FvH4_1g14470

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0006338
Physical Location & Seq
Reverse (-)
8080815 .. 8084977
4163 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g14470.t2

Sequence Viewer

Length: 2016 bp
ATGGAGATAACAGAAGCAGCTGAGAAATCAAGTTCCAAAGGCCAAGCATGGTTCTGCACAACTGGGTTACCAAGCGACATTGTGGTTGAAGTAGAAGACATGACCTTTCATCTTCACAAGTTCCCTCTCATGTCGAAAAGCCGAAAGCTTCACAACCTGATTGCAGAGCAAGAGGCCAACCCAACACACCCCCAACAAGAGCTAGAAGAAGAGCCAGACGAAATTGAAGAAGTGCAGTGTCAAATAGTCCTCCCAAACTTCCCGGGCGGCTCCGAGACCTTTGAAATCGCCGCTAAATTCTGCTACGGCGTCAAAATCGACCTCAACTCGACCAATGTGGGACCTCTCCGCTGCGCCGGAGAGTATCTAGAGATGACAGAAGAGTACTCCGAAGACAACCTCATCTCCAAAACCGAGAGGTTCCTGTCTCAAGCCGTGTTCAAGAGTTTCAAGGAGTCCATCAAAGCTCTCAAATCCTGCGAGCGCGTCATGCCACTCGCGGAGACGTTAGGCATTACACAGAGATGTATCGACTCCATAGCTAACAGAGCCACCAACGCCGATCCCAGCCTGTTTGGCTGGCCGGTCAATGAAGTCGCCCCGAATCCAAACTCATCCAAACACCAGATTCTGTGGAATGGGATTGACACTGGTGGAAGAAGAAAAGGGATTTCTAGAGCAAACCATCCAGATTCTTGGCTTGAAGATTTGGTCCTCTTAAGCCTCCCTTTCTTCAAGAGATTGATTCTAGCAATGAAGAGCGGAAATCTGAGTCGTGAAATGGTGGAGACTTGTTTGATGTATTACGCCAAGAAATACATCCCCGGAATCTCAAGATCGACCCGAAAGCCTTCTTCTTCCACCACCACAACTTCTGGCTCCTCTTTAGCTTCGGAGAGCCAACAGAGGGAGCTGTTGGAGACTATAATCTCGAACCTTCCATTGGAGAAGACACCAAGACCTTCAACGAATACAAGATTTCTATTTGGGTTGTTGAGAACGGCGAACATCTTGAACGCCTCGCAGGGGTGTAAAGCCGCATTGGAGAAGAAGATTGGGTCGCAGCTCGAGCAAGCTAGCTTGGACGATCTGCTCATTCCGAGCTATTCGTATCTGAATGAGACTCTATACGACGTCGACTGCGTGGAGAGGATTCTGGGGTATTTTCTGGACGGGTTAGAGAGGAACCGAAACAGAAACAGAGATGGGATTGAAGATGAAGATGAAGAGGAAGAGCGTGATATTGAATGCGCTACATCGCCGGCGCTGATGCTAGTCGGGAAACTAACCGACGAGTATCTGTCTGAGATTGCGTCGGATGCTAATTTGAAGCCGGATAGGTTCTACAACTTCGCAATGGCGCTGCCGGAGCGAGCGAGGCTGTTCGACGACGGGCTTTACAGAGCTGTGGATGTTTATCTCAAGGCGCATCCGTGGATATCGGAACCGGAGCGGGAGAAGATATGTGGGATTCTGGATTGCCAGAAGCTCACATTGGAGGCGTGCACTCACGCCGCCCAGAACGAGCGGCTGCCGCTGCGCGCCGTCGTACAGGTCTTGTTCTTCGAGCAGCTTCAGCTCCGTCACGCCATCGCCGGTACTCTGATAGCTGGGGAGGCTGCGCCGTTAGAGTCCAGTCGGCCCTCAGTGTTGCGACGAGAGGCGGAGAGTGAGGAGGAGGACGAGGAGGAGGAAGGTGGCGCGGTGGAGGTGCACGCGGAGGAAGGAGGCGGAGGCACGTGGAGGTCGGCTGTGAGGGAGAACCAGGTGCTGCGATTGGATATGGATAGCATGAGGACGCGGGTCCATCAGCTTGAGCGGGAGTGCTCCAACATGAAGAAGGTGATCGAAAAGATTGACAGTAAGCCGCCGGGTCAACCCGATGGGCGGACCGGATGGAAAGGGTCGTTGACCCGGCGGTTCGGGTGTAAGTTCAAGACCCAGGTGTGTGATTCGCACGAGCCGACGGTCGTGGAGGGGAGGAAAGGGCGGCGCCACCATCATCATCAACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

672

Amino Acids

75.54

Weight (kDa)

5.3

Isoelectric Point (pI)

52.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 188 - 459 7.6e-89 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1137
AccB1I GGYRCC 1 cut(s) 1992
AccBSI CCGCTC 4 cut(s) 762, 1453, 1528, 1819
AccI GTMKAC 1 cut(s) 1137
AccII CGCG 6 cut(s) 486, 500, 1542, 1703, 1718, 1801
AclWI GGATC 1 cut(s) 557
AcoI YGGCCR 1 cut(s) 581
AcsI RAATTY 1 cut(s) 296
AcuI CTGAAG 1 cut(s) 1559
AcvI CACGTG 1 cut(s) 1740
AcyI GRCGYC 3 cut(s) 309, 1134, 1993
AfaI GTAC 3 cut(s) 386, 1551, 1600
AfiI CCNNNNNNNGG 4 cut(s) 907, 943, 1026, 1887
AflII CTTAAG 1 cut(s) 718
AjnI CCWGG 2 cut(s) 1764, 1941
AjuI GAANNNNNNNTTGG 4 cut(s) 926, 958, 1478, 1510
Alw21I GWGCWC 3 cut(s) 1508, 1716, 1829
Alw26I GTCTC 6 cut(s) 269, 432, 497, 782, 914, 1115
Alw44I GTGCAC 2 cut(s) 1504, 1712
AlwI GGATC 1 cut(s) 557
AlwNI CAGNNNCTG 2 cut(s) 631, 1771
Ama87I CYCGRG 2 cut(s) 262, 1067
AoxI GGCC 4 cut(s) 40, 174, 581, 1640
ApaLI GTGCAC 2 cut(s) 1504, 1712
ApeKI GCWGC 9 cut(s) 17, 351, 1063, 1363, 1531, 1537, 1570, 1619, 1771
ApoI RAATTY 1 cut(s) 296
Asp700I GAANNNNTTC 1 cut(s) 850
AspS9I GGNCC 5 cut(s) 341, 712, 1641, 1804, 1890
AsuC2I CCSGG 5 cut(s) 263, 264, 825, 1872, 1915
AsuHPI GGTGA 1 cut(s) 1855
AsuNHI GCTAGC 1 cut(s) 1076
AvaI CYCGRG 2 cut(s) 262, 1067
AvaII GGWCC 4 cut(s) 341, 712, 1804, 1890
BaeGI GKGCMC 2 cut(s) 1508, 1716
BanI GGYRCC 1 cut(s) 1992
BauI CACGAG 1 cut(s) 1958
BbrPI CACGTG 1 cut(s) 1740
BbsI GAAGAC 3 cut(s) 102, 399, 956
Bbv12I GWGCWC 3 cut(s) 1508, 1716, 1829
BbvI GCAGC 9 cut(s) 29, 338, 1075, 1350, 1518, 1524, 1582, 1606, 1758
BccI CCATC 8 cut(s) 467, 693, 1199, 1598, 1815, 1877, 1890, 2007
BceAI ACGGC 5 cut(s) 322, 419, 1017, 1529, 1609
BciT130I CCWGG 2 cut(s) 1766, 1943
BcnI CCSGG 5 cut(s) 263, 264, 825, 1872, 1915
BcoDI GTCTC 6 cut(s) 269, 432, 497, 782, 914, 1115
BfaI CTAG 6 cut(s) 203, 368, 675, 749, 1077, 1274
BfoI RGCGCY 3 cut(s) 1268, 1364, 1996
BfrI CTTAAG 1 cut(s) 718
BglI GCCNNNNNGGC 1 cut(s) 576
BmcAI AGTACT 1 cut(s) 386
Bme1390I CCNGG 7 cut(s) 263, 264, 825, 1766, 1872, 1915, 1943
Bme18I GGWCC 4 cut(s) 341, 712, 1804, 1890
BmeT110I CYCGRG 2 cut(s) 262, 1067
BmgT120I GGNCC 5 cut(s) 341, 712, 1641, 1804, 1890
BmiI GGNNCC 8 cut(s) 271, 342, 422, 880, 1187, 1446, 1805, 1994
BmrFI CCNGG 7 cut(s) 263, 264, 825, 1766, 1872, 1915, 1943
BmrI ACTGGG 1 cut(s) 72
BmsI GCATC 3 cut(s) 1260, 1309, 1438
BmtI GCTAGC 1 cut(s) 1080
BmuI ACTGGG 1 cut(s) 72
BoxI GACNNNNGTC 1 cut(s) 1802
BpiI GAAGAC 3 cut(s) 102, 399, 956
BpuEI CTTGAG 4 cut(s) 414, 817, 1406, 1835
BpuMI CCSGG 5 cut(s) 263, 264, 825, 1872, 1915
BsaAI YACGTR 1 cut(s) 1740
BsaBI GATNNNNATC 1 cut(s) 1416
BsaHI GRCGYC 3 cut(s) 309, 1134, 1993
BsaI GGTCTC 1 cut(s) 269
BsaJI CCNNGG 4 cut(s) 262, 823, 1433, 1941
BsaWI WCCGGW 2 cut(s) 1447, 1892
BsaXI ACNNNNNCTCC 2 cut(s) 389, 419
Bsc4I CCNNNNNNNGG 4 cut(s) 907, 943, 1026, 1887
Bse118I RCCGGY 3 cut(s) 583, 1261, 1595
Bse1I ACTGG 3 cut(s) 67, 655, 1635
Bse3DI GCAATG 2 cut(s) 759, 1362
Bse8I GATNNNNATC 1 cut(s) 1416
BseBI CCWGG 2 cut(s) 1766, 1943
BseDI CCNNGG 4 cut(s) 262, 823, 1433, 1941
BseGI GGATG 7 cut(s) 614, 685, 819, 1324, 1417, 1429, 1901
BseJI GATNNNNATC 1 cut(s) 1416
BseLI CCNNNNNNNGG 4 cut(s) 907, 943, 1026, 1887
BseMI GCAATG 2 cut(s) 759, 1362
BseMII CTCAG 4 cut(s) 12, 761, 1296, 1659
BseNI ACTGG 3 cut(s) 67, 655, 1635
BsePI GCGCGC 1 cut(s) 1540
BseRI GAGGAG 5 cut(s) 871, 1688, 1691, 1700, 1703
BseSI GKGCMC 2 cut(s) 1508, 1716
BseXI GCAGC 9 cut(s) 29, 338, 1075, 1350, 1518, 1524, 1582, 1606, 1758
BseYI CCCAGC 2 cut(s) 566, 1610
BsgI GTGCAG 2 cut(s) 40, 254
Bsh1236I CGCG 6 cut(s) 486, 500, 1542, 1703, 1718, 1801
Bsh1285I CGRYCG 1 cut(s) 1971
BshFI GGCC 4 cut(s) 42, 176, 583, 1642
BshNI GGYRCC 1 cut(s) 1992
BsiEI CGRYCG 1 cut(s) 1971
BsiHKAI GWGCWC 3 cut(s) 1508, 1716, 1829
BsiHKCI CYCGRG 2 cut(s) 262, 1067
BslFI GGGAC 1 cut(s) 354
BslI CCNNNNNNNGG 4 cut(s) 907, 943, 1026, 1887
BsmAI GTCTC 6 cut(s) 269, 432, 497, 782, 914, 1115
BsmBI CGTCTC 1 cut(s) 497
BsmFI GGGAC 1 cut(s) 354
BsmI GAATGC 1 cut(s) 1253
BsnI GGCC 4 cut(s) 42, 176, 583, 1642
Bso31I GGTCTC 1 cut(s) 269
BsoBI CYCGRG 2 cut(s) 262, 1067
Bsp1286I GDGCHC 3 cut(s) 1508, 1716, 1829
Bsp143I GATC 4 cut(s) 562, 836, 1087, 1845
BspANI GGCC 4 cut(s) 42, 176, 583, 1642
BspCNI CTCAG 4 cut(s) 13, 762, 1297, 1658
BspFNI CGCG 6 cut(s) 486, 500, 1542, 1703, 1718, 1801
BspLI GGNNCC 8 cut(s) 271, 342, 422, 880, 1187, 1446, 1805, 1994
BspOI GCTAGC 1 cut(s) 1080
BspPI GGATC 1 cut(s) 557
BspQI GCTCTTC 3 cut(s) 204, 752, 1227
BspT107I GGYRCC 1 cut(s) 1992
BspTI CTTAAG 1 cut(s) 718
BspTNI GGTCTC 1 cut(s) 269
BsrBI CCGCTC 4 cut(s) 762, 1453, 1528, 1819
BsrDI GCAATG 2 cut(s) 759, 1362
BsrFI RCCGGY 3 cut(s) 583, 1261, 1595
BsrI ACTGG 3 cut(s) 67, 655, 1635
BssAI RCCGGY 3 cut(s) 583, 1261, 1595
BssECI CCNNGG 4 cut(s) 262, 823, 1433, 1941
BssHII GCGCGC 1 cut(s) 1540
BssMI GATC 4 cut(s) 562, 836, 1087, 1845
BssNI GRCGYC 3 cut(s) 309, 1134, 1993
BssSI CACGAG 1 cut(s) 1958
Bst2BI CACGAG 1 cut(s) 1958
Bst2UI CCWGG 2 cut(s) 1766, 1943
Bst4CI ACNGT 2 cut(s) 1862, 1969
Bst6I CTCTTC 5 cut(s) 204, 375, 752, 1221, 1227
BstACI GRCGYC 3 cut(s) 309, 1134, 1993
BstAFI CTTAAG 1 cut(s) 718
BstBAI YACGTR 1 cut(s) 1740
BstC8I GCNNGC 9 cut(s) 482, 581, 1074, 1078, 1263, 1374, 1504, 1542, 1716
BstDEI CTNAG 4 cut(s) 21, 770, 1305, 1645
BstDSI CCRYGG 1 cut(s) 1433
BstEII GGTNACC 1 cut(s) 66
BstF5I GGATG 7 cut(s) 614, 685, 819, 1324, 1417, 1429, 1901
BstFNI CGCG 6 cut(s) 486, 500, 1542, 1703, 1718, 1801
BstH2I RGCGCY 3 cut(s) 1268, 1364, 1996
BstKTI GATC 4 cut(s) 565, 839, 1090, 1848
BstMAI GTCTC 6 cut(s) 269, 432, 497, 782, 914, 1115
BstMBI GATC 4 cut(s) 562, 836, 1087, 1845
BstMCI CGRYCG 1 cut(s) 1971
BstNI CCWGG 2 cut(s) 1766, 1943
BstPAI GACNNNNGTC 1 cut(s) 1802
BstPI GGTNACC 1 cut(s) 66
BstSCI CCNGG 7 cut(s) 261, 262, 823, 1764, 1870, 1913, 1941
BstSLI GKGCMC 2 cut(s) 1508, 1716
BstUI CGCG 6 cut(s) 486, 500, 1542, 1703, 1718, 1801
BstV1I GCAGC 9 cut(s) 29, 338, 1075, 1350, 1518, 1524, 1582, 1606, 1758
BstV2I GAAGAC 3 cut(s) 102, 399, 956
BstXI CCANNNNNNTGG 1 cut(s) 696
BsuRI GGCC 4 cut(s) 42, 176, 583, 1642
BtgI CCRYGG 1 cut(s) 1433
BtgZI GCGATG 2 cut(s) 1242, 1576
BtsCI GGATG 7 cut(s) 614, 685, 819, 1324, 1417, 1429, 1901
BtsI GCAGTG 1 cut(s) 242
BtsIMutI CAGTG 3 cut(s) 242, 648, 1653
Cac8I GCNNGC 9 cut(s) 482, 581, 1074, 1078, 1263, 1374, 1504, 1542, 1716
CaiI CAGNNNCTG 2 cut(s) 631, 1771
Cfr10I RCCGGY 3 cut(s) 583, 1261, 1595
Cfr13I GGNCC 5 cut(s) 341, 712, 1641, 1804, 1890
Cfr9I CCCGGG 1 cut(s) 262
CpoI CGGWCCG 1 cut(s) 1890
CseI GACGC 4 cut(s) 298, 475, 1302, 1807
CsiI ACCWGGT 1 cut(s) 1764
Csp6I GTAC 3 cut(s) 385, 1550, 1599
CspI CGGWCCG 1 cut(s) 1890
CviAII CATG 6 cut(s) 48, 100, 130, 490, 1792, 1834
CviQI GTAC 3 cut(s) 385, 1550, 1599
DdeI CTNAG 4 cut(s) 21, 770, 1305, 1645
DinI GGCGCC 1 cut(s) 1994
DpnI GATC 4 cut(s) 564, 838, 1089, 1847
DpnII GATC 4 cut(s) 562, 836, 1087, 1845
EaeI YGGCCR 1 cut(s) 581
Eam1104I CTCTTC 5 cut(s) 204, 375, 752, 1221, 1227
EarI CTCTTC 5 cut(s) 204, 375, 752, 1221, 1227
EciI GGCGGA 3 cut(s) 1679, 1746, 1903
Eco31I GGTCTC 1 cut(s) 269
Eco32I GATATC 1 cut(s) 1440
Eco47I GGWCC 4 cut(s) 341, 712, 1804, 1890
Eco57I CTGAAG 1 cut(s) 1559
Eco72I CACGTG 1 cut(s) 1740
Eco88I CYCGRG 2 cut(s) 262, 1067
Eco91I GGTNACC 1 cut(s) 66
EcoO109I RGGNCCY 1 cut(s) 341
EcoO65I GGTNACC 1 cut(s) 66
EcoRII CCWGG 2 cut(s) 1764, 1941
EcoRV GATATC 1 cut(s) 1440
EgeI GGCGCC 1 cut(s) 1994
EheI GGCGCC 1 cut(s) 1994
Esp3I CGTCTC 1 cut(s) 497
FaeI CATG 6 cut(s) 51, 103, 133, 493, 1795, 1837
FalI AAGNNNNNCTT 2 cut(s) 712, 744
FaqI GGGAC 1 cut(s) 354
FatI CATG 6 cut(s) 47, 99, 129, 489, 1791, 1833
FauI CCCGC 3 cut(s) 1446, 1794, 1812
FblI GTMKAC 1 cut(s) 1137
FokI GGATG 7 cut(s) 601, 672, 806, 1331, 1416, 1424, 1908
FspBI CTAG 6 cut(s) 203, 368, 675, 749, 1077, 1274
GsaI CCCAGC 2 cut(s) 570, 1614
HaeII RGCGCY 3 cut(s) 1268, 1364, 1996
HaeIII GGCC 4 cut(s) 42, 176, 583, 1642
HgaI GACGC 4 cut(s) 298, 475, 1302, 1807
Hin1I GRCGYC 3 cut(s) 309, 1134, 1993
Hin1II CATG 6 cut(s) 51, 103, 133, 493, 1795, 1837
HincII GTYRAC 3 cut(s) 1138, 1877, 1911
HindII GTYRAC 3 cut(s) 1138, 1877, 1911
HindIII AAGCTT 1 cut(s) 146
HphI GGTGA 1 cut(s) 1855
Hpy166II GTNNAC 5 cut(s) 1138, 1506, 1714, 1877, 1911
Hpy8I GTNNAC 5 cut(s) 1138, 1506, 1714, 1877, 1911
Hpy99I CGWCG 9 cut(s) 1136, 1139, 1295, 1318, 1391, 1394, 1550, 1659, 1969
HpyAV CCTTC 6 cut(s) 861, 947, 972, 1688, 1718, 1834
HpyCH4III ACNGT 2 cut(s) 1862, 1969
HpyCH4IV ACGT 3 cut(s) 506, 1134, 1739
HpyCH4V TGCA 5 cut(s) 57, 164, 235, 1506, 1714
HpyF3I CTNAG 4 cut(s) 21, 770, 1305, 1645
HpySE526I ACGT 3 cut(s) 506, 1134, 1739
Hsp92I GRCGYC 3 cut(s) 309, 1134, 1993
Hsp92II CATG 6 cut(s) 51, 103, 133, 493, 1795, 1837
KasI GGCGCC 1 cut(s) 1992
KroI GCCGGC 1 cut(s) 1261
KroNI GCCGGC 1 cut(s) 1263
Kzo9I GATC 4 cut(s) 562, 836, 1087, 1845
LguI GCTCTTC 3 cut(s) 204, 752, 1227
LmnI GCTCC 7 cut(s) 275, 884, 910, 1369, 1450, 1584, 1832
Lsp1109I GCAGC 9 cut(s) 29, 338, 1075, 1350, 1518, 1524, 1582, 1606, 1758
LweI GCATC 3 cut(s) 1260, 1309, 1438
MabI ACCWGGT 1 cut(s) 1764
MaeI CTAG 6 cut(s) 203, 368, 675, 749, 1077, 1274
MaeII ACGT 3 cut(s) 506, 1134, 1739
MaeIII GTNAC 2 cut(s) 66, 1583
MalI GATC 4 cut(s) 564, 838, 1089, 1847
MbiI CCGCTC 4 cut(s) 762, 1453, 1528, 1819
MboI GATC 4 cut(s) 562, 836, 1087, 1845
MhlI GDGCHC 3 cut(s) 1508, 1716, 1829
MluCI AATT 3 cut(s) 222, 296, 1324
Mly113I GGCGCC 1 cut(s) 1993
MlyI GAGTC 5 cut(s) 464, 527, 781, 1117, 1640
MmeI TCCRAC 3 cut(s) 897, 1296, 1854
MreI CGCCGGCG 1 cut(s) 1261
MroNI GCCGGC 1 cut(s) 1261
MroXI GAANNNNTTC 1 cut(s) 850
MseI TTAA 1 cut(s) 719
MslI CAYNNNNRTG 1 cut(s) 523
MspA1I CMGCKG 3 cut(s) 20, 351, 1537
MspCI CTTAAG 1 cut(s) 718
MspR9I CCNGG 7 cut(s) 263, 264, 825, 1766, 1872, 1915, 1943
Mva1269I GAATGC 1 cut(s) 1253
MvaI CCWGG 2 cut(s) 1766, 1943
MvnI CGCG 6 cut(s) 486, 500, 1542, 1703, 1718, 1801
NaeI GCCGGC 1 cut(s) 1263
NarI GGCGCC 1 cut(s) 1993
NciI CCSGG 5 cut(s) 263, 264, 825, 1872, 1915
NdeII GATC 4 cut(s) 562, 836, 1087, 1845
NgoMIV GCCGGC 1 cut(s) 1261
NheI GCTAGC 1 cut(s) 1076
NlaIII CATG 6 cut(s) 51, 103, 133, 493, 1795, 1837
NlaIV GGNNCC 8 cut(s) 271, 342, 422, 880, 1187, 1446, 1805, 1994
NmuCI GTSAC 1 cut(s) 1583
PaeR7I CTCGAG 1 cut(s) 1067
PauI GCGCGC 1 cut(s) 1540
PciSI GCTCTTC 3 cut(s) 204, 752, 1227
PcsI WCGNNNNNNNCGW 2 cut(s) 1140, 1961
PctI GAATGC 1 cut(s) 1253
PdiI GCCGGC 1 cut(s) 1263
PdmI GAANNNNTTC 1 cut(s) 850
PfeI GAWTC 8 cut(s) 604, 628, 692, 745, 828, 1153, 1471, 1952
PleI GAGTC 5 cut(s) 463, 527, 780, 1117, 1639
PluTI GGCGCC 1 cut(s) 1996
PmaCI CACGTG 1 cut(s) 1740
PmlI CACGTG 1 cut(s) 1740
PpsI GAGTC 5 cut(s) 463, 527, 780, 1117, 1639
Ppu21I YACGTR 1 cut(s) 1740
PpuMI RGGWCCY 1 cut(s) 341
PshAI GACNNNNGTC 1 cut(s) 1802
Psp5II RGGWCCY 1 cut(s) 341
Psp6I CCWGG 2 cut(s) 1764, 1941
PspCI CACGTG 1 cut(s) 1740
PspEI GGTNACC 1 cut(s) 66
PspFI CCCAGC 2 cut(s) 566, 1610
PspGI CCWGG 2 cut(s) 1764, 1941
PspN4I GGNNCC 8 cut(s) 271, 342, 422, 880, 1187, 1446, 1805, 1994
PspPI GGNCC 5 cut(s) 341, 712, 1641, 1804, 1890
PspPPI RGGWCCY 1 cut(s) 341
PspXI VCTCGAGB 1 cut(s) 1067
PstNI CAGNNNCTG 2 cut(s) 631, 1771
PteI GCGCGC 1 cut(s) 1540
PvuII CAGCTG 1 cut(s) 20
RsaI GTAC 3 cut(s) 386, 1551, 1600
RsaNI GTAC 3 cut(s) 385, 1550, 1599
RseI CAYNNNNRTG 1 cut(s) 523
Rsr2I CGGWCCG 1 cut(s) 1890
RsrII CGGWCCG 1 cut(s) 1890
SalI GTCGAC 1 cut(s) 1136
SapI GCTCTTC 3 cut(s) 204, 752, 1227
SaqAI TTAA 1 cut(s) 719
Sau3AI GATC 4 cut(s) 562, 836, 1087, 1845
Sau96I GGNCC 5 cut(s) 341, 712, 1641, 1804, 1890
ScaI AGTACT 1 cut(s) 386
SchI GAGTC 5 cut(s) 464, 527, 781, 1117, 1640
ScrFI CCNGG 7 cut(s) 263, 264, 825, 1766, 1872, 1915, 1943
SduI GDGCHC 3 cut(s) 1508, 1716, 1829
SexAI ACCWGGT 1 cut(s) 1764
SfaNI GCATC 3 cut(s) 1260, 1309, 1438
SfoI GGCGCC 1 cut(s) 1994
Sfr274I CTCGAG 1 cut(s) 1067
SgrAI CRCCGGYG 1 cut(s) 1261
SinI GGWCC 4 cut(s) 341, 712, 1804, 1890
SlaI CTCGAG 1 cut(s) 1067
SmaI CCCGGG 1 cut(s) 264
SmiMI CAYNNNNRTG 1 cut(s) 523
SmlI CTYRAG 6 cut(s) 429, 718, 832, 1067, 1421, 1814
SmoI CTYRAG 6 cut(s) 429, 718, 832, 1067, 1421, 1814
Sse9I AATT 3 cut(s) 222, 296, 1324
SspDI GGCGCC 1 cut(s) 1992
SspMI CTAG 6 cut(s) 203, 368, 675, 749, 1077, 1274
StyD4I CCNGG 7 cut(s) 261, 262, 823, 1764, 1870, 1913, 1941
TaaI ACNGT 2 cut(s) 1862, 1969
TaiI ACGT 3 cut(s) 509, 1137, 1742
TasI AATT 3 cut(s) 222, 296, 1324
TatI WGTACW 1 cut(s) 384
TauI GCSGC 8 cut(s) 270, 293, 1040, 1517, 1531, 1537, 1870, 1993
TfiI GAWTC 8 cut(s) 604, 628, 692, 745, 828, 1153, 1471, 1952
Tru1I TTAA 1 cut(s) 719
Tru9I TTAA 1 cut(s) 719
TscAI CASTG 3 cut(s) 242, 655, 1653
TseFI GTSAC 1 cut(s) 1583
TseI GCWGC 9 cut(s) 17, 351, 1063, 1363, 1531, 1537, 1570, 1619, 1771
Tsp45I GTSAC 1 cut(s) 1583
TspDTI ATGAA 6 cut(s) 98, 606, 770, 1233, 1239, 1850
TspGWI ACGGA 2 cut(s) 1422, 1571
TspMI CCCGGG 1 cut(s) 262
TspRI CASTG 3 cut(s) 242, 655, 1653
Vha464I CTTAAG 1 cut(s) 718
VneI GTGCAC 2 cut(s) 1504, 1712
VpaK11BI GGWCC 4 cut(s) 341, 712, 1804, 1890
XapI RAATTY 1 cut(s) 296
XbaI TCTAGA 2 cut(s) 367, 674
XhoI CTCGAG 1 cut(s) 1067
XmaI CCCGGG 1 cut(s) 262
XmiI GTMKAC 1 cut(s) 1137
XmnI GAANNNNTTC 1 cut(s) 850
XspI CTAG 6 cut(s) 203, 368, 675, 749, 1077, 1274
ZraI GACGTC 1 cut(s) 1135
ZrmI AGTACT 1 cut(s) 386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.