AT5G64970

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
25958025 .. 25960663
2639 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G64970.3

Sequence Viewer

Length: 1287 bp
ATGCGTGGCCTTGATCGATGGATAGCTGAAGCAATCAGATCAGAGTCATTAGATCACAATGGTCAAATCATCTGCGGTGGGTTGTTTCTCGAAGAATCTCTTCCTTCCTCGTCTGTCTCTTTTCTTTCGTCGAAGGATTGTTCCGTCAATTCGTGTCGCTTCAGTCAAAAGTCGAGTTTTTTGAAGTTTAGGAGACGAAACGGGACCAGGGAACCTCTGTTTCTGTCTGTTAGTTTATCGATTAACGAGAGTAATGGTGAGGAAGAAGAAGGTGAAGGGTATAATGGTCAAAACGGCTTTAAATCGGAGAAAGGTTCGGTGTTGATCGGTGGTGGTCAAGAATCTAAGGAGAAGCGTAGGGTTAAGGAAAATGGAGCAGGAGCTCTCAACACAACCAAGCATTTATGGGCTGGAGCTTTTGCAGCCATGGTTTCAAGAACTTGCATTGCACCTCTTGAACGGATGAAGCTAGAATACATTGTTCGCGGAGAGCAAGGGAATCTTCTTGAACTCATTCAGAGGATTGCAACAAATGAAGGGATTAGAGGATTTTGGAAAGGGAATTTGGTTAATATTCTCAGAACTGCTCCCTTTAAGTCCATCAACTTCTATGCATATGATACATATAGAGGTCAGCTTCTGAAATTGTCCGGGAATGAAGAAACGACAAATTTCGAGAGGTTTGTTGCTGGTGCAGCTGCCGGAGTAACAGCTAGTTTGCTTTGTCTACCACTTGATACTATAAGAACGGTTATGGTGGCACCCGGTGGAGAAGCATTAGGTGGTGTAGTTGGTGCATTCCGTCACATGATTCAAACTGAAGGTTTCTTTTCCCTATACAAAGGTCTTGTACCTTCACTTGTTAGTATGGCTCCATCGGGAGCTGTGTTCTACGGTGTCTATGATATTTTAAAATCAGCTTACCTTCATACACCGGAAGGTAAGAAACGGCTTGAACACATGAAGCAAGAAGGTGAAGAACTTAATGCTTTCGATCAACTCGAGCTTGGTCCCATGAGAACTTTGTTATATGGAGCAATCGCAGGGGCTTGCTCAGAAGCAGCAACATATCCGTTTGAAGTTGTGAGAAGGCGTTTACAAATGCAGTCACATGCTAAAAGGTTAAGCGCAGTGGCTACTTGTGTGAAGATCATTGAACAAGGAGGTGTTCCTGCTCTATATGCTGGCTTGATTCCCAGCTTATTGCAGGTTTTGCCTTCCGCGGCAATCAGTTACTTTGTTTACGAGTTCATGAAAGTTGTTCTGAAAGTAGAATCATCCGCATAA

Protein Analysis

428

Amino Acids

46.82

Weight (kDa)

8.7

Isoelectric Point (pI)

44.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 129 - 213 5.8e-20 Mitochondrial carrier protein
Mito_carr PF00153 222 - 309 1.8e-19 Mitochondrial carrier protein
Mito_carr PF00153 336 - 403 9.6e-15 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1198
AccB1I GGYRCC 1 cut(s) 760
AccI GTMKAC 1 cut(s) 727
AccII CGCG 2 cut(s) 486, 1223
AciI CCGC 5 cut(s) 75, 486, 1221, 1223, 1281
AcsI RAATTY 2 cut(s) 562, 670
AcuI CTGAAG 3 cut(s) 48, 145, 840
AdeI CACNNNGTG 1 cut(s) 767
AfaI GTAC 1 cut(s) 852
AgsI TTSAA 8 cut(s) 184, 435, 458, 509, 815, 956, 1079, 1157
AjnI CCWGG 1 cut(s) 206
AjuI GAANNNNNNNTTGG 2 cut(s) 548, 580
Alw21I GWGCWC 1 cut(s) 385
Alw26I GTCTC 2 cut(s) 121, 187
AlwNI CAGNNNCTG 1 cut(s) 640
Ama87I CYCGRG 1 cut(s) 1001
AoxI GGCC 1 cut(s) 7
ApeKI GCWGC 4 cut(s) 422, 695, 698, 1061
ApoI RAATTY 2 cut(s) 562, 670
Asp700I GAANNNNTTC 2 cut(s) 99, 513
AspLEI GCGC 1 cut(s) 1130
AspS9I GGNCC 2 cut(s) 204, 1010
AsuC2I CCSGG 2 cut(s) 652, 765
AsuHPI GGTGA 3 cut(s) 269, 284, 986
AvaI CYCGRG 1 cut(s) 1001
AvaII GGWCC 2 cut(s) 204, 1010
BanI GGYRCC 1 cut(s) 760
BanII GRGCYC 1 cut(s) 385
BarI GAAGNNNNNNTAC 2 cut(s) 458, 490
Bbv12I GWGCWC 1 cut(s) 385
BbvI GCAGC 4 cut(s) 434, 685, 707, 1073
BccI CCATC 3 cut(s) 12, 608, 883
BceAI ACGGC 2 cut(s) 310, 965
BciT130I CCWGG 1 cut(s) 208
BcnI CCSGG 2 cut(s) 652, 765
BcoDI GTCTC 2 cut(s) 121, 187
BfaI CTAG 2 cut(s) 470, 714
BfuAI ACCTGC 1 cut(s) 1198
BisI GCNGC 5 cut(s) 423, 696, 699, 1062, 1224
BlsI GCNGC 5 cut(s) 424, 697, 700, 1063, 1225
Bme1390I CCNGG 3 cut(s) 208, 652, 765
Bme18I GGWCC 2 cut(s) 204, 1010
BmeT110I CYCGRG 1 cut(s) 1001
BmgT120I GGNCC 2 cut(s) 204, 1010
BmiI GGNNCC 5 cut(s) 205, 213, 762, 873, 1012
BmrFI CCNGG 3 cut(s) 208, 652, 765
BpmI CTGGAG 1 cut(s) 432
BpuMI CCSGG 2 cut(s) 652, 765
Bsa29I ATCGAT 2 cut(s) 16, 239
BsaJI CCNNGG 3 cut(s) 207, 426, 1221
BsaWI WCCGGW 1 cut(s) 934
Bse3DI GCAATG 1 cut(s) 444
BseBI CCWGG 1 cut(s) 208
BseCI ATCGAT 2 cut(s) 16, 239
BseDI CCNNGG 3 cut(s) 207, 426, 1221
BseGI GGATG 2 cut(s) 468, 1277
BseMI GCAATG 1 cut(s) 444
BseMII CTCAG 2 cut(s) 592, 1068
BseXI GCAGC 4 cut(s) 434, 685, 707, 1073
BseYI CCCAGC 1 cut(s) 1196
BsgI GTGCAG 1 cut(s) 714
Bsh1236I CGCG 2 cut(s) 486, 1223
BshFI GGCC 1 cut(s) 9
BshNI GGYRCC 1 cut(s) 760
BshVI ATCGAT 2 cut(s) 16, 239
BsiHKAI GWGCWC 1 cut(s) 385
BsiHKCI CYCGRG 1 cut(s) 1001
BsiSI CCGG 4 cut(s) 651, 702, 765, 935
BslFI GGGAC 2 cut(s) 217, 996
BsmAI GTCTC 2 cut(s) 121, 187
BsmBI CGTCTC 1 cut(s) 187
BsmFI GGGAC 2 cut(s) 217, 996
BsmI GAATGC 1 cut(s) 797
BsnI GGCC 1 cut(s) 9
BsoBI CYCGRG 1 cut(s) 1001
Bsp1286I GDGCHC 1 cut(s) 385
Bsp143I GATC 6 cut(s) 13, 38, 52, 324, 994, 1149
Bsp19I CCATGG 1 cut(s) 426
BspACI CCGC 5 cut(s) 75, 486, 1221, 1223, 1281
BspANI GGCC 1 cut(s) 9
BspCNI CTCAG 2 cut(s) 591, 1067
BspDI ATCGAT 2 cut(s) 16, 239
BspFNI CGCG 2 cut(s) 486, 1223
BspHI TCATGA 1 cut(s) 1251
BspLI GGNNCC 5 cut(s) 205, 213, 762, 873, 1012
BspMI ACCTGC 1 cut(s) 1198
BspT107I GGYRCC 1 cut(s) 760
BsrDI GCAATG 1 cut(s) 444
BssECI CCNNGG 3 cut(s) 207, 426, 1221
BssMI GATC 6 cut(s) 13, 38, 52, 324, 994, 1149
BssT1I CCWWGG 1 cut(s) 426
Bst2UI CCWGG 1 cut(s) 208
Bst4CI ACNGT 2 cut(s) 751, 896
Bst6I CTCTTC 1 cut(s) 105
BstAPI GCANNNNNTGC 1 cut(s) 1213
BstC8I GCNNGC 2 cut(s) 1051, 1186
BstDEI CTNAG 3 cut(s) 345, 578, 1054
BstDSI CCRYGG 2 cut(s) 426, 1221
BstF5I GGATG 2 cut(s) 468, 1277
BstFNI CGCG 2 cut(s) 486, 1223
BstHHI GCGC 1 cut(s) 1130
BstKTI GATC 6 cut(s) 16, 41, 55, 327, 997, 1152
BstMAI GTCTC 2 cut(s) 121, 187
BstMBI GATC 6 cut(s) 13, 38, 52, 324, 994, 1149
BstMWI GCNNNNNNNGC 4 cut(s) 422, 695, 1181, 1213
BstNI CCWGG 1 cut(s) 208
BstNSI RCATGY 1 cut(s) 1115
BstSCI CCNGG 3 cut(s) 206, 650, 763
BstUI CGCG 2 cut(s) 486, 1223
BstV1I GCAGC 4 cut(s) 434, 685, 707, 1073
Bsu15I ATCGAT 2 cut(s) 16, 239
BsuRI GGCC 1 cut(s) 9
BsuTUI ATCGAT 2 cut(s) 16, 239
BtgI CCRYGG 2 cut(s) 426, 1221
BtsCI GGATG 2 cut(s) 468, 1277
BtsI GCAGTG 1 cut(s) 1137
BtsIMutI CAGTG 1 cut(s) 1137
BveI ACCTGC 1 cut(s) 1198
Cac8I GCNNGC 2 cut(s) 1051, 1186
CaiI CAGNNNCTG 1 cut(s) 640
CciI TCATGA 1 cut(s) 1251
CfoI GCGC 1 cut(s) 1130
Cfr13I GGNCC 2 cut(s) 204, 1010
Cfr42I CCGCGG 1 cut(s) 1224
ClaI ATCGAT 2 cut(s) 16, 239
Csp6I GTAC 1 cut(s) 851
CviAII CATG 6 cut(s) 427, 808, 961, 1015, 1112, 1252
CviQI GTAC 1 cut(s) 851
DdeI CTNAG 3 cut(s) 345, 578, 1054
DpnI GATC 6 cut(s) 15, 40, 54, 326, 996, 1151
DpnII GATC 6 cut(s) 13, 38, 52, 324, 994, 1149
DraI TTTAAA 2 cut(s) 301, 912
DraIII CACNNNGTG 1 cut(s) 767
Eam1104I CTCTTC 1 cut(s) 105
EarI CTCTTC 1 cut(s) 105
Ecl136II GAGCTC 1 cut(s) 383
Eco130I CCWWGG 1 cut(s) 426
Eco24I GRGCYC 1 cut(s) 385
Eco47I GGWCC 2 cut(s) 204, 1010
Eco53kI GAGCTC 1 cut(s) 383
Eco57I CTGAAG 3 cut(s) 48, 145, 840
Eco88I CYCGRG 1 cut(s) 1001
EcoICRI GAGCTC 1 cut(s) 383
EcoRII CCWGG 1 cut(s) 206
EcoT14I CCWWGG 1 cut(s) 426
EcoT22I ATGCAT 1 cut(s) 616
EcoT38I GRGCYC 1 cut(s) 385
ErhI CCWWGG 1 cut(s) 426
Esp3I CGTCTC 1 cut(s) 187
FaeI CATG 6 cut(s) 430, 811, 964, 1018, 1115, 1255
FalI AAGNNNNNCTT 4 cut(s) 84, 116, 486, 518
FaqI GGGAC 2 cut(s) 217, 996
FatI CATG 6 cut(s) 426, 807, 960, 1014, 1111, 1251
FauNDI CATATG 1 cut(s) 616
FblI GTMKAC 1 cut(s) 727
Fnu4HI GCNGC 5 cut(s) 423, 696, 699, 1062, 1224
FokI GGATG 2 cut(s) 475, 1264
FriOI GRGCYC 1 cut(s) 385
Fsp4HI GCNGC 5 cut(s) 423, 696, 699, 1062, 1224
FspBI CTAG 2 cut(s) 470, 714
GlaI GCGC 1 cut(s) 1129
GluI GCNGC 5 cut(s) 423, 696, 699, 1062, 1224
GsaI CCCAGC 1 cut(s) 1200
GsuI CTGGAG 1 cut(s) 432
HaeIII GGCC 1 cut(s) 9
HapII CCGG 4 cut(s) 651, 702, 765, 935
HhaI GCGC 1 cut(s) 1130
Hin1II CATG 6 cut(s) 430, 811, 964, 1018, 1115, 1255
Hin6I GCGC 1 cut(s) 1128
HinP1I GCGC 1 cut(s) 1128
HinfI GANTC 7 cut(s) 44, 95, 341, 499, 811, 1192, 1274
HpaII CCGG 4 cut(s) 651, 702, 765, 935
HphI GGTGA 3 cut(s) 269, 284, 986
Hpy166II GTNNAC 3 cut(s) 728, 1097, 1243
Hpy188I TCNGA 8 cut(s) 38, 43, 307, 519, 581, 642, 1057, 1266
Hpy188III TCNNGA 8 cut(s) 89, 338, 435, 455, 506, 676, 879, 1252
Hpy8I GTNNAC 3 cut(s) 728, 1097, 1243
Hpy99I CGWCG 1 cut(s) 133
HpyCH4III ACNGT 2 cut(s) 751, 896
HpyCH4V TGCA 9 cut(s) 422, 444, 449, 527, 614, 695, 797, 1105, 1207
HpyF10VI GCNNNNNNNGC 4 cut(s) 422, 695, 1181, 1213
HpyF3I CTNAG 3 cut(s) 345, 578, 1054
Hsp92II CATG 6 cut(s) 430, 811, 964, 1018, 1115, 1255
HspAI GCGC 1 cut(s) 1128
KspI CCGCGG 1 cut(s) 1224
Kzo9I GATC 6 cut(s) 13, 38, 52, 324, 994, 1149
LmnI GCTCC 7 cut(s) 374, 380, 413, 592, 877, 881, 1034
Lsp1109I GCAGC 4 cut(s) 434, 685, 707, 1073
MaeI CTAG 2 cut(s) 470, 714
MaeIII GTNAC 4 cut(s) 706, 803, 1107, 1232
MalI GATC 6 cut(s) 15, 40, 54, 326, 996, 1151
MboI GATC 6 cut(s) 13, 38, 52, 324, 994, 1149
MboII GAAGA 8 cut(s) 92, 104, 275, 278, 494, 671, 989, 1159
MhlI GDGCHC 1 cut(s) 385
MluCI AATT 4 cut(s) 148, 562, 644, 670
MlyI GAGTC 1 cut(s) 53
MnlI CCTC 9 cut(s) 118, 225, 253, 462, 513, 539, 623, 672, 1157
Mph1103I ATGCAT 1 cut(s) 616
MroXI GAANNNNTTC 2 cut(s) 99, 513
MseI TTAA 8 cut(s) 243, 300, 363, 570, 594, 911, 984, 1124
MspA1I CMGCKG 2 cut(s) 698, 1223
MspI CCGG 4 cut(s) 651, 702, 765, 935
MspR9I CCNGG 3 cut(s) 208, 652, 765
Mva1269I GAATGC 1 cut(s) 797
MvaI CCWGG 1 cut(s) 208
MvnI CGCG 2 cut(s) 486, 1223
MwoI GCNNNNNNNGC 4 cut(s) 422, 695, 1181, 1213
NciI CCSGG 2 cut(s) 652, 765
NcoI CCATGG 1 cut(s) 426
NdeI CATATG 1 cut(s) 616
NdeII GATC 6 cut(s) 13, 38, 52, 324, 994, 1149
NlaIII CATG 6 cut(s) 430, 811, 964, 1018, 1115, 1255
NlaIV GGNNCC 5 cut(s) 205, 213, 762, 873, 1012
NmuCI GTSAC 2 cut(s) 803, 1107
NsiI ATGCAT 1 cut(s) 616
NspI RCATGY 1 cut(s) 1115
PaeR7I CTCGAG 1 cut(s) 1001
PagI TCATGA 1 cut(s) 1251
PcsI WCGNNNNNNNCGW 1 cut(s) 999
PctI GAATGC 1 cut(s) 797
PdmI GAANNNNTTC 2 cut(s) 99, 513
PfeI GAWTC 6 cut(s) 95, 341, 499, 811, 1192, 1274
PfoI TCCNGGA 1 cut(s) 650
PkrI GCNGC 5 cut(s) 424, 697, 700, 1063, 1225
PleI GAGTC 1 cut(s) 52
PpsI GAGTC 1 cut(s) 52
Psp124BI GAGCTC 1 cut(s) 385
Psp6I CCWGG 1 cut(s) 206
PspFI CCCAGC 1 cut(s) 1196
PspGI CCWGG 1 cut(s) 206
PspN4I GGNNCC 5 cut(s) 205, 213, 762, 873, 1012
PspPI GGNCC 2 cut(s) 204, 1010
PspXI VCTCGAGB 1 cut(s) 1001
PstNI CAGNNNCTG 1 cut(s) 640
PvuII CAGCTG 1 cut(s) 698
RsaI GTAC 1 cut(s) 852
RsaNI GTAC 1 cut(s) 851
SacI GAGCTC 1 cut(s) 385
SacII CCGCGG 1 cut(s) 1224
SaqAI TTAA 8 cut(s) 243, 300, 363, 570, 594, 911, 984, 1124
SatI GCNGC 5 cut(s) 423, 696, 699, 1062, 1224
Sau3AI GATC 6 cut(s) 13, 38, 52, 324, 994, 1149
Sau96I GGNCC 2 cut(s) 204, 1010
SchI GAGTC 1 cut(s) 53
ScrFI CCNGG 3 cut(s) 208, 652, 765
SduI GDGCHC 1 cut(s) 385
Sfr274I CTCGAG 1 cut(s) 1001
Sfr303I CCGCGG 1 cut(s) 1224
SgrBI CCGCGG 1 cut(s) 1224
SinI GGWCC 2 cut(s) 204, 1010
SlaI CTCGAG 1 cut(s) 1001
SmlI CTYRAG 1 cut(s) 1001
SmoI CTYRAG 1 cut(s) 1001
Sse9I AATT 4 cut(s) 148, 562, 644, 670
SsiI CCGC 5 cut(s) 75, 486, 1221, 1223, 1281
SspI AATATT 1 cut(s) 574
SspMI CTAG 2 cut(s) 470, 714
SstI GAGCTC 1 cut(s) 385
StyD4I CCNGG 3 cut(s) 206, 650, 763
StyI CCWWGG 1 cut(s) 426
TaaI ACNGT 2 cut(s) 751, 896
TaqI TCGA 8 cut(s) 16, 90, 131, 173, 239, 675, 993, 1002
TasI AATT 4 cut(s) 148, 562, 644, 670
TauI GCSGC 1 cut(s) 1226
TfiI GAWTC 6 cut(s) 95, 341, 499, 811, 1192, 1274
Tru1I TTAA 8 cut(s) 243, 300, 363, 570, 594, 911, 984, 1124
Tru9I TTAA 8 cut(s) 243, 300, 363, 570, 594, 911, 984, 1124
TscAI CASTG 1 cut(s) 1137
TseFI GTSAC 2 cut(s) 803, 1107
TseI GCWGC 4 cut(s) 422, 695, 698, 1061
Tsp45I GTSAC 2 cut(s) 803, 1107
TspDTI ATGAA 7 cut(s) 479, 549, 672, 917, 977, 1240, 1268
TspGWI ACGGA 4 cut(s) 133, 475, 791, 1062
TspRI CASTG 1 cut(s) 1137
VpaK11BI GGWCC 2 cut(s) 204, 1010
XapI RAATTY 2 cut(s) 562, 670
XceI RCATGY 1 cut(s) 1115
XhoI CTCGAG 1 cut(s) 1001
XmiI GTMKAC 1 cut(s) 727
XmnI GAANNNNTTC 2 cut(s) 99, 513
XspI CTAG 2 cut(s) 470, 714
Zsp2I ATGCAT 1 cut(s) 616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.