AT5G66560

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0006338
Physical Location & Seq
Forward (+)
26564188 .. 26566853
2666 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G66560.2

Sequence Viewer

Length: 2007 bp
ATGGCGTCAGAGAAATCTACCTCCAAGGGCCAAGCATGGTTTTGTACGACTGGGTTACCTAGTGACATTGAAATCGAAGTTGATGACATGACATTCCATCTCCATAAGTTTCCACTCATGTCAAAGAGCAGGAAACTTCACAGGTTGATTACAGAGCAAGAGACTAGATCTTCCTCTTCCATGGCGCTGATAACTGTAATAGACCCAAAAGTAGAAGAGACTGACAAGAAAGGTAAAGGCCATGAAATCGAGGACGATAAAGAAGAAGAAGAAGTGGAAGAGCAGGAGATCGAAGAAAATGGTTATCCTCACATCAAACTCGAGGATTTTCCCGGTAGTTCAGAGAGCTTTGAGATGGTGGCGAAGTTCTGCTACGGCGTCAAGATGGACCTCTCTGCTTCCACCGTTGTTCCACTTCGTTGCGCCGCCGAACACCTCGAAATGACGGAAGAGTATTCACCAGATAACCTAATTTCCAAGACTGAGAGGTTTCTCTCTCATTCCGTCTACAAGAGCTTGCGTGAATCCATTAAAGCTCTCAAAGCTTGTGAGTCAGTCTCTCCTTTAGCCGGATCGCTTGGTATAACGGAACAGTGCATCGACTCTATAGTCTCCAGAGCTTCCTCAGCTGATCCTTCACTCTTCGGTTGGCCAGTAAACGATGGCGGCGGAAGAGGAAACATCTCCGCCACCGATCTGCAACTTATACCCGGCGGCGCGGCGAAATCTCGAAAGAAACCGAGTAGAGATTCGAACATGGAGCTGTGGTTTGAAGATCTGACGCAACTGAGTCTTCCGATCTTCAAAACTGTGATCCTATCAATGAGATCAGGAGATCTGAGCTCCGATATCATAGAGAGCTGTTTGATTTGTTACGCTAAGAAGCACATTCCCGGGATTCTACGTTCTAACCGGAAACCGCCATCGTCATCTTCAACCGCAGTTTCAGAGAATGAACAGAGAGAACTACTGGAAACAATAACCTCTAATCTTCCATTAGATAAAAGCTCCATCTCCTCAACAACGAGATTCCTCTTCGGCTTATTACGAACCGCAATCATCCTCAACGCCGCCGAGATTTGCCGTGATCTGCTGGAGAGAAAGATCGGATCGCAGCTAGAGAGAGCCACGCTCGACGATTTGCTCGTCCCTAGCTACTCATACCTCAACGAGACTTTATACGATGTTGATTTGGTAGAGAGAATCTTAGGCCACTTTCTCGACACCTTGGAACAATCCAACACCGCCATAGTCGAAGTTGACGGAAAATCTCCGTCGCTGATGCTCGTCGGGAAATTAATCGACGGATTTCTCGCGGAGATCGCATCGGACGCTAATCTCAAATCGGATAAGTTCTACAATCTAGCCATCTCACTCCCAGATCAAGCTCGTCTCTATGATGACGGACTTTACAGAGCCGTCGACGTATATCTCAAGGCGCATCCATGGGTATCGGAAGCAGAGAGAGAGAAAATATGCGGCGTGATGGATTGTCAGAAACTGACGTTGGAAGCGTGCACACACGCCGCGCAAAACGAGCGGCTTCCGCTACGAGCCGTCGTACAAGTTCTCTTCTTCGAGCAGTTACAACTCCGGCACGCGATCGCCGGGACGTTATTAGCTGCTCAATCGCCGTCTACGTCACAGTCAACGGAGCCAAGACCGTCAGCGGCAATAAGGAATCTAACGATAACGGAAGAGGACGGTGATGAAGCGGAAGGAGAAAGACAGGTGGACGCTGGGAAATGGAAGAAGACGGTTAGAGAGAATCAGGTGCTTCGCTTGGATATGGATACGATGAGGACGCGTGTTCATCGGTTAGAGAGAGAGTGCTCGAACATGAAGAAAGTGATCGCGAAGATTGATAAGGAAGGTTCATCACCGGCGACGACGACTGATCGGCCGAGAAGTTGGTCGATTACCAAAAAATTCGGATGTAAATTCAAGACACAGGTCTGCGATTCACACGAAGCAACGATGGTTGATCATAGATCACGACGGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

668

Amino Acids

74.54

Weight (kDa)

5.39

Isoelectric Point (pI)

53.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 254 - 479 2e-70 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 608
AccBSI CCGCTC 1 cut(s) 1540
AccI GTMKAC 3 cut(s) 507, 1422, 1637
AccII CGCG 6 cut(s) 719, 1316, 1529, 1601, 1807, 1856
AclWI GGATC 4 cut(s) 580, 626, 808, 1117
AcoI YGGCCR 2 cut(s) 650, 1901
AcsI RAATTY 2 cut(s) 1928, 1940
AcyI GRCGYC 2 cut(s) 5, 378
AfaI GTAC 2 cut(s) 46, 1563
AfiI CCNNNNNNNGG 1 cut(s) 569
AflIII ACRYGT 1 cut(s) 1805
AgsI TTSAA 5 cut(s) 71, 773, 805, 936, 1945
AjuI GAANNNNNNNTTGG 2 cut(s) 1490, 1522
AloI GAACNNNNNNTCC 2 cut(s) 889, 921
Alw21I GWGCWC 3 cut(s) 845, 1520, 1835
Alw26I GTCTC 6 cut(s) 155, 212, 562, 616, 1166, 1397
Alw44I GTGCAC 1 cut(s) 1516
AlwI GGATC 4 cut(s) 580, 626, 808, 1117
AlwNI CAGNNNCTG 1 cut(s) 1501
Ama87I CYCGRG 2 cut(s) 320, 893
AoxI GGCC 5 cut(s) 28, 238, 650, 1210, 1901
ApaLI GTGCAC 1 cut(s) 1516
ApeKI GCWGC 2 cut(s) 1114, 1622
ApoI RAATTY 2 cut(s) 1928, 1940
AseI ATTAAT 1 cut(s) 1298
AsiSI GCGATCGC 1 cut(s) 1605
AspLEI GCGC 5 cut(s) 187, 425, 719, 1441, 1531
AspS9I GGNCC 2 cut(s) 28, 388
AsuC2I CCSGG 5 cut(s) 333, 711, 894, 895, 1609
AsuHPI GGTGA 3 cut(s) 450, 1718, 1872
AsuII TTCGAA 1 cut(s) 752
AvaI CYCGRG 2 cut(s) 320, 893
AvaII GGWCC 1 cut(s) 388
BaeGI GKGCMC 1 cut(s) 1520
BalI TGGCCA 1 cut(s) 652
BanII GRGCYC 1 cut(s) 845
BarI GAAGNNNNNNTAC 2 cut(s) 356, 388
BbsI GAAGAC 2 cut(s) 785, 1760
Bbv12I GWGCWC 3 cut(s) 845, 1520, 1835
BbvCI CCTCAGC 1 cut(s) 625
BbvI GCAGC 2 cut(s) 1126, 1609
BccI CCATC 9 cut(s) 105, 349, 379, 656, 931, 1019, 1376, 1480, 1972
BceAI ACGGC 5 cut(s) 391, 1068, 1403, 1541, 1618
BciVI GTATCC 1 cut(s) 1786
BclI TGATCA 1 cut(s) 1984
BcnI CCSGG 5 cut(s) 333, 711, 894, 895, 1609
BcoDI GTCTC 6 cut(s) 155, 212, 562, 616, 1166, 1397
BfaI CTAG 5 cut(s) 60, 165, 1118, 1152, 1364
BfmI CTRYAG 1 cut(s) 606
BfoI RGCGCY 1 cut(s) 188
BfuI GTATCC 1 cut(s) 1786
BglII AGATCT 3 cut(s) 167, 775, 835
Bme1390I CCNGG 5 cut(s) 333, 711, 894, 895, 1609
Bme18I GGWCC 1 cut(s) 388
BmeT110I CYCGRG 2 cut(s) 320, 893
BmgT120I GGNCC 2 cut(s) 28, 388
BmiI GGNNCC 1 cut(s) 1656
BmrFI CCNGG 5 cut(s) 333, 711, 894, 895, 1609
BmrI ACTGGG 1 cut(s) 60
BmsI GCATC 4 cut(s) 606, 1272, 1334, 1450
BmuI ACTGGG 1 cut(s) 60
BoxI GACNNNNGTC 1 cut(s) 1952
BpiI GAAGAC 2 cut(s) 785, 1760
BplI GAGNNNNNCTC 4 cut(s) 542, 574, 1116, 1148
BpmI CTGGAG 2 cut(s) 598, 1115
Bpu10I CCTNAGC 1 cut(s) 625
Bpu14I TTCGAA 1 cut(s) 752
BpuEI CTTGAG 1 cut(s) 1418
BpuMI CCSGG 5 cut(s) 333, 711, 894, 895, 1609
BsaHI GRCGYC 2 cut(s) 5, 378
BsaJI CCNNGG 5 cut(s) 24, 180, 893, 1227, 1445
BsaWI WCCGGW 1 cut(s) 912
BsaXI ACNNNNNCTCC 2 cut(s) 752, 782
Bsc4I CCNNNNNNNGG 1 cut(s) 569
Bse118I RCCGGY 1 cut(s) 1882
Bse1I ACTGG 3 cut(s) 55, 653, 975
BseDI CCNNGG 5 cut(s) 24, 180, 893, 1227, 1445
BseGI GGATG 3 cut(s) 1059, 1441, 1940
BseLI CCNNNNNNNGG 1 cut(s) 569
BseMII CTCAG 4 cut(s) 474, 639, 779, 830
BseNI ACTGG 3 cut(s) 55, 653, 975
BseRI GAGGAG 1 cut(s) 1006
BseSI GKGCMC 1 cut(s) 1520
BseX3I CGGCCG 1 cut(s) 1901
BseXI GCAGC 2 cut(s) 1126, 1609
BseYI CCCAGC 1 cut(s) 1739
Bsh1236I CGCG 6 cut(s) 719, 1316, 1529, 1601, 1807, 1856
Bsh1285I CGRYCG 2 cut(s) 1605, 1904
BshFI GGCC 5 cut(s) 30, 240, 652, 1212, 1903
BsiEI CGRYCG 2 cut(s) 1605, 1904
BsiHKAI GWGCWC 3 cut(s) 845, 1520, 1835
BsiHKCI CYCGRG 2 cut(s) 320, 893
BsiSI CCGG 8 cut(s) 333, 570, 711, 894, 913, 1594, 1608, 1883
BslFI GGGAC 2 cut(s) 1133, 1624
BslI CCNNNNNNNGG 1 cut(s) 569
BsmAI GTCTC 6 cut(s) 155, 212, 562, 616, 1166, 1397
BsmBI CGTCTC 1 cut(s) 1397
BsmFI GGGAC 2 cut(s) 1133, 1624
BsnI GGCC 5 cut(s) 30, 240, 652, 1212, 1903
BsoBI CYCGRG 2 cut(s) 320, 893
Bsp119I TTCGAA 1 cut(s) 752
Bsp1286I GDGCHC 3 cut(s) 845, 1520, 1835
Bsp19I CCATGG 2 cut(s) 180, 1445
Bsp68I TCGCGA 1 cut(s) 1856
BspANI GGCC 5 cut(s) 30, 240, 652, 1212, 1903
BspCNI CTCAG 4 cut(s) 475, 638, 780, 831
BspFNI CGCG 6 cut(s) 719, 1316, 1529, 1601, 1807, 1856
BspLI GGNNCC 1 cut(s) 1656
BspPI GGATC 4 cut(s) 580, 626, 808, 1117
BspQI GCTCTTC 1 cut(s) 273
BspT104I TTCGAA 1 cut(s) 752
BsrBI CCGCTC 1 cut(s) 1540
BsrFI RCCGGY 1 cut(s) 1882
BsrI ACTGG 3 cut(s) 55, 653, 975
BssAI RCCGGY 1 cut(s) 1882
BssECI CCNNGG 5 cut(s) 24, 180, 893, 1227, 1445
BssNI GRCGYC 2 cut(s) 5, 378
BssT1I CCWWGG 4 cut(s) 24, 180, 1227, 1445
Bst4CI ACNGT 9 cut(s) 196, 406, 594, 811, 1647, 1665, 1706, 1759, 2001
Bst6I CTCTTC 9 cut(s) 181, 210, 273, 444, 647, 667, 1040, 1577, 1692
BstACI GRCGYC 2 cut(s) 5, 378
BstBI TTCGAA 1 cut(s) 752
BstC8I GCNNGC 3 cut(s) 518, 1516, 1599
BstDEI CTNAG 6 cut(s) 483, 625, 788, 839, 879, 1207
BstDSI CCRYGG 2 cut(s) 180, 1445
BstEII GGTNACC 1 cut(s) 54
BstF5I GGATG 3 cut(s) 1059, 1441, 1940
BstFNI CGCG 6 cut(s) 719, 1316, 1529, 1601, 1807, 1856
BstH2I RGCGCY 1 cut(s) 188
BstHHI GCGC 5 cut(s) 187, 425, 719, 1441, 1531
BstMAI GTCTC 6 cut(s) 155, 212, 562, 616, 1166, 1397
BstMCI CGRYCG 2 cut(s) 1605, 1904
BstMWI GCNNNNNNNGC 6 cut(s) 542, 626, 1322, 1331, 1537, 1546
BstPAI GACNNNNGTC 1 cut(s) 1952
BstPI GGTNACC 1 cut(s) 54
BstSCI CCNGG 5 cut(s) 331, 709, 892, 893, 1607
BstSFI CTRYAG 1 cut(s) 606
BstSLI GKGCMC 1 cut(s) 1520
BstUI CGCG 6 cut(s) 719, 1316, 1529, 1601, 1807, 1856
BstV1I GCAGC 2 cut(s) 1126, 1609
BstV2I GAAGAC 2 cut(s) 785, 1760
BstX2I RGATCY 3 cut(s) 167, 775, 835
BstYI RGATCY 3 cut(s) 167, 775, 835
BstZI CGGCCG 1 cut(s) 1901
BsuI GTATCC 1 cut(s) 1786
BsuRI GGCC 5 cut(s) 30, 240, 652, 1212, 1903
BtgI CCRYGG 2 cut(s) 180, 1445
BtsCI GGATG 3 cut(s) 1059, 1441, 1940
BtsIMutI CAGTG 1 cut(s) 599
BtuMI TCGCGA 1 cut(s) 1856
Cac8I GCNNGC 3 cut(s) 518, 1516, 1599
CaiI CAGNNNCTG 1 cut(s) 1501
CfoI GCGC 5 cut(s) 187, 425, 719, 1441, 1531
Cfr10I RCCGGY 1 cut(s) 1882
Cfr13I GGNCC 2 cut(s) 28, 388
Cfr9I CCCGGG 1 cut(s) 893
CseI GACGC 5 cut(s) 367, 790, 1340, 1745, 1813
Csp6I GTAC 2 cut(s) 45, 1562
CviAII CATG 8 cut(s) 36, 88, 118, 181, 242, 757, 1446, 1840
CviQI GTAC 2 cut(s) 45, 1562
DdeI CTNAG 6 cut(s) 483, 625, 788, 839, 879, 1207
DrdI GACNNNNNNGTC 1 cut(s) 608
DseDI GACNNNNNNGTC 1 cut(s) 608
EaeI YGGCCR 2 cut(s) 650, 1901
EagI CGGCCG 1 cut(s) 1901
Eam1104I CTCTTC 9 cut(s) 181, 210, 273, 444, 647, 667, 1040, 1577, 1692
EarI CTCTTC 9 cut(s) 181, 210, 273, 444, 647, 667, 1040, 1577, 1692
EciI GGCGGA 2 cut(s) 676, 684
Ecl136II GAGCTC 1 cut(s) 843
EclXI CGGCCG 1 cut(s) 1901
Eco130I CCWWGG 4 cut(s) 24, 180, 1227, 1445
Eco24I GRGCYC 1 cut(s) 845
Eco32I GATATC 1 cut(s) 850
Eco47I GGWCC 1 cut(s) 388
Eco52I CGGCCG 1 cut(s) 1901
Eco53kI GAGCTC 1 cut(s) 843
Eco88I CYCGRG 2 cut(s) 320, 893
Eco91I GGTNACC 1 cut(s) 54
EcoICRI GAGCTC 1 cut(s) 843
EcoO65I GGTNACC 1 cut(s) 54
EcoRV GATATC 1 cut(s) 850
EcoT14I CCWWGG 4 cut(s) 24, 180, 1227, 1445
EcoT38I GRGCYC 1 cut(s) 845
ErhI CCWWGG 4 cut(s) 24, 180, 1227, 1445
Esp3I CGTCTC 1 cut(s) 1397
FaeI CATG 8 cut(s) 39, 91, 121, 184, 245, 760, 1449, 1843
FaqI GGGAC 2 cut(s) 1133, 1624
FatI CATG 8 cut(s) 35, 87, 117, 180, 241, 756, 1445, 1839
FbaI TGATCA 1 cut(s) 1984
FblI GTMKAC 3 cut(s) 507, 1422, 1637
FokI GGATG 3 cut(s) 1046, 1428, 1947
FriOI GRGCYC 1 cut(s) 845
FspBI CTAG 5 cut(s) 60, 165, 1118, 1152, 1364
GlaI GCGC 5 cut(s) 186, 424, 718, 1440, 1530
GsaI CCCAGC 1 cut(s) 1743
GsuI CTGGAG 2 cut(s) 598, 1115
HaeII RGCGCY 1 cut(s) 188
HaeIII GGCC 5 cut(s) 30, 240, 652, 1212, 1903
HapII CCGG 8 cut(s) 333, 570, 711, 894, 913, 1594, 1608, 1883
HgaI GACGC 5 cut(s) 367, 790, 1340, 1745, 1813
HhaI GCGC 5 cut(s) 187, 425, 719, 1441, 1531
Hin1I GRCGYC 2 cut(s) 5, 378
Hin1II CATG 8 cut(s) 39, 91, 121, 184, 245, 760, 1449, 1843
Hin6I GCGC 5 cut(s) 185, 423, 717, 1439, 1529
HinP1I GCGC 5 cut(s) 185, 423, 717, 1439, 1529
HincII GTYRAC 3 cut(s) 1261, 1423, 1650
HindII GTYRAC 3 cut(s) 1261, 1423, 1650
HindIII AAGCTT 1 cut(s) 543
HpaII CCGG 8 cut(s) 333, 570, 711, 894, 913, 1594, 1608, 1883
HphI GGTGA 3 cut(s) 450, 1718, 1872
Hpy166II GTNNAC 8 cut(s) 508, 658, 1261, 1423, 1518, 1638, 1650, 1735
Hpy8I GTNNAC 8 cut(s) 508, 658, 1261, 1423, 1518, 1638, 1650, 1735
HpyAV CCTTC 3 cut(s) 645, 1712, 1865
HpyCH4III ACNGT 9 cut(s) 196, 406, 594, 811, 1647, 1665, 1706, 1759, 2001
HpyCH4IV ACGT 5 cut(s) 904, 1425, 1505, 1613, 1640
HpyCH4V TGCA 3 cut(s) 597, 700, 1518
HpyF10VI GCNNNNNNNGC 6 cut(s) 542, 626, 1322, 1331, 1537, 1546
HpyF3I CTNAG 6 cut(s) 483, 625, 788, 839, 879, 1207
HpySE526I ACGT 5 cut(s) 904, 1425, 1505, 1613, 1640
Hsp92I GRCGYC 2 cut(s) 5, 378
Hsp92II CATG 8 cut(s) 39, 91, 121, 184, 245, 760, 1449, 1843
HspAI GCGC 5 cut(s) 185, 423, 717, 1439, 1529
Ksp22I TGATCA 1 cut(s) 1984
LguI GCTCTTC 1 cut(s) 273
LmnI GCTCC 4 cut(s) 760, 848, 1013, 1654
Lsp1109I GCAGC 2 cut(s) 1126, 1609
LweI GCATC 4 cut(s) 606, 1272, 1334, 1450
MaeI CTAG 5 cut(s) 60, 165, 1118, 1152, 1364
MaeII ACGT 5 cut(s) 904, 1425, 1505, 1613, 1640
MaeIII GTNAC 5 cut(s) 54, 62, 872, 1584, 1641
MbiI CCGCTC 1 cut(s) 1540
MflI RGATCY 3 cut(s) 167, 775, 835
MhlI GDGCHC 3 cut(s) 845, 1520, 1835
MlsI TGGCCA 1 cut(s) 652
MluCI AATT 4 cut(s) 471, 1295, 1928, 1940
MluI ACGCGT 1 cut(s) 1805
MluNI TGGCCA 1 cut(s) 652
MlyI GAGTC 3 cut(s) 560, 596, 799
MmeI TCCRAC 2 cut(s) 1263, 1488
Mox20I TGGCCA 1 cut(s) 652
MscI TGGCCA 1 cut(s) 652
MseI TTAA 2 cut(s) 531, 1298
Msp20I TGGCCA 1 cut(s) 652
MspA1I CMGCKG 2 cut(s) 629, 1670
MspI CCGG 8 cut(s) 333, 570, 711, 894, 913, 1594, 1608, 1883
MspR9I CCNGG 5 cut(s) 333, 711, 894, 895, 1609
MvnI CGCG 6 cut(s) 719, 1316, 1529, 1601, 1807, 1856
MwoI GCNNNNNNNGC 6 cut(s) 542, 626, 1322, 1331, 1537, 1546
NciI CCSGG 5 cut(s) 333, 711, 894, 895, 1609
NcoI CCATGG 2 cut(s) 180, 1445
NlaIII CATG 8 cut(s) 39, 91, 121, 184, 245, 760, 1449, 1843
NlaIV GGNNCC 1 cut(s) 1656
NmeAIII GCCGAG 2 cut(s) 1099, 1929
NmuCI GTSAC 2 cut(s) 62, 1641
NruI TCGCGA 1 cut(s) 1856
NspV TTCGAA 1 cut(s) 752
PaeR7I CTCGAG 1 cut(s) 320
PciSI GCTCTTC 1 cut(s) 273
PcsI WCGNNNNNNNCGW 3 cut(s) 1143, 1511, 1637
PfeI GAWTC 8 cut(s) 524, 749, 898, 1029, 1203, 1681, 1768, 1961
Ple19I CGATCG 1 cut(s) 1605
PleI GAGTC 3 cut(s) 559, 596, 798
PpsI GAGTC 3 cut(s) 559, 596, 798
PshAI GACNNNNGTC 1 cut(s) 1952
PshBI ATTAAT 1 cut(s) 1298
Psp124BI GAGCTC 1 cut(s) 845
PspEI GGTNACC 1 cut(s) 54
PspFI CCCAGC 1 cut(s) 1739
PspN4I GGNNCC 1 cut(s) 1656
PspPI GGNCC 2 cut(s) 28, 388
PspXI VCTCGAGB 1 cut(s) 320
PstNI CAGNNNCTG 1 cut(s) 1501
PsuI RGATCY 3 cut(s) 167, 775, 835
PvuI CGATCG 1 cut(s) 1605
PvuII CAGCTG 1 cut(s) 629
RgaI GCGATCGC 1 cut(s) 1605
RruI TCGCGA 1 cut(s) 1856
RsaI GTAC 2 cut(s) 46, 1563
RsaNI GTAC 2 cut(s) 45, 1562
SacI GAGCTC 1 cut(s) 845
SalI GTCGAC 1 cut(s) 1421
SapI GCTCTTC 1 cut(s) 273
SaqAI TTAA 2 cut(s) 531, 1298
Sau96I GGNCC 2 cut(s) 28, 388
SchI GAGTC 3 cut(s) 560, 596, 799
ScrFI CCNGG 5 cut(s) 333, 711, 894, 895, 1609
SduI GDGCHC 3 cut(s) 845, 1520, 1835
SfaAI GCGATCGC 1 cut(s) 1605
SfaNI GCATC 4 cut(s) 606, 1272, 1334, 1450
SfcI CTRYAG 1 cut(s) 606
Sfr274I CTCGAG 1 cut(s) 320
SfuI TTCGAA 1 cut(s) 752
SgfI GCGATCGC 1 cut(s) 1605
SgrAI CRCCGGYG 1 cut(s) 1882
SgrDI CGTCGACG 1 cut(s) 1421
SinI GGWCC 1 cut(s) 388
SlaI CTCGAG 1 cut(s) 320
SmaI CCCGGG 1 cut(s) 895
SmlI CTYRAG 2 cut(s) 320, 1433
SmoI CTYRAG 2 cut(s) 320, 1433
Sse9I AATT 4 cut(s) 471, 1295, 1928, 1940
SspMI CTAG 5 cut(s) 60, 165, 1118, 1152, 1364
SstI GAGCTC 1 cut(s) 845
StyD4I CCNGG 5 cut(s) 331, 709, 892, 893, 1607
StyI CCWWGG 4 cut(s) 24, 180, 1227, 1445
TaaI ACNGT 9 cut(s) 196, 406, 594, 811, 1647, 1665, 1706, 1759, 2001
TaiI ACGT 5 cut(s) 907, 1428, 1508, 1616, 1643
TasI AATT 4 cut(s) 471, 1295, 1928, 1940
TauI GCSGC 9 cut(s) 428, 669, 717, 722, 1073, 1482, 1529, 1543, 1673
TfiI GAWTC 8 cut(s) 524, 749, 898, 1029, 1203, 1681, 1768, 1961
Tru1I TTAA 2 cut(s) 531, 1298
Tru9I TTAA 2 cut(s) 531, 1298
TscAI CASTG 1 cut(s) 599
TseFI GTSAC 2 cut(s) 62, 1641
TseI GCWGC 2 cut(s) 1114, 1622
Tsp45I GTSAC 2 cut(s) 62, 1641
TspDTI ATGAA 6 cut(s) 258, 969, 1725, 1802, 1856, 1866
TspGWI ACGGA 9 cut(s) 461, 493, 602, 1263, 1278, 1320, 1419, 1667, 1709
TspMI CCCGGG 1 cut(s) 893
TspRI CASTG 1 cut(s) 599
VneI GTGCAC 1 cut(s) 1516
VpaK11BI GGWCC 1 cut(s) 388
VspI ATTAAT 1 cut(s) 1298
XapI RAATTY 2 cut(s) 1928, 1940
XhoI CTCGAG 1 cut(s) 320
XmaI CCCGGG 1 cut(s) 893
XmiI GTMKAC 3 cut(s) 507, 1422, 1637
XspI CTAG 5 cut(s) 60, 165, 1118, 1152, 1364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.