Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0006338

Physical Location & Seq

Genomic Coordinates Reverse (-)

17777698 .. 17780074

Gene Structure 2377 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g23630.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGCTGCAGCAACGGCGGCGGCGGCGGCGGCATCTGAGAAATCAAGCTCCAAGGGCCAAGCATGGTTCTGCACCACTGGATTGCCAAGCGACATTGTCGTCCGAGTCGACGACATGACCTTCCATCTCCATAAGTTCCCTCTCATGTCGAAAAGTCGAAAGCTTCATAACCTAATCACAGAGGAAGAGACGAACCCATCAAACCCCCATCACCAAATGGACGACGACGACGACGAAATCGAACAAGTCCAGTGCCAAATATCCCTCTCTGACTTCCCCGGCGGCTCCGAGACCTTCGAGATCGCCGCCAAGTTCTGCTACGGAGTCAAGATCGACCTGAGCTCCTCCAACGTCGTGCCGTTGCGCTGCGCCGGGGAGTATTTGGATATGACGGAGGAGTACTCGGACGACAACCTCATTTCGAAGACCGAGAGGTTTCTCTCTCAGTCGGTGTTGAAAAGCTTTAAGGAGTCGCTCAGAGCTCTCAAGTCCTGCGAGCGAGTCATGCCTCTGGCGGAGAATTTGGGGATTACGCAGAGGTGCATAGACTCCGTCGCCTCCCGCGCCACGTCTGCCGATCCCTCCCTGTTTGGCTGGCCGGTTAGCAACGGTGGACCCAATCGGAATGCAAATGCGGATGCGGTTTCGGCTTCTTCTGCTTCAAAACAGCAGATTTTGTGGAATGGGATTGACGCCGGCGGCGGACGGAGAAGGACTAAACACGCCGATTCCTGGCTTGAAGACTTGGTGGTTTTGAGCTTGCCACTTTTCAAGCGGTTAATTTCCGCCATGAAATCTGGAGATCTGAGCTTGGAGATGGTGGAGACGTGCTTGATGCAGTACGCTAAGAAGTACATTCCTGGAATTTCAAGAACGAATAGAAAGCCTTCGTCTTCTACCTCCGCCGCCGCCGCCACTACTGCCGCCGAATCGTCGCGTTTAGCTTCGGAGAGTCAGCAGAGAGAGCTTTTGGAGACGATCATCTCCAATCTTCCATTGGAGAAGAGCTCCAGACCTTCGACGGCGACTCGATTCCTCTTCGGACTATTGCGAACCGCCAACATACTTAACGCCTCCGAAGCCTGCAAGGCCGCCTTGGAGAAGAAGATTGCCTCGCAGCTCCACCAAGCCACCTTAGACGACCTCCTCATCCCGAGCTACTCCTACCTGAACGAGACGCTCTACGACGTCGATTGCATCGAGAGAATCCTCGGTTACTTCTTGAACGGCTTGGATCAGGGAAATACCGCCAGCATCGAAGACGGTTCTGACGGCTCCGTCCGATCGCCGTCGCTGATGCTCGTCGGGAAATTGATAGATGAATTCCTTTCCGAGATCGCCTCCGATGCGAATCTTAAACCGGATCGGTTCTACAACCTCGCGATTTCTCTTCCTGATCAAGCTCGGCTCTTCGACGACGGCCTTTACAGAGCCGTCGATGTCTATCTCAAGGCGCATCCATGGCTATCGGAACCTGAGCGCGAGAAGGTCTGCGGAATTCTGGACTGCCAGAAGCTGACGCTTGAGGCGTGCACGCATGCGGCGCAGAACGAGCGATTGCCGCTGCGAGCGGTGGTGCAGGTTCTGTTTTTCGAGCAGCTCCAGCTCCGCCACGCCATCACCGGAACTCTTCATGCCGCCGACGTCGTTCCCCCGGAATCGTCCAGGCCATCGGTGCTGCGACGCGAAAGGGATGACGAGGAGGAGGAAGAGGGCGACGCGGCGGAGGCACGCAGGGATGAAAGTGGAGGCACGTGGCAGGCGGCGGTGAGGCAGAATCAGGTGTTGCGATTGGACATGGATAGCATGAGGACGCGGGTGCACCAGTTGGAGCGGGAATGCTCCAGCATGAAGAAAGTGATCGAGAAAATTGATAAGCCGGGCCAACCCGGAAGAGACGAGTCGGGTCGGAAGGACTCGTTGATCCGGAGGTTCGGGTGCAAGTTCAAGACCCAGGTGTGCGATTCGCACGAACGGACGGTCGTTGATACGAGAAAAGGACGACGGCGACACCATCACCAACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

676

Amino Acids

74.93

Weight (kDa)

5.77

Isoelectric Point (pI)

50.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006338)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66560 AT5G66560 AT5G66560 AT5G66560
fragaria_vesca	FvH4_1g14470 FvH4_1g14470 FvH4_1g14470 FvH4_1g14470 FvH4_1g14470
malus_domestica	MD02G1158300.v1.1 MD15G1273100.v1.1
prunus_persica	Prupe.7G145600_v2.0.a1 Prupe.7G145600_v2.0.a1 Prupe.7G145600_v2.0.a1 Prupe.7G145600_v2.0.a1
pyrus_communis	pycom02g12480 pycom15g23630
rosa_chinensis	RchiOBHm_Chr2g0103231
rosa_laevigata	RLG00000017216
rosa_multiflora	Rmu_sc0002218.1_g000002
rosa_roxburghii	Rroxscaffold_2G00139850
rosa_rugosa	Rorug02G0112500
rosa_samantha	Rh2AG161200 Rh2BG168000 Rh2CG168200 Rh2DG166900
rosa_wichuraiana	Rw2G012650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	98, 1277
AatII	GACGTC	2 cut(s)	1191, 1647
Acc36I	ACCTGC	1 cut(s)	1570
AccBSI	CCGCTC	2 cut(s)	1571, 1834
AccI	GTMKAC	1 cut(s)	108
AccII	CGCG	7 cut(s)	564, 937, 1382, 1482, 1686, 1721, 1816
AccIII	TCCGGA	1 cut(s)	1926
AclWI	GGATC	4 cut(s)	572, 1242, 1371, 1918
AcoI	YGGCCR	1 cut(s)	596
AcsI	RAATTY	4 cut(s)	520, 864, 1322, 1497
AcvI	CACGTG	1 cut(s)	1755
AcyI	GRCGYC	3 cut(s)	693, 1188, 1644
AfaI	GTAC	3 cut(s)	401, 842, 854
AfiI	CCNNNNNNNGG	1 cut(s)	732
AgsI	TTSAA	7 cut(s)	457, 663, 740, 772, 870, 1225, 1948
AjiI	CACGTC	2 cut(s)	570, 828
AjnI	CCWGG	4 cut(s)	731, 859, 1664, 1953
Alw21I	GWGCWC	5 cut(s)	344, 484, 1010, 1535, 1824
Alw26I	GTCTC	6 cut(s)	182, 284, 818, 968, 1169, 1890
Alw44I	GTGCAC	2 cut(s)	1531, 1820
AlwI	GGATC	4 cut(s)	572, 1242, 1371, 1918
AlwNI	CAGNNNCTG	2 cut(s)	1516, 1585
Ama87I	CYCGRG	1 cut(s)	1153
Aor13HI	TCCGGA	1 cut(s)	1926
AoxI	GGCC	6 cut(s)	55, 596, 1089, 1420, 1667, 1882
ApaLI	GTGCAC	2 cut(s)	1531, 1820
ApeKI	GCWGC	7 cut(s)	5, 8, 366, 1117, 1564, 1597, 1678
ApoI	RAATTY	4 cut(s)	520, 864, 1322, 1497
ArsI	GACNNNNNNTTYG	2 cut(s)	1965, 1997
Asp700I	GAANNNNTTC	1 cut(s)	886
AspLEI	GCGC	6 cut(s)	366, 371, 566, 1456, 1482, 1546
AspS9I	GGNCC	3 cut(s)	55, 614, 1882
AsuC2I	CCSGG	5 cut(s)	279, 373, 1655, 1881, 1890
AsuHPI	GGTGA	4 cut(s)	203, 1612, 1780, 2009
AsuII	TTCGAA	1 cut(s)	422
AvaI	CYCGRG	1 cut(s)	1153
AvaII	GGWCC	1 cut(s)	614
BaeGI	GKGCMC	2 cut(s)	1535, 1824
BanII	GRGCYC	3 cut(s)	344, 484, 1010
BbrPI	CACGTG	1 cut(s)	1755
BbsI	GAAGAC	4 cut(s)	431, 747, 885, 1266
Bbv12I	GWGCWC	5 cut(s)	344, 484, 1010, 1535, 1824
BbvI	GCAGC	6 cut(s)	20, 353, 1129, 1551, 1609, 1665
BccI	CCATC	7 cut(s)	132, 205, 216, 811, 1625, 1678, 2022
BceAI	ACGGC	9 cut(s)	30, 343, 1038, 1243, 1273, 1288, 1418, 1435, 2021
BciT130I	CCWGG	4 cut(s)	733, 861, 1666, 1955
BclI	TGATCA	1 cut(s)	1396
BcnI	CCSGG	5 cut(s)	279, 373, 1655, 1881, 1890
BcoDI	GTCTC	6 cut(s)	182, 284, 818, 968, 1169, 1890
BfmI	CTRYAG	1 cut(s)	6
BfuAI	ACCTGC	1 cut(s)	1570
BglI	GCCNNNNNGGC	1 cut(s)	1088
BglII	AGATCT	1 cut(s)	802
BmcAI	AGTACT	1 cut(s)	401
Bme1390I	CCNGG	9 cut(s)	279, 373, 733, 861, 1655, 1666, 1881, 1890, 1955
Bme18I	GGWCC	1 cut(s)	614
BmeT110I	CYCGRG	1 cut(s)	1153
BmgBI	CACGTC	2 cut(s)	570, 828
BmgT120I	GGNCC	3 cut(s)	55, 614, 1882
BmiI	GGNNCC	4 cut(s)	286, 616, 1276, 1473
BmrFI	CCNGG	9 cut(s)	279, 373, 733, 861, 1655, 1666, 1881, 1890, 1955
BmsI	GCATC	8 cut(s)	41, 628, 825, 1206, 1263, 1287, 1336, 1465
BpiI	GAAGAC	4 cut(s)	431, 747, 885, 1266
BplI	GAGNNNNNCTC	6 cut(s)	386, 418, 992, 1024, 1325, 1357
BpmI	CTGGAG	4 cut(s)	819, 994, 1586, 1828
Bpu10I	CCTNAGC	2 cut(s)	338, 1476
Bpu14I	TTCGAA	1 cut(s)	422
BpuEI	CTTGAG	3 cut(s)	470, 1433, 1544
BpuMI	CCSGG	5 cut(s)	279, 373, 1655, 1881, 1890
BsaAI	YACGTR	1 cut(s)	1755
BsaBI	GATNNNNATC	2 cut(s)	1350, 1443
BsaHI	GRCGYC	3 cut(s)	693, 1188, 1644
BsaI	GGTCTC	1 cut(s)	284
BsaJI	CCNNGG	8 cut(s)	51, 277, 372, 1095, 1210, 1460, 1653, 1953
BsaWI	WCCGGW	3 cut(s)	1360, 1622, 1926
BsaXI	ACNNNNNCTCC	2 cut(s)	326, 356
Bsc4I	CCNNNNNNNGG	1 cut(s)	732
Bse118I	RCCGGY	2 cut(s)	598, 695
Bse1I	ACTGG	3 cut(s)	82, 250, 1825
Bse8I	GATNNNNATC	2 cut(s)	1350, 1443
BseAI	TCCGGA	1 cut(s)	1926
BseBI	CCWGG	4 cut(s)	733, 861, 1666, 1955
BseDI	CCNNGG	8 cut(s)	51, 277, 372, 1095, 1210, 1460, 1653, 1953
BseGI	GGATG	5 cut(s)	643, 1149, 1456, 1699, 1744
BseJI	GATNNNNATC	2 cut(s)	1350, 1443
BseLI	CCNNNNNNNGG	1 cut(s)	732
BseMII	CTCAG	6 cut(s)	27, 329, 458, 490, 797, 1467
BseNI	ACTGG	3 cut(s)	82, 250, 1825
BseRI	GAGGAG	5 cut(s)	334, 410, 1136, 1715, 1718
BseSI	GKGCMC	2 cut(s)	1535, 1824
BseXI	GCAGC	6 cut(s)	20, 353, 1129, 1551, 1609, 1665
BsgI	GTGCAG	2 cut(s)	55, 1598
Bsh1236I	CGCG	7 cut(s)	564, 937, 1382, 1482, 1686, 1721, 1816
Bsh1285I	CGRYCG	2 cut(s)	1286, 1983
BshFI	GGCC	6 cut(s)	57, 598, 1091, 1422, 1669, 1884
BsiEI	CGRYCG	2 cut(s)	1286, 1983
BsiHKAI	GWGCWC	5 cut(s)	344, 484, 1010, 1535, 1824
BsiHKCI	CYCGRG	1 cut(s)	1153
BslI	CCNNNNNNNGG	1 cut(s)	732
BsmAI	GTCTC	6 cut(s)	182, 284, 818, 968, 1169, 1890
BsmBI	CGTCTC	5 cut(s)	182, 818, 968, 1169, 1890
BsmI	GAATGC	2 cut(s)	631, 1844
BsnI	GGCC	6 cut(s)	57, 598, 1091, 1422, 1669, 1884
Bso31I	GGTCTC	1 cut(s)	284
BsoBI	CYCGRG	1 cut(s)	1153
Bsp119I	TTCGAA	1 cut(s)	422
Bsp1286I	GDGCHC	5 cut(s)	344, 484, 1010, 1535, 1824
Bsp13I	TCCGGA	1 cut(s)	1926
Bsp19I	CCATGG	1 cut(s)	1460
Bsp68I	TCGCGA	1 cut(s)	1382
BspANI	GGCC	6 cut(s)	57, 598, 1091, 1422, 1669, 1884
BspCNI	CTCAG	6 cut(s)	28, 330, 457, 489, 798, 1468
BspEI	TCCGGA	1 cut(s)	1926
BspFNI	CGCG	7 cut(s)	564, 937, 1382, 1482, 1686, 1721, 1816
BspLI	GGNNCC	4 cut(s)	286, 616, 1276, 1473
BspMAI	CTGCAG	1 cut(s)	10
BspMI	ACCTGC	1 cut(s)	1570
BspPI	GGATC	4 cut(s)	572, 1242, 1371, 1918
BspQI	GCTCTTC	2 cut(s)	998, 1415
BspT104I	TTCGAA	1 cut(s)	422
BspTNI	GGTCTC	1 cut(s)	284
BsrBI	CCGCTC	2 cut(s)	1571, 1834
BsrFI	RCCGGY	2 cut(s)	598, 695
BsrI	ACTGG	3 cut(s)	82, 250, 1825
BssAI	RCCGGY	2 cut(s)	598, 695
BssECI	CCNNGG	8 cut(s)	51, 277, 372, 1095, 1210, 1460, 1653, 1953
BssNI	GRCGYC	3 cut(s)	693, 1188, 1644
BssT1I	CCWWGG	3 cut(s)	51, 1095, 1460
Bst2UI	CCWGG	4 cut(s)	733, 861, 1666, 1955
Bst4CI	ACNGT	4 cut(s)	611, 1265, 1981, 2025
Bst6I	CTCTTC	8 cut(s)	180, 998, 1043, 1395, 1415, 1635, 1704, 1888
BstACI	GRCGYC	3 cut(s)	693, 1188, 1644
BstBAI	YACGTR	1 cut(s)	1755
BstBI	TTCGAA	1 cut(s)	422
BstDEI	CTNAG	8 cut(s)	36, 338, 444, 476, 806, 846, 1135, 1476
BstDSI	CCRYGG	1 cut(s)	1460
BstF5I	GGATG	5 cut(s)	643, 1149, 1456, 1699, 1744
BstFNI	CGCG	7 cut(s)	564, 937, 1382, 1482, 1686, 1721, 1816
BstHHI	GCGC	6 cut(s)	366, 371, 566, 1456, 1482, 1546
BstMAI	GTCTC	6 cut(s)	182, 284, 818, 968, 1169, 1890
BstMCI	CGRYCG	2 cut(s)	1286, 1983
BstNI	CCWGG	4 cut(s)	733, 861, 1666, 1955
BstNSI	RCATGY	1 cut(s)	1541
BstSCI	CCNGG	9 cut(s)	277, 371, 731, 859, 1653, 1664, 1879, 1888, 1953
BstSFI	CTRYAG	1 cut(s)	6
BstSLI	GKGCMC	2 cut(s)	1535, 1824
BstUI	CGCG	7 cut(s)	564, 937, 1382, 1482, 1686, 1721, 1816
BstV1I	GCAGC	6 cut(s)	20, 353, 1129, 1551, 1609, 1665
BstV2I	GAAGAC	4 cut(s)	431, 747, 885, 1266
BstX2I	RGATCY	1 cut(s)	802
BstYI	RGATCY	1 cut(s)	802
BsuRI	GGCC	6 cut(s)	57, 598, 1091, 1422, 1669, 1884
BtgI	CCRYGG	1 cut(s)	1460
BtrI	CACGTC	2 cut(s)	570, 828
BtsCI	GGATG	5 cut(s)	643, 1149, 1456, 1699, 1744
BtsIMutI	CAGTG	2 cut(s)	75, 257
BtuMI	TCGCGA	1 cut(s)	1382
BveI	ACCTGC	1 cut(s)	1570
CaiI	CAGNNNCTG	2 cut(s)	1516, 1585
CfoI	GCGC	6 cut(s)	366, 371, 566, 1456, 1482, 1546
Cfr10I	RCCGGY	2 cut(s)	598, 695
Cfr13I	GGNCC	3 cut(s)	55, 614, 1882
CseI	GACGC	6 cut(s)	701, 1186, 1528, 1692, 1727, 1822
Csp6I	GTAC	3 cut(s)	400, 841, 853
CviQI	GTAC	3 cut(s)	400, 841, 853
DdeI	CTNAG	8 cut(s)	36, 338, 444, 476, 806, 846, 1135, 1476
DrdI	GACNNNNNNGTC	2 cut(s)	98, 1277
DseDI	GACNNNNNNGTC	2 cut(s)	98, 1277
EaeI	YGGCCR	1 cut(s)	596
Eam1104I	CTCTTC	8 cut(s)	180, 998, 1043, 1395, 1415, 1635, 1704, 1888
EarI	CTCTTC	8 cut(s)	180, 998, 1043, 1395, 1415, 1635, 1704, 1888
EciI	GGCGGA	6 cut(s)	530, 717, 775, 892, 1598, 1739
Ecl136II	GAGCTC	3 cut(s)	342, 482, 1008
Eco130I	CCWWGG	3 cut(s)	51, 1095, 1460
Eco24I	GRGCYC	3 cut(s)	344, 484, 1010
Eco31I	GGTCTC	1 cut(s)	284
Eco47I	GGWCC	1 cut(s)	614
Eco53kI	GAGCTC	3 cut(s)	342, 482, 1008
Eco72I	CACGTG	1 cut(s)	1755
Eco88I	CYCGRG	1 cut(s)	1153
EcoICRI	GAGCTC	3 cut(s)	342, 482, 1008
EcoRI	GAATTC	2 cut(s)	1322, 1497
EcoRII	CCWGG	4 cut(s)	731, 859, 1664, 1953
EcoT14I	CCWWGG	3 cut(s)	51, 1095, 1460
EcoT38I	GRGCYC	3 cut(s)	344, 484, 1010
ErhI	CCWWGG	3 cut(s)	51, 1095, 1460
Esp3I	CGTCTC	5 cut(s)	182, 818, 968, 1169, 1890
FalI	AAGNNNNNCTT	2 cut(s)	1079, 1111
FauI	CCCGC	3 cut(s)	569, 1809, 1827
FbaI	TGATCA	1 cut(s)	1396
FblI	GTMKAC	1 cut(s)	108
FokI	GGATG	5 cut(s)	650, 1136, 1443, 1706, 1751
FriOI	GRGCYC	3 cut(s)	344, 484, 1010
GlaI	GCGC	6 cut(s)	365, 370, 565, 1455, 1481, 1545
GsuI	CTGGAG	4 cut(s)	819, 994, 1586, 1828
HaeIII	GGCC	6 cut(s)	57, 598, 1091, 1422, 1669, 1884
HgaI	GACGC	6 cut(s)	701, 1186, 1528, 1692, 1727, 1822
HhaI	GCGC	6 cut(s)	366, 371, 566, 1456, 1482, 1546
Hin1I	GRCGYC	3 cut(s)	693, 1188, 1644
Hin6I	GCGC	6 cut(s)	364, 369, 564, 1454, 1480, 1544
HinP1I	GCGC	6 cut(s)	364, 369, 564, 1454, 1480, 1544
HincII	GTYRAC	1 cut(s)	109
HindII	GTYRAC	1 cut(s)	109
HindIII	AAGCTT	2 cut(s)	161, 460
HphI	GGTGA	4 cut(s)	203, 1612, 1780, 2009
Hpy166II	GTNNAC	4 cut(s)	109, 614, 1533, 1822
Hpy8I	GTNNAC	4 cut(s)	109, 614, 1533, 1822
HpyAV	CCTTC	7 cut(s)	130, 304, 705, 897, 1026, 1480, 1906
HpyCH4III	ACNGT	4 cut(s)	611, 1265, 1981, 2025
HpyCH4IV	ACGT	6 cut(s)	351, 569, 827, 1188, 1644, 1754
HpyF3I	CTNAG	8 cut(s)	36, 338, 444, 476, 806, 846, 1135, 1476
HpySE526I	ACGT	6 cut(s)	351, 569, 827, 1188, 1644, 1754
Hsp92I	GRCGYC	3 cut(s)	693, 1188, 1644
HspAI	GCGC	6 cut(s)	364, 369, 564, 1454, 1480, 1544
Kpn2I	TCCGGA	1 cut(s)	1926
KroI	GCCGGC	1 cut(s)	695
KroNI	GCCGGC	1 cut(s)	697
Ksp22I	TGATCA	1 cut(s)	1396
LguI	GCTCTTC	2 cut(s)	998, 1415
Lsp1109I	GCAGC	6 cut(s)	20, 353, 1129, 1551, 1609, 1665
LweI	GCATC	8 cut(s)	41, 628, 825, 1206, 1263, 1287, 1336, 1465
MaeII	ACGT	6 cut(s)	351, 569, 827, 1188, 1644, 1754
MaeIII	GTNAC	1 cut(s)	1214
MbiI	CCGCTC	2 cut(s)	1571, 1834
MflI	RGATCY	1 cut(s)	802
MhlI	GDGCHC	5 cut(s)	344, 484, 1010, 1535, 1824
MluCI	AATT	7 cut(s)	520, 780, 864, 1310, 1322, 1497, 1869
MlyI	GAGTC	9 cut(s)	114, 333, 479, 510, 542, 961, 1021, 1910, 1910
MmeI	TCCRAC	3 cut(s)	372, 1809, 1889
MreI	CGCCGGCG	1 cut(s)	695
MroI	TCCGGA	1 cut(s)	1926
MroNI	GCCGGC	1 cut(s)	695
MroXI	GAANNNNTTC	1 cut(s)	886
MseI	TTAA	4 cut(s)	465, 779, 1068, 1356
MspA1I	CMGCKG	1 cut(s)	1564
MspR9I	CCNGG	9 cut(s)	279, 373, 733, 861, 1655, 1666, 1881, 1890, 1955
MteI	GCGCNGCGC	1 cut(s)	367
Mva1269I	GAATGC	2 cut(s)	631, 1844
MvaI	CCWGG	4 cut(s)	733, 861, 1666, 1955
MvnI	CGCG	7 cut(s)	564, 937, 1382, 1482, 1686, 1721, 1816
NaeI	GCCGGC	1 cut(s)	697
NciI	CCSGG	5 cut(s)	279, 373, 1655, 1881, 1890
NcoI	CCATGG	1 cut(s)	1460
NgoMIV	GCCGGC	1 cut(s)	695
NlaIV	GGNNCC	4 cut(s)	286, 616, 1276, 1473
NmeAIII	GCCGAG	1 cut(s)	1384
NruI	TCGCGA	1 cut(s)	1382
NspI	RCATGY	1 cut(s)	1541
NspV	TTCGAA	1 cut(s)	422
PaeI	GCATGC	1 cut(s)	1541
PciSI	GCTCTTC	2 cut(s)	998, 1415
PcsI	WCGNNNNNNNCGW	6 cut(s)	105, 228, 231, 237, 1197, 1526
PctI	GAATGC	2 cut(s)	631, 1844
PdiI	GCCGGC	1 cut(s)	697
PdmI	GAANNNNTTC	1 cut(s)	886
PfeI	GAWTC	8 cut(s)	728, 929, 1032, 1206, 1351, 1658, 1777, 1964
PflFI	GACNNNGTC	2 cut(s)	95, 551
PfoI	TCCNGGA	1 cut(s)	859
Ple19I	CGATCG	1 cut(s)	1286
PleI	GAGTC	9 cut(s)	113, 332, 478, 509, 542, 960, 1021, 1909, 1910
PmaCI	CACGTG	1 cut(s)	1755
PmlI	CACGTG	1 cut(s)	1755
PpsI	GAGTC	9 cut(s)	113, 332, 478, 509, 542, 960, 1021, 1909, 1910
Ppu21I	YACGTR	1 cut(s)	1755
Psp124BI	GAGCTC	3 cut(s)	344, 484, 1010
Psp6I	CCWGG	4 cut(s)	731, 859, 1664, 1953
PspCI	CACGTG	1 cut(s)	1755
PspGI	CCWGG	4 cut(s)	731, 859, 1664, 1953
PspN4I	GGNNCC	4 cut(s)	286, 616, 1276, 1473
PspPI	GGNCC	3 cut(s)	55, 614, 1882
PstI	CTGCAG	1 cut(s)	10
PstNI	CAGNNNCTG	2 cut(s)	1516, 1585
PsuI	RGATCY	1 cut(s)	802
PsyI	GACNNNGTC	2 cut(s)	95, 551
PvuI	CGATCG	1 cut(s)	1286
RruI	TCGCGA	1 cut(s)	1382
RsaI	GTAC	3 cut(s)	401, 842, 854
RsaNI	GTAC	3 cut(s)	400, 841, 853
SacI	GAGCTC	3 cut(s)	344, 484, 1010
SalI	GTCGAC	1 cut(s)	107
SapI	GCTCTTC	2 cut(s)	998, 1415
SaqAI	TTAA	4 cut(s)	465, 779, 1068, 1356
Sau96I	GGNCC	3 cut(s)	55, 614, 1882
ScaI	AGTACT	1 cut(s)	401
SchI	GAGTC	9 cut(s)	114, 333, 479, 510, 542, 961, 1021, 1910, 1910
ScrFI	CCNGG	9 cut(s)	279, 373, 733, 861, 1655, 1666, 1881, 1890, 1955
SduI	GDGCHC	5 cut(s)	344, 484, 1010, 1535, 1824
SfaNI	GCATC	8 cut(s)	41, 628, 825, 1206, 1263, 1287, 1336, 1465
SfcI	CTRYAG	1 cut(s)	6
SfuI	TTCGAA	1 cut(s)	422
SgrAI	CRCCGGYG	1 cut(s)	695
SinI	GGWCC	1 cut(s)	614
SmlI	CTYRAG	3 cut(s)	485, 1448, 1523
SmoI	CTYRAG	3 cut(s)	485, 1448, 1523
SphI	GCATGC	1 cut(s)	1541
Sse9I	AATT	7 cut(s)	520, 780, 864, 1310, 1322, 1497, 1869
SstI	GAGCTC	3 cut(s)	344, 484, 1010
StyD4I	CCNGG	9 cut(s)	277, 371, 731, 859, 1653, 1664, 1879, 1888, 1953
StyI	CCWWGG	3 cut(s)	51, 1095, 1460
TaaI	ACNGT	4 cut(s)	611, 1265, 1981, 2025
TaiI	ACGT	6 cut(s)	354, 572, 830, 1191, 1647, 1757
TaqII	GACCGA	1 cut(s)	443
TasI	AATT	7 cut(s)	520, 780, 864, 1310, 1322, 1497, 1869
TatI	WGTACW	2 cut(s)	399, 852
TfiI	GAWTC	8 cut(s)	728, 929, 1032, 1206, 1351, 1658, 1777, 1964
Tru1I	TTAA	4 cut(s)	465, 779, 1068, 1356
Tru9I	TTAA	4 cut(s)	465, 779, 1068, 1356
TscAI	CASTG	2 cut(s)	82, 257
TseI	GCWGC	7 cut(s)	5, 8, 366, 1117, 1564, 1597, 1678
TspDTI	ATGAA	6 cut(s)	155, 806, 1335, 1622, 1755, 1865
TspGWI	ACGGA	6 cut(s)	336, 407, 541, 721, 1267, 1990
TspRI	CASTG	2 cut(s)	82, 257
Tth111I	GACNNNGTC	2 cut(s)	95, 551
VneI	GTGCAC	2 cut(s)	1531, 1820
VpaK11BI	GGWCC	1 cut(s)	614
XapI	RAATTY	4 cut(s)	520, 864, 1322, 1497
XceI	RCATGY	1 cut(s)	1541
XcmI	CCANNNNNNNNNTGG	1 cut(s)	994
XmiI	GTMKAC	1 cut(s)	108
XmnI	GAANNNNTTC	1 cut(s)	886
ZraI	GACGTC	2 cut(s)	1189, 1645
ZrmI	AGTACT	1 cut(s)	401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.