Rh2BG256000

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
26493146 .. 26495933
2788 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG256000.1

Sequence Viewer

Length: 1278 bp
ATGCACCACCGCGCCGGTTTCAACCTCTCTCGCTTGATCCAATCCCCGCCGCCCGATCCCGACCCCTCGCTCCTCTTCCTCGGCGGCGGCTTGTTCCTCCACCCTGATCAAACCGTCTCTCCCGCCTTCCTTTCCCTCCTTCCGGCCAAGTCCAAGACCCGGTCGGGTTCGGGTCGGTGTTTCAGCAAAACGGTGCGTTTTGGGGGCGGCCGCGGGTTCTTGTGTGTGAGCTTGTCAGATGGAAACGAGGGGTATGTTCGGGAATCGGGAGAAGTCCTGGGGCAAAATGGGAATAAAAATTCGACGGCGGAAGAGCAGGCGGCGGAGGTTGTGTTTGAGAAGGAGCGGAGTGAGATTGTGGAGAAGGGATCAGGTGCTATGAATACTACCAAGCATCTCTGGTCTGGAGCTGTTGCTGCCATGGTTTCAAGAACGTTTGTTGCTCCTCTCGAGAGGCTAAAGCTGGAGTACATAATACGTGGTGAGCAGAAGAACTTGGTTGAGCTCATCAAGACGATTGCAGATTCTCAAGGGCTGAAAGGATTTTGGAAAGGGAATTTTGTGAATATTCTTCGCACGGCACCCTTCAAGGCTATCAATTTCTATGCCTATGATACGTACAGAAATCATCTAGTGAAGTTGTCGGGGAATGAGGAATCCACGAATTTTGAGAGGTTTCTTGCTGGTGCTGCAGCTGGAATTACAGCTACCTTGCTCTGCTTGCCCATGGACACTATCCGGACAAAGATGGTAGCTCCTGGTGGAGAAGCATTGGGTGGTGTAATTGGTGCTTTCCGCCACATGATTCAAACCGAAGGATTCTTCTCTCTTTACAAGGGCTTACTACCCTCTATTGTCAGTATGGCACCTTCAGGTGCAGTTTTCTACGGCGTCTATGATATACTGAAATCAGCTTATCTGCATTCACCTGAAGGGAAGGAGAGACTCCGACACATGAAACAAGAAGGTGACAAACTGAATGCTCTGGAACAAATGGAGTTGGGTACCATTAGAACATTACTGTATGGGGCAATTGCCGGTTGTTGCTCTGAAGCCGCTACATATCCTTTTGAAGTTGTGAGGAGACACCTTCAAATGCAAGTTCCGGCAACTAGATTAAGTGCAGTTGCAACTTGTGCTAAGATTGTTGAGCAAGGAGGTGTTCCTGCTCTTTATGCTGGATTGATACCCAGCTTGTTGCAGGTCTTACCATCTGCTGCCATCAGTTATTTTGTGTACGAGTTCATGAAGATTCTTCTCAAAGTAGAGTCTTCATAG

Protein Analysis

425

Amino Acids

46.21

Weight (kDa)

8.96

Isoelectric Point (pI)

41.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 127 - 213 2.2e-19 Mitochondrial carrier protein
Mito_carr PF00153 220 - 307 2.1e-20 Mitochondrial carrier protein
Mito_carr PF00153 335 - 421 6.3e-19 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1192
Acc65I GGTACC 1 cut(s) 1004
AccB1I GGYRCC 3 cut(s) 580, 865, 1004
AccBSI CCGCTC 1 cut(s) 346
AccII CGCG 2 cut(s) 12, 213
AccIII TCCGGA 1 cut(s) 738
AclI AACGTT 1 cut(s) 434
AclWI GGATC 3 cut(s) 31, 50, 376
AcoI YGGCCR 2 cut(s) 144, 208
AcsI RAATTY 3 cut(s) 298, 556, 664
AcuI CTGAAG 3 cut(s) 855, 951, 1071
AcyI GRCGYC 1 cut(s) 891
AfaI GTAC 4 cut(s) 470, 620, 1006, 1238
AfiI CCNNNNNNNGG 2 cut(s) 142, 159
AgsI TTSAA 6 cut(s) 22, 429, 589, 809, 1073, 1094
AjnI CCWGG 2 cut(s) 276, 757
AluBI AGCT 9 cut(s) 231, 410, 463, 505, 695, 707, 755, 914, 1194
AluI AGCT 9 cut(s) 231, 410, 463, 505, 695, 707, 755, 914, 1194
Alw21I GWGCWC 1 cut(s) 507
Alw26I GTCTC 3 cut(s) 121, 937, 1078
AlwI GGATC 3 cut(s) 31, 50, 376
Ama87I CYCGRG 1 cut(s) 449
Aor13HI TCCGGA 1 cut(s) 738
AoxI GGCC 2 cut(s) 144, 208
ApeKI GCWGC 4 cut(s) 416, 689, 692, 1217
ApoI RAATTY 3 cut(s) 298, 556, 664
Asp718I GGTACC 1 cut(s) 1004
AspLEI GCGC 1 cut(s) 14
AsuC2I CCSGG 1 cut(s) 160
AsuHPI GGTGA 3 cut(s) 494, 918, 980
AvaI CYCGRG 1 cut(s) 449
BanI GGYRCC 3 cut(s) 580, 865, 1004
BanII GRGCYC 1 cut(s) 507
BarI GAAGNNNNNNTAC 2 cut(s) 853, 885
BbsI GAAGAC 1 cut(s) 1263
Bbv12I GWGCWC 1 cut(s) 507
BbvI GCAGC 4 cut(s) 403, 676, 704, 1204
BccI CCATC 4 cut(s) 233, 742, 1219, 1229
BceAI ACGGC 3 cut(s) 321, 594, 904
BciT130I CCWGG 2 cut(s) 278, 759
BclI TGATCA 1 cut(s) 106
BcnI CCSGG 1 cut(s) 160
BcoDI GTCTC 3 cut(s) 121, 937, 1078
BfaI CTAG 2 cut(s) 632, 1113
BfmI CTRYAG 1 cut(s) 690
BfuAI ACCTGC 1 cut(s) 1192
Bme1390I CCNGG 3 cut(s) 160, 278, 759
BmeT110I CYCGRG 1 cut(s) 449
BmiI GGNNCC 3 cut(s) 582, 867, 1006
BmrFI CCNGG 3 cut(s) 160, 278, 759
BmsI GCATC 1 cut(s) 403
BpiI GAAGAC 1 cut(s) 1263
BpmI CTGGAG 2 cut(s) 426, 485
BpuEI CTTGAG 1 cut(s) 513
BpuMI CCSGG 1 cut(s) 160
BsaAI YACGTR 2 cut(s) 479, 618
BsaHI GRCGYC 1 cut(s) 891
BsaJI CCNNGG 5 cut(s) 79, 211, 277, 420, 726
BsaWI WCCGGW 1 cut(s) 738
BsaXI ACNNNNNCTCC 4 cut(s) 103, 133, 317, 347
Bsc4I CCNNNNNNNGG 2 cut(s) 142, 159
Bse118I RCCGGY 2 cut(s) 14, 1037
BseAI TCCGGA 1 cut(s) 738
BseBI CCWGG 2 cut(s) 278, 759
BseDI CCNNGG 5 cut(s) 79, 211, 277, 420, 726
BseLI CCNNNNNNNGG 2 cut(s) 142, 159
BseRI GAGGAG 3 cut(s) 62, 435, 1096
BseX3I CGGCCG 1 cut(s) 208
BseXI GCAGC 4 cut(s) 403, 676, 704, 1204
BseYI CCCAGC 1 cut(s) 1190
BsgI GTGCAG 2 cut(s) 897, 1143
Bsh1236I CGCG 2 cut(s) 12, 213
Bsh1285I CGRYCG 2 cut(s) 164, 211
BshFI GGCC 2 cut(s) 146, 210
BshNI GGYRCC 3 cut(s) 580, 865, 1004
BsiEI CGRYCG 2 cut(s) 164, 211
BsiHKAI GWGCWC 1 cut(s) 507
BsiHKCI CYCGRG 1 cut(s) 449
BsiSI CCGG 6 cut(s) 15, 143, 160, 739, 1038, 1106
BslI CCNNNNNNNGG 2 cut(s) 142, 159
BsmAI GTCTC 3 cut(s) 121, 937, 1078
BsmBI CGTCTC 1 cut(s) 121
BsmI GAATGC 2 cut(s) 922, 985
BsnI GGCC 2 cut(s) 146, 210
BsoBI CYCGRG 1 cut(s) 449
Bsp1286I GDGCHC 1 cut(s) 507
Bsp13I TCCGGA 1 cut(s) 738
Bsp143I GATC 4 cut(s) 36, 55, 106, 368
Bsp19I CCATGG 2 cut(s) 420, 726
BspANI GGCC 2 cut(s) 146, 210
BspEI TCCGGA 1 cut(s) 738
BspFNI CGCG 2 cut(s) 12, 213
BspHI TCATGA 1 cut(s) 1245
BspLI GGNNCC 3 cut(s) 582, 867, 1006
BspMAI CTGCAG 1 cut(s) 694
BspMI ACCTGC 1 cut(s) 1192
BspPI GGATC 3 cut(s) 31, 50, 376
BspQI GCTCTTC 1 cut(s) 306
BspT107I GGYRCC 3 cut(s) 580, 865, 1004
BsrBI CCGCTC 1 cut(s) 346
BsrFI RCCGGY 2 cut(s) 14, 1037
BssAI RCCGGY 2 cut(s) 14, 1037
BssECI CCNNGG 5 cut(s) 79, 211, 277, 420, 726
BssMI GATC 4 cut(s) 36, 55, 106, 368
BssNI GRCGYC 1 cut(s) 891
BssT1I CCWWGG 2 cut(s) 420, 726
Bst2UI CCWGG 2 cut(s) 278, 759
Bst4CI ACNGT 3 cut(s) 115, 193, 1023
Bst6I CTCTTC 2 cut(s) 80, 306
BstACI GRCGYC 1 cut(s) 891
BstAPI GCANNNNNTGC 1 cut(s) 1136
BstBAI YACGTR 2 cut(s) 479, 618
BstC8I GCNNGC 2 cut(s) 318, 722
BstDEI CTNAG 1 cut(s) 1140
BstDSI CCRYGG 3 cut(s) 211, 420, 726
BstFNI CGCG 2 cut(s) 12, 213
BstHHI GCGC 1 cut(s) 14
BstKTI GATC 4 cut(s) 39, 58, 109, 371
BstMAI GTCTC 3 cut(s) 121, 937, 1078
BstMBI GATC 4 cut(s) 36, 55, 106, 368
BstMCI CGRYCG 2 cut(s) 164, 211
BstMWI GCNNNNNNNGC 5 cut(s) 416, 689, 721, 1136, 1175
BstNI CCWGG 2 cut(s) 278, 759
BstSCI CCNGG 3 cut(s) 158, 276, 757
BstSFI CTRYAG 1 cut(s) 690
BstSNI TACGTA 1 cut(s) 618
BstUI CGCG 2 cut(s) 12, 213
BstV1I GCAGC 4 cut(s) 403, 676, 704, 1204
BstV2I GAAGAC 1 cut(s) 1263
BstZI CGGCCG 1 cut(s) 208
BsuRI GGCC 2 cut(s) 146, 210
BtgI CCRYGG 3 cut(s) 211, 420, 726
BveI ACCTGC 1 cut(s) 1192
Cac8I GCNNGC 2 cut(s) 318, 722
CciI TCATGA 1 cut(s) 1245
CciNI GCGGCCGC 1 cut(s) 208
CfoI GCGC 1 cut(s) 14
Cfr10I RCCGGY 2 cut(s) 14, 1037
Cfr42I CCGCGG 1 cut(s) 214
CseI GACGC 1 cut(s) 880
Csp6I GTAC 4 cut(s) 469, 619, 1005, 1237
CspCI CAANNNNNGTGG 2 cut(s) 649, 684
CviAII CATG 5 cut(s) 421, 727, 802, 955, 1246
CviQI GTAC 4 cut(s) 469, 619, 1005, 1237
DdeI CTNAG 1 cut(s) 1140
DpnI GATC 4 cut(s) 38, 57, 108, 370
DpnII GATC 4 cut(s) 36, 55, 106, 368
EaeI YGGCCR 2 cut(s) 144, 208
EagI CGGCCG 1 cut(s) 208
Eam1104I CTCTTC 2 cut(s) 80, 306
EarI CTCTTC 2 cut(s) 80, 306
EciI GGCGGA 3 cut(s) 323, 338, 785
Ecl136II GAGCTC 1 cut(s) 505
EclXI CGGCCG 1 cut(s) 208
Eco105I TACGTA 1 cut(s) 618
Eco130I CCWWGG 2 cut(s) 420, 726
Eco24I GRGCYC 1 cut(s) 507
Eco52I CGGCCG 1 cut(s) 208
Eco53kI GAGCTC 1 cut(s) 505
Eco57I CTGAAG 3 cut(s) 855, 951, 1071
Eco88I CYCGRG 1 cut(s) 449
EcoICRI GAGCTC 1 cut(s) 505
EcoRII CCWGG 2 cut(s) 276, 757
EcoT14I CCWWGG 2 cut(s) 420, 726
EcoT38I GRGCYC 1 cut(s) 507
ErhI CCWWGG 2 cut(s) 420, 726
Esp3I CGTCTC 1 cut(s) 121
FaeI CATG 5 cut(s) 424, 730, 805, 958, 1249
FatI CATG 5 cut(s) 420, 726, 801, 954, 1245
FauI CCCGC 3 cut(s) 54, 130, 206
FbaI TGATCA 1 cut(s) 106
FriOI GRGCYC 1 cut(s) 507
FspBI CTAG 2 cut(s) 632, 1113
GlaI GCGC 1 cut(s) 13
GsaI CCCAGC 1 cut(s) 1194
GsuI CTGGAG 2 cut(s) 426, 485
HaeIII GGCC 2 cut(s) 146, 210
HapII CCGG 6 cut(s) 15, 143, 160, 739, 1038, 1106
HgaI GACGC 1 cut(s) 880
HhaI GCGC 1 cut(s) 14
Hin1I GRCGYC 1 cut(s) 891
Hin1II CATG 5 cut(s) 424, 730, 805, 958, 1249
Hin6I GCGC 1 cut(s) 12
HinP1I GCGC 1 cut(s) 12
HinfI GANTC 8 cut(s) 263, 524, 656, 805, 819, 945, 1252, 1268
HpaII CCGG 6 cut(s) 15, 143, 160, 739, 1038, 1106
HphI GGTGA 3 cut(s) 494, 918, 980
Hpy166II GTNNAC 1 cut(s) 1237
Hpy188I TCNGA 3 cut(s) 238, 950, 1051
Hpy8I GTNNAC 1 cut(s) 1237
Hpy99I CGWCG 1 cut(s) 307
HpyCH4III ACNGT 3 cut(s) 115, 193, 1023
HpyCH4IV ACGT 3 cut(s) 434, 478, 617
HpyCH4V TGCA 9 cut(s) 4, 521, 692, 878, 922, 1099, 1124, 1130, 1201
HpyF10VI GCNNNNNNNGC 5 cut(s) 416, 689, 721, 1136, 1175
HpyF3I CTNAG 1 cut(s) 1140
HpySE526I ACGT 3 cut(s) 434, 478, 617
Hsp92I GRCGYC 1 cut(s) 891
Hsp92II CATG 5 cut(s) 424, 730, 805, 958, 1249
HspAI GCGC 1 cut(s) 12
Kpn2I TCCGGA 1 cut(s) 738
KpnI GGTACC 1 cut(s) 1008
Ksp22I TGATCA 1 cut(s) 106
KspI CCGCGG 1 cut(s) 214
Kzo9I GATC 4 cut(s) 36, 55, 106, 368
LguI GCTCTTC 1 cut(s) 306
LmnI GCTCC 5 cut(s) 75, 343, 407, 448, 760
Lsp1109I GCAGC 4 cut(s) 403, 676, 704, 1204
LweI GCATC 1 cut(s) 403
MaeI CTAG 2 cut(s) 632, 1113
MaeII ACGT 3 cut(s) 434, 478, 617
MaeIII GTNAC 1 cut(s) 968
MalI GATC 4 cut(s) 38, 57, 108, 370
MbiI CCGCTC 1 cut(s) 346
MboI GATC 4 cut(s) 36, 55, 106, 368
MboII GAAGA 8 cut(s) 67, 323, 502, 563, 814, 1247, 1261, 1263
MfeI CAATTG 1 cut(s) 1032
MhlI GDGCHC 1 cut(s) 507
MluCI AATT 7 cut(s) 298, 556, 598, 664, 699, 783, 1032
MlyI GAGTC 2 cut(s) 939, 1277
MmeI TCCRAC 1 cut(s) 973
MroI TCCGGA 1 cut(s) 738
MseI TTAA 1 cut(s) 1118
MspA1I CMGCKG 2 cut(s) 213, 695
MspI CCGG 6 cut(s) 15, 143, 160, 739, 1038, 1106
MspR9I CCNGG 3 cut(s) 160, 278, 759
MunI CAATTG 1 cut(s) 1032
Mva1269I GAATGC 2 cut(s) 922, 985
MvaI CCWGG 2 cut(s) 278, 759
MvnI CGCG 2 cut(s) 12, 213
MwoI GCNNNNNNNGC 5 cut(s) 416, 689, 721, 1136, 1175
NciI CCSGG 1 cut(s) 160
NcoI CCATGG 2 cut(s) 420, 726
NdeII GATC 4 cut(s) 36, 55, 106, 368
NlaIII CATG 5 cut(s) 424, 730, 805, 958, 1249
NlaIV GGNNCC 3 cut(s) 582, 867, 1006
NmeAIII GCCGAG 1 cut(s) 60
NmuCI GTSAC 1 cut(s) 968
NotI GCGGCCGC 1 cut(s) 208
PaeR7I CTCGAG 1 cut(s) 449
PagI TCATGA 1 cut(s) 1245
PciSI GCTCTTC 1 cut(s) 306
PctI GAATGC 2 cut(s) 922, 985
PfeI GAWTC 6 cut(s) 263, 524, 656, 805, 819, 1252
PflFI GACNNNGTC 1 cut(s) 160
PleI GAGTC 2 cut(s) 939, 1276
PpsI GAGTC 2 cut(s) 939, 1276
Ppu21I YACGTR 2 cut(s) 479, 618
Psp124BI GAGCTC 1 cut(s) 507
Psp1406I AACGTT 1 cut(s) 434
Psp6I CCWGG 2 cut(s) 276, 757
PspFI CCCAGC 1 cut(s) 1190
PspGI CCWGG 2 cut(s) 276, 757
PspN4I GGNNCC 3 cut(s) 582, 867, 1006
PstI CTGCAG 1 cut(s) 694
PsyI GACNNNGTC 1 cut(s) 160
PvuII CAGCTG 1 cut(s) 695
RsaI GTAC 4 cut(s) 470, 620, 1006, 1238
RsaNI GTAC 4 cut(s) 469, 619, 1005, 1237
SacI GAGCTC 1 cut(s) 507
SacII CCGCGG 1 cut(s) 214
SapI GCTCTTC 1 cut(s) 306
SaqAI TTAA 1 cut(s) 1118
Sau3AI GATC 4 cut(s) 36, 55, 106, 368
SchI GAGTC 2 cut(s) 939, 1277
ScrFI CCNGG 3 cut(s) 160, 278, 759
SduI GDGCHC 1 cut(s) 507
SfaNI GCATC 1 cut(s) 403
SfcI CTRYAG 1 cut(s) 690
Sfr274I CTCGAG 1 cut(s) 449
Sfr303I CCGCGG 1 cut(s) 214
SgrBI CCGCGG 1 cut(s) 214
SlaI CTCGAG 1 cut(s) 449
SmlI CTYRAG 2 cut(s) 449, 528
SmoI CTYRAG 2 cut(s) 449, 528
SnaBI TACGTA 1 cut(s) 618
Sse9I AATT 7 cut(s) 298, 556, 598, 664, 699, 783, 1032
SspI AATATT 1 cut(s) 568
SspMI CTAG 2 cut(s) 632, 1113
SstI GAGCTC 1 cut(s) 507
StyD4I CCNGG 3 cut(s) 158, 276, 757
StyI CCWWGG 2 cut(s) 420, 726
TaaI ACNGT 3 cut(s) 115, 193, 1023
TaiI ACGT 3 cut(s) 437, 481, 620
TaqI TCGA 2 cut(s) 302, 450
TasI AATT 7 cut(s) 298, 556, 598, 664, 699, 783, 1032
TatI WGTACW 1 cut(s) 468
TauI GCSGC 7 cut(s) 52, 87, 90, 210, 213, 323, 1058
TfiI GAWTC 6 cut(s) 263, 524, 656, 805, 819, 1252
Tru1I TTAA 1 cut(s) 1118
Tru9I TTAA 1 cut(s) 1118
TseFI GTSAC 1 cut(s) 968
TseI GCWGC 4 cut(s) 416, 689, 692, 1217
Tsp45I GTSAC 1 cut(s) 968
TspDTI ATGAA 5 cut(s) 395, 971, 1234, 1262, 1263
Tth111I GACNNNGTC 1 cut(s) 160
XapI RAATTY 3 cut(s) 298, 556, 664
XhoI CTCGAG 1 cut(s) 449
XspI CTAG 2 cut(s) 632, 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.