Prupe.3G183000_v2.0.a1

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
19867570 .. 19868457
888 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G183000.1

Sequence Viewer

Length: 357 bp
ATGAAGGGTGTCGTTATAGCTTTAGTGATGGTGGTGGTGGCGGCCATGTTGGTCTTGGTTAAACCGGGGCAGGCCACAGTCACTTGCCAACAAGTGGTGTCATCTGTCGCTCCCTGCATTCCATATCTCACCAGTGGCACTGGTAGCCCACCCACAGCGTGTTGCAATGGGGTTTCTGGTCTGAACCAGCTCGCTTCAACCACCAAAGACAGGCGTGCAGCCTGCCAATGCCTCAAGGACACCGCAGATCACTACCAAAACATTAAGGAAGACGTCGCAGCTGGTCTCCCCACTGCGTGTAAAGTCCAAATCAACGTTCCCATTTCTAGGAGTGTCAATTGCAACGATGTGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

119

Amino Acids

12.22

Weight (kDa)

8.47

Isoelectric Point (pI)

41.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 276
AccB7I CCANNNNNTGG 1 cut(s) 94
AciI CCGC 2 cut(s) 41, 243
AclI AACGTT 1 cut(s) 315
AcoI YGGCCR 1 cut(s) 42
AcyI GRCGYC 1 cut(s) 273
AdeI CACNNNGTG 2 cut(s) 159, 297
AfiI CCNNNNNNNGG 3 cut(s) 94, 210, 327
AgsI TTSAA 1 cut(s) 198
AjuI GAANNNNNNNTTGG 2 cut(s) 300, 332
AluBI AGCT 3 cut(s) 20, 190, 281
AluI AGCT 3 cut(s) 20, 190, 281
Alw26I GTCTC 1 cut(s) 290
AoxI GGCC 2 cut(s) 42, 72
ApeKI GCWGC 2 cut(s) 218, 278
AsuC2I CCSGG 1 cut(s) 66
AsuHPI GGTGA 1 cut(s) 121
BbsI GAAGAC 1 cut(s) 276
BbvI GCAGC 2 cut(s) 230, 290
BccI CCATC 1 cut(s) 22
BcnI CCSGG 1 cut(s) 66
BcoDI GTCTC 1 cut(s) 290
BfaI CTAG 1 cut(s) 327
BisI GCNGC 3 cut(s) 42, 219, 279
BlsI GCNGC 3 cut(s) 43, 220, 280
Bme1390I CCNGG 1 cut(s) 66
BmrFI CCNGG 1 cut(s) 66
BpiI GAAGAC 1 cut(s) 276
BpuEI CTTGAG 1 cut(s) 218
BpuMI CCSGG 1 cut(s) 66
BsaHI GRCGYC 1 cut(s) 273
BsaI GGTCTC 1 cut(s) 290
BsaJI CCNNGG 1 cut(s) 65
Bsc4I CCNNNNNNNGG 3 cut(s) 94, 210, 327
Bse1I ACTGG 2 cut(s) 132, 145
Bse3DI GCAATG 1 cut(s) 172
BseDI CCNNGG 1 cut(s) 65
BseLI CCNNNNNNNGG 3 cut(s) 94, 210, 327
BseMI GCAATG 1 cut(s) 172
BseNI ACTGG 2 cut(s) 132, 145
BseXI GCAGC 2 cut(s) 230, 290
BsgI GTGCAG 1 cut(s) 237
BshFI GGCC 2 cut(s) 44, 74
BsiSI CCGG 1 cut(s) 65
BslI CCNNNNNNNGG 3 cut(s) 94, 210, 327
BsmAI GTCTC 1 cut(s) 290
BsmI GAATGC 1 cut(s) 117
BsnI GGCC 2 cut(s) 44, 74
Bso31I GGTCTC 1 cut(s) 290
Bsp143I GATC 1 cut(s) 247
BspACI CCGC 2 cut(s) 41, 243
BspANI GGCC 2 cut(s) 44, 74
BspTNI GGTCTC 1 cut(s) 290
BsrDI GCAATG 1 cut(s) 172
BsrI ACTGG 2 cut(s) 132, 145
BssECI CCNNGG 1 cut(s) 65
BssMI GATC 1 cut(s) 247
BssNI GRCGYC 1 cut(s) 273
Bst4CI ACNGT 1 cut(s) 79
BstACI GRCGYC 1 cut(s) 273
BstC8I GCNNGC 4 cut(s) 72, 192, 216, 223
BstKTI GATC 1 cut(s) 250
BstMAI GTCTC 1 cut(s) 290
BstMBI GATC 1 cut(s) 247
BstMWI GCNNNNNNNGC 1 cut(s) 144
BstSCI CCNGG 1 cut(s) 64
BstV1I GCAGC 2 cut(s) 230, 290
BstV2I GAAGAC 1 cut(s) 276
BsuRI GGCC 2 cut(s) 44, 74
BtsI GCAGTG 1 cut(s) 291
BtsIMutI CAGTG 3 cut(s) 138, 139, 291
Cac8I GCNNGC 4 cut(s) 72, 192, 216, 223
CviAII CATG 1 cut(s) 46
CviJI RGCY 7 cut(s) 20, 44, 74, 147, 190, 221, 281
CviKI_1 RGCY 7 cut(s) 20, 44, 74, 147, 190, 221, 281
DpnI GATC 1 cut(s) 249
DpnII GATC 1 cut(s) 247
DraIII CACNNNGTG 2 cut(s) 159, 297
EaeI YGGCCR 1 cut(s) 42
Eco31I GGTCTC 1 cut(s) 290
FaeI CATG 1 cut(s) 49
FaiI YATR 3 cut(s) 17, 47, 124
FatI CATG 1 cut(s) 45
Fnu4HI GCNGC 3 cut(s) 42, 219, 279
Fsp4HI GCNGC 3 cut(s) 42, 219, 279
FspBI CTAG 1 cut(s) 327
GluI GCNGC 3 cut(s) 42, 219, 279
HaeIII GGCC 2 cut(s) 44, 74
HapII CCGG 1 cut(s) 65
Hin1I GRCGYC 1 cut(s) 273
Hin1II CATG 1 cut(s) 49
HpaII CCGG 1 cut(s) 65
HphI GGTGA 1 cut(s) 121
Hpy188I TCNGA 1 cut(s) 183
Hpy99I CGWCG 1 cut(s) 278
HpyCH4III ACNGT 1 cut(s) 79
HpyCH4IV ACGT 2 cut(s) 273, 315
HpyCH4V TGCA 5 cut(s) 117, 165, 218, 342, 352
HpyF10VI GCNNNNNNNGC 1 cut(s) 144
HpySE526I ACGT 2 cut(s) 273, 315
Hsp92I GRCGYC 1 cut(s) 273
Hsp92II CATG 1 cut(s) 49
Kzo9I GATC 1 cut(s) 247
LmnI GCTCC 1 cut(s) 115
Lsp1109I GCAGC 2 cut(s) 230, 290
MaeI CTAG 1 cut(s) 327
MaeII ACGT 2 cut(s) 273, 315
MaeIII GTNAC 1 cut(s) 79
MalI GATC 1 cut(s) 249
MboI GATC 1 cut(s) 247
MboII GAAGA 1 cut(s) 281
MfeI CAATTG 1 cut(s) 337
MluCI AATT 1 cut(s) 337
MnlI CCTC 1 cut(s) 242
MseI TTAA 2 cut(s) 60, 264
MspA1I CMGCKG 1 cut(s) 281
MspI CCGG 1 cut(s) 65
MspR9I CCNGG 1 cut(s) 66
MunI CAATTG 1 cut(s) 337
Mva1269I GAATGC 1 cut(s) 117
MwoI GCNNNNNNNGC 1 cut(s) 144
NciI CCSGG 1 cut(s) 66
NdeII GATC 1 cut(s) 247
NlaIII CATG 1 cut(s) 49
NmuCI GTSAC 1 cut(s) 79
PctI GAATGC 1 cut(s) 117
PflMI CCANNNNNTGG 1 cut(s) 94
PkrI GCNGC 3 cut(s) 43, 220, 280
Psp1406I AACGTT 1 cut(s) 315
PvuII CAGCTG 1 cut(s) 281
SaqAI TTAA 2 cut(s) 60, 264
SatI GCNGC 3 cut(s) 42, 219, 279
Sau3AI GATC 1 cut(s) 247
ScrFI CCNGG 1 cut(s) 66
SetI ASST 5 cut(s) 22, 192, 276, 283, 318
SmlI CTYRAG 1 cut(s) 233
SmoI CTYRAG 1 cut(s) 233
Sse9I AATT 1 cut(s) 337
SsiI CCGC 2 cut(s) 41, 243
SspMI CTAG 1 cut(s) 327
StyD4I CCNGG 1 cut(s) 64
TaaI ACNGT 1 cut(s) 79
TaiI ACGT 2 cut(s) 276, 318
TasI AATT 1 cut(s) 337
TauI GCSGC 1 cut(s) 44
Tru1I TTAA 2 cut(s) 60, 264
Tru9I TTAA 2 cut(s) 60, 264
TscAI CASTG 3 cut(s) 139, 145, 298
TseFI GTSAC 1 cut(s) 79
TseI GCWGC 2 cut(s) 218, 278
Tsp45I GTSAC 1 cut(s) 79
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 3 cut(s) 139, 145, 298
Van91I CCANNNNNTGG 1 cut(s) 94
XcmI CCANNNNNNNNNTGG 1 cut(s) 52
XspI CTAG 1 cut(s) 327
ZraI GACGTC 1 cut(s) 274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.