Prupe.2G129200_v2.0.a1

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
18645204 .. 18645413
210 bp
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UTR
Exon/CDS
Intron
Prupe.2G129200.1

Sequence Viewer

Length: 210 bp
ATGAAGGGAATTGTGATAGCAATGTTGGTTGTGCTAGTCCTGGCTCACCTAATGGTGCAGCAAGGAGAGGCAGTCAATTGTGGCCAAGTCAACTCGAATTTAGCCCCTTGTGTTACCTATCTGACCTCCGGGGGAGTACCCCCGGAGGCTTGCTGCAAAGGGGTGGAAAACATCAAGGCAATCGCGCAAACCACCGCAGATAGGCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

70

Amino Acids

7.2

Weight (kDa)

7.67

Isoelectric Point (pI)

30.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 185
AciI CCGC 2 cut(s) 195, 205
AcoI YGGCCR 1 cut(s) 82
AcsI RAATTY 1 cut(s) 97
AfaI GTAC 1 cut(s) 138
AfiI CCNNNNNNNGG 1 cut(s) 201
AjnI CCWGG 1 cut(s) 39
AoxI GGCC 1 cut(s) 82
ApeKI GCWGC 2 cut(s) 58, 153
ApoI RAATTY 1 cut(s) 97
AspLEI GCGC 1 cut(s) 187
AsuC2I CCSGG 2 cut(s) 130, 143
AsuHPI GGTGA 1 cut(s) 38
BalI TGGCCA 1 cut(s) 84
BbvI GCAGC 2 cut(s) 70, 140
BciT130I CCWGG 1 cut(s) 41
BcnI CCSGG 2 cut(s) 130, 143
BfaI CTAG 1 cut(s) 35
BisI GCNGC 2 cut(s) 59, 154
BlsI GCNGC 2 cut(s) 60, 155
Bme1390I CCNGG 3 cut(s) 41, 130, 143
BmrFI CCNGG 3 cut(s) 41, 130, 143
BpuMI CCSGG 2 cut(s) 130, 143
BsaJI CCNNGG 2 cut(s) 129, 141
BsaXI ACNNNNNCTCC 2 cut(s) 57, 87
Bsc4I CCNNNNNNNGG 1 cut(s) 201
Bse3DI GCAATG 1 cut(s) 27
BseBI CCWGG 1 cut(s) 41
BseDI CCNNGG 2 cut(s) 129, 141
BseLI CCNNNNNNNGG 1 cut(s) 201
BseMI GCAATG 1 cut(s) 27
BseXI GCAGC 2 cut(s) 70, 140
BsgI GTGCAG 1 cut(s) 77
Bsh1236I CGCG 1 cut(s) 185
BshFI GGCC 1 cut(s) 84
BsiSI CCGG 2 cut(s) 129, 143
BslI CCNNNNNNNGG 1 cut(s) 201
BsnI GGCC 1 cut(s) 84
BspACI CCGC 2 cut(s) 195, 205
BspANI GGCC 1 cut(s) 84
BspFNI CGCG 1 cut(s) 185
BsrDI GCAATG 1 cut(s) 27
BssECI CCNNGG 2 cut(s) 129, 141
Bst2UI CCWGG 1 cut(s) 41
BstC8I GCNNGC 1 cut(s) 151
BstFNI CGCG 1 cut(s) 185
BstHHI GCGC 1 cut(s) 187
BstNI CCWGG 1 cut(s) 41
BstSCI CCNGG 3 cut(s) 39, 128, 141
BstUI CGCG 1 cut(s) 185
BstV1I GCAGC 2 cut(s) 70, 140
BsuRI GGCC 1 cut(s) 84
Cac8I GCNNGC 1 cut(s) 151
CfoI GCGC 1 cut(s) 187
Csp6I GTAC 1 cut(s) 137
CviJI RGCY 4 cut(s) 44, 84, 104, 149
CviKI_1 RGCY 4 cut(s) 44, 84, 104, 149
CviQI GTAC 1 cut(s) 137
EaeI YGGCCR 1 cut(s) 82
EcoRII CCWGG 1 cut(s) 39
Fnu4HI GCNGC 2 cut(s) 59, 154
Fsp4HI GCNGC 2 cut(s) 59, 154
FspBI CTAG 1 cut(s) 35
GlaI GCGC 1 cut(s) 186
GluI GCNGC 2 cut(s) 59, 154
HaeIII GGCC 1 cut(s) 84
HapII CCGG 2 cut(s) 129, 143
HhaI GCGC 1 cut(s) 187
Hin6I GCGC 1 cut(s) 185
HinP1I GCGC 1 cut(s) 185
HincII GTYRAC 1 cut(s) 91
HindII GTYRAC 1 cut(s) 91
HpaII CCGG 2 cut(s) 129, 143
HphI GGTGA 1 cut(s) 38
Hpy166II GTNNAC 1 cut(s) 91
Hpy188I TCNGA 1 cut(s) 123
Hpy8I GTNNAC 1 cut(s) 91
HpyCH4V TGCA 2 cut(s) 58, 156
HspAI GCGC 1 cut(s) 185
LpnPI CCDG 4 cut(s) 26, 53, 142, 156
Lsp1109I GCAGC 2 cut(s) 70, 140
MaeI CTAG 1 cut(s) 35
MaeIII GTNAC 1 cut(s) 112
MfeI CAATTG 1 cut(s) 76
MlsI TGGCCA 1 cut(s) 84
MluCI AATT 3 cut(s) 9, 76, 97
MluNI TGGCCA 1 cut(s) 84
MnlI CCTC 3 cut(s) 61, 136, 139
Mox20I TGGCCA 1 cut(s) 84
MscI TGGCCA 1 cut(s) 84
Msp20I TGGCCA 1 cut(s) 84
MspI CCGG 2 cut(s) 129, 143
MspR9I CCNGG 3 cut(s) 41, 130, 143
MunI CAATTG 1 cut(s) 76
MvaI CCWGG 1 cut(s) 41
MvnI CGCG 1 cut(s) 185
NciI CCSGG 2 cut(s) 130, 143
PkrI GCNGC 2 cut(s) 60, 155
Psp6I CCWGG 1 cut(s) 39
PspGI CCWGG 1 cut(s) 39
RsaI GTAC 1 cut(s) 138
RsaNI GTAC 1 cut(s) 137
SatI GCNGC 2 cut(s) 59, 154
ScrFI CCNGG 3 cut(s) 41, 130, 143
SetI ASST 3 cut(s) 51, 119, 128
Sse9I AATT 3 cut(s) 9, 76, 97
SsiI CCGC 2 cut(s) 195, 205
SspMI CTAG 1 cut(s) 35
StyD4I CCNGG 3 cut(s) 39, 128, 141
TaqI TCGA 1 cut(s) 95
TasI AATT 3 cut(s) 9, 76, 97
TseI GCWGC 2 cut(s) 58, 153
TspDTI ATGAA 1 cut(s) 17
XapI RAATTY 1 cut(s) 97
XspI CTAG 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.