuII | CAGCTG | 1 cut(s) | 251 |
| RseI | CAYNNNNRTG | 1 cut(s) | 19 |
| SaqAI | TTAA | 1 cut(s) | 361 |
| SatI | GCNGC | 7 cut(s) | 148, 234, 249, 252, 279, 282, 285 |
| Sau3AI | GATC | 3 cut(s) | 67, 97, 349 |
| Sau96I | GGNCC | 1 cut(s) | 45 |
| SetI | ASST | 8 cut(s) | 79, 85, 95, 114, 185, 247, 253, 262 |
| SinI | GGWCC | 1 cut(s) | 45 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 19 |
| SsiI | CCGC | 6 cut(s) | 36, 48, 132, 147, 186, 282 |
| TauI | GCSGC | 2 cut(s) | 150, 284 |
| TfiI | GAWTC | 2 cut(s) | 137, 317 |
| Tru1I | TTAA | 1 cut(s) | 361 |
| Tru9I | TTAA | 1 cut(s) | 361 |
| TseI | GCWGC | 5 cut(s) | 233, 248, 251, 278, 284 |
| TspDTI | ATGAA | 1 cut(s) | 129 |
| VpaK11BI | GGWCC | 1 cut(s) | 45 |