AT5G59330

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
23931314 .. 23932071
758 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G59330.1

Sequence Viewer

Length: 264 bp
ATGGCTTTGGCTCTCAGGTTCTTCATATGCTTCGTTTTGACGGTGTGCATAGTTTCATCAGTAGATGCAGAAATCTCATGTGGCACAGTGGTAAGTAACTTGGCTCCATGTGCCAACTACCTTTCAAAAGGTGGTGTGGTACCGGATCTGTGTTGTGAAGGAGTTGAAAAGTTGAACGGTGTGGCTCAAACCATGCCGATGCCTACAGTCCATTGCAAAGGGCATTTCTGGTCTCAACCCAAGTCTAGCCTCTGGTCTTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

87

Amino Acids

9.28

Weight (kDa)

6.68

Isoelectric Point (pI)

37.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 139
AccB1I GGYRCC 1 cut(s) 139
AclWI GGATC 1 cut(s) 153
AfaI GTAC 1 cut(s) 141
AgsI TTSAA 3 cut(s) 126, 167, 175
Alw26I GTCTC 1 cut(s) 237
AlwI GGATC 1 cut(s) 153
Asp718I GGTACC 1 cut(s) 139
BanI GGYRCC 1 cut(s) 139
BbsI GAAGAC 1 cut(s) 249
BcoDI GTCTC 1 cut(s) 237
BfaI CTAG 1 cut(s) 246
BfmI CTRYAG 1 cut(s) 204
BmiI GGNNCC 2 cut(s) 105, 141
BmsI GCATC 2 cut(s) 55, 189
BpiI GAAGAC 1 cut(s) 249
BsaI GGTCTC 1 cut(s) 237
BsaWI WCCGGW 1 cut(s) 142
Bse3DI GCAATG 1 cut(s) 211
BseMI GCAATG 1 cut(s) 211
BseMII CTCAG 1 cut(s) 28
BshNI GGYRCC 1 cut(s) 139
BsiSI CCGG 1 cut(s) 143
BsmAI GTCTC 1 cut(s) 237
Bso31I GGTCTC 1 cut(s) 237
Bsp143I GATC 1 cut(s) 145
BspCNI CTCAG 1 cut(s) 27
BspLI GGNNCC 2 cut(s) 105, 141
BspPI GGATC 1 cut(s) 153
BspT107I GGYRCC 1 cut(s) 139
BspTNI GGTCTC 1 cut(s) 237
BsrDI GCAATG 1 cut(s) 211
BssMI GATC 1 cut(s) 145
Bst4CI ACNGT 4 cut(s) 43, 88, 179, 208
BstDEI CTNAG 1 cut(s) 14
BstKTI GATC 1 cut(s) 148
BstMAI GTCTC 1 cut(s) 237
BstMBI GATC 1 cut(s) 145
BstMWI GCNNNNNNNGC 1 cut(s) 110
BstSFI CTRYAG 1 cut(s) 204
BstV2I GAAGAC 1 cut(s) 249
BstX2I RGATCY 1 cut(s) 145
BstYI RGATCY 1 cut(s) 145
BtsIMutI CAGTG 1 cut(s) 93
Csp6I GTAC 1 cut(s) 140
CviAII CATG 3 cut(s) 78, 108, 193
CviJI RGCY 5 cut(s) 5, 11, 104, 185, 249
CviKI_1 RGCY 5 cut(s) 5, 11, 104, 185, 249
CviQI GTAC 1 cut(s) 140
DdeI CTNAG 1 cut(s) 14
DpnI GATC 1 cut(s) 147
DpnII GATC 1 cut(s) 145
Eco31I GGTCTC 1 cut(s) 237
FaeI CATG 3 cut(s) 81, 111, 196
FaiI YATR 6 cut(s) 26, 28, 50, 79, 109, 194
FatI CATG 3 cut(s) 77, 107, 192
FauNDI CATATG 1 cut(s) 26
FspBI CTAG 1 cut(s) 246
HapII CCGG 1 cut(s) 143
Hin1II CATG 3 cut(s) 81, 111, 196
HpaII CCGG 1 cut(s) 143
Hpy188III TCNNGA 1 cut(s) 261
HpyAV CCTTC 1 cut(s) 152
HpyCH4III ACNGT 4 cut(s) 43, 88, 179, 208
HpyCH4V TGCA 3 cut(s) 48, 68, 216
HpyF10VI GCNNNNNNNGC 1 cut(s) 110
HpyF3I CTNAG 1 cut(s) 14
Hsp92II CATG 3 cut(s) 81, 111, 196
KpnI GGTACC 1 cut(s) 143
Kzo9I GATC 1 cut(s) 145
LmnI GCTCC 1 cut(s) 109
LpnPI CCDG 3 cut(s) 156, 214, 238
LweI GCATC 2 cut(s) 55, 189
MaeI CTAG 1 cut(s) 246
MaeIII GTNAC 1 cut(s) 95
MalI GATC 1 cut(s) 147
MboI GATC 1 cut(s) 145
MboII GAAGA 2 cut(s) 13, 249
MflI RGATCY 1 cut(s) 145
MnlI CCTC 1 cut(s) 260
MslI CAYNNNNRTG 1 cut(s) 197
MspI CCGG 1 cut(s) 143
MwoI GCNNNNNNNGC 1 cut(s) 110
NdeI CATATG 1 cut(s) 26
NdeII GATC 1 cut(s) 145
NlaIII CATG 3 cut(s) 81, 111, 196
NlaIV GGNNCC 2 cut(s) 105, 141
PspN4I GGNNCC 2 cut(s) 105, 141
PsuI RGATCY 1 cut(s) 145
RsaI GTAC 1 cut(s) 141
RsaNI GTAC 1 cut(s) 140
RseI CAYNNNNRTG 1 cut(s) 197
Sau3AI GATC 1 cut(s) 145
SetI ASST 3 cut(s) 20, 123, 133
SfaNI GCATC 2 cut(s) 55, 189
SfcI CTRYAG 1 cut(s) 204
SgeI CNNG 9 cut(s) 28, 90, 112, 120, 155, 205, 241, 253, 258
SmiMI CAYNNNNRTG 1 cut(s) 197
SspMI CTAG 1 cut(s) 246
TaaI ACNGT 4 cut(s) 43, 88, 179, 208
TscAI CASTG 1 cut(s) 93
TspDTI ATGAA 2 cut(s) 13, 45
TspRI CASTG 1 cut(s) 93
XspI CTAG 1 cut(s) 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.