60S acidic ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25890 AT5G57290 AT5G57290 AT5G57290 |
| fragaria_vesca | FvH4_4g07630 |
| malus_domestica | MD13G1245200.v1.1 MD16G1253100.v1.1 |
| prunus_persica | Prupe.1G079500_v2.0.a1 |
| pyrus_communis | pycom13g21620 pycom16g21450 |
| rosa_chinensis | RchiOBHm_Chr1g0341131 RchiOBHm_Chr4g0400241 |
| rosa_laevigata | RLG00000009201 |
| rosa_multiflora | Rmu_sc0004338.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00032730 Rroxscaffold_5G00345200 |
| rosa_rugosa | Rorug04G0024100 Rorug04G0024100 |
| rosa_samantha | Rh4AG099100 Rh4BG097400 Rh4CG108700 Rh4DG094100 |
| rosa_wichuraiana | Rw4G008250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 259 |
| AccII | CGCG | 1 cut(s) | 98 |
| AciI | CCGC | 2 cut(s) | 121, 244 |
| AcyI | GRCGYC | 1 cut(s) | 149 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 228, 269 |
| AgeI | ACCGGT | 1 cut(s) | 228 |
| AluBI | AGCT | 1 cut(s) | 157 |
| AluI | AGCT | 1 cut(s) | 157 |
| Alw21I | GWGCWC | 2 cut(s) | 85, 159 |
| Ama87I | CYCGRG | 2 cut(s) | 31, 141 |
| AsiGI | ACCGGT | 1 cut(s) | 228 |
| AspLEI | GCGC | 1 cut(s) | 100 |
| AspS9I | GGNCC | 1 cut(s) | 219 |
| AsuC2I | CCSGG | 3 cut(s) | 104, 194, 223 |
| AsuHPI | GGTGA | 2 cut(s) | 4, 209 |
| AvaI | CYCGRG | 2 cut(s) | 31, 141 |
| AvaII | GGWCC | 1 cut(s) | 219 |
| BanI | GGYRCC | 1 cut(s) | 259 |
| BanII | GRGCYC | 1 cut(s) | 159 |
| BbsI | GAAGAC | 1 cut(s) | 181 |
| Bbv12I | GWGCWC | 2 cut(s) | 85, 159 |
| BccI | CCATC | 1 cut(s) | 280 |
| BceAI | ACGGC | 1 cut(s) | 153 |
| BcnI | CCSGG | 3 cut(s) | 104, 194, 223 |
| BisI | GCNGC | 2 cut(s) | 121, 245 |
| BlsI | GCNGC | 2 cut(s) | 122, 246 |
| Bme1390I | CCNGG | 3 cut(s) | 104, 194, 223 |
| Bme18I | GGWCC | 1 cut(s) | 219 |
| BmeT110I | CYCGRG | 2 cut(s) | 31, 141 |
| BmgT120I | GGNCC | 1 cut(s) | 219 |
| BmiI | GGNNCC | 2 cut(s) | 227, 261 |
| BmrFI | CCNGG | 3 cut(s) | 104, 194, 223 |
| BmsI | GCATC | 1 cut(s) | 97 |
| BpiI | GAAGAC | 1 cut(s) | 181 |
| BpuEI | CTTGAG | 1 cut(s) | 92 |
| BpuMI | CCSGG | 3 cut(s) | 104, 194, 223 |
| BsaHI | GRCGYC | 1 cut(s) | 149 |
| BsaJI | CCNNGG | 1 cut(s) | 193 |
| BsaWI | WCCGGW | 1 cut(s) | 228 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 228, 269 |
| Bse118I | RCCGGY | 1 cut(s) | 228 |
| BseDI | CCNNGG | 1 cut(s) | 193 |
| BseGI | GGATG | 2 cut(s) | 112, 288 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 228, 269 |
| BseMII | CTCAG | 1 cut(s) | 198 |
| BseRI | GAGGAG | 2 cut(s) | 51, 229 |
| Bsh1236I | CGCG | 1 cut(s) | 98 |
| BshNI | GGYRCC | 1 cut(s) | 259 |
| BshTI | ACCGGT | 1 cut(s) | 228 |
| BsiHKAI | GWGCWC | 2 cut(s) | 85, 159 |
| BsiHKCI | CYCGRG | 2 cut(s) | 31, 141 |
| BsiSI | CCGG | 5 cut(s) | 103, 193, 222, 229, 241 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 228, 269 |
| BsoBI | CYCGRG | 2 cut(s) | 31, 141 |
| Bsp1286I | GDGCHC | 2 cut(s) | 85, 159 |
| BspACI | CCGC | 2 cut(s) | 121, 244 |
| BspCNI | CTCAG | 1 cut(s) | 197 |
| BspFNI | CGCG | 1 cut(s) | 98 |
| BspLI | GGNNCC | 2 cut(s) | 227, 261 |
| BspT107I | GGYRCC | 1 cut(s) | 259 |
| BsrFI | RCCGGY | 1 cut(s) | 228 |
| BssAI | RCCGGY | 1 cut(s) | 228 |
| BssECI | CCNNGG | 1 cut(s) | 193 |
| BssNI | GRCGYC | 1 cut(s) | 149 |
| BstACI | GRCGYC | 1 cut(s) | 149 |
| BstC8I | GCNNGC | 1 cut(s) | 302 |
| BstDEI | CTNAG | 1 cut(s) | 184 |
| BstF5I | GGATG | 2 cut(s) | 112, 288 |
| BstFNI | CGCG | 1 cut(s) | 98 |
| BstHHI | GCGC | 1 cut(s) | 100 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 146 |
| BstNSI | RCATGY | 1 cut(s) | 304 |
| BstSCI | CCNGG | 3 cut(s) | 102, 192, 221 |
| BstUI | CGCG | 1 cut(s) | 98 |
| BstV2I | GAAGAC | 1 cut(s) | 181 |
| BtsCI | GGATG | 2 cut(s) | 112, 288 |
| Cac8I | GCNNGC | 1 cut(s) | 302 |
| CfoI | GCGC | 1 cut(s) | 100 |
| Cfr10I | RCCGGY | 1 cut(s) | 228 |
| Cfr13I | GGNCC | 1 cut(s) | 219 |
| CseI | GACGC | 1 cut(s) | 138 |
| CspAI | ACCGGT | 1 cut(s) | 228 |
| CviAII | CATG | 1 cut(s) | 301 |
| CviJI | RGCY | 3 cut(s) | 77, 140, 157 |
| CviKI_1 | RGCY | 3 cut(s) | 77, 140, 157 |
| DdeI | CTNAG | 1 cut(s) | 184 |
| Ecl136II | GAGCTC | 1 cut(s) | 157 |
| Eco24I | GRGCYC | 1 cut(s) | 159 |
| Eco47I | GGWCC | 1 cut(s) | 219 |
| Eco53kI | GAGCTC | 1 cut(s) | 157 |
| Eco88I | CYCGRG | 2 cut(s) | 31, 141 |
| EcoICRI | GAGCTC | 1 cut(s) | 157 |
| EcoT38I | GRGCYC | 1 cut(s) | 159 |
| FaeI | CATG | 1 cut(s) | 304 |
| FaiI | YATR | 1 cut(s) | 302 |
| FatI | CATG | 1 cut(s) | 300 |
| Fnu4HI | GCNGC | 2 cut(s) | 121, 245 |
| FokI | GGATG | 2 cut(s) | 119, 295 |
| FriOI | GRGCYC | 1 cut(s) | 159 |
| Fsp4HI | GCNGC | 2 cut(s) | 121, 245 |
| GlaI | GCGC | 1 cut(s) | 99 |
| GluI | GCNGC | 2 cut(s) | 121, 245 |
| HapII | CCGG | 5 cut(s) | 103, 193, 222, 229, 241 |
| HgaI | GACGC | 1 cut(s) | 138 |
| HhaI | GCGC | 1 cut(s) | 100 |
| Hin1I | GRCGYC | 1 cut(s) | 149 |
| Hin1II | CATG | 1 cut(s) | 304 |
| Hin6I | GCGC | 1 cut(s) | 98 |
| HinP1I | GCGC | 1 cut(s) | 98 |
| HpaII | CCGG | 5 cut(s) | 103, 193, 222, 229, 241 |
| HphI | GGTGA | 2 cut(s) | 4, 209 |
| Hpy188I | TCNGA | 1 cut(s) | 154 |
| Hpy188III | TCNNGA | 2 cut(s) | 25, 33 |
| Hpy99I | CGWCG | 2 cut(s) | 23, 139 |
| HpyAV | CCTTC | 4 cut(s) | 25, 96, 187, 263 |
| HpyCH4V | TGCA | 2 cut(s) | 278, 300 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 146 |
| HpyF3I | CTNAG | 1 cut(s) | 184 |
| Hsp92I | GRCGYC | 1 cut(s) | 149 |
| Hsp92II | CATG | 1 cut(s) | 304 |
| HspAI | GCGC | 1 cut(s) | 98 |
| LmnI | GCTCC | 4 cut(s) | 45, 88, 105, 162 |
| LpnPI | CCDG | 5 cut(s) | 116, 206, 235, 242, 254 |
| LweI | GCATC | 1 cut(s) | 97 |
| MaeIII | GTNAC | 1 cut(s) | 170 |
| MboII | GAAGA | 2 cut(s) | 81, 181 |
| MhlI | GDGCHC | 2 cut(s) | 85, 159 |
| MnlI | CCTC | 8 cut(s) | 29, 55, 67, 135, 191, 207, 210, 266 |
| MspI | CCGG | 5 cut(s) | 103, 193, 222, 229, 241 |
| MspR9I | CCNGG | 3 cut(s) | 104, 194, 223 |
| MvnI | CGCG | 1 cut(s) | 98 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 146 |
| NciI | CCSGG | 3 cut(s) | 104, 194, 223 |
| NlaIII | CATG | 1 cut(s) | 304 |
| NlaIV | GGNNCC | 2 cut(s) | 227, 261 |
| NmuCI | GTSAC | 1 cut(s) | 170 |
| NspI | RCATGY | 1 cut(s) | 304 |
| PaeI | GCATGC | 1 cut(s) | 304 |
| PfoI | TCCNGGA | 2 cut(s) | 102, 221 |
| PinAI | ACCGGT | 1 cut(s) | 228 |
| PkrI | GCNGC | 2 cut(s) | 122, 246 |
| Psp124BI | GAGCTC | 1 cut(s) | 159 |
| PspN4I | GGNNCC | 2 cut(s) | 227, 261 |
| PspPI | GGNCC | 1 cut(s) | 219 |
| SacI | GAGCTC | 1 cut(s) | 159 |
| SatI | GCNGC | 2 cut(s) | 121, 245 |
| Sau96I | GGNCC | 1 cut(s) | 219 |
| ScrFI | CCNGG | 3 cut(s) | 104, 194, 223 |
| SduI | GDGCHC | 2 cut(s) | 85, 159 |
| SetI | ASST | 5 cut(s) | 17, 72, 159, 221, 277 |
| SfaNI | GCATC | 1 cut(s) | 97 |
| SinI | GGWCC | 1 cut(s) | 219 |
| SmlI | CTYRAG | 1 cut(s) | 71 |
| SmoI | CTYRAG | 1 cut(s) | 71 |
| SphI | GCATGC | 1 cut(s) | 304 |
| SsiI | CCGC | 2 cut(s) | 121, 244 |
| SstI | GAGCTC | 1 cut(s) | 159 |
| StyD4I | CCNGG | 3 cut(s) | 102, 192, 221 |
| TaqI | TCGA | 1 cut(s) | 294 |
| TauI | GCSGC | 2 cut(s) | 123, 247 |
| TseFI | GTSAC | 1 cut(s) | 170 |
| Tsp45I | GTSAC | 1 cut(s) | 170 |
| TspGWI | ACGGA | 1 cut(s) | 105 |
| VpaK11BI | GGWCC | 1 cut(s) | 219 |
| XceI | RCATGY | 1 cut(s) | 304 |